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FlgN-like family domain assignments
in
all genomes

Assignment details

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25 selected genomes have 25 significant domains in 25 proteins.

Showing genomes 1 to 25 of 41
  1 2   Next Last

Pseudomonas sp. TKP has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|568141838|ref|YP_008934423.1|   1.24e-29   0.0000818   2-130   2fup A:1-130  

Pseudomonas fulva 12-X has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|333901296|ref|YP_004475169.1|   1.7e-28   0.0000226   2-129   2fup A:1-130  
 
Weak hits:
gi|333901219|ref|YP_004475092.1|   3.27e-22   0.0028   9-133   2fup A:1-130  

Pseudomonas fluorescens SBW25 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|229592138|ref|YP_002874257.1|   3.92e-29   0.0000864   2-130   2fup A:1-130  

Pseudomonas mendocina ymp has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|146307877|ref|YP_001188342.1|   5.1e-30   0.0000148   1-129   2fup A:1-130  
 
Weak hits:
gi|146306311|ref|YP_001186776.1|   0.068   0.025   63-115   2fup A:1-130  
gi|146309425|ref|YP_001189890.1|   1.44e-22   0.0045   15-134   2fup A:1-130  

Pseudomonas aeruginosa UCBPP-PA14 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|116051367|ref|YP_789800.1|   3.01e-29   0.000000398   6-130   2fup A:1-130  
 
Weak hits:
gi|116051914|ref|YP_789243.1|   0.0745   0.024   88-132   2fup A:1-130  
gi|116054359|ref|YP_788804.1|   0.0549   0.019   47-94   2fup A:1-130  

Pseudomonas denitrificans ATCC 13867 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|472324917|ref|YP_007657163.1|   8.5e-28   0.00000867   2-127   2fup A:1-130  

Pseudomonas stutzeri CCUG 29243 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|392420550|ref|YP_006457154.1|   3.53e-23   0.0000818   3-129   2fup A:1-130  
 
Weak hits:
gi|392421982|ref|YP_006458586.1|   0.0732   0.024   65-105   2fup A:1-130  

Pseudomonas stutzeri DSM 10701 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|397686376|ref|YP_006523695.1|   6.41e-26   0.0001   3-129   2fup A:1-130  
 
Weak hits:
gi|397685310|ref|YP_006522629.1|   7.19e-25   0.0024   13-132   2fup A:1-130  
gi|397686584|ref|YP_006523903.1|   0.0418   0.017   5-47   2fup A:1-130  
gi|397688718|ref|YP_006526037.1|   0.0262   0.01   3-39   2fup A:1-130  

Pseudomonas stutzeri RCH2 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|431928072|ref|YP_007241106.1|   8.37e-25   0.0000803   4-129   2fup A:1-130  
 
Weak hits:
gi|431926797|ref|YP_007239831.1|   0.0051   0.03   61-114   2fup A:1-130  
gi|431929232|ref|YP_007242266.1|   9.81e-23   0.0027   14-132   2fup A:1-130  

Pseudomonas poae RE*1-1-14 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|447917941|ref|YP_007398509.1|   1.28e-28   0.0000803   2-130   2fup A:1-130  

Pseudomonas fluorescens A506 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|387895179|ref|YP_006325476.1|   1.27e-28   0.0000833   3-130   2fup A:1-130  

Pseudomonas fluorescens R124 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
fid|94018210|locus|VBIPseFlu147482_4019|   2.09e-27   0.0000848   1-128   2fup A:1-130  

Pseudomonas fluorescens Pf0-1 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|77460477|ref|YP_349984.1|   2.35e-27   0.0000948   1-128   2fup A:1-130  

Pseudomonas resinovorans NBRC 106553 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|512619705|ref|YP_008104389.1|   5.62e-31   0.0000109   3-129   2fup A:1-130  
 
Weak hits:
gi|512619860|ref|YP_008104544.1|   8.24e-24   0.005   15-133   2fup A:1-130  

Pseudomonas mendocina NK-01 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|330502726|ref|YP_004379595.1|   2.48e-29   0.0000136   1-129   2fup A:1-130  
 
Weak hits:
gi|330502373|ref|YP_004379242.1|   0.00929   0.017   87-145   2fup A:1-130  
gi|330505655|ref|YP_004382524.1|   2.48e-22   0.0041   12-134   2fup A:1-130  

Pseudomonas aeruginosa SCV20265 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|568308433|ref|YP_008980702.1|   3.01e-29   0.000000398   6-130   2fup A:1-130  
 
Weak hits:
gi|568307386|ref|YP_008979655.1|   0.0549   0.019   47-94   2fup A:1-130  
gi|568307858|ref|YP_008980127.1|   0.0745   0.024   88-132   2fup A:1-130  

Pseudomonas aeruginosa MTB-1 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|564951501|ref|YP_008884071.1|   3.01e-29   0.000000398   6-130   2fup A:1-130  
 
Weak hits:
gi|564950537|ref|YP_008883107.1|   0.0549   0.019   47-94   2fup A:1-130  
gi|564950979|ref|YP_008883549.1|   0.0745   0.024   88-132   2fup A:1-130  

Pseudomonas aeruginosa LES431 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|568152858|ref|YP_008941814.1|   3.01e-29   0.000000398   6-130   2fup A:1-130  
 
Weak hits:
gi|568151814|ref|YP_008940761.1|   0.0549   0.019   47-94   2fup A:1-130  
gi|568152241|ref|YP_008941189.1|   0.0745   0.024   88-132   2fup A:1-130  

Pseudomonas aeruginosa RP73 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|514410578|ref|YP_008133990.1|   3.01e-29   0.000000398   6-130   2fup A:1-130  
 
Weak hits:
gi|514411069|ref|YP_008134510.1|   0.0745   0.024   88-132   2fup A:1-130  

Pseudomonas aeruginosa B136-33 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|478477796|ref|YP_007708447.1|   3.01e-29   0.000000398   6-130   2fup A:1-130  
 
Weak hits:
gi|478476836|ref|YP_007707487.1|   0.0785   0.018   47-94   2fup A:1-130  
gi|478477261|ref|YP_007707912.1|   0.0745   0.024   88-132   2fup A:1-130  

Pseudomonas aeruginosa PA1R has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|558667130|ref|YP_008803840.1|   3.4e-29   0.000000373   6-130   2fup A:1-130  
 
Weak hits:
gi|558667705|ref|YP_008804415.1|   0.0745   0.024   88-132   2fup A:1-130  

Pseudomonas aeruginosa PA1 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|558673481|ref|YP_008810189.1|   3.4e-29   0.000000373   6-130   2fup A:1-130  
 
Weak hits:
gi|558674056|ref|YP_008810764.1|   0.0745   0.024   88-132   2fup A:1-130  

Pseudomonas aeruginosa DK2 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|392982910|ref|YP_006481497.1|   3.01e-29   0.000000398   6-130   2fup A:1-130  
 
Weak hits:
gi|392982029|ref|YP_006480616.1|   0.0785   0.018   47-94   2fup A:1-130  
gi|392982397|ref|YP_006480984.1|   0.0745   0.024   88-132   2fup A:1-130  

Pseudomonas aeruginosa NCGM2.S1 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|386067388|ref|YP_005982692.1|   3.01e-29   0.000000398   6-130   2fup A:1-130  
 
Weak hits:
gi|386067969|ref|YP_005983273.1|   0.0745   0.024   88-132   2fup A:1-130  
gi|386068449|ref|YP_005983753.1|   0.0536   0.02   47-95   2fup A:1-130  

Pseudomonas aeruginosa M18 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|386057680|ref|YP_005974202.1|   3.01e-29   0.000000398   6-130   2fup A:1-130  

  1 2   Next Last
Showing genomes 1 to 25 of 41

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Select to display   Genome       Domains   Proteins
No Yes ALL   3302 3302
No Yes Pseudomonas sp. TKP   1 1
No Yes Pseudomonas fulva 12-X   1 1
No Yes Pseudomonas fluorescens SBW25   1 1
No Yes Pseudomonas mendocina ymp   1 1
No Yes Pseudomonas aeruginosa UCBPP-PA14   1 1
No Yes Pseudomonas denitrificans ATCC 13867   1 1
No Yes Pseudomonas stutzeri CCUG 29243   1 1
No Yes Pseudomonas stutzeri DSM 10701   1 1
No Yes Pseudomonas stutzeri RCH2   1 1
No Yes Pseudomonas poae RE*1-1-14   1 1
No Yes Pseudomonas fluorescens A506   1 1
No Yes Pseudomonas fluorescens R124   1 1
No Yes Pseudomonas fluorescens Pf0-1   1 1
No Yes Pseudomonas resinovorans NBRC 106553   1 1
No Yes Pseudomonas mendocina NK-01   1 1
No Yes Pseudomonas aeruginosa SCV20265   1 1
No Yes Pseudomonas aeruginosa MTB-1   1 1
No Yes Pseudomonas aeruginosa LES431   1 1
No Yes Pseudomonas aeruginosa RP73   1 1
No Yes Pseudomonas aeruginosa B136-33   1 1
No Yes Pseudomonas aeruginosa PA1R   1 1
No Yes Pseudomonas aeruginosa PA1   1 1
No Yes Pseudomonas aeruginosa DK2   1 1
No Yes Pseudomonas aeruginosa NCGM2.S1   1 1
No Yes Pseudomonas aeruginosa M18   1 1
No Yes Pseudomonas aeruginosa LESB58   1 1
No Yes Pseudomonas aeruginosa PA7   1 1
No Yes Pseudomonas aeruginosa PAO1   1 1
No Yes Combined (meta-genome)   1 1
No Yes Fungus garden combined (combined) (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime (meta-genome)   1 1
No Yes Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome)   1 1
No Yes NCBI 2017_08 genome   2926 2926
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   7 7
No Yes Uniprot 2018_03 genome   294 294
No Yes Global Ocean Sampling Expedition (GOS)   2 2
No Yes PDB chains (SCOP 1.75) (PDB)   1 1
No Yes Protein Data Bank (all PDB sequenc)   1 1
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   3 3
No Yes TargetDB (Targets)   27 27

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