SUPERFAMILY 1.75 HMM library and genome assignments server

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Bacteriophage trimeric proteins domain superfamily domain assignments
in
Clostridium perfringens ATCC 13124

Network of domain occurrence in all genomes



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Select to display   Genome       Domains   Proteins
No Yes ALL   864 864
No Yes Bartonella tribocorum CIP 105476   2 2
No Yes Bartonella grahamii as4aup   2 2
No Yes Thioalkalivibrio sulfidophilus HL-EbGr7   1 1
No Yes Bordetella parapertussis Bpp5   1 1
No Yes Rhodopseudomonas palustris TIE-1   1 1
No Yes Activated sludge plasmid pool Visp-2009 (Newbler) (meta-genome)   1 1
No Yes Dump bottom (Dump bottom) (meta-genome)   8 8
No Yes Dump top (Dump top) (meta-genome)   1 1
No Yes Human Gut Community Subject 8 (meta-genome)   1 1
No Yes NCBI 2017_08 genome   143 142
No Yes STRING v9.0.5 (STRING)   6 6
No Yes Uniprot 2018_03 genome   281 281
No Yes Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)   1 1
No Yes Global Ocean Sampling Expedition (GOS)   57 57
No Yes NCBI viral sequences (Viral)   17 17
No Yes PDB chains (SCOP 1.75) (PDB)   7 7
No Yes Protein Data Bank (all PDB sequenc)   82 82
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   177 177
No Yes UniProt viral sequences (Viral)   68 68

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]