SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.


NEAT domain-like superfamily domain assignments
in
Bacillus weihenstephanensis KBAB4

Assignment details

(show help)


Bacillus weihenstephanensis KBAB4 has 11 significant domains in 6 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|163938477|ref|YP_001643361.1|   2.88e-29   46-161   NEAT domain  
gi|163939006|ref|YP_001643890.1|   3.53e-32   46-165   NEAT domain  
gi|163939236|ref|YP_001644120.1|   4.97e-31   43-161   NEAT domain  
gi|163942278|ref|YP_001647162.1|   3.01e-49   16-160   NEAT domain  
  2.75e-48   928-1063   NEAT domain  
  3.4e-47   552-688   NEAT domain  
  4.32e-47   731-865   NEAT domain  
  8.11e-43   325-461   NEAT domain  
  9.55e-43   185-323   NEAT domain  
gi|163942279|ref|YP_001647163.1|   1.24e-42   25-152   NEAT domain  
gi|163942280|ref|YP_001647164.1|   4.32e-43   18-155   NEAT domain  

Jump to [ Top of page · Assignment details · Add assignments from individual genomes ]


Add assignments from groups of genomes

View all assignments containing a NEAT domain-like domain in each group of genomes.

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes ]


Add assignments from individual genomes

Select additional genomes you would like to see domain assignments for, then click 'Submit'.

Select to display   Genome       Domains   Proteins
No Yes ALL   83174 83174
No Yes Aspergillus zonatus v1.0   7 4
No Yes Ruminococcus sp.   1 1
No Yes Syntrophobotulus glycolicus DSM 8271   11 5
No Yes [Ruminococcus] obeum   1 1
No Yes [Ruminococcus] torques   1 1
No Yes Eubacterium rectale M104/1   1 1
No Yes Roseburia intestinalis   1 1
No Yes Clostridium novyi NT   8 4
No Yes Clostridium tetani E88   8 2
No Yes Clostridium perfringens ATCC 13124   5 2
No Yes Leuconostoc kimchii IMSNU 11154   3 2
No Yes Lactobacillus crispatus ST1   1 1
No Yes Lactobacillus fermentum IFO 3956   4 2
No Yes Lactobacillus buchneri NRRL B-30929   3 2
No Yes Lactobacillus buchneri   3 2
No Yes Lactobacillus brevis ATCC 367   4 3
No Yes Streptococcus dysgalactiae subsp. equisimilis GGS_124   1 1
No Yes Streptococcus pyogenes str. Manfredo   1 1
No Yes Paenibacillus sp. JDR-2   6 4
No Yes Paenibacillus terrae HPL-003   11 4
No Yes Paenibacillus polymyxa M1   13 4
No Yes Listeria welshimeri serovar 6b str. SLCC5334   4 2
No Yes Listeria innocua Clip11262   4 2
No Yes Listeria seeligeri serovar 1/2b str. SLCC3954   4 2
No Yes Listeria monocytogenes serotype 4b str. CLIP 80459   4 2
No Yes Listeria ivanovii subsp. ivanovii PAM 55   4 2
No Yes Solibacillus silvestris StLB046   3 2
No Yes Lysinibacillus sphaericus C3-41   5 3
No Yes Bacillus halodurans C-125   6 2
No Yes Bacillus weihenstephanensis KBAB4   11 6
No Yes Bacillus thuringiensis str. Al Hakam   9 5
No Yes Bacillus cereus 03BB102   8 4
No Yes Bacillus anthracis str. A0248   8 4
No Yes Bacillus clausii KSM-K16   5 2
No Yes Staphylococcus lugdunensis HKU09-01   12 8
No Yes Staphylococcus aureus subsp. aureus JH1   7 4
No Yes Staphylococcus aureus   7 4
No Yes Roseburia intestinalis XB6B4   1 1
No Yes Clostridium tetani genome 12124569   8 2
No Yes Clostridium perfringens SM101   5 2
No Yes Clostridium perfringens str. 13   5 2
No Yes Clostridium botulinum BKT015925   13 5
No Yes Clostridium botulinum E3 str. Alaska E43   6 1
No Yes Carnobacterium maltaromaticum LMA28   5 2
No Yes Lactobacillus fermentum F-6   4 2
No Yes Lactobacillus fermentum CECT 5716   3 1
No Yes Lactobacillus brevis KB290   4 3
No Yes Streptococcus equi subsp. zooepidemicus ATCC 35246   2 1
No Yes Streptococcus equi subsp. zooepidemicus MGCS10565   1 1
No Yes Streptococcus equi subsp. zooepidemicus   2 1
No Yes Streptococcus dysgalactiae subsp. equisimilis 167   1 1
No Yes Streptococcus dysgalactiae subsp. equisimilis AC-2713   1 1
No Yes Streptococcus dysgalactiae subsp. equisimilis RE378   1 1
No Yes Streptococcus iniae SF1   2 1
No Yes Streptococcus pyogenes HSC5   1 1
No Yes Streptococcus pyogenes A20   1 1
No Yes Streptococcus pyogenes MGAS1882   1 1
No Yes Streptococcus pyogenes MGAS15252   1 1
No Yes Streptococcus pyogenes Alab49   1 1
No Yes Streptococcus pyogenes MGAS10750   1 1
No Yes Streptococcus pyogenes MGAS10270   2 1
No Yes Streptococcus pyogenes MGAS2096   1 1
No Yes Streptococcus pyogenes MGAS9429   1 1
No Yes Streptococcus pyogenes MGAS6180   1 1
No Yes Streptococcus pyogenes NZ131   1 1
No Yes Streptococcus pyogenes MGAS8232   2 1
No Yes Streptococcus pyogenes MGAS10394   2 1
No Yes Streptococcus pyogenes MGAS315   1 1
No Yes Streptococcus pyogenes SSI-1   1 1
No Yes Streptococcus pyogenes M1 476   1 1
No Yes Streptococcus pyogenes MGAS5005   1 1
No Yes Streptococcus pyogenes M1 GAS   1 1
No Yes Paenibacillus polymyxa CR1   3 3
No Yes Paenibacillus polymyxa SC2   13 4
No Yes Paenibacillus polymyxa E681   10 4
No Yes Listeria monocytogenes EGD sequence   4 2
No Yes Listeria monocytogenes N53-1   4 2
No Yes Listeria monocytogenes La111   4 2
No Yes Listeria monocytogenes serotype 4b str. LL195   4 2
No Yes Listeria monocytogenes 07PF0776   4 2
No Yes Listeria monocytogenes M7   4 2
No Yes Listeria monocytogenes J1-220   4 2
No Yes Listeria monocytogenes J1816   4 2
No Yes Listeria monocytogenes SLCC2376   4 2
No Yes Listeria monocytogenes SLCC5850   4 2
No Yes Listeria monocytogenes ATCC 19117   4 2
No Yes Listeria monocytogenes L312   4 2
No Yes Listeria monocytogenes SLCC2479   4 2
No Yes Listeria monocytogenes SLCC7179   4 2
No Yes Listeria monocytogenes SLCC2540   4 2
No Yes Listeria monocytogenes SLCC2378   4 2
No Yes Listeria monocytogenes serotype 1/2b str. SLCC2755   4 2
No Yes Listeria monocytogenes serotype 1/2c str. SLCC2372   4 2
No Yes Listeria monocytogenes serotype 7 str. SLCC2482   4 2
No Yes Listeria monocytogenes 08-5578   4 2
No Yes Listeria monocytogenes 08-5923   4 2
No Yes Listeria monocytogenes L99   4 2
No Yes Listeria monocytogenes HCC23   4 2
No Yes Listeria monocytogenes 10403S   4 2
No Yes Listeria monocytogenes J0161   4 2
No Yes Listeria monocytogenes Finland 1998   4 2
No Yes Listeria monocytogenes FSL R2-561   4 2
No Yes Listeria monocytogenes serotype 4b str. F2365   4 2
No Yes Listeria monocytogenes EGD-e   4 2
No Yes Bacillus toyonensis BCT-7112   9 5
No Yes Bacillus thuringiensis HD-771   9 5
No Yes Bacillus thuringiensis HD-789   9 5
No Yes Bacillus thuringiensis MC28   9 5
No Yes Bacillus thuringiensis serovar chinensis CT-43   9 5
No Yes Bacillus thuringiensis YBT-1518   9 5
No Yes Bacillus thuringiensis Bt407   9 6
No Yes Bacillus thuringiensis serovar konkukian str. 97-27   9 5
No Yes Bacillus thuringiensis serovar kurstaki str. HD73   8 5
No Yes Bacillus thuringiensis BMB171   9 5
No Yes Bacillus thuringiensis serovar finitimus YBT-020   10 5
No Yes Bacillus thuringiensis serovar thuringiensis str. IS5056   9 5
No Yes Bacillus cereus FRI-35   9 5
No Yes Bacillus cereus biovar anthracis str. CI   11 7
No Yes Bacillus cereus AH820   9 5
No Yes Bacillus cereus AH187   9 5
No Yes Bacillus cereus B4264   9 5
No Yes Bacillus cereus G9842   9 5
No Yes Bacillus cereus Q1   9 5
No Yes Bacillus cereus F837/76   9 5
No Yes Bacillus cereus NC7401   9 5
No Yes Bacillus cereus E33L   9 5
No Yes Bacillus cereus ATCC 14579   8 4
No Yes Bacillus cereus ATCC 10987   9 5
No Yes Bacillus anthracis str. H9401   12 8
No Yes Bacillus anthracis str. CDC 684   12 8
No Yes Bacillus anthracis str. 'Ames Ancestor'   10 6
No Yes Bacillus anthracis str. Sterne   9 5
No Yes Bacillus anthracis str. Ames   9 5
No Yes Staphylococcus aureus subsp. aureus MSHR1132   7 4
No Yes Staphylococcus lugdunensis N920143   6 4
No Yes Staphylococcus aureus CA-347   7 4
No Yes Staphylococcus aureus Bmb9393   7 4
No Yes Staphylococcus aureus M1   7 4
No Yes Staphylococcus aureus 08BA02176   7 4
No Yes Staphylococcus aureus ST228/18412   7 4
No Yes Staphylococcus aureus ST228/18341   7 4
No Yes Staphylococcus aureus ST228/16125   7 4
No Yes Staphylococcus aureus ST228/16035   7 4
No Yes Staphylococcus aureus ST228/15532   7 4
No Yes Staphylococcus aureus ST228/10497   7 4
No Yes Staphylococcus aureus ST228/10388   7 4
No Yes Staphylococcus aureus 04-02981   7 4
No Yes Staphylococcus aureus RF122   7 5
No Yes Staphylococcus aureus subsp. aureus Z172   7 4
No Yes Staphylococcus aureus subsp. aureus 6850   7 4
No Yes Staphylococcus aureus subsp. aureus SA957   7 4
No Yes Staphylococcus aureus subsp. aureus CN1   7 4
No Yes Staphylococcus aureus subsp. aureus SA40   7 4
No Yes Staphylococcus aureus subsp. aureus 11819-97   7 4
No Yes Staphylococcus aureus subsp. aureus M013   7 4
No Yes Staphylococcus aureus subsp. aureus HO 5096 0412   5 3
No Yes Staphylococcus aureus subsp. aureus VC40   7 4
No Yes Staphylococcus aureus subsp. aureus T0131   7 4
No Yes Staphylococcus aureus subsp. aureus LGA251   7 4
No Yes Staphylococcus aureus subsp. aureus ECT-R 2   7 4
No Yes Staphylococcus aureus subsp. aureus JKD6159   7 4
No Yes Staphylococcus aureus subsp. aureus ED133   7 4
No Yes Staphylococcus aureus subsp. aureus ED98   7 4
No Yes Staphylococcus aureus subsp. aureus TW20   7 4
No Yes Staphylococcus aureus subsp. aureus 55/2053   7 4
No Yes Staphylococcus aureus subsp. aureus TCH60   7 4
No Yes Staphylococcus aureus subsp. aureus str. JKD6008   7 4
No Yes Staphylococcus aureus subsp. aureus 71193   7 4
No Yes Staphylococcus aureus subsp. aureus S0385   7 4
No Yes Staphylococcus aureus subsp. aureus str. Newman   7 4
No Yes Staphylococcus aureus subsp. aureus Mu3   7 4
No Yes Staphylococcus aureus subsp. aureus USA300_TCH1516   5 3
No Yes Staphylococcus aureus subsp. aureus USA300_FPR3757   7 4
No Yes Staphylococcus aureus subsp. aureus JH9   7 4
No Yes Staphylococcus aureus subsp. aureus MSSA476   7 4
No Yes Staphylococcus aureus subsp. aureus MRSA252   4 3
No Yes Staphylococcus aureus subsp. aureus MW2   7 4
No Yes Staphylococcus aureus subsp. aureus N315   7 4
No Yes Staphylococcus aureus subsp. aureus Mu50   7 4
No Yes Staphylococcus aureus subsp. aureus COL   7 4
No Yes Staphylococcus aureus subsp. aureus NCTC 8325   7 4
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   1 1
No Yes Dump top (Dump top) (meta-genome)   6 6
No Yes Fungus garden combined (combined) (meta-genome)   5 4
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   2 2
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   2 2
No Yes Human Gut Community Subject 8 (meta-genome)   5 5
No Yes NCBI 2017_08 genome   74238 42390
No Yes STRING v9.0.5 (STRING)   369 205
No Yes Uniprot 2018_03 genome   6870 3853
No Yes NCBI plasmid sequences (Plasmids)   9 8
No Yes PDB chains (SCOP 1.75) (PDB)   4 4
No Yes Protein Data Bank (all PDB sequenc)   92 85
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   155 155
No Yes TargetDB (Targets)   38 27

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]