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AF1862-like superfamily domain assignments
in
Deinococcus geothermalis DSM 11300

Assignment details

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Deinococcus geothermalis DSM 11300 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|94985066|ref|YP_604430.1|   4.18e-30   29-160   Cas Cmr5-like  

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Select to display   Genome       Domains   Proteins
No Yes ALL   2007 2007
No Yes Thermobaculum terrenum ATCC BAA-798   1 1
No Yes Rubrobacter xylanophilus DSM 9941   1 1
No Yes Thermobifida fusca YX   1 1
No Yes Caldilinea aerophila DSM 14535 = NBRC 104270   1 1
No Yes Anaerolinea thermophila UNI-1   1 1
No Yes Thermomicrobium roseum DSM 5159   1 1
No Yes Herpetosiphon aurantiacus DSM 785   2 2
No Yes Truepera radiovictrix DSM 17093   2 2
No Yes Deinococcus geothermalis DSM 11300   1 1
No Yes Marinithermus hydrothermalis DSM 14884   1 1
No Yes Meiothermus silvanus DSM 9946   1 1
No Yes Meiothermus ruber DSM 1279   1 1
No Yes Thermus sp. CCB_US3_UF1   1 1
No Yes Thermus thermophilus HB27   1 1
No Yes Candidatus Desulforudis audaxviator MP104C   1 1
No Yes Pelotomaculum thermopropionicum SI   1 1
No Yes Syntrophobotulus glycolicus DSM 8271   1 1
No Yes Desulfotomaculum acetoxidans DSM 771   1 1
No Yes Desulfotomaculum kuznetsovii DSM 6115   1 1
No Yes Syntrophothermus lipocalidus DSM 12680   1 1
No Yes Clostridium botulinum A str. ATCC 3502   1 1
No Yes Caldicellulosiruptor obsidiansis OB47   1 1
No Yes Caldicellulosiruptor kronotskyensis 2002   1 1
No Yes Thermoanaerobacterium thermosaccharolyticum DSM 571   1 1
No Yes Thermoanaerobacter tengcongensis MB4   1 1
No Yes Thermoanaerobacter mathranii subsp. mathranii str. A3   1 1
No Yes Thermoanaerobacter italicus Ab9   1 1
No Yes Halothermothrix orenii H 168   1 1
No Yes Kyrpidia tusciae DSM 2912   1 1
No Yes Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446   1 1
No Yes Paenibacillus terrae HPL-003   1 1
No Yes Geobacillus thermoglucosidasius C56-YS93   1 1
No Yes Geobacillus sp. GHH01   1 1
No Yes Geobacillus sp. WCH70   1 1
No Yes Bacillus halodurans C-125   1 1
No Yes Chloroherpeton thalassium ATCC 35110   1 1
No Yes Haliscomenobacter hydrossis DSM 1100   1 1
No Yes Flexibacter litoralis DSM 6794   1 1
No Yes Porphyromonas gingivalis ATCC 33277   1 1
No Yes Isosphaera pallida ATCC 43644   1 1
No Yes Fretibacterium fastidiosum   1 1
No Yes Anaerobaculum mobile DSM 13181   1 1
No Yes Treponema azotonutricium ZAS-9   1 1
No Yes Thermodesulfatator indicus DSM 15286   1 1
No Yes Flexistipes sinusarabici DSM 4947   1 1
No Yes Marinitoga piezophila KA3   1 1
No Yes Mesotoga prima MesG1.Ag.4.2   1 1
No Yes Fervidobacterium pennivorans DSM 9078   1 1
No Yes Thermosipho melanesiensis BI429   1 1
No Yes Thermosipho africanus TCF52B   1 1
No Yes Thermotoga thermarum DSM 5069   1 1
No Yes Thermotoga sp. RQ2   1 1
No Yes Sulfurihydrogenibium sp. YO3AOP1   1 1
No Yes Thermocrinis albus DSM 14484   1 1
No Yes Aquifex aeolicus VF5   1 1
No Yes Candidatus Chloracidobacterium thermophilum B   2 2
No Yes Syntrophus aciditrophicus SB   1 1
No Yes Haliangium ochraceum DSM 14365   1 1
No Yes Sorangium cellulosum 'So ce 56'   1 1
No Yes Myxococcus xanthus DK 1622   1 1
No Yes Myxococcus fulvus HW-1   1 1
No Yes Candidatus Accumulibacter phosphatis clade IIA str. UW-1   1 1
No Yes Rhodospirillum centenum SW   1 1
No Yes Azospirillum lipoferum 4B   1 1
No Yes Teredinibacter turnerae T7901   1 1
No Yes Marinomonas sp. MWYL1   1 1
No Yes Marinomonas mediterranea MMB-1   1 1
No Yes Thioalkalivibrio sulfidophilus HL-EbGr7   1 1
No Yes Halorhodospira halophila SL1   1 1
No Yes Allochromatium vinosum DSM 180   1 1
No Yes Candidatus Korarchaeum cryptofilum OPF8   1 1
No Yes Acidilobus saccharovorans 345-15   1 1
No Yes Fervidicoccus fontis Kam940   1 1
No Yes Pyrolobus fumarii 1A   1 1
No Yes Hyperthermus butylicus DSM 5456   1 1
No Yes Ignicoccus hospitalis KIN4/I   1 1
No Yes Desulfurococcus kamchatkensis 1221n   1 1
No Yes Sulfolobus tokodaii str. 7   1 1
No Yes Sulfolobus solfataricus P2   3 3
No Yes Thermofilum sp. 1910b   1 1
No Yes Thermofilum pendens Hrk 5   1 1
No Yes Vulcanisaeta moutnovskia 768-28   1 1
No Yes Vulcanisaeta distributa DSM 14429   1 1
No Yes Caldivirga maquilingensis IC-167   1 1
No Yes Pyrobaculum sp. 1860   2 2
No Yes Pyrobaculum calidifontis JCM 11548   1 1
No Yes Pyrobaculum arsenaticum DSM 13514   1 1
No Yes Pyrobaculum oguniense TE7   1 1
No Yes Thermoproteus neutrophilus V24Sta   1 1
No Yes Methanosaeta harundinacea 6Ac   1 1
No Yes Methanosaeta thermophila PT   1 1
No Yes Archaeoglobus fulgidus DSM 4304   1 1
No Yes Pyrococcus yayanosii CH1   1 1
No Yes Pyrococcus furiosus COM1   1 1
No Yes Methanococcus voltae A3   2 2
No Yes Methanococcus vannielii SB   1 1
No Yes Thermus thermophilus HB8   1 1
No Yes Clostridium botulinum H04402 065   1 1
No Yes Clostridium botulinum F str. 230613   1 1
No Yes Clostridium botulinum F str. Langeland   1 1
No Yes Clostridium botulinum Ba4 str. 657   1 1
No Yes Clostridium botulinum A str. Hall   1 1
No Yes Clostridium botulinum A str. ATCC 19397   1 1
No Yes Thermoanaerobacterium thermosaccharolyticum M0795   1 1
No Yes Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1   1 1
No Yes Paenibacillus larvae subsp. larvae DSM 25430   1 1
No Yes Geobacillus sp. Y412MC52   1 1
No Yes Geobacillus sp. Y412MC61   1 1
No Yes Porphyromonas gingivalis TDC60   1 1
No Yes Porphyromonas gingivalis W83   1 1
No Yes Desulfovibrio hydrothermalis AM13 = DSM 14728   2 2
No Yes Myxococcus stipitatus DSM 14675   1 1
No Yes Candidatus Symbiobacter mobilis Comamonadaceae bacterium CR   1 1
No Yes Shewanella putrefaciens 200   1 1
No Yes Thioalkalivibrio nitratireducens DSM 14787   1 1
No Yes Thioflavicoccus mobilis 8321   1 1
No Yes Sulfolobus islandicus LAL14/1   2 2
No Yes Sulfolobus islandicus REY15A   2 2
No Yes Sulfolobus islandicus HVE10/4   1 1
No Yes Sulfolobus islandicus Y.G.57.14   3 3
No Yes Sulfolobus islandicus L.S.2.15   2 2
No Yes Sulfolobus islandicus M.16.27   1 1
No Yes Sulfolobus islandicus M.14.25   1 1
No Yes Sulfolobus islandicus M.16.4   1 1
No Yes Sulfolobus islandicus L.D.8.5   1 1
No Yes Sulfolobus solfataricus 98/2   1 1
No Yes Pyrococcus furiosus DSM 3638   1 1
No Yes 1_050719N (meta-genome)   13 13
No Yes 2_050719S (meta-genome)   9 9
No Yes 3_050719R (meta-genome)   11 11
No Yes 4_050719Q (meta-genome)   7 7
No Yes 5_050719P (meta-genome)   10 10
No Yes 6_Upper_euphotic (meta-genome)   1 1
No Yes Activated sludge plasmid pool Morges-2009 (Newbler) (meta-genome)   2 2
No Yes Bath Hot Springs, filamentous community (meta-genome)   5 5
No Yes Bath Hot Springs, planktonic community (meta-genome)   12 12
No Yes Dump bottom (Dump bottom) (meta-genome)   1 1
No Yes Dump top (Dump top) (meta-genome)   2 2
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   1 1
No Yes Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 02(H) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 05(O) (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP8 from OSP Spring (meta-genome)   5 5
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP1 from Alice Springs, Crater Hills (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP10 from Narrow Gauge (meta-genome)   3 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP11 from Octopus Springs (meta-genome)   7 7
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP12 from Calcite Springs, Tower Falls Region (meta-genome)   8 8
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP13 from Bechler Spring (meta-genome)   10 10
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP14 from OSP Spring (meta-genome)   3 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   3 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome)   5 5
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime (meta-genome)   6 6
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome)   9 9
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP19 from Cistern Spring (meta-genome)   3 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome)   6 6
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP3 from Monarch Geyser, Norris Geyser Basin (meta-genome)   3 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP4 from Joseph's Coat Springs (meta-genome)   3 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome)   6 6
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP9 from Dragon Spring, Norris Geyser Basin (meta-genome)   10 10
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   3 3
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   1 1
No Yes NCBI 2017_08 genome   844 844
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   2 2
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   2 2
No Yes Sludge/US, Jazz Assembly (meta-genome)   1 1
No Yes Sludge/US, Phrap Assembly (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   3 3
No Yes Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   66 66
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   1 1
No Yes Uniprot 2018_03 genome   625 624
No Yes Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)   8 8
No Yes Global Ocean Sampling Expedition (GOS)   2 2
No Yes NCBI plasmid sequences (Plasmids)   6 6
No Yes PDB chains (SCOP 1.75) (PDB)   1 1
No Yes Protein Data Bank (all PDB sequenc)   11 11
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   17 17
No Yes TargetDB (Targets)   5 5

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