SUPERFAMILY 1.75 HMM library and genome assignments server

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HIT/MYND zinc finger-like superfamily domain assignments
in
Methanohalophilus mahii DSM 5219


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Select to display   Genome       Domains   Proteins
No Yes ALL   68004 68004
No Yes Homo sapiens 76_38 Human 103 103
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 21 21
No Yes Gorilla gorilla 76_3.1 Western gorilla 30 30
No Yes Pongo abelii 76_2 Sumatran orangutan 22 22
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 24 24
No Yes Papio anubis 76 Olive baboon 23 23
No Yes Macaca mulatta 76_1 Rhesus monkey 45 45
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 54 54
No Yes Otolemur garnettii 76_3 Small-eared galago 22 22
No Yes Microcebus murinus 76_1 Gray mouse lemur 18 18
No Yes Rattus norvegicus 76_5.0 Norway rat 21 21
No Yes Mus musculus 76_38 House mouse 55 55
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 15 15
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 21 21
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 20 20
No Yes Cavia porcellus 76_3 Domestic guinea pig 20 20
No Yes Oryctolagus cuniculus 76_2 Rabbit 21 21
No Yes Ochotona princeps 76 American pika 16 16
No Yes Tupaia belangeri 76 Northern tree shrew 15 15
No Yes Sus scrofa 76_10.2 Pig 25 25
No Yes Bos taurus 76_3.1 Cattle 21 21
No Yes Ovis aries 76_3.1 Sheep 22 22
No Yes Vicugna pacos 76_1 Alpaca 14 14
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 19 19
No Yes Mustela putorius furo 76_1.0 Domestic ferret 19 19
No Yes Ailuropoda melanoleuca 76_1 Giant panda 25 25
No Yes Canis familiaris 76_3.1 Dog 29 29
No Yes Felis catus 76_6.2 Domestic cat 20 20
No Yes Equus caballus 76_2 Horse 20 20
No Yes Myotis lucifugus 76_2.0 Little brown bat 23 23
No Yes Pteropus vampyrus 76_1 Large flying fox 21 21
No Yes Sorex araneus 76_1 European shrew 11 11
No Yes Erinaceus europaeus 76 Western European hedgehog 14 14
No Yes Procavia capensis 76_1 Cape rock hyrax 19 19
No Yes Loxodonta africana 76_3 African savanna elephant 25 25
No Yes Echinops telfairi 76 Small Madagascar hedgehog 15 15
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 26 26
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 10 10
No Yes Macropus eugenii 76_1.0 Tammar wallaby 16 16
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 26 26
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 24 24
No Yes Ornithorhynchus anatinus 76_5 Platypus 15 15
No Yes Saccoglossus kowalevskii v3.0   44 40
No Yes Petromyzon marinus 76_7.0 Sea lamprey 9 9
No Yes Meleagris gallopavo 76_2 Turkey 18 18
No Yes Gallus gallus 76_4 Chicken 17 17
No Yes Anas platyrhynchos 76_1.0 Mallard 14 14
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 14 14
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 16 16
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 19 19
No Yes Anolis carolinensis 76_2.0 Green anole 17 17
No Yes Xenopus laevis African clawed frog 30 30
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 25 25
No Yes Latimeria chalumnae 76_1 Coelacanth 29 29
No Yes Lepisosteus oculatus 76 Spotted gar 26 26
No Yes Gadus morhua 76_1 Atlantic cod 20 20
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 26 26
No Yes Takifugu rubripes 76_4 Torafugu 52 52
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 27 27
No Yes Oryzias latipes 76_1 Japanese medaka 22 22
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 22 22
No Yes Poecilia formosa 76 Amazon molly 22 22
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 26 26
No Yes Astyanax mexicanus 76 Mexican tetra 25 25
No Yes Danio rerio 76_9 Zebrafish 33 33
No Yes Oikopleura dioica   16 16
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 17 17
No Yes Ciona intestinalis 76 Vase tunicate 16 16
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 22 22
No Yes Adineta vaga   38 36
No Yes Octopus bimaculoides 280   56 38
No Yes Crassostrea gigas 22 Pacific oyster 24 22
No Yes Lottia gigantea Owl limpet 22 21
No Yes Helobdella robusta   14 14
No Yes Capitella sp. I   24 24
No Yes Danaus plexippus OGS1.0 Monarch butterfly 20 20
No Yes Heliconius melpomene Postman butterfly 15 15
No Yes Bombyx mori Domestic silkworm 10 10
No Yes Nasonia vitripennis Jewel wasp 29 28
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 28 28
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 82 82
No Yes Linepithema humile v1.1 Argentine ant 21 21
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 20 20
No Yes Solenopsis invicta v.2.2.3 Red fire ant 22 22
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 20 20
No Yes Atta cephalotes v1.1   20 20
No Yes Camponotus floridanus v3.3 Florida carpenter ant 22 22
No Yes Lucilia cuprina Australian sheep blowfly 21 20
No Yes Drosophila grimshawi 1.3   20 20
No Yes Drosophila willistoni 1.3   24 23
No Yes Drosophila pseudoobscura 2.13   25 24
No Yes Drosophila persimilis 1.3   22 21
No Yes Drosophila suzukii   26 24
No Yes Drosophila yakuba 1.3   27 26
No Yes Drosophila simulans 1.3   24 23
No Yes Drosophila sechellia 1.3   24 24
No Yes Drosophila melanogaster 76_5 Fruit fly 39 38
No Yes Drosophila erecta 1.3   23 23
No Yes Drosophila ananassae 1.3   25 25
No Yes Drosophila virilis 1.2   21 21
No Yes Drosophila mojavensis 1.3   21 21
No Yes Megaselia scalaris 22   6 6
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 34 33
No Yes Culex pipiens quinquefasciatus Southern house mosquito 71 70
No Yes Anopheles darlingi 22 American malaria mosquito 15 14
No Yes Anopheles gambiae 49_3j African malaria mosquito 41 40
No Yes Tribolium castaneum 3.0 Red flour beetle 20 20
No Yes Pediculus humanus corporis (Early assembly) Human body louse 18 18
No Yes Acyrthosiphon pisum Pea aphid 16 16
No Yes Rhodnius prolixus 22   17 17
No Yes Daphnia pulex Common water flea 65 64
No Yes Strigamia maritima 22   27 27
No Yes Sarcoptes scabiei   9 9
No Yes Tetranychus urticae Two-spotted spider mite 14 14
No Yes Ixodes scapularis (Preliminary) Black-legged tick 12 12
No Yes Pristionchus pacificus   11 11
No Yes Meloidogyne incognita Southern root-knot nematode 10 10
No Yes Meloidogyne hapla   4 4
No Yes Onchocerca volvulus 22   10 10
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 13 13
No Yes Caenorhabditis japonica   12 12
No Yes Caenorhabditis brenneri   19 18
No Yes Caenorhabditis remanei   19 19
No Yes Caenorhabditis elegans 76_235 Roundworm 24 24
No Yes Caenorhabditis briggsae 2   16 16
No Yes Trichinella spiralis 22   9 9
No Yes Hymenolepis microstoma   10 10
No Yes Echinococcus multilocularis   10 10
No Yes Echinococcus granulosus   10 10
No Yes Taenia solium Pork tapeworm 9 9
No Yes Schistosoma mansoni   14 14
No Yes Mnemiopsis leidyi Sea walnut 22 22
No Yes Thelohanellus kitauei   2 2
No Yes Acropora digitifera v1.0   33 28
No Yes Nematostella vectensis 1.0 Starlet sea anemone 21 20
No Yes Hydra vulgaris   11 11
No Yes Amphimedon queenslandica   10 10
No Yes Trichoplax adhaerens   9 9
No Yes Proterospongia sp. ATCC 50818   16 16
No Yes Monosiga brevicollis   17 15
No Yes Sphaeroforma arctica JP610   41 35
No Yes Capsaspora owczarzaki ATCC 30864   18 18
No Yes Conidiobolus coronatus NRRL28638 v1.0   7 7
No Yes Mortierella verticillata NRRL 6337   20 20
No Yes Phycomyces blakesleeanus   14 14
No Yes Rhizopus oryzae RA 99-880   17 17
No Yes Mucor circinelloides   14 14
No Yes Rhizomucor miehei CAU432   12 12
No Yes Malassezia globosa CBS 7966   2 2
No Yes Sporisorium reilianum 22   4 4
No Yes Ustilago maydis   4 4
No Yes Mixia osmundae IAM 14324 v1.0   7 7
No Yes Cronartium quercuum f. sp. fusiforme G11 v1.0   6 6
No Yes Puccinia graminis f. sp. tritici CRL 75-36-700-3   6 6
No Yes Melampsora laricis-populina   8 8
No Yes Rhodotorula graminis WP1 v1.0   28 28
No Yes Sporobolomyces roseus IAM 13481   17 16
No Yes Microbotryum violaceum 22   10 10
No Yes Wallemia sebi v1.0   1 1
No Yes Sphaerobolus stellatus v1.0   45 45
No Yes Piloderma croceum F 1598 v1.0   97 97
No Yes Serpula lacrymans var. lacrymans S7.9   23 23
No Yes Coniophora puteana   46 45
No Yes Hydnomerulius pinastri v2.0   41 41
No Yes Paxillus rubicundulus Ve08.2h10 v1.0   22 22
No Yes Pisolithus microcarpus 441 v1.0   23 23
No Yes Pisolithus tinctorius Marx 270 v1.0   22 22
No Yes Scleroderma citrinum Foug A v1.0   20 20
No Yes Coprinopsis cinerea okayama7 130 v3   74 73
No Yes Pleurotus ostreatus Oyster mushroom 24 23
No Yes Amanita thiersii Skay4041 v1.0   16 16
No Yes Amanita muscaria Koide v1.0 Fly agaric 24 24
No Yes Galerina marginata v1.0   121 120
No Yes Hebeloma cylindrosporum h7 v2.0   65 65
No Yes Laccaria bicolor S238N-H82   50 49
No Yes Agaricus bisporus var. bisporus   18 18
No Yes Schizophyllum commune   118 116
No Yes Stereum hirsutum FP-91666 SS1 v1.0   103 103
No Yes Heterobasidion annosum   12 12
No Yes Gloeophyllum trabeumv1.0   45 45
No Yes Punctularia strigosozonata v1.0   32 32
No Yes Sebacina vermifera MAFF 305830 v1.0   42 41
No Yes Fomitiporia mediterranea v1.0   12 12
No Yes Tulasnella calospora AL13/4D v1.0   42 42
No Yes Postia placenta   25 25
No Yes Wolfiporia cocos MD-104 SS10 v1.0   24 24
No Yes Fomitopsis pinicolav1.0   57 57
No Yes Fomitopsis pinicola FP-58527 SS1 v3.0   57 57
No Yes Phanerochaete chrysosporium RP-78 2.1   25 25
No Yes Dichomitus squalens   35 35
No Yes Trametes versicolor v1.0   91 91
No Yes Tremella mesenterica Witches' butter 5 5
No Yes Daldinia eschscholzii EC12 v1.0   12 12
No Yes Apiospora montagnei NRRL 25634 v1.0   18 18
No Yes Magnaporthe poae ATCC 64411 22   5 5
No Yes Magnaporthe grisea 70-15   10 10
No Yes Podospora anserina   6 6
No Yes Sporotrichum thermophile ATCC 42464   8 8
No Yes Thielavia terrestris NRRL 8126   11 11
No Yes Chaetomium globosum CBS 148.51   7 7
No Yes Neurospora tetrasperma   9 9
No Yes Neurospora discreta FGSC 8579   6 6
No Yes Neurospora crassa OR74A   9 9
No Yes Cryphonectria parasitica Chestnut blight fungus 9 9
No Yes Verticillium albo-atrum VaMs.102   6 6
No Yes Verticillium dahliae VdLs.17   7 7
No Yes Acremonium alcalophilumv 1.0   9 8
No Yes Glomerella graminicola 22   9 9
No Yes Fusarium graminearum   7 7
No Yes Nectria haematococca mpVI   8 8
No Yes Fusarium oxysporum f. sp. lycopersici 4286   10 10
No Yes Fusarium verticillioides 7600   10 10
No Yes Trichoderma asperellum CBS 433.97 v1.0   10 10
No Yes Trichoderma atroviride   11 11
No Yes Trichoderma citrinoviride v1.0   11 11
No Yes Trichoderma reesei 1.2   12 12
No Yes Trichoderma virens Gv29-8   10 10
No Yes Trichoderma longibrachiatum ATCC 18648 v1.0   10 10
No Yes Trichoderma harzianum CBS 226.95 v1.0   14 14
No Yes Amorphotheca resinae v1.0 Creosote fungus 10 10
No Yes Botrytis cinerea B05.10   11 11
No Yes Sclerotinia sclerotiorum   7 6
No Yes Blumeria graminis 22   4 4
No Yes Didymella exigua CBS 183.55 v1.0   13 13
No Yes Leptosphaeria maculans 22   8 8
No Yes Setosphaeria turcica v1.0   15 15
No Yes Cochliobolus miyabeanus ATCC 44560 v1.0   14 14
No Yes Cochliobolus victoriae FI3 v1.0   15 15
No Yes Cochliobolus carbonum 26-R-13 v1.0   13 13
No Yes Cochliobolus heterostrophus Southern corn leaf blight pathogen 13 13
No Yes Alternaria brassicicola   8 8
No Yes Cochliobolus lunatus m118 v2.0   13 13
No Yes Pyrenophora teres f. teres 22   17 16
No Yes Pyrenophora tritici-repentis   11 11
No Yes Stagonospora nodorum   17 17
No Yes Mycosphaerella graminicola IPO323   26 20
No Yes Zasmidium cellare ATCC 36951 v1.0   23 22
No Yes Dothistroma septosporum   10 10
No Yes Septoria musiva v1.0   9 9
No Yes Mycosphaerella fijiensis CIRAD86   9 9
No Yes Aureobasidium pullulans var. subglaciale EXF-2481 v1.0   12 12
No Yes Paracoccidioides brasiliensis Pb18   2 2
No Yes Coccidioides posadasii RMSCC 3488   8 8
No Yes Coccidioides immitis RS   9 9
No Yes Ajellomyces dermatitidis SLH14081   5 5
No Yes Histoplasma capsulatum class NAmI strain WU24   6 6
No Yes Microsporum canis CBS 113480   4 4
No Yes Trichophyton equinum CBS 127.97   4 4
No Yes Trichophyton verrucosum HKI 0517   4 4
No Yes Arthroderma benhamiae CBS 112371   3 3
No Yes Trichophyton tonsurans CBS 112818   7 7
No Yes Trichophyton rubrum CBS 118892   7 7
No Yes Uncinocarpus reesii 1704   4 4
No Yes Aspergillus zonatus v1.0   9 9
No Yes Penicillium chrysogenum Wisconsin 54-1255   4 4
No Yes Penicillium chrysogenum v1.0   5 5
No Yes Aspergillus acidus v1.0   6 6
No Yes Aspergillus fumigatus Af293   6 6
No Yes Aspergillus brasiliensis v1.0   9 9
No Yes Aspergillus nidulans FGSC A4   5 5
No Yes Aspergillus sydowii v1.0   10 10
No Yes Aspergillus versicolor v1.0   12 12
No Yes Aspergillus glaucus   8 8
No Yes Aspergillus carbonarius ITEM 5010   12 12
No Yes Neosartorya fischeri NRRL 181   7 7
No Yes Aspergillus terreus NIH2624   8 8
No Yes Aspergillus tubingensis v1.0   8 8
No Yes Aspergillus wentii v1.0   13 13
No Yes Aspergillus oryzae RIB40   6 6
No Yes Aspergillus niger 22   8 8
No Yes Aspergillus niger ATCC 1015   4 4
No Yes Aspergillus flavus NRRL3357   7 7
No Yes Aspergillus clavatus NRRL 1   6 6
No Yes Penicillium marneffei ATCC 18224   11 11
No Yes Tuber melanosporum Mel28 22   5 5
No Yes Tuber melanosporum Vittad Perigord truffle 5 5
No Yes Hansenula polymorpha v2.0   2 2
No Yes Dekkera bruxellensis CBS 2499 v2.0   4 4
No Yes Pichia membranifaciensv1.0   3 3
No Yes Candida tanzawaensis NRRL Y-17324 v1.0   3 3
No Yes Candida dubliniensis CD36   3 3
No Yes Candida tropicalis MYA-3404   3 3
No Yes Candida parapsilosis   4 4
No Yes Candida albicans SC5314   3 3
No Yes Lodderomyces elongisporus NRRL YB-4239   3 3
No Yes Babjeviella inositovora NRRL Y-12698 v1.0   5 5
No Yes Pichia stipitis CBS 6054   4 4
No Yes Candida guilliermondii ATCC 6260   3 3
No Yes Hyphopichia burtonii NRRL Y-1933 v1.0   5 5
No Yes Debaromyces hansenii   5 5
No Yes Wickerhamomyces anomalus   4 4
No Yes Pichia pastoris GS115   4 4
No Yes Hanseniaspora valbyensis NRRL Y-1626 v1.1   2 2
No Yes Yarrowia lipolytica CLIB122   5 5
No Yes Candida lusitaniae ATCC 42720   3 3
No Yes Metschnikowia bicuspidata NRRL YB-4993 v1.0   3 3
No Yes Vanderwaltozyma polyspora DSM 70294   3 3
No Yes Candida glabrata CBS138   3 3
No Yes Kluyveromyces thermotolerans CBS 6340   4 4
No Yes Lachancea kluyveri   4 4
No Yes Kluyveromyces waltii   4 4
No Yes Ashbya gossypii ATCC 10895   3 3
No Yes Zygosaccharomyces rouxii   4 4
No Yes Saccharomyces mikatae MIT   3 3
No Yes Saccharomyces paradoxus MIT   2 2
No Yes Saccharomyces cerevisiae 76 Baker's yeast 3 3
No Yes Saccharomyces bayanus MIT   2 2
No Yes Kluyveromyces lactis   3 3
No Yes Schizosaccharomyces cryophilus OY26 22   3 3
No Yes Schizosaccharomyces octosporus yFS286   3 3
No Yes Schizosaccharomyces japonicus yFS275   3 3
No Yes Schizosaccharomyces pombe Fission yeast 3 3
No Yes Catenaria anguillulae PL171 v1.0   15 15
No Yes Allomyces macrogynus ATCC 38327   17 17
No Yes Spizellomyces punctatus DAOM BR117   16 16
No Yes Dictyostelium discoideum   21 21
No Yes Dictyostelium purpureum   14 14
No Yes Entamoeba dispar 1.2   4 4
No Yes Entamoeba invadens 1.2   3 3
No Yes Entamoeba histolytica 1   3 3
No Yes Selaginella moellendorffii   26 26
No Yes Pinus taeda Loblolly pine 7 7
No Yes Picea abies Norway spruce 6 6
No Yes Eucalyptus grandis v201 Rose gum 26 26
No Yes Theobroma cacao B97-61/B2 v1 Cacao 18 18
No Yes Gossypium raimondii v221   44 44
No Yes Citrus clementina v165   26 26
No Yes Citrus sinensis v154 Sweet orange 26 26
No Yes Thellungiella halophila v173   15 15
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 22 22
No Yes Capsella rubella v183   14 14
No Yes Arabidopsis lyrata Lyrate rockcress 15 15
No Yes Arabidopsis thaliana 10 Thale cress 18 18
No Yes Carica papaya Papaya 14 14
No Yes Medicago truncatula Barrel medic 32 30
No Yes Phaseolus vulgaris v186 French bean 29 25
No Yes Glycine max v109 Soybean 44 43
No Yes Cucumis sativus v122 Cucumber 19 19
No Yes Fragaria vesca Wild strawberry 10 10
No Yes Malus domestica v196 Apple 26 26
No Yes Prunus persica v139 Peach 15 15
No Yes Linum usitatissimum v200 Flax 16 16
No Yes Manihot esculenta v147 Cassava 19 19
No Yes Populus trichocarpa v156 Black cottonwood 24 24
No Yes Vitis vinifera Wine grape 18 18
No Yes Mimulus guttatus v140 Spotted monkey flower 13 13
No Yes Solanum lycopersicum v.2.3 Tomato 13 13
No Yes Solanum tuberosum Potato 12 12
No Yes Actinidia chinensis Hongyang   10 10
No Yes Aquilegia coerulea v195   21 21
No Yes Triticum urartu 22   11 11
No Yes Triticum aestivum 22 Bread wheat 29 29
No Yes Aegilops tauschii 22   7 7
No Yes Brachypodium distachyon Stiff brome 16 16
No Yes Oryza barthii 22 African wild rice 11 11
No Yes Oryza meridionalis 22   15 15
No Yes Oryza glumaepatula 22   19 19
No Yes Oryza glaberrima African rice 9 9
No Yes Oryza punctata 22   15 15
No Yes Oryza nivara 22   22 22
No Yes Oryza brachyantha 22 Malo sina 8 8
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 16 16
No Yes Oryza sativa v193 Rice 16 16
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 8 8
No Yes Panicum virgatum v202 Switchgrass 18 18
No Yes Setaria italica v164 Foxtail millet 13 13
No Yes Zea mays subsp. mays Maize 33 33
No Yes Zea mays v181 Maize 36 36
No Yes Sorghum bicolor Sorghum 12 12
No Yes Musa balbisiana Balbis banana 17 17
No Yes Musa acuminata 22 Wild Malaysian banana 27 27
No Yes Amborella trichopoda 22   10 10
No Yes Physcomitrella patens   14 14
No Yes Coccomyxa subellipsoidea sp. C-169 v2   22 21
No Yes Asterochloris sp. Cgr/DA1pho v1.0   2 2
No Yes Chlorella variabilis sp. NC64A   62 62
No Yes Chlorella vulgaris   21 21
No Yes Volvox carteri f. nagariensis   14 14
No Yes Volvox carteri v199   18 18
No Yes Chlamydomonas reinhardtii 4.0   85 85
No Yes Ostreococcus sp. RCC809   5 5
No Yes Ostreococcus lucimarinus CCE9901   6 6
No Yes Ostreococcus tauri   6 6
No Yes Bathycoccus prasinos   7 7
No Yes Micromonas sp. RCC299   21 21
No Yes Micromonas pusilla CCMP1545 v3.0   42 41
No Yes Cyanidioschyzon merolae strain 10D 22   3 3
No Yes Cyanidioschyzon merolae   3 3
No Yes Porphyridium purpureum 02_2012   5 5
No Yes Thecamonas trahens ATCC 50062   20 19
No Yes Bigelowiella natans CCMP2755 22   17 17
No Yes Giardia lamblia 2.3   2 2
No Yes Cyanophora paradoxa   23 22
No Yes Leishmania mexicana 2.4   11 10
No Yes Leishmania major strain Friedlin   11 11
No Yes Leishmania infantum JPCM5 2.4   11 11
No Yes Leishmania braziliensis MHOM/BR/75/M2904 2.4   11 11
No Yes Trypanosoma vivax   8 8
No Yes Trypanosoma cruzi strain CL Brener   8 8
No Yes Trypanosoma congolense 2.4   10 10
No Yes Trypanosoma brucei gambiense v4.1   9 9
No Yes Trypanosoma brucei TREU927 v4.1   9 9
No Yes Ectocarpus siliculosus   20 20
No Yes Aureococcus anophagefferens   63 58
No Yes Albugo laibachii 22   18 18
No Yes Pythium iwayamai DAOM BR242034 22   15 15
No Yes Pythium arrhenomanes ATCC 12531 22   23 23
No Yes Pythium ultimum v1.7-2   19 19
No Yes Pythium aphanidermatum DAOM BR444 22   26 26
No Yes Pythium irregulare DAOM BR486 22   18 18
No Yes Pythium vexans DAOM BR484 22   19 19
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 21 21
No Yes Phytophthora sojae 1.1   25 24
No Yes Phytophthora infestans T30-4   21 21
No Yes Phytophthora capsici   14 14
No Yes Hyaloperonospora arabidopsidis 22   18 18
No Yes Phaeodactylum tricornutumCCAP 1055/1   11 11
No Yes Fragilariopsis cylindrus   157 153
No Yes Thalassiosira pseudonana CCMP1335   8 8
No Yes Perkinsus marinus ATCC 50983   13 13
No Yes Paramecium tetraurelia   33 33
No Yes Tetrahymena thermophila SB210 1   10 10
No Yes Ichthyophthirius multifiliis strain G5   3 3
No Yes Cryptosporidium hominis   2 2
No Yes Cryptosporidium muris   5 5
No Yes Cryptosporidium parvum Iowa II   4 4
No Yes Neospora caninum   6 6
No Yes Toxoplasma gondii VEG   6 6
No Yes Toxoplasma gondii ME49   6 6
No Yes Toxoplasma gondii GT1   6 6
No Yes Babesia bovis T2Bo   6 6
No Yes Theileria parva   2 2
No Yes Theileria annulata   3 3
No Yes Plasmodium falciparum 3D7   6 6
No Yes Plasmodium vivax SaI-1 7.0   5 5
No Yes Plasmodium knowlesi strain H   5 5
No Yes Plasmodium yoelii ssp. yoelii 1   4 4
No Yes Plasmodium chabaudi   5 5
No Yes Plasmodium berghei ANKA   6 6
No Yes Symbiodinium minutum clade B1 v1.2   36 35
No Yes Naegleria gruberi   16 16
No Yes Trichomonas vaginalis   4 4
No Yes Guillardia theta CCMP2712 v1.0   7 7
No Yes Emiliania huxleyi CCMP1516   44 44
No Yes Staphylothermus hellenicus DSM 12710   1 1
No Yes Halorubrum lacusprofundi ATCC 49239   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 39 39
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 30 29
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 43 42
No Yes Ascaris suum Victoria/Ghent Pig roundworm 12 12
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 19 19
No Yes Cryptococcus neoformans var. grubii H99   3 3
No Yes Cryptococcus neoformans B-3501A   3 3
No Yes Cryptococcus neoformans JEC21   1 1
No Yes Paracoccidioides brasiliensis Pb01   4 4
No Yes Paracoccidioides brasiliensis Pb03   6 6
No Yes Coccidioides posadasii str. Silveira   7 7
No Yes Coccidioides immitis RMSCC 3703   5 5
No Yes Coccidioides immitis RMSCC 2394   9 9
No Yes Coccidioides immitis H538.4   7 7
No Yes Ajellomyces dermatitidis ER-3   4 4
No Yes Histoplasma capsulatum H143   6 6
No Yes Histoplasma capsulatum H88   7 7
No Yes Histoplasma capsulatum G186AR   6 6
No Yes Aspergillus fumigatus A1163   7 7
No Yes Candida albicans WO-1   3 3
No Yes Saccharomyces cerevisiae UC5   3 3
No Yes Saccharomyces cerevisiae PW5   3 3
No Yes Saccharomyces cerevisiae FL100   1 1
No Yes Saccharomyces cerevisiae CLIB324   1 1
No Yes Saccharomyces cerevisiae CBS7960   1 1
No Yes Saccharomyces cerevisiae YJM269   2 2
No Yes Saccharomyces cerevisiae T7   3 3
No Yes Saccharomyces cerevisiae FostersB   2 2
No Yes Saccharomyces cerevisiae FostersO   3 3
No Yes Saccharomyces cerevisiae VL3   3 3
No Yes Saccharomyces cerevisiae Vin13   3 3
No Yes Saccharomyces cerevisiae LalvinQA23   3 3
No Yes Saccharomyces cerevisiae AWRI796   3 3
No Yes Saccharomyces cerevisiae Sigma1278b   3 3
No Yes Saccharomyces cerevisiae W303   3 3
No Yes Saccharomyces cerevisiae JAY291   3 3
No Yes Saccharomyces cerevisiae AWRI1631   1 1
No Yes Saccharomyces cerevisiae YPS163   2 2
No Yes Saccharomyces cerevisiae T73   2 2
No Yes Saccharomyces cerevisiae CLIB215   2 2
No Yes Saccharomyces cerevisiae YJM789   3 3
No Yes Saccharomyces cerevisiae YJM789   3 3
No Yes Saccharomyces cerevisiae RM11-1a   3 3
No Yes Saccharomyces cerevisiae RM11-1a   3 3
No Yes Saccharomyces cerevisiae SGD (SGD) Baker's yeast 3 3
No Yes Schizosaccharomyces pombe 972h-   3 3
No Yes Batrachochytrium dendrobatidis JEL423   8 8
No Yes Batrachochytrium dendrobatidis JAM81   10 10
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 14 14
No Yes Hordeum vulgare 22 Domesticated barley 33 33
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 11 11
No Yes Trypanosoma brucei Lister 427 v4.1   9 9
No Yes Neospora caninum Nc-Liverpool 6.2   6 6
No Yes Plasmodium falciparum HB3   6 6
No Yes Plasmodium falciparum Dd2   4 4
No Yes Homo sapiens 75_37 (old version GRC) Human 106 106
No Yes Homo sapiens (NCBI version) Human 55 55
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 21 21
No Yes Heliconius numata (Incomplete)   3 3
No Yes Loa loa v3.3 (Request) Eye worm 11 11
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 8 8
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 9 9
No Yes Moniliophthora perniciosa FA553 (Genome survey)   21 21
No Yes Picea sitchensis (Incomplete) Sitka spruce 1 1
No Yes Lotus japonicus (Early assembly)   13 13
No Yes Malus x domestica (Duplicate) Apple 26 26
No Yes Ricinus communis (Early assembly) Castor bean 11 11
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   17 17
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 13 13
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 13 13
No Yes Phoenix dactylifera (Early draft) Date palm 1 1
No Yes Homo sapiens 69_37 Human 24 24
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 21 21
No Yes Gorilla gorilla 69_3.1 Western gorilla 22 22
No Yes Pongo abelii 69_2 Sumatran orangutan 22 22
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 21 21
No Yes Macaca mulatta 69_1 Rhesus monkey 24 24
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 24 24
No Yes Otolemur garnettii 69_3 Small-eared galago 22 22
No Yes Microcebus murinus 69_1 Gray mouse lemur 18 18
No Yes Rattus norvegicus 69_3.4 Norway rat 20 20
No Yes Mus musculus 69_38 House mouse 22 22
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 15 15
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 21 21
No Yes Cavia porcellus 69_3 Domestic guinea pig 20 20
No Yes Oryctolagus cuniculus 69_2 Rabbit 19 19
No Yes Ochotona princeps 69 American pika 16 16
No Yes Tupaia belangeri 69 Northern tree shrew 15 15
No Yes Sus scrofa 69_10.2 Pig 21 21
No Yes Bos taurus 69_3.1 Cattle 20 20
No Yes Vicugna pacos 69_1 Alpaca 14 14
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 19 19
No Yes Mustela putorius furo 69_1.0 Domestic ferret 19 19
No Yes Ailuropoda melanoleuca 69_1 Giant panda 22 22
No Yes Canis familiaris 69_3.1 Dog 21 21
No Yes Felis catus 69 Domestic cat 16 16
No Yes Equus caballus 69_2 Horse 18 18
No Yes Myotis lucifugus 69_2.0 Little brown bat 19 19
No Yes Pteropus vampyrus 69_1 Large flying fox 21 21
No Yes Sorex araneus 69_1 European shrew 11 11
No Yes Erinaceus europaeus 69 Western European hedgehog 14 14
No Yes Procavia capensis 69_1 Cape rock hyrax 19 19
No Yes Loxodonta africana 69_3 African savanna elephant 18 18
No Yes Echinops telfairi 69 Small Madagascar hedgehog 15 15
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 13 13
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 10 10
No Yes Macropus eugenii 69_1.0 Tammar wallaby 16 16
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 17 17
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 20 20
No Yes Ornithorhynchus anatinus 69_5 Platypus 15 15
No Yes Petromyzon marinus 69_7.0 Sea lamprey 9 9
No Yes Meleagris gallopavo 69_2 Turkey 14 14
No Yes Gallus gallus 69_2 Chicken 18 18
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 13 13
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 17 17
No Yes Anolis carolinensis 69_2.0 Green anole 17 17
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 20 20
No Yes Latimeria chalumnae 69_1 Coelacanth 23 23
No Yes Gadus morhua 69_1 Atlantic cod 20 20
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 23 23
No Yes Takifugu rubripes 69_4 Torafugu 21 21
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 20 20
No Yes Oryzias latipes 69_1 Japanese medaka 19 19
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 22 22
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 21 21
No Yes Danio rerio 69_9 Zebrafish 25 25
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 11 11
No Yes Ciona intestinalis 69 Vase tunicate 16 16
No Yes Drosophila melanogaster 69_5 Fruit fly 24 23
No Yes Caenorhabditis elegans 69_215 Roundworm 15 15
No Yes Saccharomyces cerevisiae 69_4 Baker's yeast 3 3
No Yes Arabidopsis thaliana 10 Thale cress 14 14
No Yes Core Eukaryotic Genes 458 (CEGMA)   1 1
No Yes Dump bottom (Dump bottom) (meta-genome)   1 1
No Yes Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes   1 1
No Yes Human Gut Community Subject 7 (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   2 2
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)   2 2
No Yes NCBI 2017_08 genome   23618 23408
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   1 1
No Yes Protozoadb 2010_08 (Protozoadb)   186 186
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   3 3
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   1806 1785
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   2 2
No Yes Uniprot 2018_03 genome   25833 25508
No Yes Global Ocean Sampling Expedition (GOS)   214 212
No Yes NCBI viral sequences (Viral)   9 9
No Yes PDB chains (SCOP 1.75) (PDB)   5 5
No Yes Protein Data Bank (all PDB sequenc)   19 19
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   24 24
No Yes TargetDB (Targets)   86 86
No Yes UniProt viral sequences (Viral)   3 3

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