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WRKY DNA-binding domain superfamily domain assignments
in
Brachypodium distachyon

Assignment details

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Brachypodium distachyon has 105 significant domains in 87 proteins.

     

Sequence ID   Evalue   Region   Family  
EG:BRADI1G02327.1   1.57e-24   115-176   WRKY DNA-binding domain  
  1.96e-22   270-330   WRKY DNA-binding domain  
EG:BRADI1G07970.1   1.96e-27   316-383   WRKY DNA-binding domain  
  9.94e-23   190-249   WRKY DNA-binding domain  
EG:BRADI1G08106.1   1.57e-28   121-188   WRKY DNA-binding domain  
EG:BRADI1G08106.2   1.57e-28   121-188   WRKY DNA-binding domain  
EG:BRADI1G09170.1   1.7e-26   353-414   WRKY DNA-binding domain  
EG:BRADI1G13207.1   5.75e-21   37-100   WRKY DNA-binding domain  
EG:BRADI1G14300.1   2.75e-27   272-333   WRKY DNA-binding domain  
EG:BRADI1G14300.2   2.75e-27   272-333   WRKY DNA-binding domain  
EG:BRADI1G14300.3   2.35e-27   271-332   WRKY DNA-binding domain  
EG:BRADI1G16120.1   1.83e-28   366-434   WRKY DNA-binding domain  
  2.88e-24   203-264   WRKY DNA-binding domain  
EG:BRADI1G17660.1   5.75e-24   122-190   WRKY DNA-binding domain  
EG:BRADI1G22680.1   5.23e-28   334-401   WRKY DNA-binding domain  
  5.49e-22   175-234   WRKY DNA-binding domain  
EG:BRADI1G23340.1   1.19e-29   392-460   WRKY DNA-binding domain  
  1.18e-24   224-285   WRKY DNA-binding domain  
EG:BRADI1G23340.2   9.81e-30   316-384   WRKY DNA-binding domain  
  9.81e-25   148-209   WRKY DNA-binding domain  
EG:BRADI1G30870.1   4.71e-25   184-246   WRKY DNA-binding domain  
EG:BRADI1G47690.1   1.44e-24   115-176   WRKY DNA-binding domain  
  0.00000942   267-292   WRKY DNA-binding domain  
EG:BRADI1G48770.1   3.92e-24   110-174   WRKY DNA-binding domain  
EG:BRADI1G51030.1   5.23e-19   260-344   WRKY DNA-binding domain  
EG:BRADI1G59180.1   2.09e-28   114-180   WRKY DNA-binding domain  
EG:BRADI1G63220.1   4.32e-24   110-173   WRKY DNA-binding domain  
EG:BRADI1G63910.1   6.93e-22   26-94   WRKY DNA-binding domain  
EG:BRADI1G63910.2   5.49e-22   4-72   WRKY DNA-binding domain  
EG:BRADI2G00280.1   7.06e-29   272-340   WRKY DNA-binding domain  
  1.7e-25   138-200   WRKY DNA-binding domain  
EG:BRADI2G05234.1   3.27e-28   141-208   WRKY DNA-binding domain  
EG:BRADI2G05500.1   4.97e-27   254-322   WRKY DNA-binding domain  
EG:BRADI2G05510.1   1.44e-26   141-208   WRKY DNA-binding domain  
EG:BRADI2G08620.1   9.81e-28   354-422   WRKY DNA-binding domain  
EG:BRADI2G11170.1   1.26e-27   222-290   WRKY DNA-binding domain  
EG:BRADI2G15360.1   1.22e-28   153-220   WRKY DNA-binding domain  
EG:BRADI2G15405.1   3.79e-23   166-227   WRKY DNA-binding domain  
EG:BRADI2G15877.1   7.06e-25   91-158   WRKY DNA-binding domain  
EG:BRADI2G16150.1   9.29e-28   317-385   WRKY DNA-binding domain  
EG:BRADI2G16357.1   5.1e-29   199-267   WRKY DNA-binding domain  
EG:BRADI2G18530.1   7.72e-28   148-216   WRKY DNA-binding domain  
EG:BRADI2G19070.1   1.7e-28   151-218   WRKY DNA-binding domain  
EG:BRADI2G22230.1   1.83e-20   132-199   WRKY DNA-binding domain  
EG:BRADI2G22440.1   2.75e-29   338-406   WRKY DNA-binding domain  
  2.09e-24   180-242   WRKY DNA-binding domain  
EG:BRADI2G30695.1   1.7e-22   101-173   WRKY DNA-binding domain  
EG:BRADI2G30800.1   3.53e-24   154-217   WRKY DNA-binding domain  
EG:BRADI2G33540.1   1.7e-26   90-154   WRKY DNA-binding domain  
EG:BRADI2G44035.1   2.48e-24   177-240   WRKY DNA-binding domain  
EG:BRADI2G44090.1   6.8e-29   188-255   WRKY DNA-binding domain  
EG:BRADI2G44270.1   2.75e-23   98-163   WRKY DNA-binding domain  
EG:BRADI2G45480.1   5.89e-24   129-196   WRKY DNA-binding domain  
EG:BRADI2G45900.1   1.96e-29   175-243   WRKY DNA-binding domain  
EG:BRADI2G48090.1   7.85e-27   124-191   WRKY DNA-binding domain  
EG:BRADI2G48907.1   1.07e-25   61-122   WRKY DNA-binding domain  
EG:BRADI2G49020.1   2.75e-28   135-202   WRKY DNA-binding domain  
EG:BRADI2G49906.1   1.27e-25   83-145   WRKY DNA-binding domain  
EG:BRADI2G53480.1   0.00000000235   43-71   WRKY DNA-binding domain  
EG:BRADI2G53495.1   6.28e-21   59-129   WRKY DNA-binding domain  
EG:BRADI2G53500.1   2.62e-19   119-188   WRKY DNA-binding domain  
EG:BRADI2G53510.1   1.83e-19   36-107   WRKY DNA-binding domain  
EG:BRADI2G53520.1   3.66e-23   105-171   WRKY DNA-binding domain  
EG:BRADI2G53760.1   3.14e-29   389-457   WRKY DNA-binding domain  
  2.88e-24   222-287   WRKY DNA-binding domain  
EG:BRADI2G54720.1   0.00000000000837   107-149   WRKY DNA-binding domain  
EG:BRADI2G62130.1   0.0000000235   138-161   WRKY DNA-binding domain  
EG:BRADI3G06070.1   1.57e-25   184-246   WRKY DNA-binding domain  
EG:BRADI3G09810.1   1.7e-25   164-228   WRKY DNA-binding domain  
EG:BRADI3G18580.1   8.11e-26   235-297   WRKY DNA-binding domain  
EG:BRADI3G19640.1   1.31e-27   423-488   WRKY DNA-binding domain  
  1.57e-22   251-316   WRKY DNA-binding domain  
EG:BRADI3G34567.1   1.31e-26   178-242   WRKY DNA-binding domain  
EG:BRADI3G34850.1   1.16e-24   117-179   WRKY DNA-binding domain  
EG:BRADI3G39340.1   1.57e-29   364-432   WRKY DNA-binding domain  
  1.83e-26   252-314   WRKY DNA-binding domain  
EG:BRADI3G50360.1   1.07e-27   147-213   WRKY DNA-binding domain  
EG:BRADI3G52420.1   2.88e-26   223-286   WRKY DNA-binding domain  
EG:BRADI3G57710.1   1.7e-27   323-391   WRKY DNA-binding domain  
EG:BRADI4G01950.1   2.09e-29   307-375   WRKY DNA-binding domain  
  2.09e-25   156-219   WRKY DNA-binding domain  
EG:BRADI4G02680.1   1.83e-26   283-345   WRKY DNA-binding domain  
EG:BRADI4G06690.1   2.88e-29   378-446   WRKY DNA-binding domain  
  5.1e-25   228-288   WRKY DNA-binding domain  
EG:BRADI4G09890.1   2.88e-24   685-749   WRKY DNA-binding domain  
  4.97e-22   831-895   WRKY DNA-binding domain  
EG:BRADI4G19060.1   6.28e-30   108-175   WRKY DNA-binding domain  
EG:BRADI4G25717.1   1.57e-22   43-113   WRKY DNA-binding domain  
EG:BRADI4G28280.1   2.48e-24   111-174   WRKY DNA-binding domain  
EG:BRADI4G30360.1   1.26e-24   176-240   WRKY DNA-binding domain  
EG:BRADI4G30370.1   1.57e-16   99-143   WRKY DNA-binding domain  
EG:BRADI4G33370.1   7.32e-29   496-564   WRKY DNA-binding domain  
  4.71e-23   283-344   WRKY DNA-binding domain  
EG:BRADI4G44342.1   9.29e-19   114-193   WRKY DNA-binding domain  
EG:BRADI4G44350.1   1.96e-17   124-198   WRKY DNA-binding domain  
EG:BRADI4G44360.1   1.96e-18   115-189   WRKY DNA-binding domain  
EG:BRADI4G44370.1   1.31e-21   103-181   WRKY DNA-binding domain  
EG:BRADI4G45290.1   1.57e-24   114-175   WRKY DNA-binding domain  
  1.96e-22   269-329   WRKY DNA-binding domain  
EG:BRADI5G04817.1   3.53e-25   233-294   WRKY DNA-binding domain  
EG:BRADI5G13090.1   7.72e-29   514-582   WRKY DNA-binding domain  
  2.48e-25   282-347   WRKY DNA-binding domain  
EG:BRADI5G17395.1   1.44e-28   109-175   WRKY DNA-binding domain  
EG:BRADI5G20290.1   2.48e-26   136-199   WRKY DNA-binding domain  
EG:BRADI5G20700.1   5.75e-26   220-281   WRKY DNA-binding domain  
 
Weak hits:
EG:BRADI2G02790.1   0.00126   88-131   WRKY DNA-binding domain  

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Select to display   Genome       Domains   Proteins
No Yes ALL   37276 37276
No Yes Meloidogyne hapla   2 2
No Yes Mortierella verticillata NRRL 6337   2 2
No Yes Phycomyces blakesleeanus   6 6
No Yes Rhizopus oryzae RA 99-880   6 6
No Yes Mucor circinelloides   4 4
No Yes Rhizomucor miehei CAU432   4 4
No Yes Dictyostelium discoideum   2 1
No Yes Dictyostelium purpureum   2 2
No Yes Selaginella moellendorffii   42 35
No Yes Pinus taeda Loblolly pine 104 90
No Yes Picea abies Norway spruce 55 50
No Yes Eucalyptus grandis v201 Rose gum 125 102
No Yes Theobroma cacao B97-61/B2 v1 Cacao 71 61
No Yes Gossypium raimondii v221   277 219
No Yes Citrus clementina v165   76 65
No Yes Citrus sinensis v154 Sweet orange 118 93
No Yes Thellungiella halophila v173   83 70
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 172 145
No Yes Capsella rubella v183   95 79
No Yes Arabidopsis lyrata Lyrate rockcress 92 80
No Yes Arabidopsis thaliana 10 Thale cress 111 91
No Yes Carica papaya Papaya 56 50
No Yes Medicago truncatula Barrel medic 168 140
No Yes Phaseolus vulgaris v186 French bean 115 97
No Yes Glycine max v109 Soybean 230 196
No Yes Cucumis sativus v122 Cucumber 109 88
No Yes Fragaria vesca Wild strawberry 76 62
No Yes Malus domestica v196 Apple 167 140
No Yes Prunus persica v139 Peach 71 61
No Yes Linum usitatissimum v200 Flax 140 108
No Yes Manihot esculenta v147 Cassava 129 111
No Yes Populus trichocarpa v156 Black cottonwood 145 117
No Yes Vitis vinifera Wine grape 70 59
No Yes Mimulus guttatus v140 Spotted monkey flower 76 64
No Yes Solanum lycopersicum v.2.3 Tomato 96 81
No Yes Solanum tuberosum Potato 153 130
No Yes Actinidia chinensis Hongyang   127 106
No Yes Aquilegia coerulea v195   90 57
No Yes Triticum urartu 22   98 86
No Yes Triticum aestivum 22 Bread wheat 200 169
No Yes Aegilops tauschii 22   106 92
No Yes Brachypodium distachyon Stiff brome 105 87
No Yes Oryza barthii 22 African wild rice 125 106
No Yes Oryza meridionalis 22   139 123
No Yes Oryza glumaepatula 22   135 118
No Yes Oryza glaberrima African rice 99 87
No Yes Oryza punctata 22   119 106
No Yes Oryza nivara 22   139 121
No Yes Oryza brachyantha 22 Malo sina 100 89
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 150 130
No Yes Oryza sativa v193 Rice 149 129
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 137 116
No Yes Panicum virgatum v202 Switchgrass 199 180
No Yes Setaria italica v164 Foxtail millet 127 113
No Yes Zea mays subsp. mays Maize 171 152
No Yes Zea mays v181 Maize 187 164
No Yes Sorghum bicolor Sorghum 103 93
No Yes Musa balbisiana Balbis banana 183 155
No Yes Musa acuminata 22 Wild Malaysian banana 179 153
No Yes Amborella trichopoda 22   39 33
No Yes Physcomitrella patens   40 37
No Yes Coccomyxa subellipsoidea sp. C-169 v2   2 1
No Yes Asterochloris sp. Cgr/DA1pho v1.0   3 3
No Yes Chlorella variabilis sp. NC64A   2 1
No Yes Chlorella vulgaris   1 1
No Yes Volvox carteri f. nagariensis   2 2
No Yes Volvox carteri v199   3 2
No Yes Chlamydomonas reinhardtii 4.0   2 1
No Yes Ostreococcus sp. RCC809   3 3
No Yes Ostreococcus lucimarinus CCE9901   2 2
No Yes Ostreococcus tauri   2 2
No Yes Bathycoccus prasinos   4 4
No Yes Micromonas sp. RCC299   2 2
No Yes Micromonas pusilla CCMP1545 v3.0   2 2
No Yes Thecamonas trahens ATCC 50062   2 2
No Yes Giardia lamblia 2.3   2 1
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 71 61
No Yes Hordeum vulgare 22 Domesticated barley 149 127
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 128 113
No Yes Picea sitchensis (Incomplete) Sitka spruce 1 1
No Yes Lotus japonicus (Early assembly)   83 72
No Yes Malus x domestica (Duplicate) Apple 167 140
No Yes Ricinus communis (Early assembly) Castor bean 69 58
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   166 137
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 92 78
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 96 81
No Yes Phoenix dactylifera (Early draft) Date palm 68 54
No Yes Arabidopsis thaliana 10 Thale cress 86 73
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   1 1
No Yes Endophytic microbiome from Rice (meta-genome)   2 2
No Yes NCBI 2017_08 genome   11127 9096
No Yes Protozoadb 2010_08 (Protozoadb)   4 2
No Yes STRING v9.0.5 (STRING)   865 744
No Yes Uniprot 2018_03 genome   14382 12097
No Yes Global Ocean Sampling Expedition (GOS)   5 5
No Yes PDB chains (SCOP 1.75) (PDB)   1 1
No Yes Protein Data Bank (all PDB sequenc)   5 5
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   11 11
No Yes TargetDB (Targets)   7 6

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