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TSP9-like superfamily domain assignments
in
all genomes

Network of domain occurrence in all genomes


Assignment details

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25 selected genomes have 38 significant domains in 38 proteins.

Showing genomes 1 to 25 of 65
  1 2 3   Next Last

Picea abies has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
MA_125282g0010   1.83e-21   16-91   TSP9-like  
MA_250413g0010   1.44e-22   19-99   TSP9-like  

Theobroma cacao B97-61/B2 v1 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
Tc09_g030230   8.37e-25   20-91   TSP9-like  
 
Weak hits:
Tc00_g053380   0.034   43-89   TSP9-like  

Gossypium raimondii v221 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
Gorai.003G124000.1|PACid:26799626   4.32e-22   22-91   TSP9-like  
Gorai.009G093000.1|PACid:26768751   3.4e-27   21-98   TSP9-like  

Citrus clementina v165 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
clementine0.9_026381m|PACid:19281786   2.09e-26   21-98   TSP9-like  

Citrus sinensis v154 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
orange1.1g034302m|PACid:18111177   2.09e-26   21-98   TSP9-like  

Thellungiella halophila v173 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
Thhalv10010831m|PACid:20206778   1.24e-16   24-117   TSP9-like  
Thhalv10015099m|PACid:20204804   1.96e-24   26-102   TSP9-like  
 
Weak hits:
Thhalv10004767m|PACid:20199060   0.0157   140-201   TSP9-like  

Brassica rapa Chiifu-401 1.2 has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
Bra002617   7.45e-24   26-101   TSP9-like  
Bra018169   1.83e-20   23-104   TSP9-like  
Bra019494   6.93e-18   24-103   TSP9-like  

Capsella rubella v183 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
Carubv10019272m|PACid:20886858   1.12e-20   24-106   TSP9-like  
 
Weak hits:
Carubv10011771m|PACid:20891507   0.0392   41-107   TSP9-like  

Arabidopsis lyrata has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
jgi|Araly1|905937|scaffold_501641.1   7.59e-21   24-100   TSP9-like  

Arabidopsis thaliana 10 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
AT3G47070.1   3.4e-23   24-100   TSP9-like  
 
Weak hits:
AT3G01710.1   0.0432   154-220   TSP9-like  
AT3G01710.2   0.0432   154-220   TSP9-like  

Carica papaya has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
evm.TU.supercontig_112.48   4.71e-24   20-90   TSP9-like  

Medicago truncatula has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
Medtr3g462990.1   7.98e-23   27-95   TSP9-like  
Medtr5g069990.1   8.37e-21   27-105   TSP9-like  
 
Weak hits:
Medtr2g073650.1   0.0942   31-71   TSP9-like  
Medtr2g073650.2   0.0732   31-71   TSP9-like  

Phaseolus vulgaris v186 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
Phvulv091007677m|PACid:23541523   1.27e-23   20-91   TSP9-like  

Glycine max v109 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
Glyma18g07310.1|PACid:16308186   2.75e-23   20-92   TSP9-like  

Cucumis sativus v122 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
Cucsa.139120.1|PACid:16963333   1.31e-20   20-97   TSP9-like  

Fragaria vesca has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gene07997   0.0000000000000314   25-86   TSP9-like  
 
Weak hits:
gene14779   0.0889   27-85   TSP9-like  
gene19042   0.051   17-54   TSP9-like  

Malus domestica v196 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
MDP0000260620|PACid:22634498   0.00000000000536   24-73   TSP9-like  
MDP0000299780|PACid:22682296   1.23e-20   24-92   TSP9-like  
 
Weak hits:
MDP0000320202|PACid:22645082   0.0942   50-90   TSP9-like  

Prunus persica v139 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
ppa013971m|PACid:17657001   1.07e-21   24-93   TSP9-like  
 
Weak hits:
ppa004513m|PACid:17643648   0.0876   18-62   TSP9-like  
ppa022555m|PACid:17658146   0.0392   13-78   TSP9-like  

Linum usitatissimum v200 has 4 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
Lus10001204|PACid:23173055   9.15e-22   23-97   TSP9-like  
Lus10005866|PACid:23176930   9.15e-22   23-97   TSP9-like  
Lus10018216|PACid:23179383   0.0000000000000301   18-67   TSP9-like  
Lus10040689|PACid:23157635   3.4e-20   19-103   TSP9-like  
 
Weak hits:
Lus10022348|PACid:23139408   0.0157   107-158   TSP9-like  

Manihot esculenta v147 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
cassava4.1_020082m|PACid:17966461   2.22e-25   20-96   TSP9-like  
cassava4.1_020123m|PACid:17991944   6.41e-25   20-95   TSP9-like  

Populus trichocarpa v156 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
POPTR_0001s25670.1|PACid:18234411   1.57e-25   20-91   TSP9-like  
POPTR_0009s04820.1|PACid:18228269   2.48e-25   18-90   TSP9-like  

Vitis vinifera has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
GSVIVT01024785001   2.22e-20   13-72   TSP9-like  
 
Weak hits:
GSVIVT01013021001   0.0458   41-90   TSP9-like  

Mimulus guttatus v140 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
mgv1a016754m|PACid:17670946   2.09e-18   26-108   TSP9-like  
 
Weak hits:
mgv1a013544m|PACid:17691159   0.0471   144-186   TSP9-like  

Solanum lycopersicum v.2.3 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
Solyc06g076790.1.1   6.67e-22   30-106   TSP9-like  

Solanum tuberosum has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
PGSC0003DMP400007449   4.18e-18   31-100   TSP9-like  
PGSC0003DMP400052971   5.62e-22   30-103   TSP9-like  
 
Weak hits:
PGSC0003DMP400065736   0.0209   156-212   TSP9-like  

  1 2 3   Next Last
Showing genomes 1 to 25 of 65

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Select to display   Genome       Domains   Proteins
No Yes ALL   435 435
No Yes Picea abies Norway spruce 2 2
No Yes Theobroma cacao B97-61/B2 v1 Cacao 1 1
No Yes Gossypium raimondii v221   2 2
No Yes Citrus clementina v165   1 1
No Yes Citrus sinensis v154 Sweet orange 1 1
No Yes Thellungiella halophila v173   2 2
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 3 3
No Yes Capsella rubella v183   1 1
No Yes Arabidopsis lyrata Lyrate rockcress 1 1
No Yes Arabidopsis thaliana 10 Thale cress 1 1
No Yes Carica papaya Papaya 1 1
No Yes Medicago truncatula Barrel medic 2 2
No Yes Phaseolus vulgaris v186 French bean 1 1
No Yes Glycine max v109 Soybean 1 1
No Yes Cucumis sativus v122 Cucumber 1 1
No Yes Fragaria vesca Wild strawberry 1 1
No Yes Malus domestica v196 Apple 2 2
No Yes Prunus persica v139 Peach 1 1
No Yes Linum usitatissimum v200 Flax 4 4
No Yes Manihot esculenta v147 Cassava 2 2
No Yes Populus trichocarpa v156 Black cottonwood 2 2
No Yes Vitis vinifera Wine grape 1 1
No Yes Mimulus guttatus v140 Spotted monkey flower 1 1
No Yes Solanum lycopersicum v.2.3 Tomato 1 1
No Yes Solanum tuberosum Potato 2 2
No Yes Actinidia chinensis Hongyang   1 1
No Yes Aquilegia coerulea v195   1 1
No Yes Triticum aestivum 22 Bread wheat 2 2
No Yes Brachypodium distachyon Stiff brome 1 1
No Yes Oryza barthii 22 African wild rice 1 1
No Yes Oryza meridionalis 22   1 1
No Yes Oryza glumaepatula 22   2 2
No Yes Oryza glaberrima African rice 2 2
No Yes Oryza punctata 22   2 2
No Yes Oryza nivara 22   2 2
No Yes Oryza brachyantha 22 Malo sina 2 2
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 2 2
No Yes Oryza sativa v193 Rice 2 2
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 2 2
No Yes Panicum virgatum v202 Switchgrass 1 1
No Yes Setaria italica v164 Foxtail millet 2 2
No Yes Zea mays subsp. mays Maize 10 10
No Yes Zea mays v181 Maize 10 10
No Yes Sorghum bicolor Sorghum 2 2
No Yes Musa balbisiana Balbis banana 2 2
No Yes Musa acuminata 22 Wild Malaysian banana 1 1
No Yes Amborella trichopoda 22   1 1
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 1 1
No Yes Hordeum vulgare 22 Domesticated barley 1 1
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 2 2
No Yes Picea sitchensis (Incomplete) Sitka spruce 1 1
No Yes Lotus japonicus (Early assembly)   1 1
No Yes Malus x domestica (Duplicate) Apple 2 2
No Yes Ricinus communis (Early assembly) Castor bean 1 1
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   4 4
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 1 1
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 1 1
No Yes Arabidopsis thaliana 10 Thale cress 1 1
No Yes NCBI 2017_08 genome   125 125
No Yes STRING v9.0.5 (STRING)   12 12
No Yes Uniprot 2018_03 genome   151 151
No Yes PDB chains (SCOP 1.75) (PDB)   1 1
No Yes Protein Data Bank (all PDB sequenc)   1 1
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   2 2
No Yes TargetDB (Targets)   3 3

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