SUPERFAMILY 1.75 HMM library and genome assignments server

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BT2961-like family domain assignments


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Select to display   Genome       Domains   Proteins
No Yes ALL   710 710
No Yes Lactobacillus sakei subsp. sakei 23K   1 1
No Yes Lactobacillus plantarum JDM1   1 1
No Yes Prevotella ruminicola 23   1 1
No Yes Bacteroides salanitronis DSM 18170   1 1
No Yes Bacteroides vulgatus ATCC 8482   1 1
No Yes Bacteroides thetaiotaomicron VPI-5482   1 1
No Yes Pedobacter saltans DSM 12145   1 1
No Yes Lactobacillus plantarum 16   1 1
No Yes Lactobacillus plantarum ZJ316   1 1
No Yes Lactobacillus plantarum subsp. plantarum ST-III   1 1
No Yes Lactobacillus plantarum subsp. plantarum P-8   1 1
No Yes Lactobacillus plantarum WCFS1   1 1
No Yes Bacteroides xylanisolvens XB1A   1 1
No Yes Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)   1 1
No Yes NCBI 2017_08 genome   418 418
No Yes STRING v9.0.5 (STRING)   5 5
No Yes Uniprot 2018_03 genome   217 217
No Yes PDB chains (SCOP 1.75) (PDB)   2 2
No Yes Protein Data Bank (all PDB sequenc)   9 9
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   27 27
No Yes TargetDB (Targets)   9 9

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]