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IVS-encoded protein-like superfamily domain assignments
in
Candidatus Nitrospira defluvii

Assignment details

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Candidatus Nitrospira defluvii has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|302039573|ref|YP_003799895.1|   2.22e-37   5-117   IVS-encoded protein-like  

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Select to display   Genome       Domains   Proteins
No Yes ALL   28936 28936
No Yes Daphnia pulex Common water flea 1 1
No Yes Volvox carteri f. nagariensis   1 1
No Yes Leptolyngbya sp. PCC 7376   1 1
No Yes Pseudanabaena sp. PCC 7367   2 2
No Yes Acaryochloris marina MBIC11017   1 1
No Yes Thermosynechococcus sp. NK55   1 1
No Yes Microcoleus sp. PCC 7113   2 2
No Yes Trichodesmium erythraeum IMS101   1 1
No Yes Cyanothece sp. PCC 8802   1 1
No Yes Gloeocapsa sp. PCC 7428   3 3
No Yes Halothece sp. PCC 7418   1 1
No Yes Microcystis aeruginosa NIES-843   2 2
No Yes Rivularia sp. PCC 7116   4 4
No Yes Calothrix sp. PCC 7507   6 6
No Yes Anabaena variabilis ATCC 29413   2 2
No Yes 'Nostoc azollae' 0708   1 1
No Yes Nostoc sp. PCC 7107   1 1
No Yes Nostoc punctiforme PCC 73102   10 10
No Yes Nostoc sp. PCC 7120   6 6
No Yes Nostoc sp. PCC 7524   13 13
No Yes Anabaena sp. 90   4 4
No Yes Caldilinea aerophila DSM 14535 = NBRC 104270   2 2
No Yes Dehalogenimonas lykanthroporepellens BL-DC-9   1 1
No Yes Sphaerobacter thermophilus DSM 20745   1 1
No Yes Herpetosiphon aurantiacus DSM 785   1 1
No Yes Roseiflexus sp. RS-1   2 2
No Yes Roseiflexus castenholzii DSM 13941   3 3
No Yes Truepera radiovictrix DSM 17093   2 2
No Yes Deinococcus geothermalis DSM 11300   1 1
No Yes Oceanithermus profundus DSM 14977   1 1
No Yes Meiothermus silvanus DSM 9946   1 1
No Yes Megasphaera elsdenii DSM 20460   2 2
No Yes Acidaminococcus fermentans DSM 20731   2 2
No Yes Clostridium clariflavum DSM 19732   3 3
No Yes Clostridium thermocellum ATCC 27405   1 1
No Yes Ruminococcus sp.   1 1
No Yes Thermincola potens JR   1 1
No Yes Syntrophobotulus glycolicus DSM 8271   4 4
No Yes Desulfotomaculum reducens MI-1   10 10
No Yes Desulfotomaculum acetoxidans DSM 771   1 1
No Yes Desulfotomaculum carboxydivorans CO-1-SRB   1 1
No Yes Eubacterium limosum KIST612   1 1
No Yes Syntrophothermus lipocalidus DSM 12680   1 1
No Yes Syntrophomonas wolfei subsp. wolfei str. Goettingen   1 1
No Yes Alkaliphilus metalliredigens QYMF   1 1
No Yes Clostridium ljungdahlii DSM 13528   1 1
No Yes Clostridium kluyveri DSM 555   1 1
No Yes Clostridium tetani E88   1 1
No Yes Clostridium botulinum A str. ATCC 3502   1 1
No Yes Caldicellulosiruptor owensensis OL   1 1
No Yes Carboxydothermus hydrogenoformans Z-2901   1 1
No Yes Thermoanaerobacter mathranii subsp. mathranii str. A3   1 1
No Yes Thermoanaerobacter italicus Ab9   1 1
No Yes Thermoanaerobacter wiegelii Rt8.B1   1 1
No Yes Bacillus pseudofirmus OF4   2 2
No Yes Bacillus cellulosilyticus DSM 2522   2 1
No Yes Candidatus Cloacamonas acidaminovorans   5 5
No Yes Gemmatimonas aurantiaca T-27   2 2
No Yes Melioribacter roseus P3M   4 4
No Yes Ignavibacterium album JCM 16511   9 9
No Yes Pelodictyon phaeoclathratiforme BU-1   3 3
No Yes Chlorobium phaeobacteroides DSM 266   4 4
No Yes Chlorobium limicola DSM 245   4 4
No Yes Chlorobaculum parvum NCIB 8327   2 2
No Yes Chlorobium tepidum TLS   1 1
No Yes Prosthecochloris aestuarii DSM 271   7 7
No Yes Haliscomenobacter hydrossis DSM 1100   9 9
No Yes Saprospira grandis str. Lewin   1 1
No Yes Niastella koreensis GR20-10   7 7
No Yes Chitinophaga pinensis DSM 2588   1 1
No Yes Salinibacter ruber M8   5 5
No Yes Flexibacter litoralis DSM 6794   2 2
No Yes Belliella baltica DSM 15883   4 4
No Yes Cyclobacterium marinum DSM 745   2 2
No Yes Marivirga tractuosa DSM 4126   5 5
No Yes Fibrella aestuarina   2 2
No Yes Leadbetterella byssophila DSM 17132   3 3
No Yes Dyadobacter fermentans DSM 18053   2 2
No Yes Cytophaga hutchinsonii ATCC 33406   4 4
No Yes Spirosoma linguale DSM 74   1 1
No Yes Runella slithyformis DSM 19594   8 8
No Yes Tannerella forsythia ATCC 43037   4 4
No Yes Paludibacter propionicigenes WB4   10 10
No Yes Odoribacter splanchnicus DSM 20712   3 3
No Yes Bacteroides sp. CF50   2 2
No Yes Prevotella melaninogenica ATCC 25845   1 1
No Yes Prevotella intermedia 17   1 1
No Yes Prevotella ruminicola 23   3 3
No Yes Porphyromonas asaccharolytica DSM 20707   1 1
No Yes Alistipes finegoldii DSM 17242   1 1
No Yes Bacteroides salanitronis DSM 18170   1 1
No Yes Bacteroides helcogenes P 36-108   1 1
No Yes Bacteroides vulgatus ATCC 8482   1 1
No Yes Bacteroides thetaiotaomicron VPI-5482   2 2
No Yes Bacteroides fragilis YCH46   1 1
No Yes Pedobacter saltans DSM 12145   8 8
No Yes Solitalea canadensis DSM 3403   4 4
No Yes Sphingobacterium sp. 21   6 6
No Yes Fluviicola taffensis DSM 16823   3 3
No Yes Owenweeksia hongkongensis DSM 17368   6 6
No Yes Zunongwangia profunda SM-A87   4 4
No Yes Krokinobacter sp. 4H-3-7-5   3 3
No Yes Gramella forsetii KT0803   9 9
No Yes Lacinutrix sp. 5H-3-7-4   2 2
No Yes Robiginitalea biformata HTCC2501   1 1
No Yes Croceibacter atlanticus HTCC2559   1 1
No Yes Aequorivita sublithincola DSM 14238   5 5
No Yes Zobellia galactanivorans   4 4
No Yes Muricauda ruestringensis DSM 13258   6 6
No Yes Cellulophaga algicola DSM 14237   2 2
No Yes Cellulophaga lytica DSM 7489   1 1
No Yes Flavobacteriaceae bacterium 3519-10   4 4
No Yes Polaribacter sp. MED152   2 2
No Yes Riemerella anatipestifer ATCC 11845 = DSM 15868   1 1
No Yes Capnocytophaga canimorsus Cc5   4 4
No Yes Capnocytophaga ochracea DSM 7271   3 3
No Yes Weeksella virosa DSM 16922   2 2
No Yes Flavobacterium indicum GPTSA100-9   7 7
No Yes Flavobacterium psychrophilum JIP02/86   7 7
No Yes Flavobacterium branchiophilum FL-15   4 4
No Yes Flavobacterium columnare ATCC 49512   6 6
No Yes Flavobacterium johnsoniae UW101   11 11
No Yes Fibrobacter succinogenes subsp. succinogenes S85   1 1
No Yes Isosphaera pallida ATCC 43644   1 1
No Yes Planctomyces brasiliensis DSM 5305   1 1
No Yes Planctomyces limnophilus DSM 3776   2 2
No Yes Rhodopirellula baltica SH 1   2 2
No Yes Pirellula staleyi DSM 6068   1 1
No Yes Coraliomargarita akajimensis DSM 45221   3 3
No Yes Opitutus terrae PB90-1   8 8
No Yes Akkermansia muciniphila ATCC BAA-835   1 1
No Yes Thermanaerovibrio acidaminovorans DSM 6589   1 1
No Yes Leptospira borgpetersenii serovar Hardjo-bovis str. L550   3 3
No Yes Leptospira interrogans serovar Lai str. IPAV   1 1
No Yes Treponema azotonutricium ZAS-9   1 1
No Yes Treponema primitia ZAS-2   1 1
No Yes Thermodesulfatator indicus DSM 15286   3 3
No Yes Calditerrivibrio nitroreducens DSM 19672   3 3
No Yes Deferribacter desulfuricans SSM1   1 1
No Yes Flexistipes sinusarabici DSM 4947   9 9
No Yes Mesotoga prima MesG1.Ag.4.2   5 5
No Yes Kosmotoga olearia TBF 19.5.1   3 3
No Yes Sulfurihydrogenibium sp. YO3AOP1   2 2
No Yes Candidatus Chloracidobacterium thermophilum B   1 1
No Yes Granulicella tundricola MP5ACTX9   3 3
No Yes Granulicella mallensis MP5ACTX8   2 2
No Yes Candidatus Koribacter versatilis Ellin345   1 1
No Yes Acidobacterium capsulatum ATCC 51196   2 2
No Yes Candidatus Nitrospira defluvii   1 1
No Yes Ilyobacter polytropus DSM 2926   1 1
No Yes candidate division SR1 bacterium RAAC1_SR1_1   1 1
No Yes Candidatus Saccharibacteria bacterium RAAC3_TM7_1   1 1
No Yes Nautilia profundicola AmH   2 2
No Yes Nitratifractor salsuginis DSM 16511   4 4
No Yes Arcobacter nitrofigilis DSM 7299   2 2
No Yes Sulfurovum sp. NBC37-1   1 1
No Yes Desulfobacca acetoxidans DSM 11109   5 5
No Yes Syntrophobacter fumaroxidans MPOB   1 1
No Yes Desulfobulbus propionicus DSM 2032   1 1
No Yes Desulfococcus oleovorans Hxd3   2 2
No Yes Desulfomicrobium baculatum DSM 4028   2 2
No Yes Hippea maritima DSM 10411   5 5
No Yes Geobacter daltonii FRC-32   1 1
No Yes Geobacter sp. M21   3 3
No Yes Geobacter uraniireducens Rf4   8 8
No Yes Geobacter bemidjiensis Bem   5 5
No Yes Geobacter metallireducens GS-15   1 1
No Yes Pelobacter carbinolicus DSM 2380   3 3
No Yes Sorangium cellulosum 'So ce 56'   4 4
No Yes Anaeromyxobacter sp. Fw109-5   8 8
No Yes Pseudogulbenkiania sp. NH8B   1 1
No Yes Leptothrix cholodnii SP-6   1 1
No Yes Thiobacillus denitrificans ATCC 25259   1 1
No Yes Sideroxydans lithotrophicus ES-1   2 2
No Yes Gallionella capsiferriformans ES-2   2 2
No Yes Brevundimonas subvibrioides ATCC 15264   1 1
No Yes Magnetospirillum magneticum AMB-1   1 1
No Yes Rhodospirillum centenum SW   1 1
No Yes Brucella microti CCM 4915   1 1
No Yes Brucella pinnipedialis B2/94   1 1
No Yes Brucella canis ATCC 23365   1 1
No Yes Brucella suis ATCC 23445   1 1
No Yes Brucella melitensis ATCC 23457   1 1
No Yes Brucella ovis ATCC 25840   1 1
No Yes Brucella abortus S19   1 1
No Yes Mesorhizobium opportunistum WSM2075   1 1
No Yes Mesorhizobium ciceri biovar biserrulae WSM1271   1 1
No Yes Rhodomicrobium vannielii ATCC 17100   1 1
No Yes Rhodopseudomonas palustris BisA53   1 1
No Yes Saccharophagus degradans 2-40   1 1
No Yes Teredinibacter turnerae T7901   2 2
No Yes Oceanimonas sp. GK1   1 1
No Yes Aliivibrio salmonicida LFI1238   1 1
No Yes Vibrio fischeri MJ11   2 2
No Yes Vibrio vulnificus MO6-24/O   1 1
No Yes Psychromonas ingrahamii 37   1 1
No Yes Shewanella halifaxensis HAW-EB4   2 2
No Yes Shewanella sediminis HAW-EB3   2 2
No Yes Shewanella denitrificans OS217   1 1
No Yes Shewanella pealeana ATCC 700345   1 1
No Yes Shewanella oneidensis MR-1   1 1
No Yes Shewanella woodyi ATCC 51908   1 1
No Yes Shewanella sp. MR-4   1 1
No Yes Shewanella amazonensis SB2B   2 2
No Yes Shewanella violacea DSS12   1 1
No Yes Shewanella frigidimarina NCIMB 400   2 2
No Yes Shewanella putrefaciens CN-32   1 1
No Yes Pseudoalteromonas sp. SM9913   4 4
No Yes Pseudoalteromonas haloplanktis TAC125   1 1
No Yes Halomonas elongata DSM 2581   1 1
No Yes Methylomicrobium alcaliphilum   1 1
No Yes Pseudoxanthomonas spadix BD-a59   1 1
No Yes Pseudoxanthomonas suwonensis 11-1   1 1
No Yes Xanthomonas axonopodis pv. citri str. 306   1 1
No Yes Xanthomonas oryzae pv. oryzae PXO99A   1 1
No Yes Xanthomonas campestris pv. campestris str. B100   1 1
No Yes Halothiobacillus neapolitanus c2   1 1
No Yes Thioalkalivibrio sulfidophilus HL-EbGr7   4 4
No Yes Nitrosococcus watsonii C-113   1 1
No Yes Legionella pneumophila str. Corby   3 3
No Yes Psychrobacter arcticus 273-4   1 1
No Yes Francisella philomiragia subsp. philomiragia ATCC 25017   1 1
No Yes Chroococcidiopsis thermalis PCC 7203   6 6
No Yes Chamaesiphon minutus PCC 6605   4 4
No Yes Dactylococcopsis salina PCC 8305   1 1
No Yes Crinalium epipsammum PCC 9333   2 2
No Yes Oscillatoria nigro-viridis PCC 7112   3 3
No Yes Cyanothece sp. PCC 7822   1 1
No Yes Cyanothece sp. PCC 7424   5 5
No Yes Cyanothece sp. ATCC 51142   2 2
No Yes Cyanobacterium aponinum PCC 10605   16 16
No Yes Cyanobacterium stanieri PCC 7202   2 2
No Yes Pleurocapsa minor Pleurocapsa sp. PCC 7327   4 4
No Yes Stanieria cyanosphaera PCC 7437   2 2
No Yes Calothrix parietina Calothrix sp. PCC 6303   3 3
No Yes Cylindrospermum stagnale PCC 7417   4 4
No Yes Anabaena cylindrica PCC 7122   5 5
No Yes Chthonomonas calidirosea T49   1 1
No Yes Eubacterium siraeum V10Sc8a   1 1
No Yes Clostridium saccharobutylicum DSM 13864   1 1
No Yes Clostridium saccharoperbutylacetonicum N1-4(HMT)   1 1
No Yes Clostridium kluyveri NBRC 12016   1 1
No Yes Clostridium tetani genome 12124569   1 1
No Yes Clostridium botulinum B1 str. Okra   1 1
No Yes Clostridium botulinum A2 str. Kyoto   1 1
No Yes Clostridium botulinum A str. Hall   1 1
No Yes Clostridium botulinum A str. ATCC 19397   1 1
No Yes Thermoanaerobacterium saccharolyticum JW/SL-YS485   1 1
No Yes Halobacteroides halobius DSM 5150   2 2
No Yes Chlorobium phaeobacteroides BS1   9 9
No Yes Salinibacter ruber DSM 13855   4 4
No Yes Echinicola vietnamensis DSM 17526   4 4
No Yes Emticicia oligotrophica DSM 17448   4 4
No Yes Prevotella dentalis DSM 3688   2 2
No Yes Bacteroides xylanisolvens XB1A   1 1
No Yes Bacteroides fragilis 638R   1 1
No Yes Bacteroides fragilis NCTC 9343   1 1
No Yes Nonlabens dokdonensis DSW-6   7 7
No Yes Psychroflexus torquis ATCC 700755   5 5
No Yes Riemerella anatipestifer RA-CH-2   2 2
No Yes Riemerella anatipestifer RA-CH-1   2 2
No Yes Riemerella anatipestifer RA-GD   2 2
No Yes Riemerella anatipestifer ATCC 11845 = DSM 15868   1 1
No Yes Fibrobacter succinogenes subsp. succinogenes S85   1 1
No Yes Leptospira borgpetersenii serovar Hardjo-bovis str. JB197   3 3
No Yes Leptospira interrogans serovar Lai str. 56601   1 1
No Yes Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130   1 1
No Yes Desulfobacula toluolica Tol2   1 1
No Yes Geobacter sp. M18   3 3
No Yes Sulfuricella denitrificans skB26   2 2
No Yes Rhodobacter sphaeroides ATCC 17025   2 2
No Yes Brucella ceti TE10759-12   1 1
No Yes Brucella ceti TE28753-12   1 1
No Yes Brucella canis HSK A52141   1 1
No Yes Brucella suis VBI22   1 1
No Yes Brucella suis 1330   1 1
No Yes Brucella suis 1330   1 1
No Yes Brucella melitensis NI   1 1
No Yes Brucella melitensis M5-90   1 1
No Yes Brucella melitensis M28   1 1
No Yes Brucella melitensis bv. 1 str. 16M   1 1
No Yes Brucella abortus A13334   1 1
No Yes Brucella melitensis biovar Abortus 2308   1 1
No Yes Brucella abortus bv. 1 str. 9-941   1 1
No Yes Rhizobium etli CFN 42   1 1
No Yes Rhizobium etli bv. mimosae str. Mim1   1 1
No Yes Mesorhizobium australicum WSM2073   2 2
No Yes Rhodopseudomonas palustris BisB18   1 1
No Yes Vibrio fischeri ES114   2 2
No Yes Vibrio vulnificus CMCP6   1 1
No Yes Vibrio vulnificus YJ016   1 1
No Yes Shewanella sp. W3-18-1   1 1
No Yes Shewanella baltica OS678   1 1
No Yes Shewanella baltica OS195   1 1
No Yes Shewanella sp. MR-7   1 1
No Yes Alteromonas macleodii str. 'Balearic Sea AD45'   1 1
No Yes Alcanivorax dieselolei B5   2 2
No Yes Xanthomonas citri subsp. citri Aw12879   1 1
No Yes Xanthomonas campestris pv. vesicatoria str. 85-10   1 1
No Yes Xanthomonas axonopodis pv. citrumelo F1   1 1
No Yes Xanthomonas axonopodis Xac29-1   1 1
No Yes Xanthomonas oryzae pv. oryzicola BLS256   1 1
No Yes Xanthomonas oryzae pv. oryzae MAFF 311018   1 1
No Yes Xanthomonas oryzae pv. oryzae KACC 10331   1 1
No Yes Xanthomonas campestris pv. raphani 756C   1 1
No Yes Xanthomonas campestris pv. campestris str. 8004   1 1
No Yes Xanthomonas campestris pv. campestris str. ATCC 33913   1 1
No Yes Coxiella burnetii RSA 331   1 1
No Yes Coxiella burnetii RSA 493   1 1
No Yes Legionella pneumophila 2300/99 Alcoy   2 2
No Yes Pseudomonas syringae pv. syringae B728a   1 1
No Yes Pseudomonas stutzeri DSM 10701   1 1
No Yes Francisella cf. novicida Fx1   1 1
No Yes 1_050719N (meta-genome)   3 3
No Yes 2_050719S (meta-genome)   11 11
No Yes 3_050719R (meta-genome)   1 1
No Yes 4_050719Q (meta-genome)   16 16
No Yes 4_Deep_abyss (meta-genome)   1 1
No Yes 5_050719P (meta-genome)   19 19
No Yes Activated sludge plasmid pool Morges-2009 (Newbler) (meta-genome)   5 5
No Yes Air microbial communities Singapore indoor air filters 1 (meta-genome)   3 3
No Yes Air microbial communities Singapore indoor air filters 2 (meta-genome)   5 5
No Yes Anaerobic methane oxidation (AOM) community from Eel River Basin sediment, California (meta-genome)   4 4
No Yes Bath Hot Springs, planktonic community (meta-genome)   1 1
No Yes Combined (meta-genome)   6 6
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   5 5
No Yes Dump bottom (Dump bottom) (meta-genome)   29 29
No Yes Dump top (Dump top) (meta-genome)   13 13
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #1 (meta-genome)   10 10
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome)   7 7
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #3 (meta-genome)   9 9
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   30 30
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   3 3
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   1 1
No Yes Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes   11 11
No Yes Guerrero Negro salt ponds hypersaline mat 01(G) (meta-genome)   9 9
No Yes Guerrero Negro salt ponds hypersaline mat 02(H) (meta-genome)   9 9
No Yes Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome)   5 5
No Yes Guerrero Negro salt ponds hypersaline mat 04(N) (meta-genome)   5 5
No Yes Guerrero Negro salt ponds hypersaline mat 05(O) (meta-genome)   7 7
No Yes Guerrero Negro salt ponds hypersaline mat 06(P) (meta-genome)   2 2
No Yes Guerrero Negro salt ponds hypersaline mat 07(S) (meta-genome)   7 7
No Yes Guerrero Negro salt ponds hypersaline mat 08(T) (meta-genome)   4 4
No Yes Guerrero Negro salt ponds hypersaline mat 09(Y) (meta-genome)   6 6
No Yes Guerrero Negro salt ponds hypersaline mat 10(Z) (meta-genome)   3 3
No Yes Hindgut microbiome of Nasutitermes sp. (Costa Rica) (meta-genome)   13 13
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP11 from Octopus Springs (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP12 from Calcite Springs, Tower Falls Region (meta-genome)   10 10
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   21 21
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome)   16 16
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime (meta-genome)   11 11
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome)   15 15
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome)   36 36
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome)   24 24
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   14 14
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome)   15 15
No Yes Human Gut Community Subject 7 (meta-genome)   3 3
No Yes Human Gut Community Subject 8 (meta-genome)   4 4
No Yes Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)   10 10
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   24 24
No Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome)   18 18
No Yes Marine anammox bioreactor enriched for Scalindua species (meta-genome)   27 27
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   84 83
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   34 34
No Yes Methylotrophic community from Lake Washington sediment Formate enrichment (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   27 26
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   19 19
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)   4 4
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   30 30
No Yes Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome)   16 16
No Yes Mouse Gut Community lean2 (meta-genome)   1 1
No Yes Mouse Gut Community lean3 (meta-genome)   1 1
No Yes NCBI 2017_08 genome   11021 11006
No Yes Nymph Lake Bulk Water (meta-genome)   1 1
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   59 59
No Yes Olavius algarvensis endosymbiont metagenome Delta1 (meta-genome)   27 27
No Yes Olavius algarvensis endosymbiont metagenome Delta4 (meta-genome)   1 1
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   15 15
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   7 7
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   6 6
No Yes Sludge/Australian, Phrap Assembly (meta-genome)   6 6
No Yes Sludge/US, Jazz Assembly (meta-genome)   2 2
No Yes Sludge/US, Phrap Assembly (meta-genome)   2 2
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   51 51
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   80 80
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   23 23
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   8 8
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   23 23
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   41 41
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   62 62
No Yes Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)   6 6
No Yes STRING v9.0.5 (STRING)   291 291
No Yes Switchgrass field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing switchgr (meta-genome)   10 10
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   41 41
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome)   12 12
No Yes Termite Protist Endosymbiont Community (meta-genome)   2 2
No Yes Uniprot 2018_03 genome   14821 14812
No Yes Uranium Contaminated Groundwater FW106 (meta-genome)   2 2
No Yes Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)   22 22
No Yes Global Ocean Sampling Expedition (GOS)   175 174
No Yes NCBI plasmid sequences (Plasmids)   23 23
No Yes NCBI viral sequences (Viral)   1 1
No Yes PDB chains (SCOP 1.75) (PDB)   2 2
No Yes Protein Data Bank (all PDB sequenc)   10 10
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   30 30
No Yes TargetDB (Targets)   17 17
No Yes UniProt viral sequences (Viral)   1 1

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