SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.


WWE domain superfamily domain assignments


No domain assignments for these genomes.


Add assignments from groups of genomes

View all assignments containing a WWE domain domain in each group of genomes.

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes ]


Add assignments from individual genomes

Select additional genomes you would like to see domain assignments for, then click 'Submit'.

Select to display   Genome       Domains   Proteins
No Yes ALL   22814 22814
No Yes Homo sapiens 76_38 Human 55 48
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 15 12
No Yes Gorilla gorilla 76_3.1 Western gorilla 23 18
No Yes Pongo abelii 76_2 Sumatran orangutan 17 13
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 17 13
No Yes Papio anubis 76 Olive baboon 19 14
No Yes Macaca mulatta 76_1 Rhesus monkey 22 17
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 30 24
No Yes Otolemur garnettii 76_3 Small-eared galago 15 12
No Yes Microcebus murinus 76_1 Gray mouse lemur 11 9
No Yes Rattus norvegicus 76_5.0 Norway rat 12 10
No Yes Mus musculus 76_38 House mouse 36 29
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 10 9
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 13 11
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 13 11
No Yes Cavia porcellus 76_3 Domestic guinea pig 13 11
No Yes Oryctolagus cuniculus 76_2 Rabbit 13 12
No Yes Ochotona princeps 76 American pika 11 9
No Yes Tupaia belangeri 76 Northern tree shrew 6 5
No Yes Sus scrofa 76_10.2 Pig 17 15
No Yes Bos taurus 76_3.1 Cattle 14 12
No Yes Ovis aries 76_3.1 Sheep 14 13
No Yes Vicugna pacos 76_1 Alpaca 7 7
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 13 11
No Yes Mustela putorius furo 76_1.0 Domestic ferret 13 11
No Yes Ailuropoda melanoleuca 76_1 Giant panda 15 13
No Yes Canis familiaris 76_3.1 Dog 21 18
No Yes Felis catus 76_6.2 Domestic cat 13 11
No Yes Equus caballus 76_2 Horse 15 14
No Yes Myotis lucifugus 76_2.0 Little brown bat 18 15
No Yes Pteropus vampyrus 76_1 Large flying fox 12 11
No Yes Sorex araneus 76_1 European shrew 8 7
No Yes Erinaceus europaeus 76 Western European hedgehog 9 7
No Yes Procavia capensis 76_1 Cape rock hyrax 7 6
No Yes Loxodonta africana 76_3 African savanna elephant 17 14
No Yes Echinops telfairi 76 Small Madagascar hedgehog 8 7
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 16 12
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 5 5
No Yes Macropus eugenii 76_1.0 Tammar wallaby 9 7
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 12 11
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 16 13
No Yes Ornithorhynchus anatinus 76_5 Platypus 12 10
No Yes Saccoglossus kowalevskii v3.0   38 32
No Yes Petromyzon marinus 76_7.0 Sea lamprey 10 10
No Yes Meleagris gallopavo 76_2 Turkey 12 11
No Yes Gallus gallus 76_4 Chicken 12 10
No Yes Anas platyrhynchos 76_1.0 Mallard 14 12
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 9 8
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 13 11
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 18 16
No Yes Anolis carolinensis 76_2.0 Green anole 17 15
No Yes Xenopus laevis African clawed frog 29 20
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 24 20
No Yes Latimeria chalumnae 76_1 Coelacanth 29 21
No Yes Lepisosteus oculatus 76 Spotted gar 32 27
No Yes Gadus morhua 76_1 Atlantic cod 33 29
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 12 10
No Yes Takifugu rubripes 76_4 Torafugu 53 37
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 27 20
No Yes Oryzias latipes 76_1 Japanese medaka 24 19
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 24 18
No Yes Poecilia formosa 76 Amazon molly 28 21
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 35 26
No Yes Astyanax mexicanus 76 Mexican tetra 31 25
No Yes Danio rerio 76_9 Zebrafish 31 25
No Yes Oikopleura dioica   4 4
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 5 4
No Yes Ciona intestinalis 76 Vase tunicate 6 6
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 7 6
No Yes Adineta vaga   49 43
No Yes Octopus bimaculoides 280   5 4
No Yes Crassostrea gigas 22 Pacific oyster 30 29
No Yes Lottia gigantea Owl limpet 8 6
No Yes Helobdella robusta   6 6
No Yes Capitella sp. I   11 10
No Yes Danaus plexippus OGS1.0 Monarch butterfly 3 3
No Yes Heliconius melpomene Postman butterfly 3 3
No Yes Bombyx mori Domestic silkworm 2 2
No Yes Nasonia vitripennis Jewel wasp 4 3
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 5 4
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 6 5
No Yes Linepithema humile v1.1 Argentine ant 7 5
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 7 5
No Yes Solenopsis invicta v.2.2.3 Red fire ant 6 4
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 6 5
No Yes Atta cephalotes v1.1   5 4
No Yes Camponotus floridanus v3.3 Florida carpenter ant 6 4
No Yes Lucilia cuprina Australian sheep blowfly 6 3
No Yes Drosophila grimshawi 1.3   6 4
No Yes Drosophila willistoni 1.3   6 5
No Yes Drosophila pseudoobscura 2.13   7 6
No Yes Drosophila persimilis 1.3   6 5
No Yes Drosophila suzukii   8 5
No Yes Drosophila yakuba 1.3   9 6
No Yes Drosophila simulans 1.3   5 3
No Yes Drosophila sechellia 1.3   5 4
No Yes Drosophila melanogaster 76_5 Fruit fly 17 16
No Yes Drosophila erecta 1.3   5 4
No Yes Drosophila ananassae 1.3   6 5
No Yes Drosophila virilis 1.2   4 3
No Yes Drosophila mojavensis 1.3   7 4
No Yes Megaselia scalaris 22   3 3
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 3 2
No Yes Culex pipiens quinquefasciatus Southern house mosquito 3 3
No Yes Anopheles darlingi 22 American malaria mosquito 1 1
No Yes Anopheles gambiae 49_3j African malaria mosquito 4 3
No Yes Tribolium castaneum 3.0 Red flour beetle 6 4
No Yes Pediculus humanus corporis (Early assembly) Human body louse 5 4
No Yes Acyrthosiphon pisum Pea aphid 5 4
No Yes Rhodnius prolixus 22   4 3
No Yes Daphnia pulex Common water flea 5 4
No Yes Strigamia maritima 22   7 5
No Yes Sarcoptes scabiei   3 3
No Yes Tetranychus urticae Two-spotted spider mite 6 6
No Yes Ixodes scapularis (Preliminary) Black-legged tick 4 3
No Yes Pristionchus pacificus   3 3
No Yes Meloidogyne incognita Southern root-knot nematode 3 2
No Yes Meloidogyne hapla   1 1
No Yes Onchocerca volvulus 22   5 4
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 10 9
No Yes Caenorhabditis japonica   3 2
No Yes Caenorhabditis brenneri   6 5
No Yes Caenorhabditis remanei   6 5
No Yes Caenorhabditis elegans 76_235 Roundworm 6 5
No Yes Caenorhabditis briggsae 2   13 10
No Yes Trichinella spiralis 22   3 3
No Yes Hymenolepis microstoma   1 1
No Yes Echinococcus multilocularis   1 1
No Yes Echinococcus granulosus   1 1
No Yes Taenia solium Pork tapeworm 1 1
No Yes Schistosoma mansoni   2 2
No Yes Mnemiopsis leidyi Sea walnut 7 5
No Yes Acropora digitifera v1.0   29 25
No Yes Nematostella vectensis 1.0 Starlet sea anemone 6 6
No Yes Hydra vulgaris   5 5
No Yes Amphimedon queenslandica   25 24
No Yes Trichoplax adhaerens   4 4
No Yes Proterospongia sp. ATCC 50818   8 8
No Yes Monosiga brevicollis   3 3
No Yes Sphaeroforma arctica JP610   1 1
No Yes Capsaspora owczarzaki ATCC 30864   3 2
No Yes Phycomyces blakesleeanus   2 2
No Yes Rhizopus oryzae RA 99-880   4 4
No Yes Rhizomucor miehei CAU432   1 1
No Yes Candida lusitaniae ATCC 42720   1 1
No Yes Spizellomyces punctatus DAOM BR117   1 1
No Yes Dictyostelium discoideum   11 7
No Yes Dictyostelium purpureum   12 7
No Yes Entamoeba dispar 1.2   6 5
No Yes Entamoeba invadens 1.2   5 4
No Yes Entamoeba histolytica 1   6 5
No Yes Selaginella moellendorffii   2 2
No Yes Pinus taeda Loblolly pine 7 4
No Yes Picea abies Norway spruce 5 5
No Yes Theobroma cacao B97-61/B2 v1 Cacao 1 1
No Yes Gossypium raimondii v221   4 4
No Yes Medicago truncatula Barrel medic 3 3
No Yes Cucumis sativus v122 Cucumber 2 2
No Yes Manihot esculenta v147 Cassava 4 4
No Yes Populus trichocarpa v156 Black cottonwood 2 2
No Yes Mimulus guttatus v140 Spotted monkey flower 1 1
No Yes Solanum lycopersicum v.2.3 Tomato 2 2
No Yes Solanum tuberosum Potato 2 2
No Yes Actinidia chinensis Hongyang   1 1
No Yes Triticum urartu 22   1 1
No Yes Triticum aestivum 22 Bread wheat 2 2
No Yes Musa balbisiana Balbis banana 1 1
No Yes Musa acuminata 22 Wild Malaysian banana 1 1
No Yes Amborella trichopoda 22   2 2
No Yes Physcomitrella patens   2 1
No Yes Thecamonas trahens ATCC 50062   5 4
No Yes Bigelowiella natans CCMP2755 22   27 21
No Yes Leishmania mexicana 2.4   1 1
No Yes Leishmania major strain Friedlin   1 1
No Yes Leishmania infantum JPCM5 2.4   1 1
No Yes Leishmania braziliensis MHOM/BR/75/M2904 2.4   1 1
No Yes Trypanosoma vivax   1 1
No Yes Trypanosoma cruzi strain CL Brener   1 1
No Yes Trypanosoma congolense 2.4   2 2
No Yes Trypanosoma brucei gambiense v4.1   1 1
No Yes Trypanosoma brucei TREU927 v4.1   1 1
No Yes Ectocarpus siliculosus   3 3
No Yes Aureococcus anophagefferens   6 4
No Yes Fragilariopsis cylindrus   2 2
No Yes Perkinsus marinus ATCC 50983   2 2
No Yes Paramecium tetraurelia   7 4
No Yes Tetrahymena thermophila SB210 1   3 2
No Yes Cryptosporidium hominis   2 2
No Yes Cryptosporidium muris   2 2
No Yes Cryptosporidium parvum Iowa II   2 2
No Yes Neospora caninum   2 1
No Yes Toxoplasma gondii VEG   1 1
No Yes Toxoplasma gondii ME49   1 1
No Yes Toxoplasma gondii GT1   1 1
No Yes Plasmodium vivax SaI-1 7.0   1 1
No Yes Plasmodium knowlesi strain H   1 1
No Yes Plasmodium chabaudi   1 1
No Yes Plasmodium berghei ANKA   1 1
No Yes Symbiodinium minutum clade B1 v1.2   48 46
No Yes Naegleria gruberi   5 4
No Yes Guillardia theta CCMP2712 v1.0   9 8
No Yes Emiliania huxleyi CCMP1516   21 21
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 33 27
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 18 16
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 4 3
No Yes Ascaris suum Victoria/Ghent Pig roundworm 4 3
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 5 4
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 1 1
No Yes Trypanosoma brucei Lister 427 v4.1   1 1
No Yes Neospora caninum Nc-Liverpool 6.2   2 1
No Yes Homo sapiens 75_37 (old version GRC) Human 59 51
No Yes Homo sapiens (NCBI version) Human 33 27
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 14 11
No Yes Heliconius numata (Incomplete)   2 2
No Yes Loa loa v3.3 (Request) Eye worm 5 4
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 6 5
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 6 5
No Yes Picea sitchensis (Incomplete) Sitka spruce 4 3
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   1 1
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 1 1
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 2 2
No Yes Phoenix dactylifera (Early draft) Date palm 1 1
No Yes Homo sapiens 69_37 Human 14 11
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 14 11
No Yes Gorilla gorilla 69_3.1 Western gorilla 15 12
No Yes Pongo abelii 69_2 Sumatran orangutan 15 12
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 14 11
No Yes Macaca mulatta 69_1 Rhesus monkey 14 11
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 14 11
No Yes Otolemur garnettii 69_3 Small-eared galago 15 12
No Yes Microcebus murinus 69_1 Gray mouse lemur 11 9
No Yes Rattus norvegicus 69_3.4 Norway rat 11 10
No Yes Mus musculus 69_38 House mouse 14 11
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 10 9
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 12 10
No Yes Cavia porcellus 69_3 Domestic guinea pig 13 11
No Yes Oryctolagus cuniculus 69_2 Rabbit 12 11
No Yes Ochotona princeps 69 American pika 11 9
No Yes Tupaia belangeri 69 Northern tree shrew 6 5
No Yes Sus scrofa 69_10.2 Pig 14 12
No Yes Bos taurus 69_3.1 Cattle 14 12
No Yes Vicugna pacos 69_1 Alpaca 7 7
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 13 11
No Yes Mustela putorius furo 69_1.0 Domestic ferret 12 10
No Yes Ailuropoda melanoleuca 69_1 Giant panda 13 11
No Yes Canis familiaris 69_3.1 Dog 11 10
No Yes Felis catus 69 Domestic cat 8 7
No Yes Equus caballus 69_2 Horse 11 10
No Yes Myotis lucifugus 69_2.0 Little brown bat 18 15
No Yes Pteropus vampyrus 69_1 Large flying fox 12 11
No Yes Sorex araneus 69_1 European shrew 8 7
No Yes Erinaceus europaeus 69 Western European hedgehog 9 7
No Yes Procavia capensis 69_1 Cape rock hyrax 7 6
No Yes Loxodonta africana 69_3 African savanna elephant 14 11
No Yes Echinops telfairi 69 Small Madagascar hedgehog 8 7
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 6 6
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 5 5
No Yes Macropus eugenii 69_1.0 Tammar wallaby 9 7
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 11 10
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 16 13
No Yes Ornithorhynchus anatinus 69_5 Platypus 9 8
No Yes Petromyzon marinus 69_7.0 Sea lamprey 9 9
No Yes Meleagris gallopavo 69_2 Turkey 12 11
No Yes Gallus gallus 69_2 Chicken 10 9
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 9 8
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 15 13
No Yes Anolis carolinensis 69_2.0 Green anole 17 14
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 18 15
No Yes Latimeria chalumnae 69_1 Coelacanth 24 17
No Yes Gadus morhua 69_1 Atlantic cod 20 16
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 12 10
No Yes Takifugu rubripes 69_4 Torafugu 18 14
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 21 16
No Yes Oryzias latipes 69_1 Japanese medaka 22 17
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 24 18
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 26 19
No Yes Danio rerio 69_9 Zebrafish 24 18
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 4 3
No Yes Ciona intestinalis 69 Vase tunicate 5 5
No Yes Drosophila melanogaster 69_5 Fruit fly 5 4
No Yes Caenorhabditis elegans 69_215 Roundworm 5 4
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   1 1
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   1 1
No Yes NCBI 2017_08 genome   11531 9824
No Yes Protozoadb 2010_08 (Protozoadb)   46 42
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   533 438
No Yes Uniprot 2018_03 genome   5478 4637
No Yes Global Ocean Sampling Expedition (GOS)   38 32
No Yes NCBI viral sequences (Viral)   1 1
No Yes PDB chains (SCOP 1.75) (PDB)   3 2
No Yes Protein Data Bank (all PDB sequenc)   11 10
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   14 14
No Yes TargetDB (Targets)   29 22

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]