SUPERFAMILY 1.75 HMM library and genome assignments server

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Duffy binding domain family domain assignments
in
PDB chains (SCOP 1.75)

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PDB chains (SCOP 1.75) (PDB) has 3 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
1zroA   2.12e-69   0.00000000000506   286-596   1zro A:283-596  
  4.03e-56   0.0000000000332   9-281   1zro A:8-282  
2c6jA   4.47e-68   0.0000000000136   16-306   2c6j A:15-308  

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Select to display   Genome       Domains   Proteins
No Yes ALL   3831 3831
No Yes Plasmodium falciparum 3D7   41 25
No Yes Plasmodium vivax SaI-1 7.0   1 1
No Yes Plasmodium knowlesi strain H   3 3
No Yes Plasmodium yoelii ssp. yoelii 1   1 1
No Yes Plasmodium chabaudi   1 1
No Yes Plasmodium berghei ANKA   1 1
No Yes Plasmodium falciparum HB3   62 38
No Yes Plasmodium falciparum Dd2   48 26
No Yes NCBI 2017_08 genome   92 65
No Yes Protozoadb 2010_08 (Protozoadb)   97 63
No Yes STRING v9.0.5 (STRING)   47 30
No Yes Uniprot 2018_03 genome   3175 2356
No Yes PDB chains (SCOP 1.75) (PDB)   3 2
No Yes Protein Data Bank (all PDB sequenc)   28 21
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   73 73
No Yes TargetDB (Targets)   1 1

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