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DnaD domain-like superfamily domain assignments
in
Bacillus weihenstephanensis KBAB4

Assignment details

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Bacillus weihenstephanensis KBAB4 has 4 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|163938834|ref|YP_001643718.1|   0.00000000000000183   169-230   DnaD domain  
gi|163939462|ref|YP_001644346.1|   1.83e-19   130-195   DnaD domain  
gi|163940928|ref|YP_001645812.1|   0.000000000000122   171-229   DnaD domain  
gi|163941527|ref|YP_001646411.1|   3.01e-17   189-250   DnaD domain  

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Select to display   Genome       Domains   Proteins
No Yes ALL   67355 67355
No Yes Aspergillus zonatus v1.0   2 2
No Yes Physcomitrella patens   1 1
No Yes Microcystis aeruginosa NIES-843   1 1
No Yes Candidatus Phytoplasma mali   1 1
No Yes Aster yellows witches'-broom phytoplasma AYWB   1 1
No Yes Onion yellows phytoplasma OY-M   1 1
No Yes Rubrobacter xylanophilus DSM 9941   1 1
No Yes Caldilinea aerophila DSM 14535 = NBRC 104270   1 1
No Yes Dehalococcoides ethenogenes 195   1 1
No Yes Dehalococcoides sp. BAV1   1 1
No Yes Dehalogenimonas lykanthroporepellens BL-DC-9   1 1
No Yes Anaerolinea thermophila UNI-1   1 1
No Yes Thermomicrobium roseum DSM 5159   1 1
No Yes Sphaerobacter thermophilus DSM 20745   1 1
No Yes Herpetosiphon aurantiacus DSM 785   1 1
No Yes Roseiflexus sp. RS-1   1 1
No Yes Roseiflexus castenholzii DSM 13941   1 1
No Yes Chloroflexus sp. MS-G   1 1
No Yes Chloroflexus sp. Y-400-fl   1 1
No Yes Chloroflexus aggregans DSM 9485   1 1
No Yes Chloroflexus aurantiacus J-10-fl   1 1
No Yes Anaerococcus prevotii DSM 20548   1 1
No Yes Finegoldia magna ATCC 29328   1 1
No Yes Acidaminococcus intestini RyC-MR95   1 1
No Yes Selenomonas sputigena ATCC 35185   1 1
No Yes Erysipelothrix rhusiopathiae str. Fujisawa   1 1
No Yes Symbiobacterium thermophilum IAM 14863   2 1
No Yes Clostridiales genomosp. BVAB3 str. UPII9-5   1 1
No Yes Clostridium clariflavum DSM 19732   2 1
No Yes Eubacterium siraeum   2 1
No Yes Clostridium cellulolyticum H10   2 1
No Yes Clostridium thermocellum ATCC 27405   2 1
No Yes Ethanoligenens harbinense YUAN-3   2 1
No Yes Ruminococcus sp.   2 1
No Yes Ruminococcus bromii   2 1
No Yes Ruminococcus albus 7   2 1
No Yes Oscillibacter valericigenes Sjm18-20   1 1
No Yes Candidatus Desulforudis audaxviator MP104C   1 1
No Yes Thermincola potens JR   1 1
No Yes Pelotomaculum thermopropionicum SI   1 1
No Yes Desulfosporosinus acidiphilus SJ4   3 3
No Yes Desulfosporosinus orientis DSM 765   1 1
No Yes Dehalobacter sp. DCA   1 1
No Yes Dehalobacter sp. CF   1 1
No Yes Syntrophobotulus glycolicus DSM 8271   1 1
No Yes Desulfitobacterium hafniense Y51   2 2
No Yes Desulfitobacterium dehalogenans ATCC 51507   1 1
No Yes Desulfotomaculum reducens MI-1   1 1
No Yes Desulfotomaculum acetoxidans DSM 771   1 1
No Yes Desulfotomaculum kuznetsovii DSM 6115   2 2
No Yes Desulfotomaculum carboxydivorans CO-1-SRB   1 1
No Yes Desulfotomaculum ruminis DSM 2154   1 1
No Yes Acetobacterium woodii DSM 1030   1 1
No Yes Eubacterium eligens ATCC 27750   2 1
No Yes Eubacterium limosum KIST612   2 1
No Yes Clostridium difficile 630   3 2
No Yes Clostridium sticklandii DSM 519   2 1
No Yes Filifactor alocis ATCC 35896   1 1
No Yes Clostridium saccharolyticum WM1   2 1
No Yes Clostridium phytofermentans ISDg   2 1
No Yes Clostridium lentocellum DSM 5427   3 2
No Yes [Ruminococcus] obeum   2 1
No Yes [Ruminococcus] torques   2 1
No Yes Eubacterium rectale M104/1   2 1
No Yes Eubacterium rectale ATCC 33656   2 1
No Yes Coprococcus sp. ART55/1   2 1
No Yes Roseburia hominis A2-183   2 1
No Yes Roseburia intestinalis   2 1
No Yes Butyrivibrio proteoclasticus B316   2 1
No Yes Butyrivibrio fibrisolvens   2 1
No Yes Syntrophothermus lipocalidus DSM 12680   1 1
No Yes Syntrophomonas wolfei subsp. wolfei str. Goettingen   1 1
No Yes Heliobacterium modesticaldum Ice1   1 1
No Yes Alkaliphilus oremlandii OhILAs   2 1
No Yes Alkaliphilus metalliredigens QYMF   3 2
No Yes Candidatus Arthromitus sp. SFB-mouse-Japan   2 1
No Yes Clostridium sp. BNL1100   2 1
No Yes Clostridium novyi NT   2 1
No Yes Clostridium ljungdahlii DSM 13528   5 4
No Yes Clostridium kluyveri DSM 555   5 4
No Yes Clostridium beijerinckii NCIMB 8052   6 5
No Yes Clostridium tetani E88   4 3
No Yes Clostridium perfringens ATCC 13124   2 1
No Yes Clostridium cellulovorans 743B   2 1
No Yes Clostridium botulinum A str. ATCC 3502   3 2
No Yes Clostridium acetobutylicum ATCC 824   2 1
No Yes Mahella australiensis 50-1 BON   3 2
No Yes Caldicellulosiruptor obsidiansis OB47   2 1
No Yes Caldicellulosiruptor kronotskyensis 2002   2 1
No Yes Caldicellulosiruptor hydrothermalis 108   2 1
No Yes Caldicellulosiruptor owensensis OL   2 1
No Yes Caldicellulosiruptor lactoaceticus 6A   2 1
No Yes Caldicellulosiruptor kristjanssonii 177R1B   2 1
No Yes Caldicellulosiruptor saccharolyticus DSM 8903   2 1
No Yes Caldicellulosiruptor bescii DSM 6725   2 1
No Yes Thermoanaerobacterium xylanolyticum LX-11   2 1
No Yes Thermoanaerobacterium thermosaccharolyticum DSM 571   2 1
No Yes Thermoanaerobacter tengcongensis MB4   2 1
No Yes Carboxydothermus hydrogenoformans Z-2901   1 1
No Yes Moorella thermoacetica ATCC 39073   1 1
No Yes Ammonifex degensii KC4   2 2
No Yes Thermoanaerobacter mathranii subsp. mathranii str. A3   2 1
No Yes Thermoanaerobacter pseudethanolicus ATCC 33223   2 1
No Yes Thermoanaerobacter sp. X514   2 1
No Yes Thermoanaerobacter italicus Ab9   3 2
No Yes Thermoanaerobacter wiegelii Rt8.B1   2 1
No Yes Thermoanaerobacter brockii subsp. finnii Ako-1   2 1
No Yes Carnobacterium sp. 17-4   1 1
No Yes Carnobacterium sp. WN1359   1 1
No Yes Aerococcus urinae ACS-120-V-Col10a   1 1
No Yes Tetragenococcus halophilus NBRC 12172   2 2
No Yes Melissococcus plutonius DAT561   1 1
No Yes Enterococcus sp. 7L76   2 2
No Yes Enterococcus hirae ATCC 9790   2 2
No Yes Enterococcus faecium Aus0004   1 1
No Yes Enterococcus faecalis 62   4 4
No Yes Weissella koreensis KACC 15510   1 1
No Yes Oenococcus oeni PSU-1   1 1
No Yes Leuconostoc sp. C2   1 1
No Yes Leuconostoc kimchii IMSNU 11154   1 1
No Yes Leuconostoc citreum KM20   1 1
No Yes Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293   2 2
No Yes Leuconostoc gasicomitatum LMG 18811   1 1
No Yes Lactobacillus casei ATCC 334   2 2
No Yes Lactobacillus kefiranofaciens ZW3   1 1
No Yes Lactobacillus crispatus ST1   1 1
No Yes Lactobacillus rhamnosus Lc 705   2 2
No Yes Lactobacillus johnsonii FI9785   1 1
No Yes Lactobacillus sanfranciscensis TMW 1.1304   1 1
No Yes Lactobacillus salivarius CECT 5713   1 1
No Yes Lactobacillus ruminis ATCC 27782   2 2
No Yes Lactobacillus fermentum IFO 3956   1 1
No Yes Lactobacillus amylovorus GRL1118   1 1
No Yes Lactobacillus sakei subsp. sakei 23K   1 1
No Yes Lactobacillus reuteri DSM 20016   1 1
No Yes Lactobacillus gasseri ATCC 33323   1 1
No Yes Lactobacillus plantarum JDM1   1 1
No Yes Lactobacillus helveticus DPC 4571   1 1
No Yes Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365   1 1
No Yes Lactobacillus buchneri NRRL B-30929   2 2
No Yes Lactobacillus buchneri   1 1
No Yes Lactobacillus brevis ATCC 367   1 1
No Yes Lactobacillus acidophilus 30SC   1 1
No Yes Pediococcus claussenii ATCC BAA-344   1 1
No Yes Pediococcus pentosaceus ATCC 25745   1 1
No Yes Lactococcus garvieae ATCC 49156   1 1
No Yes Lactococcus lactis subsp. cremoris MG1363   1 1
No Yes Streptococcus sp. I-P16   1 1
No Yes Streptococcus sp. I-G2   1 1
No Yes Streptococcus intermedius JTH08   2 2
No Yes Streptococcus gallolyticus UCN34   1 1
No Yes Streptococcus pseudopneumoniae IS7493   3 3
No Yes Streptococcus pasteurianus ATCC 43144   1 1
No Yes Streptococcus equi subsp. equi 4047   3 3
No Yes Streptococcus dysgalactiae subsp. equisimilis GGS_124   3 3
No Yes Streptococcus infantarius subsp. infantarius CJ18   2 2
No Yes Streptococcus macedonicus ACA-DC 198   1 1
No Yes Streptococcus mitis B6   1 1
No Yes Streptococcus uberis 0140J   2 2
No Yes Streptococcus parauberis KCTC 11537   4 4
No Yes Streptococcus parasanguinis ATCC 15912   1 1
No Yes Streptococcus pyogenes str. Manfredo   4 4
No Yes Streptococcus pneumoniae P1031   2 2
No Yes Streptococcus agalactiae A909   1 1
No Yes Streptococcus mutans NN2025   1 1
No Yes Streptococcus thermophilus LMD-9   1 1
No Yes Streptococcus suis P1/7   1 1
No Yes Streptococcus sanguinis SK36   1 1
No Yes Streptococcus salivarius 57.I   1 1
No Yes Streptococcus oralis Uo5   1 1
No Yes Streptococcus gordonii str. Challis substr. CH1   1 1
No Yes Exiguobacterium sp. MH3   3 3
No Yes Exiguobacterium sp. AT1b   1 1
No Yes Exiguobacterium sibiricum 255-15   2 2
No Yes Kyrpidia tusciae DSM 2912   1 1
No Yes Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446   1 1
No Yes Brevibacillus brevis NBRC 100599   1 1
No Yes Paenibacillus sp. JDR-2   1 1
No Yes Paenibacillus terrae HPL-003   1 1
No Yes Paenibacillus mucilaginosus 3016   3 3
No Yes Paenibacillus polymyxa M1   3 3
No Yes Bacillus selenitireducens MLS10   1 1
No Yes Listeria welshimeri serovar 6b str. SLCC5334   1 1
No Yes Listeria innocua Clip11262   5 5
No Yes Listeria seeligeri serovar 1/2b str. SLCC3954   1 1
No Yes Listeria monocytogenes serotype 4b str. CLIP 80459   1 1
No Yes Listeria ivanovii subsp. ivanovii PAM 55   1 1
No Yes Solibacillus silvestris StLB046   1 1
No Yes Geobacillus thermoglucosidasius C56-YS93   2 2
No Yes Lysinibacillus sphaericus C3-41   3 3
No Yes Oceanobacillus iheyensis HTE831   1 1
No Yes Anoxybacillus flavithermus WK1   2 2
No Yes Geobacillus thermoleovorans CCB_US3_UF5   2 2
No Yes Geobacillus kaustophilus HTA426   3 3
No Yes Geobacillus sp. GHH01   2 2
No Yes Geobacillus sp. WCH70   1 1
No Yes Geobacillus thermodenitrificans NG80-2   2 2
No Yes Halobacillus halophilus DSM 2266   6 6
No Yes Bacillus sp. JS   1 1
No Yes Bacillus sp. 1NLA3E   2 2
No Yes Bacillus amyloliquefaciens FZB42   1 1
No Yes Bacillus atrophaeus 1942   1 1
No Yes Bacillus subtilis subsp. subtilis str. 168   2 2
No Yes Bacillus licheniformis DSM 13 = ATCC 14580   2 2
No Yes Bacillus halodurans C-125   2 2
No Yes Bacillus weihenstephanensis KBAB4   4 4
No Yes Bacillus thuringiensis str. Al Hakam   3 3
No Yes Bacillus cereus 03BB102   4 4
No Yes Bacillus anthracis str. A0248   5 5
No Yes Bacillus pseudofirmus OF4   2 2
No Yes Bacillus clausii KSM-K16   1 1
No Yes Bacillus cellulosilyticus DSM 2522   1 1
No Yes Bacillus pumilus SAFR-032   1 1
No Yes Bacillus megaterium DSM 319   2 2
No Yes Bacillus coagulans 2-6   1 1
No Yes Macrococcus caseolyticus JCSC5402   4 4
No Yes Staphylococcus pseudintermedius HKU10-03   2 2
No Yes Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305   1 1
No Yes Staphylococcus lugdunensis HKU09-01   2 2
No Yes Staphylococcus haemolyticus JCSC1435   1 1
No Yes Staphylococcus epidermidis RP62A   1 1
No Yes Staphylococcus carnosus subsp. carnosus TM300   1 1
No Yes Staphylococcus aureus subsp. aureus JH1   3 3
No Yes Staphylococcus aureus   2 2
No Yes Batrachochytrium dendrobatidis JAM81   2 2
No Yes Candidatus Phytoplasma solani tobfin_28409   1 1
No Yes Candidatus Phytoplasma australiense Strawberry lethal yellows phytoplasma (CPA) str. NZSb11   1 1
No Yes Candidatus Phytoplasma australiense   1 1
No Yes Dehalococcoides mccartyi GY50   1 1
No Yes Dehalococcoides mccartyi DCMB5   1 1
No Yes Dehalococcoides mccartyi BTF08   2 2
No Yes Dehalococcoides sp. GT   1 1
No Yes Dehalococcoides sp. VS   1 1
No Yes Dehalococcoides sp. CBDB1   1 1
No Yes [Eubacterium] cylindroides [Eubacterium] cylindroides T2-87   2 2
No Yes Erysipelothrix rhusiopathiae SY1027   1 1
No Yes Eubacterium siraeum V10Sc8a   2 1
No Yes Clostridium thermocellum DSM 1313   2 1
No Yes [Clostridium] stercorarium Clostridiu subsp. stercorarium DSM 8532   2 1
No Yes Faecalibacterium prausnitzii L2-6   1 1
No Yes Ruminococcus champanellensis 18P13   2 1
No Yes Clostridium acidurici 9a   4 3
No Yes Desulfosporosinus meridiei DSM 13257   2 2
No Yes Desulfitobacterium dichloroeliminans LMG P-21439   1 1
No Yes Desulfitobacterium hafniense DCB-2   1 1
No Yes Desulfotomaculum gibsoniae DSM 7213   1 1
No Yes Clostridium difficile BI1   2 1
No Yes Clostridium difficile R20291   2 1
No Yes Clostridium difficile CD196   2 1
No Yes Coprococcus catus GD/7   2 1
No Yes Roseburia intestinalis XB6B4   2 1
No Yes Candidatus Arthromitus sp. SFB-rat-Yit   2 1
No Yes Candidatus Arthromitus sp. SFB-mouse-Yit   2 1
No Yes Clostridium sp. SY8519   2 1
No Yes Clostridium saccharobutylicum DSM 13864   3 2
No Yes Clostridium autoethanogenum DSM 10061   4 3
No Yes Clostridium saccharoperbutylacetonicum N1-4(HMT)   5 4
No Yes Clostridium kluyveri NBRC 12016   4 3
No Yes Clostridium tetani genome 12124569   3 2
No Yes Clostridium perfringens SM101   2 1
No Yes Clostridium perfringens str. 13   2 1
No Yes Clostridium pasteurianum BC1   2 1
No Yes Clostridium botulinum H04402 065   3 2
No Yes Clostridium botulinum BKT015925   5 4
No Yes Clostridium botulinum F str. 230613   3 2
No Yes Clostridium botulinum F str. Langeland   3 2
No Yes Clostridium botulinum E3 str. Alaska E43   3 2
No Yes Clostridium botulinum B1 str. Okra   3 2
No Yes Clostridium botulinum Ba4 str. 657   5 4
No Yes Clostridium botulinum A2 str. Kyoto   3 2
No Yes Clostridium botulinum A3 str. Loch Maree   4 3
No Yes Clostridium botulinum A str. Hall   4 3
No Yes Clostridium botulinum A str. ATCC 19397   4 3
No Yes Clostridium acetobutylicum DSM 1731   2 1
No Yes Clostridium acetobutylicum EA 2018   2 1
No Yes Thermoanaerobacterium saccharolyticum JW/SL-YS485   2 1
No Yes Thermoanaerobacterium thermosaccharolyticum M0795   2 1
No Yes Thermacetogenium phaeum DSM 12270   1 1
No Yes Thermoanaerobacter sp. X513   2 1
No Yes Carnobacterium maltaromaticum LMA28   3 3
No Yes Melissococcus plutonius ATCC 35311   1 1
No Yes Enterococcus mundtii QU 25   2 2
No Yes Enterococcus casseliflavus EC20   1 1
No Yes Enterococcus faecium Aus0085   1 1
No Yes Enterococcus faecium NRRL B-2354   2 2
No Yes Enterococcus faecium DO   1 1
No Yes Enterococcus faecalis str. Symbioflor 1   3 3
No Yes Enterococcus faecalis D32   4 4
No Yes Enterococcus faecalis OG1RF   2 2
No Yes Enterococcus faecalis V583   5 5
No Yes Leuconostoc carnosum JB16   1 1
No Yes Leuconostoc mesenteroides subsp. mesenteroides J18   1 1
No Yes Leuconostoc gelidum JB7   1 1
No Yes Lactobacillus paracasei subsp. paracasei 8700:2   3 3
No Yes Lactobacillus casei LOCK919   5 5
No Yes Lactobacillus casei W56   4 4
No Yes Lactobacillus casei LC2W   3 3
No Yes Lactobacillus casei BD-II   4 4
No Yes Lactobacillus casei BL23   4 4
No Yes Lactobacillus casei str. Zhang   1 1
No Yes Lactobacillus rhamnosus LOCK908   1 1
No Yes Lactobacillus rhamnosus LOCK900   2 2
No Yes Lactobacillus rhamnosus ATCC 8530   1 1
No Yes Lactobacillus rhamnosus GG   2 2
No Yes Lactobacillus rhamnosus GG   2 2
No Yes Lactobacillus johnsonii N6.2   1 1
No Yes Lactobacillus johnsonii DPC 6026   1 1
No Yes Lactobacillus johnsonii NCC 533   1 1
No Yes Lactobacillus salivarius UCC118   1 1
No Yes Lactobacillus fermentum F-6   1 1
No Yes Lactobacillus fermentum CECT 5716   1 1
No Yes Lactobacillus amylovorus GRL 1112   1 1
No Yes Lactobacillus reuteri TD1   3 2
No Yes Lactobacillus reuteri I5007   1 1
No Yes Lactobacillus reuteri JCM 1112   1 1
No Yes Lactobacillus reuteri SD2112   1 1
No Yes Lactobacillus plantarum 16   2 2
No Yes Lactobacillus plantarum ZJ316   2 2
No Yes Lactobacillus plantarum subsp. plantarum ST-III   2 2
No Yes Lactobacillus plantarum subsp. plantarum P-8   2 2
No Yes Lactobacillus plantarum WCFS1   3 3
No Yes Lactobacillus helveticus R0052   1 1
No Yes Lactobacillus helveticus H10   1 1
No Yes Lactobacillus helveticus CNRZ32   1 1
No Yes Lactobacillus delbrueckii subsp. bulgaricus ND02   1 1
No Yes Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842   1 1
No Yes Lactobacillus delbrueckii subsp. bulgaricus 2038   1 1
No Yes Lactobacillus brevis KB290   1 1
No Yes Lactobacillus acidophilus La-14   1 1
No Yes Lactobacillus acidophilus NCFM   1 1
No Yes Pediococcus pentosaceus SL4   1 1
No Yes Lactococcus garvieae Lg2   1 1
No Yes Lactococcus lactis subsp. lactis KLDS 4.0325   3 3
No Yes Lactococcus lactis subsp. lactis IO-1   2 2
No Yes Lactococcus lactis subsp. lactis CV56   2 2
No Yes Lactococcus lactis subsp. lactis KF147   2 2
No Yes Lactococcus lactis subsp. lactis Il1403   1 1
No Yes Lactococcus lactis subsp. cremoris KW2   1 1
No Yes Lactococcus lactis subsp. cremoris UC509.9   1 1
No Yes Lactococcus lactis subsp. cremoris A76   1 1
No Yes Lactococcus lactis subsp. cremoris NZ9000   1 1
No Yes Lactococcus lactis subsp. cremoris SK11   2 2
No Yes Streptococcus constellatus subsp. pharyngis C1050   2 2
No Yes Streptococcus constellatus subsp. pharyngis C818   2 2
No Yes Streptococcus constellatus subsp. pharyngis C232   2 2
No Yes Streptococcus intermedius B196   1 1
No Yes Streptococcus intermedius C270   1 1
No Yes Streptococcus anginosus C238   2 2
No Yes Streptococcus anginosus C1051   1 1
No Yes Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069   1 1
No Yes Streptococcus gallolyticus subsp. gallolyticus ATCC 43143   1 1
No Yes Streptococcus lutetiensis 033   3 3
No Yes Streptococcus equi subsp. zooepidemicus ATCC 35246   1 1
No Yes Streptococcus equi subsp. zooepidemicus MGCS10565   1 1
No Yes Streptococcus equi subsp. zooepidemicus   1 1
No Yes Streptococcus dysgalactiae subsp. equisimilis 167   2 2
No Yes Streptococcus dysgalactiae subsp. equisimilis AC-2713   1 1
No Yes Streptococcus dysgalactiae subsp. equisimilis ATCC 12394   1 1
No Yes Streptococcus dysgalactiae subsp. equisimilis RE378   1 1
No Yes Streptococcus oligofermentans AS 1.3089   2 2
No Yes Streptococcus iniae SF1   1 1
No Yes Streptococcus parasanguinis FW213   1 1
No Yes Streptococcus pyogenes HSC5   3 3
No Yes Streptococcus pyogenes A20   3 3
No Yes Streptococcus pyogenes MGAS1882   1 1
No Yes Streptococcus pyogenes MGAS15252   1 1
No Yes Streptococcus pyogenes Alab49   3 3
No Yes Streptococcus pyogenes MGAS10750   2 2
No Yes Streptococcus pyogenes MGAS10270   2 2
No Yes Streptococcus pyogenes MGAS2096   1 1
No Yes Streptococcus pyogenes MGAS9429   2 2
No Yes Streptococcus pyogenes MGAS6180   2 2
No Yes Streptococcus pyogenes NZ131   1 1
No Yes Streptococcus pyogenes MGAS8232   3 3
No Yes Streptococcus pyogenes MGAS10394   2 2
No Yes Streptococcus pyogenes MGAS315   3 3
No Yes Streptococcus pyogenes SSI-1   3 3
No Yes Streptococcus pyogenes M1 476   3 3
No Yes Streptococcus pyogenes MGAS5005   3 3
No Yes Streptococcus pyogenes M1 GAS   3 3
No Yes Streptococcus pneumoniae A026   1 1
No Yes Streptococcus pneumoniae ST556   1 1
No Yes Streptococcus pneumoniae SPNA45   2 2
No Yes Streptococcus pneumoniae SPN994039   2 2
No Yes Streptococcus pneumoniae SPN994038   2 2
No Yes Streptococcus pneumoniae SPN034183   2 2
No Yes Streptococcus pneumoniae SPN034156   2 2
No Yes Streptococcus pneumoniae INV104   2 2
No Yes Streptococcus pneumoniae INV200   1 1
No Yes Streptococcus pneumoniae OXC141   2 2
No Yes Streptococcus pneumoniae gamPNI0373   2 2
No Yes Streptococcus pneumoniae AP200   2 2
No Yes Streptococcus pneumoniae ATCC 700669   1 1
No Yes Streptococcus pneumoniae TCH8431/19A   1 1
No Yes Streptococcus pneumoniae CGSP14   1 1
No Yes Streptococcus pneumoniae G54   1 1
No Yes Streptococcus pneumoniae JJA   1 1
No Yes Streptococcus pneumoniae 70585   2 2
No Yes Streptococcus pneumoniae Hungary19A-6   2 2
No Yes Streptococcus pneumoniae Taiwan19F-14   1 1
No Yes Streptococcus pneumoniae D39   1 1
No Yes Streptococcus pneumoniae 670-6B   2 2
No Yes Streptococcus pneumoniae R6   1 1
No Yes Streptococcus pneumoniae TIGR4   2 2
No Yes Streptococcus agalactiae ILRI112   1 1
No Yes Streptococcus agalactiae ILRI005   2 2
No Yes Streptococcus agalactiae 09mas018883   1 1
No Yes Streptococcus agalactiae 2-22   1 1
No Yes Streptococcus agalactiae SA20-06   1 1
No Yes Streptococcus agalactiae GD201008-001   1 1
No Yes Streptococcus agalactiae NEM316   1 1
No Yes Streptococcus agalactiae 2603V/R   2 2
No Yes Streptococcus mutans GS-5   1 1
No Yes Streptococcus mutans LJ23   1 1
No Yes Streptococcus mutans UA159   1 1
No Yes Streptococcus thermophilus MN-ZLW-002   1 1
No Yes Streptococcus thermophilus JIM 8232   1 1
No Yes Streptococcus thermophilus ND03   1 1
No Yes Streptococcus thermophilus CNRZ1066   1 1
No Yes Streptococcus thermophilus LMG 18311   1 1
No Yes Streptococcus suis T15   2 2
No Yes Streptococcus suis TL13   2 2
No Yes Streptococcus suis SC070731   1 1
No Yes Streptococcus suis S735   1 1
No Yes Streptococcus suis ST3   2 2
No Yes Streptococcus suis D9   2 2
No Yes Streptococcus suis SS12   1 1
No Yes Streptococcus suis D12   3 3
No Yes Streptococcus suis ST1   1 1
No Yes Streptococcus suis A7   1 1
No Yes Streptococcus suis JS14   1 1
No Yes Streptococcus suis BM407   1 1
No Yes Streptococcus suis SC84   1 1
No Yes Streptococcus suis GZ1   1 1
No Yes Streptococcus suis 98HAH33   1 1
No Yes Streptococcus suis 05ZYH33   1 1
No Yes Streptococcus salivarius CCHSS3   1 1
No Yes Streptococcus salivarius JIM8777   2 2
No Yes Exiguobacterium antarcticum B7   1 1
No Yes Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1   1 1
No Yes Thermobacillus composti KWC4   1 1
No Yes Paenibacillus sp. Y412MC10   1 1
No Yes Paenibacillus mucilaginosus KNP414   1 1
No Yes Paenibacillus mucilaginosus K02   2 2
No Yes Paenibacillus larvae subsp. larvae DSM 25430   1 1
No Yes Paenibacillus polymyxa CR1   2 2
No Yes Paenibacillus polymyxa SC2   2 2
No Yes Paenibacillus polymyxa E681   1 1
No Yes Listeria monocytogenes EGD sequence   1 1
No Yes Listeria monocytogenes N53-1   1 1
No Yes Listeria monocytogenes La111   1 1
No Yes Listeria monocytogenes serotype 4b str. LL195   1 1
No Yes Listeria monocytogenes 07PF0776   1 1
No Yes Listeria monocytogenes M7   2 2
No Yes Listeria monocytogenes J1-220   2 2
No Yes Listeria monocytogenes J1816   1 1
No Yes Listeria monocytogenes SLCC2376   1 1
No Yes Listeria monocytogenes SLCC5850   1 1
No Yes Listeria monocytogenes ATCC 19117   1 1
No Yes Listeria monocytogenes L312   1 1
No Yes Listeria monocytogenes SLCC2479   2 2
No Yes Listeria monocytogenes SLCC7179   1 1
No Yes Listeria monocytogenes SLCC2540   1 1
No Yes Listeria monocytogenes SLCC2378   1 1
No Yes Listeria monocytogenes serotype 1/2b str. SLCC2755   1 1
No Yes Listeria monocytogenes serotype 1/2c str. SLCC2372   2 2
No Yes Listeria monocytogenes serotype 7 str. SLCC2482   1 1
No Yes Listeria monocytogenes 08-5578   2 2
No Yes Listeria monocytogenes 08-5923   2 2
No Yes Listeria monocytogenes L99   2 2
No Yes Listeria monocytogenes HCC23   2 2
No Yes Listeria monocytogenes 10403S   2 2
No Yes Listeria monocytogenes J0161   2 2
No Yes Listeria monocytogenes Finland 1998   1 1
No Yes Listeria monocytogenes FSL R2-561   2 2
No Yes Listeria monocytogenes serotype 4b str. F2365   1 1
No Yes Listeria monocytogenes EGD-e   2 2
No Yes Geobacillus sp. C56-T3   2 2
No Yes Geobacillus sp. Y4.1MC1   2 2
No Yes Geobacillus sp. Y412MC52   2 2
No Yes Geobacillus sp. Y412MC61   2 2
No Yes Amphibacillus xylanus NBRC 15112   2 2
No Yes Bacillus amyloliquefaciens subsp. plantarum sequencing   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum UCMB5033   3 3
No Yes Bacillus amyloliquefaciens subsp. plantarum AS43.3   2 2
No Yes Bacillus amyloliquefaciens subsp. plantarum YAU B9601-Y2   2 2
No Yes Bacillus amyloliquefaciens subsp. plantarum UCMB5113   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum UCMB5036   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum CAU B946   2 2
No Yes Bacillus amyloliquefaciens LFB112   1 1
No Yes Bacillus amyloliquefaciens CC178   1 1
No Yes Bacillus amyloliquefaciens Y2   2 2
No Yes Bacillus amyloliquefaciens IT-45   2 2
No Yes Bacillus amyloliquefaciens XH7   2 2
No Yes Bacillus amyloliquefaciens LL3   2 2
No Yes Bacillus amyloliquefaciens TA208   2 2
No Yes Bacillus amyloliquefaciens DSM 7   2 2
No Yes Bacillus licheniformis 9945A   1 1
No Yes Bacillus subtilis PY79   2 2
No Yes Bacillus subtilis XF-1   2 2
No Yes Bacillus subtilis QB928   1 1
No Yes Bacillus subtilis BSn5   3 3
No Yes Bacillus subtilis subsp. subtilis str. BAB-1   1 1
No Yes Bacillus subtilis subsp. subtilis str. BSP1   1 1
No Yes Bacillus subtilis subsp. subtilis str. RO-NN-1   1 1
No Yes Bacillus subtilis subsp. subtilis 6051-HGW   2 2
No Yes Bacillus subtilis subsp. spizizenii TU-B-10   1 1
No Yes Bacillus subtilis subsp. spizizenii str. W23   1 1
No Yes Bacillus subtilis subsp. natto BEST195   1 1
No Yes Bacillus licheniformis DSM 13 = ATCC 14580   2 2
No Yes Bacillus infantis NRRL B-14911   1 1
No Yes Bacillus cereus subsp. cytotoxis NVH 391-98   3 3
No Yes Bacillus toyonensis BCT-7112   5 5
No Yes Bacillus thuringiensis HD-771   7 7
No Yes Bacillus thuringiensis HD-789   5 5
No Yes Bacillus thuringiensis MC28   7 7
No Yes Bacillus thuringiensis serovar chinensis CT-43   5 5
No Yes Bacillus thuringiensis YBT-1518   6 6
No Yes Bacillus thuringiensis Bt407   5 5
No Yes Bacillus thuringiensis serovar konkukian str. 97-27   3 3
No Yes Bacillus thuringiensis serovar kurstaki str. HD73   7 7
No Yes Bacillus thuringiensis BMB171   5 5
No Yes Bacillus thuringiensis serovar finitimus YBT-020   2 2
No Yes Bacillus thuringiensis serovar thuringiensis str. IS5056   6 6
No Yes Bacillus cereus FRI-35   3 3
No Yes Bacillus cereus biovar anthracis str. CI   3 3
No Yes Bacillus cereus AH820   5 5
No Yes Bacillus cereus AH187   5 5
No Yes Bacillus cereus B4264   4 4
No Yes Bacillus cereus G9842   6 6
No Yes Bacillus cereus Q1   3 3
No Yes Bacillus cereus F837/76   4 4
No Yes Bacillus cereus NC7401   5 5
No Yes Bacillus cereus E33L   3 3
No Yes Bacillus cereus ATCC 14579   5 5
No Yes Bacillus cereus ATCC 10987   3 3
No Yes Bacillus anthracis str. H9401   5 5
No Yes Bacillus anthracis str. CDC 684   5 5
No Yes Bacillus anthracis str. 'Ames Ancestor'   5 5
No Yes Bacillus anthracis str. Sterne   5 5
No Yes Bacillus anthracis str. Ames   5 5
No Yes Bacillus megaterium WSH-002   1 1
No Yes Bacillus megaterium QM B1551   1 1
No Yes Bacillus coagulans 36D1   1 1
No Yes Staphylococcus aureus subsp. aureus MSHR1132   2 2
No Yes Staphylococcus pseudintermedius ED99   1 1
No Yes Staphylococcus pasteuri SP1   2 2
No Yes Staphylococcus lugdunensis N920143   1 1
No Yes Staphylococcus warneri SG1   1 1
No Yes Staphylococcus epidermidis ATCC 12228   1 1
No Yes Staphylococcus aureus CA-347   4 4
No Yes Staphylococcus aureus Bmb9393   1 1
No Yes Staphylococcus aureus M1   1 1
No Yes Staphylococcus aureus 08BA02176   1 1
No Yes Staphylococcus aureus ST228/18412   2 2
No Yes Staphylococcus aureus ST228/18341   2 2
No Yes Staphylococcus aureus ST228/16125   2 2
No Yes Staphylococcus aureus ST228/16035   2 2
No Yes Staphylococcus aureus ST228/15532   2 2
No Yes Staphylococcus aureus ST228/10497   2 2
No Yes Staphylococcus aureus ST228/10388   2 2
No Yes Staphylococcus aureus 04-02981   2 2
No Yes Staphylococcus aureus RF122   2 2
No Yes Staphylococcus aureus subsp. aureus Z172   3 3
No Yes Staphylococcus aureus subsp. aureus 6850   1 1
No Yes Staphylococcus aureus subsp. aureus SA957   1 1
No Yes Staphylococcus aureus subsp. aureus CN1   2 2
No Yes Staphylococcus aureus subsp. aureus SA40   1 1
No Yes Staphylococcus aureus subsp. aureus 11819-97   3 3
No Yes Staphylococcus aureus subsp. aureus M013   1 1
No Yes Staphylococcus aureus subsp. aureus HO 5096 0412   2 2
No Yes Staphylococcus aureus subsp. aureus VC40   1 1
No Yes Staphylococcus aureus subsp. aureus T0131   2 2
No Yes Staphylococcus aureus subsp. aureus LGA251   2 2
No Yes Staphylococcus aureus subsp. aureus ECT-R 2   2 2
No Yes Staphylococcus aureus subsp. aureus JKD6159   2 2
No Yes Staphylococcus aureus subsp. aureus ED133   4 4
No Yes Staphylococcus aureus subsp. aureus ED98   1 1
No Yes Staphylococcus aureus subsp. aureus TW20   3 3
No Yes Staphylococcus aureus subsp. aureus 55/2053   1 1
No Yes Staphylococcus aureus subsp. aureus TCH60   1 1
No Yes Staphylococcus aureus subsp. aureus str. JKD6008   2 2
No Yes Staphylococcus aureus subsp. aureus 71193   2 2
No Yes Staphylococcus aureus subsp. aureus S0385   1 1
No Yes Staphylococcus aureus subsp. aureus str. Newman   2 2
No Yes Staphylococcus aureus subsp. aureus Mu3   2 2
No Yes Staphylococcus aureus subsp. aureus USA300_TCH1516   2 2
No Yes Staphylococcus aureus subsp. aureus USA300_FPR3757   2 2
No Yes Staphylococcus aureus subsp. aureus JH9   3 3
No Yes Staphylococcus aureus subsp. aureus MSSA476   2 2
No Yes Staphylococcus aureus subsp. aureus MRSA252   1 1
No Yes Staphylococcus aureus subsp. aureus MW2   2 2
No Yes Staphylococcus aureus subsp. aureus N315   2 2
No Yes Staphylococcus aureus subsp. aureus Mu50   2 2
No Yes Staphylococcus aureus subsp. aureus COL   2 2
No Yes Staphylococcus aureus subsp. aureus NCTC 8325   2 2
No Yes Ricinus communis (Early assembly) Castor bean 1 1
No Yes 3_050719R (meta-genome)   1 1
No Yes 3_Below_base_of_euphotic (meta-genome)   2 2
No Yes 4_050719Q (meta-genome)   2 2
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   1 1
No Yes Dump top (Dump top) (meta-genome)   1 1
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   4 4
No Yes Fungus garden combined (combined) (meta-genome)   3 3
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   3 2
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   2 2
No Yes Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes   4 4
No Yes Guerrero Negro salt ponds hypersaline mat 04(N) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 10(Z) (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   1 1
No Yes Human Gut Community Subject 7 (meta-genome)   3 3
No Yes Human Gut Community Subject 8 (meta-genome)   5 4
No Yes Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)   13 13
No Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)   1 1
No Yes Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome)   1 1
No Yes NCBI 2017_08 genome   55860 53611
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   7 6
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   2 1
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   1 1
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   4 4
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   4 4
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   4 4
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   2 2
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   3 3
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   1 1
No Yes Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)   8 6
No Yes STRING v9.0.5 (STRING)   404 369
No Yes Termite Protist Endosymbiont Community (meta-genome)   1 1
No Yes Uniprot 2018_03 genome   9245 8271
No Yes Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)   6 6
No Yes Global Ocean Sampling Expedition (GOS)   4 4
No Yes NCBI plasmid sequences (Plasmids)   8 8
No Yes NCBI viral sequences (Viral)   62 61
No Yes PDB chains (SCOP 1.75) (PDB)   1 1
No Yes Protein Data Bank (all PDB sequenc)   3 3
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   7 7
No Yes TargetDB (Targets)   61 60
No Yes UniProt viral sequences (Viral)   47 47

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