SUPERFAMILY 1.75 HMM library and genome assignments server

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BaiE/LinA-like family domain assignments
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all archaeal genomes


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Select to display   Genome       Domains   Proteins
No Yes ALL   354 354
No Yes Anabaena variabilis ATCC 29413   1 1
No Yes Nostoc punctiforme PCC 73102   1 1
No Yes Thermomonospora curvata DSM 43183   1 1
No Yes Rhodococcus jostii RHA1   1 1
No Yes Burkholderia xenovorans LB400   1 1
No Yes Caulobacter sp. K31   1 1
No Yes Novosphingobium sp. PP1Y   2 2
No Yes Novosphingobium aromaticivorans DSM 12444   4 4
No Yes Oscillatoria nigro-viridis PCC 7112   1 1
No Yes NCBI 2017_08 genome   145 145
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   2 2
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   10 10
No Yes Uniprot 2018_03 genome   110 110
No Yes Global Ocean Sampling Expedition (GOS)   1 1
No Yes NCBI plasmid sequences (Plasmids)   5 5
No Yes PDB chains (SCOP 1.75) (PDB)   5 5
No Yes Protein Data Bank (all PDB sequenc)   11 11
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   33 33
No Yes TargetDB (Targets)   7 7

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]