SUPERFAMILY 1.75 HMM library and genome assignments server

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CAC2185-like superfamily domain assignments
in
Clostridium perfringens ATCC 13124

Network of domain occurrence in all genomes



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Select to display   Genome       Domains   Proteins
No Yes ALL   3288 3288
No Yes Roseburia intestinalis   1 1
No Yes Clostridium cellulovorans 743B   1 1
No Yes Clostridium acetobutylicum ATCC 824   2 2
No Yes Lactobacillus johnsonii FI9785   1 1
No Yes Cyclobacterium marinum DSM 745   1 1
No Yes Sulfuricurvum kujiense DSM 16994   1 1
No Yes Aggregatibacter aphrophilus NJ8700   1 1
No Yes Haemophilus parasuis SH0165   1 1
No Yes Haemophilus parainfluenzae T3T1   1 1
No Yes Haemophilus influenzae PittEE   1 1
No Yes Actinobacillus succinogenes 130Z   1 1
No Yes Actinobacillus pleuropneumoniae serovar 5b str. L20   1 1
No Yes Psychromonas ingrahamii 37   1 1
No Yes Edwardsiella ictaluri 93-146   1 1
No Yes Edwardsiella tarda EIB202   1 1
No Yes Gloeobacter kilaueensis Gloeobacter sp. JS   1 1
No Yes Bifidobacterium longum subsp. longum BBMN68   1 1
No Yes Coprococcus catus GD/7   1 1
No Yes Clostridium saccharoperbutylacetonicum N1-4(HMT)   2 2
No Yes Clostridium acetobutylicum DSM 1731   2 2
No Yes Clostridium acetobutylicum EA 2018   2 2
No Yes Lactobacillus reuteri TD1   1 1
No Yes Lactococcus lactis subsp. cremoris UC509.9   1 1
No Yes Lactococcus lactis subsp. cremoris SK11   1 1
No Yes Streptococcus pneumoniae INV200   1 1
No Yes Streptococcus pneumoniae AP200   1 1
No Yes Streptococcus pneumoniae CGSP14   1 1
No Yes Streptococcus pneumoniae 70585   1 1
No Yes Streptococcus pneumoniae D39   1 1
No Yes Streptococcus pneumoniae TIGR4   1 1
No Yes Streptococcus salivarius JIM8777   1 1
No Yes Prevotella dentalis DSM 3688   1 1
No Yes Mannheimia succiniciproducens MBEL55E   1 1
No Yes Aggregatibacter actinomycetemcomitans D11S-1   1 1
No Yes Haemophilus parasuis ZJ0906   1 1
No Yes Haemophilus influenzae KR494   1 1
No Yes Haemophilus influenzae F3047   1 1
No Yes Haemophilus influenzae F3031   1 1
No Yes Haemophilus influenzae 10810   1 1
No Yes Haemophilus influenzae PittGG   1 1
No Yes Haemophilus influenzae 86-028NP   1 1
No Yes Haemophilus influenzae R2866   1 1
No Yes Haemophilus influenzae R2846   1 1
No Yes Haemophilus influenzae Rd KW20   1 1
No Yes Actinobacillus suis H91-0380   1 1
No Yes Actinobacillus pleuropneumoniae serovar 3 str. JL03   1 1
No Yes Actinobacillus pleuropneumoniae serovar 7 str. AP76   1 1
No Yes Edwardsiella tarda C07-087   1 1
No Yes Edwardsiella tarda FL6-60   1 1
No Yes Human Gut Community Subject 7 (meta-genome)   2 2
No Yes Human Gut Community Subject 8 (meta-genome)   2 2
No Yes Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)   3 3
No Yes NCBI 2017_08 genome   2699 2699
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   1 1
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   24 24
No Yes Uniprot 2018_03 genome   455 455
No Yes NCBI plasmid sequences (Plasmids)   3 3
No Yes PDB chains (SCOP 1.75) (PDB)   2 2
No Yes Protein Data Bank (all PDB sequenc)   2 2
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   6 6
No Yes TargetDB (Targets)   7 7

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