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CPF0428-like family domain assignments
in
Clostridium perfringens ATCC 13124

Assignment details

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Clostridium perfringens ATCC 13124 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|110800851|ref|YP_694885.1|   5.39e-179   0.0000000000000974   8-422   2nvp A:2-427  

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Select to display   Genome       Domains   Proteins
No Yes ALL   23253 23253
No Yes Adineta vaga   6 6
No Yes Proterospongia sp. ATCC 50818   1 1
No Yes Capsaspora owczarzaki ATCC 30864   2 2
No Yes Phycomyces blakesleeanus   2 2
No Yes Rhizopus oryzae RA 99-880   2 2
No Yes Mucor circinelloides   2 2
No Yes Rhizomucor miehei CAU432   1 1
No Yes Sporisorium reilianum 22   1 1
No Yes Ustilago maydis   1 1
No Yes Mixia osmundae IAM 14324 v1.0   1 1
No Yes Sphaerobolus stellatus v1.0   1 1
No Yes Piloderma croceum F 1598 v1.0   1 1
No Yes Serpula lacrymans var. lacrymans S7.9   1 1
No Yes Coniophora puteana   1 1
No Yes Hydnomerulius pinastri v2.0   1 1
No Yes Paxillus rubicundulus Ve08.2h10 v1.0   1 1
No Yes Coprinopsis cinerea okayama7 130 v3   1 1
No Yes Pleurotus ostreatus Oyster mushroom 1 1
No Yes Amanita thiersii Skay4041 v1.0   1 1
No Yes Amanita muscaria Koide v1.0 Fly agaric 1 1
No Yes Galerina marginata v1.0   1 1
No Yes Hebeloma cylindrosporum h7 v2.0   1 1
No Yes Agaricus bisporus var. bisporus   1 1
No Yes Schizophyllum commune   1 1
No Yes Stereum hirsutum FP-91666 SS1 v1.0   1 1
No Yes Heterobasidion annosum   1 1
No Yes Gloeophyllum trabeumv1.0   1 1
No Yes Punctularia strigosozonata v1.0   1 1
No Yes Fomitiporia mediterranea v1.0   1 1
No Yes Postia placenta   1 1
No Yes Wolfiporia cocos MD-104 SS10 v1.0   1 1
No Yes Fomitopsis pinicolav1.0   1 1
No Yes Fomitopsis pinicola FP-58527 SS1 v3.0   1 1
No Yes Phanerochaete chrysosporium RP-78 2.1   1 1
No Yes Dichomitus squalens   1 1
No Yes Trametes versicolor v1.0   1 1
No Yes Daldinia eschscholzii EC12 v1.0   3 3
No Yes Apiospora montagnei NRRL 25634 v1.0   4 4
No Yes Magnaporthe poae ATCC 64411 22   3 3
No Yes Magnaporthe grisea 70-15   4 4
No Yes Podospora anserina   3 3
No Yes Sporotrichum thermophile ATCC 42464   3 3
No Yes Thielavia terrestris NRRL 8126   3 3
No Yes Chaetomium globosum CBS 148.51   3 3
No Yes Neurospora tetrasperma   3 3
No Yes Neurospora discreta FGSC 8579   3 3
No Yes Neurospora crassa OR74A   3 3
No Yes Cryphonectria parasitica Chestnut blight fungus 4 4
No Yes Verticillium albo-atrum VaMs.102   1 1
No Yes Verticillium dahliae VdLs.17   1 1
No Yes Acremonium alcalophilumv 1.0   2 2
No Yes Glomerella graminicola 22   3 3
No Yes Fusarium graminearum   3 3
No Yes Nectria haematococca mpVI   2 2
No Yes Fusarium oxysporum f. sp. lycopersici 4286   4 4
No Yes Fusarium verticillioides 7600   3 3
No Yes Trichoderma asperellum CBS 433.97 v1.0   2 2
No Yes Trichoderma atroviride   2 2
No Yes Trichoderma citrinoviride v1.0   2 2
No Yes Trichoderma reesei 1.2   2 2
No Yes Trichoderma virens Gv29-8   2 2
No Yes Trichoderma longibrachiatum ATCC 18648 v1.0   2 2
No Yes Trichoderma harzianum CBS 226.95 v1.0   2 2
No Yes Amorphotheca resinae v1.0 Creosote fungus 2 2
No Yes Botrytis cinerea B05.10   4 4
No Yes Sclerotinia sclerotiorum   3 3
No Yes Blumeria graminis 22   2 2
No Yes Didymella exigua CBS 183.55 v1.0   3 3
No Yes Leptosphaeria maculans 22   3 3
No Yes Setosphaeria turcica v1.0   3 3
No Yes Cochliobolus miyabeanus ATCC 44560 v1.0   3 3
No Yes Cochliobolus victoriae FI3 v1.0   3 3
No Yes Cochliobolus carbonum 26-R-13 v1.0   3 3
No Yes Cochliobolus heterostrophus Southern corn leaf blight pathogen 3 3
No Yes Alternaria brassicicola   1 1
No Yes Cochliobolus lunatus m118 v2.0   3 3
No Yes Pyrenophora teres f. teres 22   3 3
No Yes Pyrenophora tritici-repentis   3 3
No Yes Stagonospora nodorum   3 3
No Yes Mycosphaerella graminicola IPO323   3 3
No Yes Zasmidium cellare ATCC 36951 v1.0   4 4
No Yes Dothistroma septosporum   2 2
No Yes Septoria musiva v1.0   4 4
No Yes Mycosphaerella fijiensis CIRAD86   3 3
No Yes Aureobasidium pullulans var. subglaciale EXF-2481 v1.0   2 2
No Yes Paracoccidioides brasiliensis Pb18   1 1
No Yes Coccidioides posadasii RMSCC 3488   1 1
No Yes Coccidioides immitis RS   1 1
No Yes Ajellomyces dermatitidis SLH14081   1 1
No Yes Histoplasma capsulatum class NAmI strain WU24   1 1
No Yes Microsporum canis CBS 113480   1 1
No Yes Trichophyton equinum CBS 127.97   1 1
No Yes Trichophyton verrucosum HKI 0517   1 1
No Yes Arthroderma benhamiae CBS 112371   1 1
No Yes Trichophyton tonsurans CBS 112818   1 1
No Yes Trichophyton rubrum CBS 118892   1 1
No Yes Uncinocarpus reesii 1704   1 1
No Yes Aspergillus zonatus v1.0   1 1
No Yes Penicillium chrysogenum Wisconsin 54-1255   1 1
No Yes Penicillium chrysogenum v1.0   1 1
No Yes Aspergillus acidus v1.0   1 1
No Yes Aspergillus fumigatus Af293   1 1
No Yes Aspergillus brasiliensis v1.0   1 1
No Yes Aspergillus nidulans FGSC A4   1 1
No Yes Aspergillus sydowii v1.0   1 1
No Yes Aspergillus versicolor v1.0   1 1
No Yes Aspergillus glaucus   1 1
No Yes Aspergillus carbonarius ITEM 5010   1 1
No Yes Neosartorya fischeri NRRL 181   1 1
No Yes Aspergillus terreus NIH2624   1 1
No Yes Aspergillus tubingensis v1.0   1 1
No Yes Aspergillus wentii v1.0   1 1
No Yes Aspergillus oryzae RIB40   1 1
No Yes Aspergillus niger 22   1 1
No Yes Aspergillus niger ATCC 1015   1 1
No Yes Aspergillus flavus NRRL3357   1 1
No Yes Aspergillus clavatus NRRL 1   1 1
No Yes Penicillium marneffei ATCC 18224   1 1
No Yes Tuber melanosporum Mel28 22   1 1
No Yes Tuber melanosporum Vittad Perigord truffle 1 1
No Yes Hansenula polymorpha v2.0   1 1
No Yes Dekkera bruxellensis CBS 2499 v2.0   1 1
No Yes Pichia membranifaciensv1.0   1 1
No Yes Candida tanzawaensis NRRL Y-17324 v1.0   1 1
No Yes Candida dubliniensis CD36   1 1
No Yes Candida tropicalis MYA-3404   1 1
No Yes Candida parapsilosis   1 1
No Yes Candida albicans SC5314   1 1
No Yes Lodderomyces elongisporus NRRL YB-4239   1 1
No Yes Babjeviella inositovora NRRL Y-12698 v1.0   1 1
No Yes Pichia stipitis CBS 6054   1 1
No Yes Candida guilliermondii ATCC 6260   1 1
No Yes Hyphopichia burtonii NRRL Y-1933 v1.0   1 1
No Yes Debaromyces hansenii   1 1
No Yes Wickerhamomyces anomalus   1 1
No Yes Pichia pastoris GS115   1 1
No Yes Yarrowia lipolytica CLIB122   1 1
No Yes Candida lusitaniae ATCC 42720   1 1
No Yes Metschnikowia bicuspidata NRRL YB-4993 v1.0   1 1
No Yes Kluyveromyces thermotolerans CBS 6340   1 1
No Yes Lachancea kluyveri   1 1
No Yes Ashbya gossypii ATCC 10895   1 1
No Yes Kluyveromyces lactis   1 1
No Yes Schizosaccharomyces cryophilus OY26 22   1 1
No Yes Schizosaccharomyces octosporus yFS286   1 1
No Yes Schizosaccharomyces japonicus yFS275   1 1
No Yes Schizosaccharomyces pombe Fission yeast 1 1
No Yes Spizellomyces punctatus DAOM BR117   1 1
No Yes Physcomitrella patens   1 1
No Yes Coccomyxa subellipsoidea sp. C-169 v2   1 1
No Yes Chlorella variabilis sp. NC64A   2 2
No Yes Chlorella vulgaris   1 1
No Yes Volvox carteri f. nagariensis   1 1
No Yes Volvox carteri v199   1 1
No Yes Chlamydomonas reinhardtii 4.0   1 1
No Yes Phaeodactylum tricornutumCCAP 1055/1   2 2
No Yes Fragilariopsis cylindrus   2 2
No Yes Thalassiosira pseudonana CCMP1335   1 1
No Yes Paramecium tetraurelia   2 2
No Yes Tetrahymena thermophila SB210 1   1 1
No Yes Ichthyophthirius multifiliis strain G5   1 1
No Yes Coriobacterium glomerans PW2   1 1
No Yes Kineococcus radiotolerans SRS30216   1 1
No Yes Streptomyces coelicolor A3(2)   1 1
No Yes Actinosynnema mirum DSM 43827   1 1
No Yes Kribbella flavida DSM 17836   1 1
No Yes Propionibacterium acnes SK137   1 1
No Yes Microlunatus phosphovorus NM-1   1 1
No Yes Beutenbergia cavernae DSM 12333   1 1
No Yes Leifsonia xyli subsp. xyli str. CTCB07   1 1
No Yes Brachybacterium faecium DSM 4810   1 1
No Yes Bifidobacterium longum subsp. longum JDM301   1 1
No Yes Bifidobacterium dentium Bd1   1 1
No Yes Bifidobacterium breve ACS-071-V-Sch8b   1 1
No Yes Deinococcus gobiensis I-0   1 1
No Yes Anaerococcus prevotii DSM 20548   1 1
No Yes Erysipelothrix rhusiopathiae str. Fujisawa   1 1
No Yes Clostridium phytofermentans ISDg   1 1
No Yes Candidatus Arthromitus sp. SFB-mouse-Japan   1 1
No Yes Clostridium perfringens ATCC 13124   1 1
No Yes Halanaerobium praevalens DSM 2228   1 1
No Yes Melissococcus plutonius DAT561   1 1
No Yes Enterococcus sp. 7L76   1 1
No Yes Enterococcus hirae ATCC 9790   1 1
No Yes Enterococcus faecium Aus0004   1 1
No Yes Enterococcus faecalis 62   1 1
No Yes Lactobacillus plantarum JDM1   1 1
No Yes Lactococcus garvieae ATCC 49156   1 1
No Yes Streptococcus sp. I-P16   1 1
No Yes Streptococcus sp. I-G2   1 1
No Yes Streptococcus intermedius JTH08   1 1
No Yes Streptococcus pseudopneumoniae IS7493   1 1
No Yes Streptococcus pasteurianus ATCC 43144   1 1
No Yes Streptococcus equi subsp. equi 4047   1 1
No Yes Streptococcus dysgalactiae subsp. equisimilis GGS_124   1 1
No Yes Streptococcus mitis B6   1 1
No Yes Streptococcus parauberis KCTC 11537   1 1
No Yes Streptococcus parasanguinis ATCC 15912   1 1
No Yes Streptococcus pyogenes str. Manfredo   1 1
No Yes Streptococcus pneumoniae P1031   1 1
No Yes Streptococcus suis P1/7   1 1
No Yes Streptococcus oralis Uo5   1 1
No Yes Streptococcus gordonii str. Challis substr. CH1   1 1
No Yes Paenibacillus sp. JDR-2   2 2
No Yes Paenibacillus terrae HPL-003   1 1
No Yes Listeria welshimeri serovar 6b str. SLCC5334   2 2
No Yes Listeria innocua Clip11262   2 2
No Yes Listeria seeligeri serovar 1/2b str. SLCC3954   2 2
No Yes Listeria monocytogenes serotype 4b str. CLIP 80459   2 2
No Yes Listeria ivanovii subsp. ivanovii PAM 55   2 2
No Yes Bacillus halodurans C-125   1 1
No Yes Melioribacter roseus P3M   1 1
No Yes Haliscomenobacter hydrossis DSM 1100   1 1
No Yes Niastella koreensis GR20-10   1 1
No Yes Chitinophaga pinensis DSM 2588   1 1
No Yes Fibrella aestuarina   1 1
No Yes Leadbetterella byssophila DSM 17132   1 1
No Yes Dyadobacter fermentans DSM 18053   1 1
No Yes Spirosoma linguale DSM 74   1 1
No Yes Runella slithyformis DSM 19594   1 1
No Yes Parabacteroides distasonis ATCC 8503   1 1
No Yes Tannerella forsythia ATCC 43037   1 1
No Yes Paludibacter propionicigenes WB4   1 1
No Yes Odoribacter splanchnicus DSM 20712   1 1
No Yes Prevotella melaninogenica ATCC 25845   1 1
No Yes Prevotella denticola F0289   1 1
No Yes Prevotella ruminicola 23   2 2
No Yes Alistipes finegoldii DSM 17242   1 1
No Yes Bacteroides helcogenes P 36-108   1 1
No Yes Bacteroides thetaiotaomicron VPI-5482   3 3
No Yes Bacteroides fragilis YCH46   2 2
No Yes Solitalea canadensis DSM 3403   1 1
No Yes Sphingobacterium sp. 21   1 1
No Yes Zunongwangia profunda SM-A87   1 1
No Yes Ornithobacterium rhinotracheale DSM 15997   1 1
No Yes Flavobacterium johnsoniae UW101   1 1
No Yes Phycisphaera mikurensis NBRC 102666   1 1
No Yes Granulicella tundricola MP5ACTX9   1 1
No Yes Granulicella mallensis MP5ACTX8   1 1
No Yes Candidatus Koribacter versatilis Ellin345   1 1
No Yes Terriglobus saanensis SP1PR4   1 1
No Yes Terriglobus roseus DSM 18391   1 1
No Yes Acidobacterium capsulatum ATCC 51196   1 1
No Yes Asticcacaulis excentricus CB 48   1 1
No Yes Novosphingobium aromaticivorans DSM 12444   1 1
No Yes Xanthomonas axonopodis pv. citri str. 306   1 1
No Yes Xanthomonas albilineans GPE PC73   1 1
No Yes Xanthomonas oryzae pv. oryzae PXO99A   1 1
No Yes Xanthomonas campestris pv. campestris str. B100   1 1
No Yes Paracoccidioides brasiliensis Pb01   1 1
No Yes Paracoccidioides brasiliensis Pb03   1 1
No Yes Coccidioides posadasii str. Silveira   1 1
No Yes Coccidioides immitis RMSCC 3703   1 1
No Yes Coccidioides immitis RMSCC 2394   1 1
No Yes Coccidioides immitis H538.4   1 1
No Yes Ajellomyces dermatitidis ER-3   1 1
No Yes Histoplasma capsulatum H143   1 1
No Yes Histoplasma capsulatum H88   1 1
No Yes Histoplasma capsulatum G186AR   1 1
No Yes Aspergillus fumigatus A1163   1 1
No Yes Candida albicans WO-1   1 1
No Yes Schizosaccharomyces pombe 972h-   1 1
No Yes Propionibacterium avidum 44067   1 1
No Yes Propionibacterium acnes ATCC 11828   1 1
No Yes Propionibacterium acnes TypeIA2 P.acn31   1 1
No Yes Propionibacterium acnes TypeIA2 P.acn17   1 1
No Yes Propionibacterium acnes TypeIA2 P.acn33   1 1
No Yes Propionibacterium acnes C1   1 1
No Yes Propionibacterium acnes HL096PA1   1 1
No Yes Propionibacterium acnes 6609   1 1
No Yes Propionibacterium acnes 266   1 1
No Yes Propionibacterium acnes KPA171202   1 1
No Yes Bifidobacterium longum NCC2705   1 1
No Yes Bifidobacterium longum DJO10A   1 1
No Yes Bifidobacterium longum subsp. infantis 157F   1 1
No Yes Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222   1 1
No Yes Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222   1 1
No Yes Bifidobacterium longum subsp. longum BBMN68   1 1
No Yes Bifidobacterium longum subsp. longum F8   1 1
No Yes Bifidobacterium breve UCC2003   1 1
No Yes Erysipelothrix rhusiopathiae SY1027   1 1
No Yes Roseburia intestinalis XB6B4   1 1
No Yes Candidatus Arthromitus sp. SFB-rat-Yit   1 1
No Yes Candidatus Arthromitus sp. SFB-mouse-Yit   1 1
No Yes Clostridium saccharoperbutylacetonicum N1-4(HMT)   1 1
No Yes Clostridium perfringens SM101   1 1
No Yes Clostridium perfringens str. 13   1 1
No Yes Carnobacterium maltaromaticum LMA28   2 2
No Yes Melissococcus plutonius ATCC 35311   1 1
No Yes Enterococcus mundtii QU 25   1 1
No Yes Enterococcus casseliflavus EC20   2 2
No Yes Enterococcus faecium Aus0085   1 1
No Yes Enterococcus faecium NRRL B-2354   1 1
No Yes Enterococcus faecium DO   2 2
No Yes Enterococcus faecalis str. Symbioflor 1   1 1
No Yes Enterococcus faecalis D32   1 1
No Yes Enterococcus faecalis OG1RF   1 1
No Yes Enterococcus faecalis V583   1 1
No Yes Lactobacillus paracasei subsp. paracasei 8700:2   1 1
No Yes Lactobacillus casei LOCK919   1 1
No Yes Lactobacillus casei W56   1 1
No Yes Lactobacillus casei LC2W   1 1
No Yes Lactobacillus casei BD-II   1 1
No Yes Lactobacillus casei BL23   1 1
No Yes Lactobacillus casei str. Zhang   1 1
No Yes Lactobacillus rhamnosus GG   1 1
No Yes Lactobacillus rhamnosus GG   1 1
No Yes Lactobacillus plantarum subsp. plantarum ST-III   1 1
No Yes Lactobacillus plantarum WCFS1   1 1
No Yes Lactococcus garvieae Lg2   1 1
No Yes Lactococcus lactis subsp. lactis KLDS 4.0325   1 1
No Yes Lactococcus lactis subsp. lactis IO-1   1 1
No Yes Lactococcus lactis subsp. lactis CV56   1 1
No Yes Lactococcus lactis subsp. lactis KF147   1 1
No Yes Lactococcus lactis subsp. lactis Il1403   1 1
No Yes Lactococcus lactis subsp. cremoris KW2   1 1
No Yes Streptococcus intermedius B196   1 1
No Yes Streptococcus intermedius C270   1 1
No Yes Streptococcus equi subsp. zooepidemicus ATCC 35246   1 1
No Yes Streptococcus equi subsp. zooepidemicus MGCS10565   1 1
No Yes Streptococcus equi subsp. zooepidemicus   1 1
No Yes Streptococcus dysgalactiae subsp. equisimilis 167   1 1
No Yes Streptococcus dysgalactiae subsp. equisimilis AC-2713   1 1
No Yes Streptococcus dysgalactiae subsp. equisimilis ATCC 12394   1 1
No Yes Streptococcus dysgalactiae subsp. equisimilis RE378   1 1
No Yes Streptococcus oligofermentans AS 1.3089   1 1
No Yes Streptococcus iniae SF1   1 1
No Yes Streptococcus parasanguinis FW213   1 1
No Yes Streptococcus pyogenes HSC5   1 1
No Yes Streptococcus pyogenes A20   1 1
No Yes Streptococcus pyogenes MGAS1882   1 1
No Yes Streptococcus pyogenes MGAS15252   1 1
No Yes Streptococcus pyogenes Alab49   1 1
No Yes Streptococcus pyogenes MGAS10750   1 1
No Yes Streptococcus pyogenes MGAS10270   1 1
No Yes Streptococcus pyogenes MGAS2096   1 1
No Yes Streptococcus pyogenes MGAS9429   1 1
No Yes Streptococcus pyogenes MGAS6180   1 1
No Yes Streptococcus pyogenes NZ131   1 1
No Yes Streptococcus pyogenes MGAS8232   1 1
No Yes Streptococcus pyogenes MGAS10394   1 1
No Yes Streptococcus pyogenes MGAS315   1 1
No Yes Streptococcus pyogenes SSI-1   1 1
No Yes Streptococcus pyogenes M1 476   1 1
No Yes Streptococcus pyogenes MGAS5005   1 1
No Yes Streptococcus pyogenes M1 GAS   1 1
No Yes Streptococcus pneumoniae A026   1 1
No Yes Streptococcus pneumoniae ST556   1 1
No Yes Streptococcus pneumoniae SPNA45   1 1
No Yes Streptococcus pneumoniae SPN994039   1 1
No Yes Streptococcus pneumoniae SPN994038   1 1
No Yes Streptococcus pneumoniae SPN034183   1 1
No Yes Streptococcus pneumoniae SPN034156   1 1
No Yes Streptococcus pneumoniae INV104   1 1
No Yes Streptococcus pneumoniae INV200   1 1
No Yes Streptococcus pneumoniae OXC141   1 1
No Yes Streptococcus pneumoniae gamPNI0373   1 1
No Yes Streptococcus pneumoniae AP200   1 1
No Yes Streptococcus pneumoniae ATCC 700669   1 1
No Yes Streptococcus pneumoniae TCH8431/19A   1 1
No Yes Streptococcus pneumoniae CGSP14   1 1
No Yes Streptococcus pneumoniae G54   1 1
No Yes Streptococcus pneumoniae JJA   1 1
No Yes Streptococcus pneumoniae 70585   1 1
No Yes Streptococcus pneumoniae Hungary19A-6   1 1
No Yes Streptococcus pneumoniae Taiwan19F-14   1 1
No Yes Streptococcus pneumoniae D39   1 1
No Yes Streptococcus pneumoniae 670-6B   1 1
No Yes Streptococcus pneumoniae R6   1 1
No Yes Streptococcus pneumoniae TIGR4   1 1
No Yes Streptococcus suis T15   1 1
No Yes Streptococcus suis TL13   1 1
No Yes Streptococcus suis SC070731   1 1
No Yes Streptococcus suis S735   1 1
No Yes Streptococcus suis SS12   1 1
No Yes Streptococcus suis D12   1 1
No Yes Streptococcus suis ST1   1 1
No Yes Streptococcus suis A7   1 1
No Yes Streptococcus suis JS14   1 1
No Yes Streptococcus suis BM407   1 1
No Yes Streptococcus suis SC84   1 1
No Yes Streptococcus suis GZ1   1 1
No Yes Streptococcus suis 98HAH33   1 1
No Yes Streptococcus suis 05ZYH33   1 1
No Yes Thermobacillus composti KWC4   1 1
No Yes Paenibacillus sp. Y412MC10   3 3
No Yes Paenibacillus larvae subsp. larvae DSM 25430   1 1
No Yes Listeria monocytogenes EGD sequence   2 2
No Yes Listeria monocytogenes N53-1   2 2
No Yes Listeria monocytogenes La111   2 2
No Yes Listeria monocytogenes serotype 4b str. LL195   1 1
No Yes Listeria monocytogenes 07PF0776   1 1
No Yes Listeria monocytogenes M7   1 1
No Yes Listeria monocytogenes J1-220   1 1
No Yes Listeria monocytogenes J1816   2 2
No Yes Listeria monocytogenes SLCC2376   2 2
No Yes Listeria monocytogenes SLCC5850   2 2
No Yes Listeria monocytogenes ATCC 19117   1 1
No Yes Listeria monocytogenes L312   2 2
No Yes Listeria monocytogenes SLCC2479   2 2
No Yes Listeria monocytogenes SLCC7179   2 2
No Yes Listeria monocytogenes SLCC2540   2 2
No Yes Listeria monocytogenes SLCC2378   1 1
No Yes Listeria monocytogenes serotype 1/2b str. SLCC2755   2 2
No Yes Listeria monocytogenes serotype 1/2c str. SLCC2372   2 2
No Yes Listeria monocytogenes serotype 7 str. SLCC2482   2 2
No Yes Listeria monocytogenes 08-5578   2 2
No Yes Listeria monocytogenes 08-5923   2 2
No Yes Listeria monocytogenes L99   1 1
No Yes Listeria monocytogenes HCC23   1 1
No Yes Listeria monocytogenes 10403S   2 2
No Yes Listeria monocytogenes J0161   2 2
No Yes Listeria monocytogenes Finland 1998   2 2
No Yes Listeria monocytogenes FSL R2-561   2 2
No Yes Listeria monocytogenes serotype 4b str. F2365   1 1
No Yes Listeria monocytogenes EGD-e   2 2
No Yes Echinicola vietnamensis DSM 17526   1 1
No Yes Emticicia oligotrophica DSM 17448   1 1
No Yes Prevotella sp. oral taxon 299 str. F0039   1 1
No Yes Prevotella dentalis DSM 3688   1 1
No Yes Bacteroides xylanisolvens XB1A   3 3
No Yes Bacteroides fragilis 638R   2 2
No Yes Bacteroides fragilis NCTC 9343   1 1
No Yes Simiduia agarivorans SA1 = DSM 21679   1 1
No Yes Xylella fastidiosa 9a5c   1 1
No Yes Xanthomonas citri subsp. citri Aw12879   1 1
No Yes Xanthomonas campestris pv. vesicatoria str. 85-10   1 1
No Yes Xanthomonas axonopodis pv. citrumelo F1   1 1
No Yes Xanthomonas axonopodis Xac29-1   1 1
No Yes Xanthomonas oryzae pv. oryzicola BLS256   1 1
No Yes Xanthomonas oryzae pv. oryzae MAFF 311018   1 1
No Yes Xanthomonas oryzae pv. oryzae KACC 10331   1 1
No Yes Xanthomonas campestris pv. raphani 756C   1 1
No Yes Xanthomonas campestris pv. campestris str. 8004   1 1
No Yes Xanthomonas campestris pv. campestris str. ATCC 33913   1 1
No Yes 2_050719S (meta-genome)   1 1
No Yes Air microbial communities Singapore indoor air filters 1 (meta-genome)   1 1
No Yes Air microbial communities Singapore indoor air filters 2 (meta-genome)   6 6
No Yes Combined (meta-genome)   3 3
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   4 4
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)   4 4
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   1 1
No Yes Dump bottom (Dump bottom) (meta-genome)   15 15
No Yes Dump top (Dump top) (meta-genome)   9 9
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #3 (meta-genome)   1 1
No Yes Fungus garden combined (combined) (meta-genome)   1 1
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   1 1
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   7 7
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome)   1 1
No Yes Human Gut Community Subject 8 (meta-genome)   2 2
No Yes Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)   2 2
No Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   3 3
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)   1 1
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   1 1
No Yes Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome)   2 2
No Yes Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome)   1 1
No Yes Mouse Gut Community lean3 (meta-genome)   1 1
No Yes NCBI 2017_08 genome   18128 18126
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   3 3
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   3 3
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   2 2
No Yes Sludge/US, Jazz Assembly (meta-genome)   1 1
No Yes Sludge/US, Phrap Assembly (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   3 3
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   1 1
No Yes Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   145 145
No Yes Termite Protist Endosymbiont Community (meta-genome)   1 1
No Yes Uniprot 2018_03 genome   3845 3844
No Yes Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)   1 1
No Yes Global Ocean Sampling Expedition (GOS)   34 34
No Yes NCBI plasmid sequences (Plasmids)   4 4
No Yes PDB chains (SCOP 1.75) (PDB)   2 2
No Yes Protein Data Bank (all PDB sequenc)   11 11
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   49 49
No Yes TargetDB (Targets)   37 37

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