SUPERFAMILY 1.75 HMM library and genome assignments server

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FwdE-like superfamily domain assignments
in
Vibrio vulnificus YJ016


No domain assignments for these genomes.


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View all assignments containing a FwdE-like domain in each group of genomes.

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Select to display   Genome       Domains   Proteins
No Yes ALL   8633 8633
No Yes Microcoleus sp. PCC 7113   1 1
No Yes Caldilinea aerophila DSM 14535 = NBRC 104270   1 1
No Yes Dehalococcoides ethenogenes 195   1 1
No Yes Thermomicrobium roseum DSM 5159   1 1
No Yes Roseiflexus sp. RS-1   1 1
No Yes Roseiflexus castenholzii DSM 13941   1 1
No Yes Chloroflexus sp. MS-G   1 1
No Yes Chloroflexus sp. Y-400-fl   1 1
No Yes Chloroflexus aggregans DSM 9485   1 1
No Yes Chloroflexus aurantiacus J-10-fl   1 1
No Yes Deinococcus proteolyticus MRP   1 1
No Yes Deinococcus radiodurans R1   1 1
No Yes Sulfobacillus acidophilus DSM 10332   3 3
No Yes Candidatus Desulforudis audaxviator MP104C   1 1
No Yes Thermincola potens JR   3 3
No Yes Pelotomaculum thermopropionicum SI   1 1
No Yes Desulfosporosinus acidiphilus SJ4   1 1
No Yes Desulfosporosinus orientis DSM 765   1 1
No Yes Dehalobacter sp. DCA   1 1
No Yes Dehalobacter sp. CF   1 1
No Yes Syntrophobotulus glycolicus DSM 8271   1 1
No Yes Desulfitobacterium hafniense Y51   2 2
No Yes Desulfitobacterium dehalogenans ATCC 51507   2 2
No Yes Desulfotomaculum acetoxidans DSM 771   4 3
No Yes Desulfotomaculum kuznetsovii DSM 6115   4 4
No Yes Desulfotomaculum ruminis DSM 2154   1 1
No Yes Acetobacterium woodii DSM 1030   2 2
No Yes Eubacterium limosum KIST612   2 2
No Yes Clostridium difficile 630   1 1
No Yes Clostridium sticklandii DSM 519   1 1
No Yes Syntrophothermus lipocalidus DSM 12680   1 1
No Yes Syntrophomonas wolfei subsp. wolfei str. Goettingen   2 2
No Yes Heliobacterium modesticaldum Ice1   1 1
No Yes Alkaliphilus metalliredigens QYMF   1 1
No Yes Clostridium ljungdahlii DSM 13528   2 2
No Yes Clostridium botulinum A str. ATCC 3502   1 1
No Yes Caldicellulosiruptor obsidiansis OB47   1 1
No Yes Caldicellulosiruptor kronotskyensis 2002   1 1
No Yes Caldicellulosiruptor hydrothermalis 108   1 1
No Yes Caldicellulosiruptor owensensis OL   1 1
No Yes Caldicellulosiruptor lactoaceticus 6A   1 1
No Yes Caldicellulosiruptor kristjanssonii 177R1B   1 1
No Yes Caldicellulosiruptor saccharolyticus DSM 8903   1 1
No Yes Caldicellulosiruptor bescii DSM 6725   2 2
No Yes Thermodesulfobium narugense DSM 14796   1 1
No Yes Tepidanaerobacter acetatoxydans Re1   1 1
No Yes Thermoanaerobacter tengcongensis MB4   1 1
No Yes Carboxydothermus hydrogenoformans Z-2901   1 1
No Yes Moorella thermoacetica ATCC 39073   1 1
No Yes Ammonifex degensii KC4   1 1
No Yes Thermoanaerobacter pseudethanolicus ATCC 33223   1 1
No Yes Thermoanaerobacter brockii subsp. finnii Ako-1   1 1
No Yes Acetohalobium arabaticum DSM 5501   1 1
No Yes Halanaerobium hydrogeniformans   1 1
No Yes Ignavibacterium album JCM 16511   2 2
No Yes Chlorobium tepidum TLS   1 1
No Yes Chloroherpeton thalassium ATCC 35110   1 1
No Yes Odoribacter splanchnicus DSM 20712   1 1
No Yes Alistipes finegoldii DSM 17242   1 1
No Yes Zobellia galactanivorans   1 1
No Yes Isosphaera pallida ATCC 43644   1 1
No Yes Thermovirga lienii DSM 17291   1 1
No Yes Aminobacterium colombiense DSM 12261   1 1
No Yes Treponema primitia ZAS-2   1 1
No Yes Thermodesulfatator indicus DSM 15286   3 3
No Yes Thermodesulfobacterium sp. OPB45   1 1
No Yes Desulfurispirillum indicum S5   1 1
No Yes Deferribacter desulfuricans SSM1   1 1
No Yes Dictyoglomus turgidum DSM 6724   1 1
No Yes Dictyoglomus thermophilum H-6-12   1 1
No Yes Candidatus Solibacter usitatus Ellin6076   1 1
No Yes Candidatus Koribacter versatilis Ellin345   1 1
No Yes Terriglobus saanensis SP1PR4   1 1
No Yes Terriglobus roseus DSM 18391   1 1
No Yes Acidobacterium capsulatum ATCC 51196   1 1
No Yes Thermodesulfovibrio yellowstonii DSM 11347   2 2
No Yes Candidatus Methylomirabilis oxyfera   1 1
No Yes Sulfurospirillum deleyianum DSM 6946   1 1
No Yes Sulfurospirillum barnesii SES-3   1 1
No Yes Arcobacter butzleri RM4018   1 1
No Yes Sulfurovum sp. NBC37-1   2 2
No Yes Desulfarculus baarsii DSM 2075   2 2
No Yes Desulfobacca acetoxidans DSM 11109   2 2
No Yes Syntrophus aciditrophicus SB   4 4
No Yes Desulfomonile tiedjei DSM 6799   2 2
No Yes Syntrophobacter fumaroxidans MPOB   2 2
No Yes Desulfurivibrio alkaliphilus AHT2   2 2
No Yes Desulfobulbus propionicus DSM 2032   1 1
No Yes Desulfatibacillum alkenivorans AK-01   2 2
No Yes Desulfobacterium autotrophicum HRM2   2 2
No Yes Desulfococcus oleovorans Hxd3   1 1
No Yes Desulfohalobium retbaense DSM 5692   2 2
No Yes Desulfomicrobium baculatum DSM 4028   2 2
No Yes Desulfovibrio piezophilus   2 2
No Yes Desulfovibrio aespoeensis Aspo-2   2 2
No Yes Desulfovibrio magneticus RS-1   2 2
No Yes Desulfovibrio alaskensis G20   2 2
No Yes Desulfovibrio vulgaris subsp. vulgaris DP4   1 1
No Yes Desulfovibrio salexigens DSM 2638   3 3
No Yes Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774   3 3
No Yes Desulfovibrio africanus str. Walvis Bay   2 2
No Yes Hippea maritima DSM 10411   1 1
No Yes Geobacter daltonii FRC-32   2 2
No Yes Geobacter sp. M21   1 1
No Yes Geobacter bemidjiensis Bem   1 1
No Yes Pelobacter propionicus DSM 2379   2 2
No Yes Pelobacter carbinolicus DSM 2380   2 2
No Yes Sorangium cellulosum 'So ce 56'   1 1
No Yes Anaeromyxobacter sp. Fw109-5   1 1
No Yes Corallococcus coralloides DSM 2259   1 1
No Yes Pseudogulbenkiania sp. NH8B   1 1
No Yes Neisseria meningitidis alpha14   1 1
No Yes Neisseria meningitidis FAM18   1 1
No Yes Neisseria lactamica 020-06   1 1
No Yes Neisseria gonorrhoeae NCCP11945   1 1
No Yes Candidatus Accumulibacter phosphatis clade IIA str. UW-1   1 1
No Yes Burkholderia pseudomallei 1106a   1 1
No Yes Nitrosomonas eutropha C91   1 1
No Yes Nitrosomonas europaea ATCC 19718   1 1
No Yes Magnetospirillum magneticum AMB-1   1 1
No Yes Azospirillum brasilense Sp245   1 1
No Yes Rhodanobacter denitrificans   1 1
No Yes Fervidicoccus fontis Kam940   1 1
No Yes Ignisphaera aggregans DSM 17230   1 1
No Yes Desulfurococcus fermentans DSM 16532   1 1
No Yes Desulfurococcus kamchatkensis 1221n   1 1
No Yes Desulfurococcus mucosus DSM 2162   1 1
No Yes Thermofilum sp. 1910b   1 1
No Yes Thermofilum pendens Hrk 5   1 1
No Yes Pyrobaculum arsenaticum DSM 13514   1 1
No Yes Pyrobaculum oguniense TE7   1 1
No Yes Pyrobaculum islandicum DSM 4184   1 1
No Yes Methanocella arvoryzae MRE50   4 4
No Yes Methanocella conradii HZ254   5 5
No Yes Methanocella paludicola SANAE   1 1
No Yes Methanosaeta harundinacea 6Ac   6 5
No Yes Methanosaeta thermophila PT   4 3
No Yes Methanosaeta concilii GP6   7 5
No Yes Methanohalobium evestigatum Z-7303   1 1
No Yes Methanococcoides burtonii DSM 6242   2 2
No Yes Methanosarcina acetivorans C2A   5 4
No Yes Methanosarcina mazei Go1   4 3
No Yes Methanosarcina barkeri str. Fusaro   6 5
No Yes Methanohalophilus mahii DSM 5219   2 2
No Yes Methanosphaerula palustris E1-9c   3 3
No Yes Methanoregula boonei 6A8   3 3
No Yes Methanospirillum hungatei JF-1   7 6
No Yes Methanocorpusculum labreanum Z   3 3
No Yes Methanoplanus petrolearius DSM 11571   5 4
No Yes Methanoculleus bourgensis MS2   4 4
No Yes Methanoculleus marisnigri JR1   5 4
No Yes Methanopyrus kandleri AV19   2 1
No Yes Archaeoglobus fulgidus DSM 4304   2 2
No Yes Thermococcus sp. 4557   1 1
No Yes Thermococcus onnurineus NA1   1 1
No Yes Thermococcus sibiricus MM 739   1 1
No Yes Pyrococcus sp. ST04   1 1
No Yes Pyrococcus yayanosii CH1   1 1
No Yes Pyrococcus horikoshii OT3   1 1
No Yes Pyrococcus abyssi GE5   1 1
No Yes Pyrococcus furiosus COM1   2 2
No Yes Thermoplasmatales archaeon BRNA1   1 1
No Yes Thermoplasma volcanium GSS1   1 1
No Yes Thermoplasma acidophilum DSM 1728   1 1
No Yes Halopiger xanaduensis SH-6   1 1
No Yes Methanotorris igneus Kol 5   2 2
No Yes Methanocaldococcus sp. FS406-22   2 2
No Yes Methanocaldococcus fervens AG86   1 1
No Yes Methanocaldococcus vulcanius M7   1 1
No Yes Methanothermococcus okinawensis IH1   2 2
No Yes Methanococcus aeolicus Nankai-3   2 2
No Yes Methanococcus maripaludis C5   2 2
No Yes Methanococcus voltae A3   2 2
No Yes Methanococcus vannielii SB   2 2
No Yes Methanothermus fervidus DSM 2088   3 2
No Yes Methanothermobacter marburgensis str. Marburg   6 4
No Yes Methanothermobacter thermautotrophicus str. Delta H   6 4
No Yes Methanobrevibacter sp. AbM4   3 2
No Yes Methanobrevibacter ruminantium M1   1 1
No Yes Methanobrevibacter smithii ATCC 35061   5 3
No Yes Complete genome sequence of Methanobacterium sp. Mb1   6 5
No Yes Synechococcus sp. JA-2-3B'a(2-13)   1 1
No Yes Chthonomonas calidirosea T49   1 1
No Yes Sulfobacillus acidophilus TPY   3 3
No Yes Desulfosporosinus meridiei DSM 13257   2 2
No Yes Desulfitobacterium dichloroeliminans LMG P-21439   1 1
No Yes Desulfitobacterium hafniense DCB-2   2 2
No Yes Desulfotomaculum gibsoniae DSM 7213   1 1
No Yes Clostridium difficile BI1   1 1
No Yes Clostridium difficile R20291   1 1
No Yes Clostridium difficile CD196   1 1
No Yes Clostridium sp. SY8519   1 1
No Yes Clostridium autoethanogenum DSM 10061   1 1
No Yes Clostridium botulinum H04402 065   1 1
No Yes Clostridium botulinum B1 str. Okra   1 1
No Yes Clostridium botulinum Ba4 str. 657   1 1
No Yes Clostridium botulinum A2 str. Kyoto   1 1
No Yes Clostridium botulinum A3 str. Loch Maree   1 1
No Yes Clostridium botulinum A str. Hall   1 1
No Yes Clostridium botulinum A str. ATCC 19397   1 1
No Yes Thermacetogenium phaeum DSM 12270   2 2
No Yes Desulfocapsa sulfexigens DSM 10523   2 2
No Yes Desulfobacula toluolica Tol2   5 5
No Yes Desulfovibrio hydrothermalis AM13 = DSM 14728   4 4
No Yes Desulfovibrio vulgaris RCH1   1 1
No Yes Desulfovibrio vulgaris str. 'Miyazaki F'   1 1
No Yes Desulfovibrio vulgaris str. Hildenborough   1 1
No Yes Desulfovibrio gigas DSM 1382 = ATCC 19364   2 2
No Yes Desulfovibrio desulfuricans ND132   2 2
No Yes Sorangium cellulosum So0157-2   1 1
No Yes Myxococcus stipitatus DSM 14675   1 1
No Yes Neisseria meningitidis WUE 2594   1 1
No Yes Neisseria meningitidis G2136   1 1
No Yes Neisseria meningitidis M01-240149   1 1
No Yes Neisseria meningitidis NZ-05/33   1 1
No Yes Neisseria meningitidis 053442   1 1
No Yes Neisseria meningitidis H44/76   1 1
No Yes Neisseria meningitidis alpha710   1 1
No Yes Neisseria meningitidis MC58   1 1
No Yes Neisseria gonorrhoeae TCDC-NG08107   1 1
No Yes Neisseria gonorrhoeae FA 1090   1 1
No Yes Burkholderia pseudomallei MSHR305   1 1
No Yes Burkholderia pseudomallei BPC006   1 1
No Yes Burkholderia pseudomallei 1026b   1 1
No Yes Burkholderia pseudomallei 668   1 1
No Yes Burkholderia pseudomallei 1710b   1 1
No Yes Burkholderia pseudomallei K96243   1 1
No Yes Nitrosomonas sp. AL212   1 1
No Yes Sulfuricella denitrificans skB26   2 2
No Yes Sulfolobus islandicus HVE10/4   1 1
No Yes Methanomethylovorans hollandica DSM 15978   1 1
No Yes Methanolobus psychrophilus R15   1 1
No Yes Methanosarcina mazei Tuc01   1 1
No Yes Methanoregula formicica Methanoregula formicicum SMSP   3 3
No Yes Archaeoglobus sulfaticallidus PM70-1   1 1
No Yes Thermococcus sp. CL1   1 1
No Yes Thermococcus litoralis DSM 5473   1 1
No Yes Pyrococcus sp. NA2   1 1
No Yes Pyrococcus furiosus DSM 3638   2 2
No Yes Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1   1 1
No Yes Natrinema pellirubrum DSM 15624   2 2
No Yes Methanococcus maripaludis X1   3 3
No Yes Methanococcus maripaludis C6   2 2
No Yes Methanococcus maripaludis C7   2 2
No Yes Methanococcus maripaludis S2   3 3
No Yes Methanobacterium sp. SWAN-1   4 4
No Yes 2_050719S (meta-genome)   6 6
No Yes 4_050719Q (meta-genome)   6 6
No Yes 5_050719P (meta-genome)   3 3
No Yes Anaerobic methane oxidation (AOM) community from Eel River Basin sediment, California (meta-genome)   6 4
No Yes Bath Hot Springs, planktonic community (meta-genome)   1 1
No Yes Dump bottom (Dump bottom) (meta-genome)   3 3
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #1 (meta-genome)   1 1
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   13 13
No Yes Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes   6 6
No Yes Guerrero Negro salt ponds hypersaline mat 02(H) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 04(N) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 05(O) (meta-genome)   3 3
No Yes Guerrero Negro salt ponds hypersaline mat 07(S) (meta-genome)   2 2
No Yes Guerrero Negro salt ponds hypersaline mat 10(Z) (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP8 from OSP Spring (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP11 from Octopus Springs (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP12 from Calcite Springs, Tower Falls Region (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   9 9
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome)   5 5
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime (meta-genome)   9 9
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome)   18 18
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP19 from Cistern Spring (meta-genome)   3 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome)   11 11
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP3 from Monarch Geyser, Norris Geyser Basin (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP4 from Joseph's Coat Springs (meta-genome)   3 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome)   10 10
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome)   3 3
No Yes Human Gut Community Subject 7 (meta-genome)   3 2
No Yes Human Gut Community Subject 8 (meta-genome)   4 3
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   2 2
No Yes Marine anammox bioreactor enriched for Scalindua species (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   4 4
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   3 3
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   1 1
No Yes NCBI 2017_08 genome   4958 4778
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   2 2
No Yes Olavius algarvensis endosymbiont metagenome Delta1 (meta-genome)   1 1
No Yes Olavius algarvensis endosymbiont metagenome Delta4 (meta-genome)   3 3
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   9 9
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   1 1
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   2 2
No Yes Sludge/US, Jazz Assembly (meta-genome)   1 1
No Yes Sludge/US, Phrap Assembly (meta-genome)   1 1
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   4 4
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   19 19
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   2 2
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   2 2
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   2 2
No Yes Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)   19 17
No Yes STRING v9.0.5 (STRING)   195 183
No Yes Switchgrass field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing switchgr (meta-genome)   2 2
No Yes Termite Protist Endosymbiont Community (meta-genome)   4 4
No Yes Uniprot 2018_03 genome   2492 2354
No Yes Uranium Contaminated Groundwater FW106 (meta-genome)   1 1
No Yes Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)   31 27
No Yes Global Ocean Sampling Expedition (GOS)   2 2
No Yes NCBI plasmid sequences (Plasmids)   4 4
No Yes PDB chains (SCOP 1.75) (PDB)   2 2
No Yes Protein Data Bank (all PDB sequenc)   4 4
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   8 8
No Yes TargetDB (Targets)   21 21

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