SUPERFAMILY 1.75 HMM library and genome assignments server

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PG0816-like superfamily domain assignments
in
Clostridium perfringens ATCC 13124

Network of domain occurrence in all genomes



No domain assignments for these genomes.


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Select to display   Genome       Domains   Proteins
No Yes ALL   2721 2721
No Yes Leadbetterella byssophila DSM 17132   1 1
No Yes Runella slithyformis DSM 19594   1 1
No Yes Tannerella forsythia ATCC 43037   1 1
No Yes Prevotella melaninogenica ATCC 25845   4 4
No Yes Prevotella intermedia 17   1 1
No Yes Prevotella denticola F0289   3 3
No Yes Porphyromonas asaccharolytica DSM 20707   2 2
No Yes Porphyromonas gingivalis ATCC 33277   2 2
No Yes Alistipes finegoldii DSM 17242   2 2
No Yes Bacteroides salanitronis DSM 18170   1 1
No Yes Bacteroides vulgatus ATCC 8482   1 1
No Yes Bacteroides thetaiotaomicron VPI-5482   2 2
No Yes Bacteroides fragilis YCH46   1 1
No Yes Pedobacter saltans DSM 12145   1 1
No Yes Ornithobacterium rhinotracheale DSM 15997   1 1
No Yes Echinicola vietnamensis DSM 17526   1 1
No Yes Emticicia oligotrophica DSM 17448   1 1
No Yes Prevotella sp. oral taxon 299 str. F0039   3 3
No Yes Prevotella dentalis DSM 3688   1 1
No Yes Porphyromonas gingivalis TDC60   3 3
No Yes Porphyromonas gingivalis W83   2 2
No Yes Alistipes shahii WAL 8301   2 2
No Yes Bacteroides xylanisolvens XB1A   2 2
No Yes Bacteroides fragilis 638R   2 2
No Yes Dump bottom (Dump bottom) (meta-genome)   1 1
No Yes Dump top (Dump top) (meta-genome)   1 1
No Yes Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)   2 2
No Yes Mouse Gut Community lean1 (meta-genome)   4 4
No Yes Mouse Gut Community lean2 (meta-genome)   1 1
No Yes NCBI 2017_08 genome   1514 1512
No Yes STRING v9.0.5 (STRING)   8 8
No Yes Termite Protist Endosymbiont Community (meta-genome)   1 1
No Yes Uniprot 2018_03 genome   1109 1107
No Yes NCBI plasmid sequences (Plasmids)   4 4
No Yes PDB chains (SCOP 1.75) (PDB)   1 1
No Yes Protein Data Bank (all PDB sequenc)   1 1
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   4 4
No Yes TargetDB (Targets)   4 4

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