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NE0471 N-terminal domain-like superfamily domain assignments
in
Geobacter sp. M18

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Geobacter sp. M18 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|322418474|ref|YP_004197697.1|   3.92e-19   5-78   NE0471 N-terminal domain-like  
gi|322421831|ref|YP_004201054.1|   1.83e-17   1-73   NE0471 N-terminal domain-like  

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Select to display   Genome       Domains   Proteins
No Yes ALL   8105 8105
No Yes Synechocystis sp. PCC 6803   2 2
No Yes Synechococcus sp. PCC 6312   2 2
No Yes Synechococcus elongatus PCC 7942   1 1
No Yes Trichodesmium erythraeum IMS101   1 1
No Yes Microcystis aeruginosa NIES-843   4 4
No Yes Nostoc sp. PCC 7107   1 1
No Yes Eggerthella lenta DSM 2243   3 2
No Yes Slackia heliotrinireducens DSM 20476   1 1
No Yes Microlunatus phosphovorus NM-1   1 1
No Yes Bifidobacterium dentium Bd1   1 1
No Yes Bifidobacterium bifidum S17   1 1
No Yes Caldilinea aerophila DSM 14535 = NBRC 104270   1 1
No Yes Roseiflexus sp. RS-1   2 2
No Yes Chloroflexus sp. Y-400-fl   1 1
No Yes Chloroflexus aurantiacus J-10-fl   1 1
No Yes Truepera radiovictrix DSM 17093   1 1
No Yes Deinococcus proteolyticus MRP   1 1
No Yes Selenomonas sputigena ATCC 35185   3 3
No Yes Sulfobacillus acidophilus DSM 10332   1 1
No Yes Desulfosporosinus orientis DSM 765   4 4
No Yes Syntrophobotulus glycolicus DSM 8271   2 2
No Yes Desulfitobacterium hafniense Y51   1 1
No Yes Desulfotomaculum acetoxidans DSM 771   1 1
No Yes Desulfotomaculum kuznetsovii DSM 6115   2 2
No Yes Acetobacterium woodii DSM 1030   1 1
No Yes Clostridium saccharolyticum WM1   1 1
No Yes Eubacterium rectale M104/1   2 2
No Yes Eubacterium rectale ATCC 33656   2 2
No Yes Coprococcus sp. ART55/1   1 1
No Yes Roseburia hominis A2-183   1 1
No Yes Butyrivibrio fibrisolvens   2 2
No Yes Syntrophothermus lipocalidus DSM 12680   1 1
No Yes Syntrophomonas wolfei subsp. wolfei str. Goettingen   2 2
No Yes Alkaliphilus metalliredigens QYMF   1 1
No Yes Candidatus Arthromitus sp. SFB-mouse-Japan   4 4
No Yes Clostridium novyi NT   1 1
No Yes Clostridium ljungdahlii DSM 13528   1 1
No Yes Caldicellulosiruptor obsidiansis OB47   1 1
No Yes Caldicellulosiruptor kronotskyensis 2002   1 1
No Yes Caldicellulosiruptor hydrothermalis 108   1 1
No Yes Caldicellulosiruptor owensensis OL   1 1
No Yes Caldicellulosiruptor lactoaceticus 6A   1 1
No Yes Caldicellulosiruptor kristjanssonii 177R1B   1 1
No Yes Caldicellulosiruptor saccharolyticus DSM 8903   1 1
No Yes Caldicellulosiruptor bescii DSM 6725   1 1
No Yes Thermoanaerobacterium thermosaccharolyticum DSM 571   1 1
No Yes Moorella thermoacetica ATCC 39073   2 2
No Yes Thermoanaerobacter mathranii subsp. mathranii str. A3   1 1
No Yes Thermoanaerobacter pseudethanolicus ATCC 33223   1 1
No Yes Thermoanaerobacter italicus Ab9   1 1
No Yes Thermoanaerobacter wiegelii Rt8.B1   1 1
No Yes Thermoanaerobacter brockii subsp. finnii Ako-1   1 1
No Yes Pelodictyon phaeoclathratiforme BU-1   9 9
No Yes Chlorobium chlorochromatii CaD3   7 7
No Yes Chlorobium phaeobacteroides DSM 266   7 7
No Yes Chlorobium limicola DSM 245   3 3
No Yes Chlorobaculum parvum NCIB 8327   1 1
No Yes Chlorobium tepidum TLS   1 1
No Yes Chloroherpeton thalassium ATCC 35110   2 2
No Yes Haliscomenobacter hydrossis DSM 1100   4 4
No Yes Cyclobacterium marinum DSM 745   2 2
No Yes Marivirga tractuosa DSM 4126   1 1
No Yes Dyadobacter fermentans DSM 18053   2 2
No Yes Spirosoma linguale DSM 74   3 3
No Yes Parabacteroides distasonis ATCC 8503   1 1
No Yes Fibrobacter succinogenes subsp. succinogenes S85   2 2
No Yes Turneriella parva DSM 21527   1 1
No Yes Brachyspira intermedia PWS/A   1 1
No Yes Brachyspira hyodysenteriae WA1   1 1
No Yes Spirochaeta smaragdinae DSM 11293   1 1
No Yes Treponema primitia ZAS-2   1 1
No Yes Thermodesulfatator indicus DSM 15286   1 1
No Yes Mesotoga prima MesG1.Ag.4.2   1 1
No Yes Candidatus Methylomirabilis oxyfera   2 2
No Yes Acidithiobacillus ferrivorans SS3   2 2
No Yes Acidithiobacillus caldus SM-1   2 2
No Yes Acidithiobacillus ferrooxidans ATCC 53993   1 1
No Yes uncultured Sulfuricurvum sp. RIFRC-1   1 1
No Yes Desulfomonile tiedjei DSM 6799   1 1
No Yes Desulfobacterium autotrophicum HRM2   2 2
No Yes Desulfococcus oleovorans Hxd3   1 1
No Yes Desulfomicrobium baculatum DSM 4028   1 1
No Yes Desulfovibrio magneticus RS-1   1 1
No Yes Desulfovibrio salexigens DSM 2638   1 1
No Yes Geobacter sp. M21   2 2
No Yes Geobacter uraniireducens Rf4   5 5
No Yes Geobacter lovleyi SZ   1 1
No Yes Geobacter bemidjiensis Bem   3 3
No Yes Geobacter metallireducens GS-15   1 1
No Yes Corallococcus coralloides DSM 2259   1 1
No Yes Aromatoleum aromaticum EbN1   1 1
No Yes Pseudogulbenkiania sp. NH8B   1 1
No Yes Laribacter hongkongensis HLHK9   1 1
No Yes Candidatus Accumulibacter phosphatis clade IIA str. UW-1   3 3
No Yes Verminephrobacter eiseniae EF01-2   1 1
No Yes Herbaspirillum seropedicae SmR1   1 1
No Yes Nitrosomonas europaea ATCC 19718   1 1
No Yes Gallionella capsiferriformans ES-2   4 4
No Yes Magnetococcus marinus MC-1   1 1
No Yes Caulobacter sp. K31   1 1
No Yes Magnetospirillum magneticum AMB-1   1 1
No Yes Rhodospirillum rubrum F11   1 1
No Yes Azospirillum lipoferum 4B   3 3
No Yes Azospirillum sp. B510   2 2
No Yes Acidiphilium cryptum JF-5   1 1
No Yes Rickettsia felis URRWXCal2   1 1
No Yes Methylobacterium sp. 4-46   1 1
No Yes Methylobacterium populi BJ001   1 1
No Yes Genome sequence of Rhizobium sp. strain IRBG74   1 1
No Yes Rhodopseudomonas palustris BisA53   1 1
No Yes Aeromonas veronii B565   1 1
No Yes Aeromonas salmonicida subsp. salmonicida A449   1 1
No Yes Aeromonas hydrophila subsp. hydrophila ATCC 7966   1 1
No Yes Aliivibrio salmonicida LFI1238   1 1
No Yes Vibrio cholerae O395   1 1
No Yes Shewanella woodyi ATCC 51908   1 1
No Yes Marinobacter hydrocarbonoclasticus ATCC 49840   1 1
No Yes Marinobacter aquaeolei VT8   1 1
No Yes Alteromonas macleodii str. 'Deep ecotype'   1 1
No Yes Marinomonas sp. MWYL1   1 1
No Yes Methylomicrobium alcaliphilum   4 4
No Yes Halothiobacillus neapolitanus c2   1 1
No Yes Allochromatium vinosum DSM 180   2 2
No Yes Thiocystis violascens DSM 198   7 7
No Yes Nitrosococcus halophilus Nc4   4 4
No Yes Photorhabdus luminescens subsp. laumondii TTO1   1 1
No Yes Edwardsiella ictaluri 93-146   1 1
No Yes Edwardsiella tarda EIB202   1 1
No Yes Dickeya zeae Ech1591   1 1
No Yes Azotobacter vinelandii DJ   1 1
No Yes Pseudomonas brassicacearum subsp. brassicacearum NFM421   1 1
No Yes Thioalkalimicrobium cyclicum ALM1   1 1
No Yes Synechocystis sp. PCC 6803 substr. PCC-P   2 2
No Yes Synechocystis sp. PCC 6803 substr. PCC-N   2 2
No Yes Synechocystis sp. PCC 6803 substr. GT-I   2 2
No Yes Synechocystis sp. PCC 6803   2 2
No Yes Dactylococcopsis salina PCC 8305   1 1
No Yes Synechococcus elongatus PCC 6301   1 1
No Yes Crinalium epipsammum PCC 9333   1 1
No Yes Oscillatoria nigro-viridis PCC 7112   1 1
No Yes Oscillatoria acuminata PCC 6304   1 1
No Yes Cyanothece sp. PCC 7822   1 1
No Yes Cyanothece sp. PCC 7425   1 1
No Yes Cyanothece sp. PCC 7424   1 1
No Yes Cyanobacterium stanieri PCC 7202   1 1
No Yes Gordonibacter pamelaeae 7-10-1-b   1 1
No Yes Bifidobacterium longum subsp. infantis 157F   1 1
No Yes Bifidobacterium bifidum PRL2010   1 1
No Yes Bifidobacterium bifidum BGN4   1 1
No Yes Thermus oshimai JL-2   1 1
No Yes Faecalibacterium prausnitzii L2-6   1 1
No Yes Ruminococcus champanellensis 18P13   1 1
No Yes Sulfobacillus acidophilus TPY   1 1
No Yes Desulfosporosinus meridiei DSM 13257   1 1
No Yes Desulfitobacterium dichloroeliminans LMG P-21439   1 1
No Yes Desulfitobacterium hafniense DCB-2   1 1
No Yes Desulfotomaculum gibsoniae DSM 7213   2 2
No Yes Candidatus Arthromitus sp. SFB-rat-Yit   1 1
No Yes Candidatus Arthromitus sp. SFB-mouse-Yit   4 4
No Yes Clostridium autoethanogenum DSM 10061   2 2
No Yes Clostridium tetani genome 12124569   1 1
No Yes Echinicola vietnamensis DSM 17526   1 1
No Yes Fibrobacter succinogenes subsp. succinogenes S85   2 2
No Yes Acidithiobacillus ferrooxidans ATCC 23270   1 1
No Yes Desulfobacula toluolica Tol2   1 1
No Yes Desulfovibrio gigas DSM 1382 = ATCC 19364   2 2
No Yes Geobacter sp. M18   2 2
No Yes Myxococcus stipitatus DSM 14675   1 1
No Yes Candidatus Symbiobacter mobilis Comamonadaceae bacterium CR   5 5
No Yes Alicycliphilus denitrificans BC   1 1
No Yes Sulfuricella denitrificans skB26   1 1
No Yes Rhodospirillum rubrum ATCC 11170   1 1
No Yes Rhizobium tropici CIAT 899   1 1
No Yes Rhodopseudomonas palustris BisB5   1 1
No Yes Rhodopseudomonas palustris BisB18   1 1
No Yes Aeromonas hydrophila ML09-119   1 1
No Yes Vibrio cholerae LMA3984-4   1 1
No Yes Vibrio cholerae M66-2   2 2
No Yes Vibrio cholerae O395   1 1
No Yes Vibrio cholerae IEC224   1 1
No Yes Vibrio cholerae O1 str. 2010EL-1786   1 1
No Yes Vibrio cholerae MJ-1236   1 1
No Yes Vibrio cholerae O1 biovar El Tor str. N16961   1 1
No Yes Thioflavicoccus mobilis 8321   2 2
No Yes Legionella pneumophila subsp. pneumophila   1 1
No Yes Dickeya dadantii Ech586   1 1
No Yes Dickeya dadantii 3937   1 1
No Yes Azotobacter vinelandii CA6   1 1
No Yes Azotobacter vinelandii CA   1 1
No Yes Pseudomonas syringae pv. phaseolicola 1448A   1 1
No Yes Pseudomonas syringae pv. syringae B728a   1 1
No Yes Pseudomonas putida NBRC 14164   1 1
No Yes Pseudomonas putida DOT-T1E   1 1
No Yes Pseudomonas fluorescens F113   1 1
No Yes Pseudomonas fluorescens Pf0-1   1 1
No Yes 2_050719S (meta-genome)   1 1
No Yes 3_050719R (meta-genome)   2 2
No Yes 4_050719Q (meta-genome)   4 4
No Yes 4_Deep_abyss (meta-genome)   1 1
No Yes 5_050719P (meta-genome)   3 3
No Yes 5_Below_upper_mesopelagic (meta-genome)   1 1
No Yes Activated sludge plasmid pool Morges-2009 (Newbler) (meta-genome)   3 3
No Yes Air microbial communities Singapore indoor air filters 1 (meta-genome)   2 2
No Yes Air microbial communities Singapore indoor air filters 2 (meta-genome)   1 1
No Yes Bath Hot Springs, planktonic community (meta-genome)   1 1
No Yes Combined (meta-genome)   3 3
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   5 5
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)   1 1
No Yes Dump bottom (Dump bottom) (meta-genome)   2 2
No Yes Dump top (Dump top) (meta-genome)   2 2
No Yes Endophytic microbiome from Rice (meta-genome)   1 1
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #1 (meta-genome)   2 2
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   3 3
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   1 1
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   1 1
No Yes Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes   2 2
No Yes Guerrero Negro salt ponds hypersaline mat 02(H) (meta-genome)   2 2
No Yes Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome)   2 2
No Yes Guerrero Negro salt ponds hypersaline mat 05(O) (meta-genome)   2 2
No Yes Guerrero Negro salt ponds hypersaline mat 07(S) (meta-genome)   2 2
No Yes Guerrero Negro salt ponds hypersaline mat 08(T) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 09(Y) (meta-genome)   1 1
No Yes Hindgut microbiome of Nasutitermes sp. (Costa Rica) (meta-genome)   23 23
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP11 from Octopus Springs (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP12 from Calcite Springs, Tower Falls Region (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   4 4
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   4 4
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome)   5 5
No Yes Human Gut Community Subject 7 (meta-genome)   2 2
No Yes Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)   5 5
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   3 3
No Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome)   1 1
No Yes Marine anammox bioreactor enriched for Scalindua species (meta-genome)   3 3
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   48 48
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   13 13
No Yes Methylotrophic community from Lake Washington sediment Formate enrichment (meta-genome)   2 2
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   18 18
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   12 12
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)   3 3
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   4 4
No Yes Mouse Gut Community lean2 (meta-genome)   1 1
No Yes NCBI 2017_08 genome   4157 4147
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   9 9
No Yes Olavius algarvensis endosymbiont metagenome Delta1 (meta-genome)   2 2
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   3 3
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   3 3
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   7 7
No Yes Sludge/Australian, Phrap Assembly (meta-genome)   7 7
No Yes Sludge/US, Jazz Assembly (meta-genome)   6 6
No Yes Sludge/US, Phrap Assembly (meta-genome)   6 6
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   3 3
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   17 17
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   3 3
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   4 4
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   2 2
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   6 6
No Yes Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)   3 3
No Yes STRING v9.0.5 (STRING)   130 129
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome)   2 2
No Yes Termite Protist Endosymbiont Community (meta-genome)   2 2
No Yes Uniprot 2018_03 genome   2945 2937
No Yes Uranium Contaminated Groundwater FW106 (meta-genome)   1 1
No Yes Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)   2 2
No Yes Global Ocean Sampling Expedition (GOS)   20 20
No Yes NCBI plasmid sequences (Plasmids)   9 9
No Yes PDB chains (SCOP 1.75) (PDB)   1 1
No Yes Protein Data Bank (all PDB sequenc)   2 2
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   6 6
No Yes TargetDB (Targets)   4 4

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