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GspK insert domain-like superfamily domain assignments
in
Vibrio vulnificus YJ016

Assignment details

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Vibrio vulnificus YJ016 has 2 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|37678405|ref|NP_933014.1|   1.15e-29   111-223   GspK insert domain-like  
  1.36e-19   225-293   GspK insert domain-like  

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Select to display   Genome       Domains   Proteins
No Yes ALL   62735 62735
No Yes Capitella sp. I   2 1
No Yes Phycisphaera mikurensis NBRC 102666   1 1
No Yes Planctomyces brasiliensis DSM 5305   1 1
No Yes Planctomyces limnophilus DSM 3776   1 1
No Yes Rhodopirellula baltica SH 1   1 1
No Yes Pirellula staleyi DSM 6068   1 1
No Yes Coraliomargarita akajimensis DSM 45221   1 1
No Yes Opitutus terrae PB90-1   1 1
No Yes Turneriella parva DSM 21527   1 1
No Yes Leptospira borgpetersenii serovar Hardjo-bovis str. L550   1 1
No Yes Leptospira interrogans serovar Lai str. IPAV   1 1
No Yes Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'   1 1
No Yes Thermodesulfatator indicus DSM 15286   1 1
No Yes Desulfurispirillum indicum S5   2 1
No Yes Denitrovibrio acetiphilus DSM 12809   1 1
No Yes Flexistipes sinusarabici DSM 4947   1 1
No Yes Thermovibrio ammonificans HB-1   1 1
No Yes Desulfurobacterium thermolithotrophum DSM 11699   1 1
No Yes Persephonella marina EX-H1   1 1
No Yes Hydrogenobaculum sp. SN   1 1
No Yes Hydrogenobaculum sp. HO   1 1
No Yes Hydrogenobacter thermophilus TK-6   1 1
No Yes Candidatus Solibacter usitatus Ellin6076   1 1
No Yes Leptospirillum ferrooxidans C2-3   1 1
No Yes Candidatus Methylomirabilis oxyfera   1 1
No Yes Bdellovibrio bacteriovorus HD100   1 1
No Yes Sulfuricurvum kujiense DSM 16994   1 1
No Yes Sulfurimonas autotrophica DSM 16294   1 1
No Yes Desulfarculus baarsii DSM 2075   1 1
No Yes Desulfobacca acetoxidans DSM 11109   1 1
No Yes Syntrophus aciditrophicus SB   1 1
No Yes Syntrophobacter fumaroxidans MPOB   1 1
No Yes Desulfurivibrio alkaliphilus AHT2   2 1
No Yes Desulfobulbus propionicus DSM 2032   1 1
No Yes Desulfatibacillum alkenivorans AK-01   1 1
No Yes Desulfobacterium autotrophicum HRM2   2 2
No Yes Desulfococcus oleovorans Hxd3   1 1
No Yes Desulfovibrio magneticus RS-1   1 1
No Yes Desulfovibrio salexigens DSM 2638   1 1
No Yes Desulfovibrio africanus str. Walvis Bay   2 2
No Yes Geobacter daltonii FRC-32   1 1
No Yes Geobacter sp. M21   1 1
No Yes Geobacter uraniireducens Rf4   1 1
No Yes Geobacter lovleyi SZ   1 1
No Yes Geobacter bemidjiensis Bem   1 1
No Yes Geobacter sulfurreducens KN400   1 1
No Yes Geobacter metallireducens GS-15   1 1
No Yes Haliangium ochraceum DSM 14365   1 1
No Yes Sorangium cellulosum 'So ce 56'   1 1
No Yes Anaeromyxobacter sp. Fw109-5   1 1
No Yes Stigmatella aurantiaca DW4/3-1   1 1
No Yes Corallococcus coralloides DSM 2259   1 1
No Yes Myxococcus xanthus DK 1622   1 1
No Yes Myxococcus fulvus HW-1   1 1
No Yes Thauera sp. MZ1T   1 1
No Yes Aromatoleum aromaticum EbN1   2 2
No Yes Chromobacterium violaceum ATCC 12472   1 1
No Yes Methylibium petroleiphilum PM1   1 1
No Yes Thiomonas arsenitoxydans   1 1
No Yes Thiomonas intermedia K12   1 1
No Yes Rubrivivax gelatinosus IL144   1 1
No Yes Leptothrix cholodnii SP-6   1 1
No Yes Burkholderia rhizoxinica HKI 454   1 1
No Yes Burkholderia phytofirmans PsJN   1 1
No Yes Burkholderia phymatum STM815   1 1
No Yes Burkholderia xenovorans LB400   1 1
No Yes Ralstonia eutropha JMP134   1 1
No Yes Cupriavidus taiwanensis LMG 19424   1 1
No Yes Cupriavidus metallidurans CH34   1 1
No Yes Cupriavidus necator N-1   1 1
No Yes Ralstonia eutropha H16   1 1
No Yes Ralstonia pickettii 12D   1 1
No Yes Ralstonia solanacearum CFBP2957   1 1
No Yes Burkholderia sp. RPE64   1 1
No Yes Burkholderia sp. CCGE1002   1 1
No Yes Burkholderia thailandensis E264   1 1
No Yes Burkholderia pseudomallei 1106a   1 1
No Yes Burkholderia mallei SAVP1   1 1
No Yes Burkholderia ambifaria AMMD   1 1
No Yes Burkholderia cenocepacia HI2424   1 1
No Yes Burkholderia multivorans ATCC 17616   1 1
No Yes Burkholderia vietnamiensis G4   2 2
No Yes Burkholderia gladioli BSR3   1 1
No Yes Burkholderia glumae BGR1   1 1
No Yes Alicycliphilus denitrificans K601   2 2
No Yes Ramlibacter tataouinensis TTB310   1 1
No Yes Delftia sp. Cs1-4   1 1
No Yes Delftia acidovorans SPH-1   1 1
No Yes Variovorax paradoxus S110   1 1
No Yes Acidovorax ebreus TPSY   1 1
No Yes Acidovorax sp. KKS102   1 1
No Yes Acidovorax sp. JS42   1 1
No Yes Comamonas testosteroni CNB-2   1 1
No Yes Collimonas fungivorans Ter331   1 1
No Yes Pusillimonas sp. T7-7   1 1
No Yes Achromobacter xylosoxidans   2 2
No Yes Nitrosospira multiformis ATCC 25196   1 1
No Yes Sideroxydans lithotrophicus ES-1   1 1
No Yes Parvularcula bermudensis HTCC2503   2 1
No Yes Caulobacter sp. K31   1 1
No Yes Caulobacter crescentus NA1000   2 1
No Yes Phenylobacterium zucineum HLK1   2 1
No Yes Sphingopyxis alaskensis RB2256   2 1
No Yes Novosphingobium aromaticivorans DSM 12444   2 1
No Yes Sphingobium sp. SYK-6   2 1
No Yes Sphingobium japonicum UT26S   2 1
No Yes Sphingobium chlorophenolicum L-1   2 1
No Yes Sphingomonas sp. MM-1   2 1
No Yes Maricaulis maris MCS10   3 2
No Yes Hirschia baltica ATCC 49814   2 1
No Yes Hyphomonas neptunium ATCC 15444   2 1
No Yes Granulibacter bethesdensis CGDNIH1   1 1
No Yes Gluconacetobacter diazotrophicus PAl 5   1 1
No Yes Acidiphilium multivorum AIU301   1 1
No Yes Acidiphilium cryptum JF-5   1 1
No Yes Xanthobacter autotrophicus Py2   1 1
No Yes Methylobacterium chloromethanicum CM4   1 1
No Yes Methylobacterium extorquens AM1   1 1
No Yes Methylobacterium sp. 4-46   1 1
No Yes Methylobacterium nodulans ORS 2060   1 1
No Yes Methylocella silvestris BL2   2 2
No Yes Beijerinckia indica subsp. indica ATCC 9039   1 1
No Yes Nitrobacter hamburgensis X14   1 1
No Yes Bradyrhizobium japonicum USDA 110   1 1
No Yes Bradyrhizobium sp. ORS 278   3 3
No Yes Methylocystis sp. SC2   1 1
No Yes Saccharophagus degradans 2-40   1 1
No Yes Teredinibacter turnerae T7901   1 1
No Yes Cellvibrio japonicus Ueda107   1 1
No Yes Oceanimonas sp. GK1   1 1
No Yes Tolumonas auensis DSM 9187   2 1
No Yes Aeromonas veronii B565   2 1
No Yes Aeromonas salmonicida subsp. salmonicida A449   2 1
No Yes Aeromonas hydrophila subsp. hydrophila ATCC 7966   2 1
No Yes Aliivibrio salmonicida LFI1238   2 1
No Yes Vibrio fischeri MJ11   2 1
No Yes Vibrio sp. Ex25   2 1
No Yes Vibrio harveyi ATCC BAA-1116   2 1
No Yes Vibrio parahaemolyticus RIMD 2210633   2 1
No Yes Vibrio splendidus LGP32   2 1
No Yes Vibrio anguillarum 775   2 1
No Yes Vibrio furnissii NCTC 11218   2 1
No Yes Vibrio vulnificus MO6-24/O   2 1
No Yes Vibrio cholerae O395   2 1
No Yes Photobacterium profundum SS9   2 1
No Yes Psychromonas ingrahamii 37   2 1
No Yes Psychromonas sp. CNPT3   2 1
No Yes Idiomarina loihiensis L2TR   2 1
No Yes Ferrimonas balearica DSM 9799   2 1
No Yes Shewanella piezotolerans WP3   2 1
No Yes Shewanella loihica PV-4   2 1
No Yes Shewanella halifaxensis HAW-EB4   2 1
No Yes Shewanella sediminis HAW-EB3   3 2
No Yes Shewanella denitrificans OS217   2 1
No Yes Shewanella pealeana ATCC 700345   2 1
No Yes Shewanella oneidensis MR-1   2 1
No Yes Shewanella baltica OS185   2 1
No Yes Shewanella woodyi ATCC 51908   2 1
No Yes Shewanella sp. MR-4   2 1
No Yes Shewanella amazonensis SB2B   2 1
No Yes Shewanella violacea DSS12   2 1
No Yes Shewanella frigidimarina NCIMB 400   2 1
No Yes Shewanella putrefaciens CN-32   2 1
No Yes Colwellia psychrerythraea 34H   2 1
No Yes Pseudoalteromonas sp. SM9913   2 1
No Yes Pseudoalteromonas atlantica T6c   3 2
No Yes Pseudoalteromonas haloplanktis TAC125   2 1
No Yes Glaciecola sp. 4H-3-7+YE-5   2 1
No Yes Glaciecola nitratireducens FR1064   3 2
No Yes Marinobacter adhaerens HP15   1 1
No Yes Marinobacter sp. BSs20148   1 1
No Yes Marinobacter hydrocarbonoclasticus ATCC 49840   1 1
No Yes Marinobacter aquaeolei VT8   2 2
No Yes Alteromonas sp. SN2   2 1
No Yes Alteromonas macleodii str. 'Deep ecotype'   2 1
No Yes Kangiella koreensis DSM 16069   2 1
No Yes Hahella chejuensis KCTC 2396   1 1
No Yes Alcanivorax borkumensis SK2   1 1
No Yes Marinomonas mediterranea MMB-1   1 1
No Yes Halomonas elongata DSM 2581   2 1
No Yes Methylomicrobium alcaliphilum   1 1
No Yes Methylomonas methanica MC09   2 2
No Yes Methylococcus capsulatus str. Bath   1 1
No Yes Rhodanobacter denitrificans   1 1
No Yes Frateuria aurantia DSM 6220   1 1
No Yes Pseudoxanthomonas spadix BD-a59   3 2
No Yes Pseudoxanthomonas suwonensis 11-1   2 1
No Yes Stenotrophomonas maltophilia K279a   1 1
No Yes Xylella fastidiosa M23   1 1
No Yes Xanthomonas axonopodis pv. citri str. 306   3 2
No Yes Xanthomonas albilineans GPE PC73   1 1
No Yes Xanthomonas oryzae pv. oryzae PXO99A   1 1
No Yes Xanthomonas campestris pv. campestris str. B100   3 2
No Yes Halothiobacillus neapolitanus c2   1 1
No Yes Alkalilimnicola ehrlichii MLHE-1   1 1
No Yes Thioalkalivibrio sulfidophilus HL-EbGr7   1 1
No Yes Halorhodospira halophila SL1   1 1
No Yes Allochromatium vinosum DSM 180   1 1
No Yes Thiocystis violascens DSM 198   1 1
No Yes Nitrosococcus watsonii C-113   1 1
No Yes Nitrosococcus halophilus Nc4   1 1
No Yes Nitrosococcus oceani ATCC 19707   1 1
No Yes Legionella longbeachae NSW150   1 1
No Yes Legionella pneumophila str. Corby   1 1
No Yes gamma proteobacterium HdN1   1 1
No Yes Rahnella sp. Y9602   2 1
No Yes Rahnella aquatilis CIP 78.65 = ATCC 33071   2 1
No Yes Yersinia pseudotuberculosis IP 31758   1 1
No Yes Yersinia pestis Pestoides F   1 1
No Yes Yersinia enterocolitica subsp. enterocolitica 8081   3 2
No Yes Serratia sp. ATCC 39006   2 1
No Yes Serratia proteamaculans 568   2 1
No Yes Dickeya dadantii Ech703   2 1
No Yes Dickeya zeae Ech1591   3 2
No Yes Pectobacterium wasabiae WPP163   2 1
No Yes Pectobacterium sp. SCC3193   2 1
No Yes Pectobacterium atrosepticum SCRI1043   2 1
No Yes Pectobacterium carotovorum subsp. carotovorum PC1   2 1
No Yes Erwinia tasmaniensis Et1/99   2 1
No Yes Erwinia sp. Ejp617   2 1
No Yes Erwinia pyrifoliae Ep1/96   2 1
No Yes Erwinia amylovora ATCC 49946   2 1
No Yes Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)   2 1
No Yes Shigella dysenteriae Sd197   2 1
No Yes Klebsiella oxytoca E718   4 2
No Yes Klebsiella variicola At-22   2 1
No Yes Klebsiella pneumoniae NTUH-K2044   2 1
No Yes Escherichia fergusonii ATCC 35469   2 1
No Yes Escherichia coli 'BL21-Gold(DE3)pLysS AG'   2 1
No Yes Enterobacter asburiae LF7a   2 1
No Yes Enterobacter cloacae subsp. dissolvens SDM   2 1
No Yes Citrobacter rodentium ICC168   2 1
No Yes Citrobacter koseri ATCC BAA-895   2 1
No Yes Azotobacter vinelandii DJ   1 1
No Yes Pseudomonas sp. TKP   3 2
No Yes Pseudomonas brassicacearum subsp. brassicacearum NFM421   1 1
No Yes Pseudomonas entomophila L48   3 2
No Yes Pseudomonas syringae pv. tomato str. DC3000   1 1
No Yes Pseudomonas stutzeri A1501   1 1
No Yes Pseudomonas putida F1   2 1
No Yes Pseudomonas protegens Pf-5   1 1
No Yes Pseudomonas fluorescens SBW25   2 2
No Yes Pseudomonas mendocina ymp   1 1
No Yes Pseudomonas aeruginosa UCBPP-PA14   2 2
No Yes Pseudomonas sp. VLB120   2 1
No Yes Psychrobacter sp. G   1 1
No Yes Psychrobacter cryohalolentis K5   1 1
No Yes Acinetobacter oleivorans DR1   1 1
No Yes Acinetobacter calcoaceticus PHEA-2   1 1
No Yes Acinetobacter baumannii ATCC 17978   1 1
No Yes Acinetobacter sp. ADP1   1 1
No Yes Thiomicrospira crunogena XCL-2   1 1
No Yes Thioalkalimicrobium cyclicum ALM1   1 1
No Yes Chthonomonas calidirosea T49   1 1
No Yes Leptospira borgpetersenii serovar Hardjo-bovis str. JB197   1 1
No Yes Leptospira interrogans serovar Lai str. 56601   1 1
No Yes Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130   1 1
No Yes Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'   1 1
No Yes Hydrogenobacter thermophilus TK-6   1 1
No Yes Leptospirillum ferriphilum ML-04   1 1
No Yes Bdellovibrio exovorus JSS   1 1
No Yes Bdellovibrio bacteriovorus str. Tiberius   1 1
No Yes Desulfobacula toluolica Tol2   1 1
No Yes Desulfovibrio hydrothermalis AM13 = DSM 14728   2 2
No Yes Desulfovibrio gigas DSM 1382 = ATCC 19364   1 1
No Yes Geobacter sp. M18   1 1
No Yes Geobacter sulfurreducens PCA   1 1
No Yes Sorangium cellulosum So0157-2   1 1
No Yes Myxococcus stipitatus DSM 14675   1 1
No Yes Burkholderia phenoliruptrix BR3459a   1 1
No Yes Ralstonia pickettii 12J   1 1
No Yes Ralstonia solanacearum FQY_4   1 1
No Yes Ralstonia solanacearum Po82   1 1
No Yes Ralstonia solanacearum PSI07   1 1
No Yes Ralstonia solanacearum CMR15   1 1
No Yes Ralstonia solanacearum GMI1000   1 1
No Yes Burkholderia sp. YI23   1 1
No Yes Burkholderia sp. CCGE1003   1 1
No Yes Burkholderia sp. CCGE1001   1 1
No Yes Burkholderia sp. KJ006   2 2
No Yes Burkholderia thailandensis MSMB121   2 2
No Yes Burkholderia pseudomallei MSHR305   1 1
No Yes Burkholderia pseudomallei NCTC 13179   1 1
No Yes Burkholderia pseudomallei BPC006   1 1
No Yes Burkholderia pseudomallei 1026b   1 1
No Yes Burkholderia pseudomallei MSHR346   1 1
No Yes Burkholderia pseudomallei 668   1 1
No Yes Burkholderia pseudomallei 1710b   1 1
No Yes Burkholderia pseudomallei K96243   1 1
No Yes Burkholderia mallei NCTC 10229   1 1
No Yes Burkholderia mallei NCTC 10247   1 1
No Yes Burkholderia mallei ATCC 23344   1 1
No Yes Burkholderia lata   2 2
No Yes Burkholderia ambifaria MC40-6   1 1
No Yes Burkholderia cenocepacia MC0-3   1 1
No Yes Burkholderia cenocepacia AU 1054   1 1
No Yes Burkholderia cenocepacia J2315   1 1
No Yes Burkholderia multivorans ATCC 17616   1 1
No Yes Burkholderia cepacia GG4   1 1
No Yes Candidatus Symbiobacter mobilis Comamonadaceae bacterium CR   1 1
No Yes Alicycliphilus denitrificans BC   2 2
No Yes Variovorax paradoxus B4   1 1
No Yes Variovorax paradoxus EPS   1 1
No Yes Achromobacter xylosoxidans NBRC 15126 = ATCC 27061   2 2
No Yes Sulfuricella denitrificans skB26   1 1
No Yes Caulobacter crescentus CB15   2 1
No Yes Gluconacetobacter diazotrophicus PAl 5   1 1
No Yes Methylobacterium extorquens DM4   1 1
No Yes Rhodopseudomonas palustris BisB18   1 1
No Yes Bradyrhizobium sp. BTAi1   2 2
No Yes Bradyrhizobium oligotrophicum S58   5 5
No Yes Bradyrhizobium japonicum USDA 6   1 1
No Yes Simiduia agarivorans SA1 = DSM 21679   1 1
No Yes Aeromonas hydrophila ML09-119   2 1
No Yes Vibrio fischeri ES114   2 1
No Yes Vibrio sp. EJY3   2 1
No Yes Vibrio parahaemolyticus BB22OP   2 1
No Yes Vibrio alginolyticus NBRC 15630 = ATCC 17749   2 1
No Yes Vibrio anguillarum Listonella anguillarum M3   2 1
No Yes Vibrio nigripulchritudo VibrioScope   2 1
No Yes Vibrio vulnificus CMCP6   2 1
No Yes Vibrio vulnificus YJ016   2 1
No Yes Vibrio cholerae LMA3984-4   2 1
No Yes Vibrio cholerae M66-2   2 1
No Yes Vibrio cholerae O395   2 1
No Yes Vibrio cholerae IEC224   2 1
No Yes Vibrio cholerae O1 str. 2010EL-1786   2 1
No Yes Vibrio cholerae MJ-1236   2 1
No Yes Vibrio cholerae O1 biovar El Tor str. N16961   2 1
No Yes Idiomarina loihiensis GSL 199   2 1
No Yes Shewanella sp. W3-18-1   2 1
No Yes Shewanella sp. ANA-3   2 1
No Yes Shewanella baltica BA175   2 1
No Yes Shewanella baltica OS678   2 1
No Yes Shewanella baltica OS117   2 1
No Yes Shewanella baltica OS223   2 1
No Yes Shewanella baltica OS195   2 1
No Yes Shewanella baltica OS155   2 1
No Yes Shewanella sp. MR-7   2 1
No Yes Shewanella putrefaciens 200   2 1
No Yes Glaciecola psychrophila 170   2 1
No Yes Alteromonas macleodii str. 'Ionian Sea UM4b'   2 1
No Yes Alteromonas macleodii str. 'Ionian Sea UM7'   2 1
No Yes Alteromonas macleodii str. 'Ionian Sea U8'   2 1
No Yes Alteromonas macleodii str. 'Ionian Sea U7'   2 1
No Yes Alteromonas macleodii str. 'Ionian Sea U4'   2 1
No Yes Alteromonas macleodii str. 'Aegean Sea MED64'   2 1
No Yes Alteromonas macleodii str. 'English Channel 615'   2 1
No Yes Alteromonas macleodii AltDE1   2 1
No Yes Alteromonas macleodii str. 'English Channel 673'   2 1
No Yes Alteromonas macleodii str. 'Balearic Sea AD45'   2 1
No Yes Alteromonas macleodii str. 'Black Sea 11'   2 1
No Yes Alteromonas macleodii ATCC 27126   2 1
No Yes Alcanivorax dieselolei B5   1 1
No Yes Thalassolituus oleivorans MIL-1   2 1
No Yes Stenotrophomonas maltophilia D457   1 1
No Yes Stenotrophomonas maltophilia JV3   1 1
No Yes Stenotrophomonas maltophilia R551-3   1 1
No Yes Xylella fastidiosa subsp. fastidiosa GB514   1 1
No Yes Xylella fastidiosa M12   1 1
No Yes Xylella fastidiosa Temecula1   1 1
No Yes Xylella fastidiosa 9a5c   1 1
No Yes Xanthomonas citri subsp. citri Aw12879   3 2
No Yes Xanthomonas campestris pv. vesicatoria str. 85-10   3 2
No Yes Xanthomonas axonopodis pv. citrumelo F1   3 2
No Yes Xanthomonas axonopodis Xac29-1   3 2
No Yes Xanthomonas oryzae pv. oryzicola BLS256   1 1
No Yes Xanthomonas oryzae pv. oryzae MAFF 311018   1 1
No Yes Xanthomonas oryzae pv. oryzae KACC 10331   1 1
No Yes Xanthomonas campestris pv. raphani 756C   3 2
No Yes Xanthomonas campestris pv. campestris str. 8004   3 2
No Yes Xanthomonas campestris pv. campestris str. ATCC 33913   3 2
No Yes Thioalkalivibrio nitratireducens DSM 14787   2 2
No Yes Thioflavicoccus mobilis 8321   1 1
No Yes Legionella pneumophila str. Paris   1 1
No Yes Legionella pneumophila str. Lens   1 1
No Yes Legionella pneumophila subsp. pneumophila LPE509   1 1
No Yes Legionella pneumophila subsp. pneumophila str. Thunder Bay   1 1
No Yes Legionella pneumophila subsp. pneumophila str. Philadelphia 1   1 1
No Yes Legionella pneumophila subsp. pneumophila   1 1
No Yes Legionella pneumophila subsp. pneumophila   1 1
No Yes Legionella pneumophila subsp. pneumophila ATCC 43290   1 1
No Yes Legionella pneumophila 2300/99 Alcoy   1 1
No Yes Rahnella aquatilis HX2   2 1
No Yes Yersinia pseudotuberculosis PB1/+   1 1
No Yes Yersinia pseudotuberculosis YPIII   1 1
No Yes Yersinia pseudotuberculosis IP 32953   1 1
No Yes Yersinia pestis biovar Microtus str. 91001   1 1
No Yes Yersinia pestis A1122   1 1
No Yes Yersinia pestis Z176003   1 1
No Yes Yersinia pestis D182038   1 1
No Yes Yersinia pestis D106004   1 1
No Yes Yersinia pestis biovar Medievalis str. Harbin 35   1 1
No Yes Yersinia pestis Nepal516   1 1
No Yes Yersinia pestis Antiqua   1 1
No Yes Yersinia pestis Angola   1 1
No Yes Yersinia pestis CO92   1 1
No Yes Yersinia pestis KIM10+   1 1
No Yes Yersinia enterocolitica subsp. palearctica 105.5R(r)   1 1
No Yes Yersinia enterocolitica subsp. palearctica Y11   1 1
No Yes Serratia plymuthica S13   2 1
No Yes Serratia marcescens FGI94   2 1
No Yes Dickeya dadantii Ech586   2 1
No Yes Dickeya dadantii 3937   3 2
No Yes Pectobacterium carotovorum subsp. carotovorum PCC21   2 1
No Yes Erwinia pyrifoliae DSM 12163   2 1
No Yes Erwinia amylovora CFBP1430   2 1
No Yes Raoultella ornithinolytica B6   2 1
No Yes Shigella dysenteriae 1617   2 1
No Yes Shigella boydii Sb227   2 1
No Yes Klebsiella oxytoca KCTC 1686   4 2
No Yes Klebsiella pneumoniae JM45   2 1
No Yes Klebsiella pneumoniae CG43   2 1
No Yes Klebsiella pneumoniae KCTC 2242   2 1
No Yes Klebsiella pneumoniae 342   2 1
No Yes Klebsiella pneumoniae subsp. pneumoniae 1084   2 1
No Yes Klebsiella pneumoniae subsp. pneumoniae HS11286   2 1
No Yes Klebsiella pneumoniae subsp. pneumoniae MGH 78578   2 1
No Yes Klebsiella pneumoniae subsp. rhinoscleromatis SB3432   2 1
No Yes Escherichia coli E24377A   2 1
No Yes Escherichia coli E. coli PMV-1   4 2
No Yes Escherichia coli JJ1886   4 2
No Yes Escherichia coli LY180   2 1
No Yes Escherichia coli APEC O78   4 2
No Yes Escherichia coli O7:K1 str. CE10   2 1
No Yes Escherichia coli O104:H4 str. 2009EL-2050   2 1
No Yes Escherichia coli O104:H4 str. 2009EL-2071   2 1
No Yes Escherichia coli O104:H4 str. 2011C-3493   2 1
No Yes Escherichia coli NA114   4 2
No Yes Escherichia coli P12b   4 2
No Yes Escherichia coli str. 'clone D i2'   4 2
No Yes Escherichia coli str. 'clone D i14'   4 2
No Yes Escherichia coli UM146   4 2
No Yes Escherichia coli 042   2 1
No Yes Escherichia coli Xuzhou21   2 1
No Yes Escherichia coli IHE3034   4 2
No Yes Escherichia coli UMNK88   4 2
No Yes Escherichia coli O83:H1 str. NRG 857C   4 2
No Yes Escherichia coli ABU 83972   4 2
No Yes Escherichia coli KO11FL   2 1
No Yes Escherichia coli KO11FL   2 1
No Yes Escherichia coli LF82   4 2
No Yes Escherichia coli ED1a   2 1
No Yes Escherichia coli IAI39   2 1
No Yes Escherichia coli UMN026   2 1
No Yes Escherichia coli 55989   2 1
No Yes Escherichia coli S88   4 2
No Yes Escherichia coli IAI1   2 1
No Yes Escherichia coli W   2 1
No Yes Escherichia coli W   2 1
No Yes Escherichia coli DH1   2 1
No Yes Escherichia coli DH1   2 1
No Yes Escherichia coli ATCC 8739   2 1
No Yes Escherichia coli BL21(DE3)   4 2
No Yes Escherichia coli BL21(DE3)   4 2
No Yes Escherichia coli SMS-3-5   2 1
No Yes Escherichia coli SE15   4 2
No Yes Escherichia coli SE11   2 1
No Yes Escherichia coli APEC O1   4 2
No Yes Escherichia coli O103:H2 str. 12009   2 1
No Yes Escherichia coli UTI89   4 2
No Yes Escherichia coli 536   4 2
No Yes Escherichia coli HS   4 2
No Yes Escherichia coli ETEC H10407   4 2
No Yes Escherichia coli O55:H7 str. RM12579   4 2
No Yes Escherichia coli O55:H7 str. CB9615   4 2
No Yes Escherichia coli CFT073   3 2
No Yes Escherichia coli O111:H- str. 11128   2 1
No Yes Escherichia coli O127:H6 str. E2348/69   2 1
No Yes Escherichia coli O157:H7 str. TW14359   2 1
No Yes Escherichia coli O157:H7 str. EC4115   2 1
No Yes Escherichia coli O157:H7 str. Sakai   2 1
No Yes Escherichia coli O157:H7 str. EDL933   2 1
No Yes Escherichia coli BW2952   2 1
No Yes Escherichia coli str. K-12 substr. MG1655   2 1
No Yes Escherichia coli str. K-12 substr. W3110   2 1
No Yes Escherichia coli str. K-12 substr. DH10B   2 1
No Yes Escherichia coli B str. REL606   4 2
No Yes Enterobacter cloacae SCF1   2 1
No Yes Enterobacter cloacae EcWSU1   2 1
No Yes Enterobacter cloacae subsp. cloacae ENHKU01   4 2
No Yes Enterobacter cloacae subsp. cloacae NCTC 9394   2 1
No Yes Enterobacter cloacae subsp. cloacae ATCC 13047   2 1
No Yes Azotobacter vinelandii CA6   1 1
No Yes Azotobacter vinelandii CA   1 1
No Yes Pseudomonas syringae pv. phaseolicola 1448A   2 2
No Yes Pseudomonas syringae pv. syringae B728a   1 1
No Yes Pseudomonas stutzeri CCUG 29243   1 1
No Yes Pseudomonas stutzeri DSM 10701   2 1
No Yes Pseudomonas stutzeri DSM 4166   2 2
No Yes Pseudomonas stutzeri RCH2   1 1
No Yes Pseudomonas stutzeri ATCC 17588 = LMG 11199   1 1
No Yes Pseudomonas monteilii SB3101   2 1
No Yes Pseudomonas monteilii SB3078   2 1
No Yes Pseudomonas putida H8234   2 1
No Yes Pseudomonas putida HB3267   2 1
No Yes Pseudomonas putida NBRC 14164   2 1
No Yes Pseudomonas putida DOT-T1E   2 1
No Yes Pseudomonas putida S16   2 1
No Yes Pseudomonas putida BIRD-1   2 1
No Yes Pseudomonas putida W619   3 2
No Yes Pseudomonas putida ND6   4 2
No Yes Pseudomonas putida KT2440   2 1
No Yes Pseudomonas putida GB-1   2 1
No Yes Pseudomonas protegens CHA0   1 1
No Yes Pseudomonas poae RE*1-1-14   1 1
No Yes Pseudomonas fluorescens F113   2 2
No Yes Pseudomonas fluorescens R124   1 1
No Yes Pseudomonas fluorescens Pf0-1   1 1
No Yes Pseudomonas resinovorans NBRC 106553   2 1
No Yes Pseudomonas mendocina NK-01   2 1
No Yes Pseudomonas aeruginosa SCV20265   3 2
No Yes Pseudomonas aeruginosa MTB-1   3 2
No Yes Pseudomonas aeruginosa LES431   2 2
No Yes Pseudomonas aeruginosa RP73   3 2
No Yes Pseudomonas aeruginosa B136-33   3 2
No Yes Pseudomonas aeruginosa PA1R   3 2
No Yes Pseudomonas aeruginosa PA1   3 2
No Yes Pseudomonas aeruginosa DK2   3 2
No Yes Pseudomonas aeruginosa NCGM2.S1   3 2
No Yes Pseudomonas aeruginosa M18   2 2
No Yes Pseudomonas aeruginosa LESB58   2 2
No Yes Pseudomonas aeruginosa PA7   5 3
No Yes Pseudomonas aeruginosa PAO1   3 2
No Yes Acinetobacter genomosp. 13TU RUH2624   1 1
No Yes Acinetobacter sp. SH024   1 1
No Yes Acinetobacter calcoaceticus ruh2202   1 1
No Yes Acinetobacter baumannii ZW85-1   1 1
No Yes Acinetobacter baumannii TYTH-1   1 1
No Yes Acinetobacter baumannii BJAB0868   1 1
No Yes Acinetobacter baumannii BJAB0715   1 1
No Yes Acinetobacter baumannii BJAB07104   1 1
No Yes Acinetobacter baumannii TCDC-AB0715   1 1
No Yes Acinetobacter baumannii D1279779   1 1
No Yes Acinetobacter baumannii MDR-TJ   1 1
No Yes Acinetobacter baumannii 1656-2   1 1
No Yes Acinetobacter baumannii ATCC 19606   1 1
No Yes Acinetobacter baumannii AB307-0294   1 1
No Yes Acinetobacter baumannii AYE   1 1
No Yes Acinetobacter baumannii SDF   1 1
No Yes Acinetobacter baumannii MDR-ZJ06   1 1
No Yes Acinetobacter baumannii AB0057   1 1
No Yes Acinetobacter baumannii ACICU   1 1
No Yes Acinetobacter radioresistens SH164   1 1
No Yes Acinetobacter junii SH205   1 1
No Yes Acinetobacter johnsonii SH046   1 1
No Yes Acinetobacter lwoffii SH145   1 1
No Yes Ricinus communis (Early assembly) Castor bean 1 1
No Yes Vibrio campbellii ATCC BAA-1116 (Duplicate of NC)   2 1
No Yes 1_Upper_euphotic (meta-genome)   2 1
No Yes 2_050719S (meta-genome)   1 1
No Yes 2_Base_of_chrolophyll_max (meta-genome)   2 2
No Yes 4_050719Q (meta-genome)   2 2
No Yes 5_050719P (meta-genome)   2 1
No Yes 6_Upper_euphotic (meta-genome)   1 1
No Yes 7_Oxygen_minimum_layer (meta-genome)   1 1
No Yes Air microbial communities Singapore indoor air filters 1 (meta-genome)   8 6
No Yes Air microbial communities Singapore indoor air filters 2 (meta-genome)   3 2
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   2 1
No Yes Combined (meta-genome)   12 9
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   14 11
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   2 2
No Yes Dump bottom (Dump bottom) (meta-genome)   39 33
No Yes Dump top (Dump top) (meta-genome)   7 7
No Yes Endophytic microbiome from Rice (meta-genome)   5 5
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #1 (meta-genome)   3 3
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome)   7 6
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #3 (meta-genome)   2 2
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   6 6
No Yes Fungus garden combined (combined) (meta-genome)   10 6
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   16 9
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   19 14
No Yes Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes   2 2
No Yes Guerrero Negro salt ponds hypersaline mat 06(P) (meta-genome)   2 2
No Yes Guerrero Negro salt ponds hypersaline mat 07(S) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 10(Z) (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP11 from Octopus Springs (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP14 from OSP Spring (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome)   2 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome)   3 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome)   1 1
No Yes Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)   3 2
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   1 1
No Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome)   5 5
No Yes Marine anammox bioreactor enriched for Scalindua species (meta-genome)   2 2
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   21 21
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   6 6
No Yes Methylotrophic community from Lake Washington sediment Formate enrichment (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   9 9
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   3 3
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)   2 2
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   3 3
No Yes Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome)   3 3
No Yes Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome)   1 1
No Yes NCBI 2017_08 genome   51867 32868
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   15 14
No Yes Olavius algarvensis endosymbiont metagenome Delta1 (meta-genome)   1 1
No Yes Olavius algarvensis endosymbiont metagenome Delta4 (meta-genome)   1 1
No Yes Olavius algarvensis endosymbiont metagenome Gamma3 (meta-genome)   1 1
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   13 10
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   4 3
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   9 8
No Yes Sludge/Australian, Phrap Assembly (meta-genome)   4 4
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   10 9
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   15 15
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   9 8
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   3 3
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   6 4
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   11 11
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   10 10
No Yes Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)   2 2
No Yes STRING v9.0.5 (STRING)   404 288
No Yes Switchgrass field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing switchgr (meta-genome)   2 2
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   15 15
No Yes Uniprot 2018_03 genome   8287 6255
No Yes Uranium Contaminated Groundwater FW106 (meta-genome)   2 2
No Yes Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)   2 2
No Yes Global Ocean Sampling Expedition (GOS)   354 247
No Yes NCBI plasmid sequences (Plasmids)   23 12
No Yes PDB chains (SCOP 1.75) (PDB)   2 1
No Yes Protein Data Bank (all PDB sequenc)   4 2
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   6 6
No Yes TargetDB (Targets)   34 22

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