SUPERFAMILY 1.75 HMM library and genome assignments server

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NosL/MerB-like superfamily domain assignments
in
all genomes

Assignment details

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25 selected genomes have 33 significant domains in 33 proteins.

Showing genomes 1 to 25 of 590
  1 2 3 4 5 6 7 8 9 10 11   Next Last

Adineta vaga has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
GSADVT00046656001   8.63e-23   72-199   MerB-like  
GSADVT00066691001   8.89e-23   72-199   MerB-like  

Nectria haematococca mpVI has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
jgi|Necha2|87140|fgenesh1_pg.sca_40_chr12_1_0000085   3.4e-25   52-179   MerB-like  

Trichoderma asperellum CBS 433.97 v1.0 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
jgi|Trias1|145208|e_gw1.10.534.1   6.02e-21   70-197   MerB-like  

Trichoderma virens Gv29-8 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
jgi|Trive1|32960|e_gw1.3.1839.1   1.54e-21   70-199   MerB-like  

Trichoderma harzianum CBS 226.95 v1.0 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
jgi|Triha1|508042|fgenesh1_kg.6_#_191_#_Locus16226v1rpkm0.30   3.92e-21   70-198   MerB-like  

Amorphotheca resinae v1.0 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
jgi|Amore1|34924|fgenesh1_kg.6_#_19_#_Locus69122v1rpkm0.63   1.54e-26   100-221   MerB-like  
 
Weak hits:
jgi|Amore1|107908|e_gw1.11.299.1   0.0994   158-181   NosL-like  

Trichophyton rubrum CBS 118892 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
TERG_01637T0   0.00000173   133-200   MerB-like  

Aspergillus carbonarius ITEM 5010 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
jgi|Aspca1|34901|fgenesh1_pg.00855_#_36   1.46e-17   76-207   MerB-like  

Aspergillus terreus NIH2624 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
ATET_08479   3.14e-27   97-224   MerB-like  
 
Weak hits:
ATET_10293   0.0251   279-315   MerB-like  

Medicago truncatula has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
Medtr0644s0030.1   1.86e-38   831-952   MerB-like  
 
Weak hits:
Medtr4g097160.1   0.0706   94-119   NosL-like  

Thermobaculum terrenum ATCC BAA-798 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|269839120|ref|YP_003323812.1|   9.42e-25   16-130   MerB-like  

Rubrobacter xylanophilus DSM 9941 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|108804602|ref|YP_644539.1|   1.44e-27   56-175   MerB-like  
gi|108804603|ref|YP_644540.1|   5.49e-28   55-175   MerB-like  

Ilumatobacter coccineus has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|470176652|ref|YP_007562696.1|   0.000000000000154   75-129   MerB-like  

Catenulispora acidiphila DSM 44928 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|256392967|ref|YP_003114531.1|   0.0000068   377-471   NosL-like  

Stackebrandtia nassauensis DSM 44728 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|291302821|ref|YP_003514099.1|   1.52e-37   86-212   MerB-like  
gi|291302822|ref|YP_003514100.1|   1.15e-33   82-211   MerB-like  

Streptosporangium roseum DSM 43021 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|271966309|ref|YP_003340505.1|   2.14e-30   84-204   MerB-like  

Streptomyces bingchenggensis BCW-1 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|374992401|ref|YP_004967896.1|   0.0000018   9-68   MerB-like  

Streptomyces violaceusniger Tu 4113 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|345008485|ref|YP_004810839.1|   0.00000233   363-450   NosL-like  

Streptomyces avermitilis MA-4680 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|29831398|ref|NP_826032.1|   0.000000994   369-444   NosL-like  

Streptomyces scabiei 87.22 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|290958241|ref|YP_003489423.1|   0.000000133   371-450   NosL-like  
 
Weak hits:
gi|290957482|ref|YP_003488664.1|   0.0497   7-62   MerB-like  

Pseudonocardia dioxanivorans CB1190 has 4 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|331694897|ref|YP_004331136.1|   2.25e-16   97-211   MerB-like  
gi|331695170|ref|YP_004331409.1|   2.54e-26   92-219   MerB-like  
gi|331695171|ref|YP_004331410.1|   5.49e-36   86-208   MerB-like  
gi|331699701|ref|YP_004335940.1|   0.00000000133   398-476   NosL-like  

Amycolatopsis mediterranei U32 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|300784233|ref|YP_003764524.1|   8.63e-17   84-201   MerB-like  
gi|300784606|ref|YP_003764897.1|   0.000000000000209   90-189   MerB-like  

Kribbella flavida DSM 17836 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|284028820|ref|YP_003378751.1|   9.68e-34   193-320   MerB-like  

Nocardioides sp. JS614 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|119714242|ref|YP_919384.1|   6.02e-29   100-223   MerB-like  
gi|119716426|ref|YP_923391.1|   1.7e-35   193-315   MerB-like  

Microlunatus phosphovorus NM-1 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|336116160|ref|YP_004570926.1|   7.06e-29   100-220   MerB-like  

  1 2 3 4 5 6 7 8 9 10 11   Next Last
Showing genomes 1 to 25 of 590

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Select to display   Genome       Domains   Proteins
No Yes ALL   29349 29349
No Yes Adineta vaga   2 2
No Yes Nectria haematococca mpVI   1 1
No Yes Trichoderma asperellum CBS 433.97 v1.0   1 1
No Yes Trichoderma virens Gv29-8   1 1
No Yes Trichoderma harzianum CBS 226.95 v1.0   1 1
No Yes Amorphotheca resinae v1.0 Creosote fungus 1 1
No Yes Trichophyton rubrum CBS 118892   1 1
No Yes Aspergillus carbonarius ITEM 5010   1 1
No Yes Aspergillus terreus NIH2624   1 1
No Yes Medicago truncatula Barrel medic 1 1
No Yes Thermobaculum terrenum ATCC BAA-798   1 1
No Yes Rubrobacter xylanophilus DSM 9941   2 2
No Yes Ilumatobacter coccineus   1 1
No Yes Catenulispora acidiphila DSM 44928   1 1
No Yes Stackebrandtia nassauensis DSM 44728   2 2
No Yes Streptosporangium roseum DSM 43021   1 1
No Yes Streptomyces bingchenggensis BCW-1   1 1
No Yes Streptomyces violaceusniger Tu 4113   1 1
No Yes Streptomyces avermitilis MA-4680   1 1
No Yes Streptomyces scabiei 87.22   1 1
No Yes Pseudonocardia dioxanivorans CB1190   4 4
No Yes Amycolatopsis mediterranei U32   2 2
No Yes Kribbella flavida DSM 17836   1 1
No Yes Nocardioides sp. JS614   2 2
No Yes Microlunatus phosphovorus NM-1   1 1
No Yes Gordonia bronchialis DSM 43247   1 1
No Yes Rhodococcus opacus B4   1 1
No Yes Nocardia farcinica IFM 10152   2 2
No Yes Mycobacterium abscessus ATCC 19977   2 2
No Yes Mycobacterium avium 104   1 1
No Yes Mycobacterium rhodesiae NBB3   1 1
No Yes Mycobacterium gilvum PYR-GCK   1 1
No Yes Mycobacterium chubuense NBB4   3 3
No Yes Mycobacterium marinum M   1 1
No Yes Mycobacterium smegmatis str. MC2 155   1 1
No Yes Corynebacterium ulcerans 0102   1 1
No Yes Kytococcus sedentarius DSM 20547   1 1
No Yes Cellulomonas flavigena DSM 20109   1 1
No Yes [Cellvibrio] gilvus ATCC 13127   1 1
No Yes Arthrobacter chlorophenolicus A6   1 1
No Yes Caldilinea aerophila DSM 14535 = NBRC 104270   1 1
No Yes Thermomicrobium roseum DSM 5159   1 1
No Yes Sphaerobacter thermophilus DSM 20745   1 1
No Yes Oceanithermus profundus DSM 14977   2 2
No Yes Marinithermus hydrothermalis DSM 14884   1 1
No Yes Meiothermus silvanus DSM 9946   1 1
No Yes Thermus sp. CCB_US3_UF1   2 2
No Yes Thermus scotoductus SA-01   2 2
No Yes Erysipelothrix rhusiopathiae str. Fujisawa   1 1
No Yes Thermaerobacter marianensis DSM 12885   1 1
No Yes Desulfitobacterium hafniense Y51   1 1
No Yes Desulfitobacterium dehalogenans ATCC 51507   1 1
No Yes Desulfotomaculum ruminis DSM 2154   1 1
No Yes Clostridium difficile 630   1 1
No Yes Clostridium botulinum A str. ATCC 3502   1 1
No Yes Exiguobacterium sp. AT1b   1 1
No Yes Kyrpidia tusciae DSM 2912   2 2
No Yes Brevibacillus brevis NBRC 100599   1 1
No Yes Geobacillus thermoglucosidasius C56-YS93   1 1
No Yes Lysinibacillus sphaericus C3-41   2 2
No Yes Anoxybacillus flavithermus WK1   2 2
No Yes Geobacillus sp. WCH70   1 1
No Yes Bacillus sp. JS   1 1
No Yes Bacillus sp. 1NLA3E   1 1
No Yes Bacillus amyloliquefaciens FZB42   1 1
No Yes Bacillus atrophaeus 1942   1 1
No Yes Bacillus subtilis subsp. subtilis str. 168   1 1
No Yes Bacillus licheniformis DSM 13 = ATCC 14580   1 1
No Yes Bacillus weihenstephanensis KBAB4   2 2
No Yes Bacillus thuringiensis str. Al Hakam   1 1
No Yes Bacillus cereus 03BB102   1 1
No Yes Bacillus anthracis str. A0248   1 1
No Yes Staphylococcus pseudintermedius HKU10-03   1 1
No Yes Staphylococcus carnosus subsp. carnosus TM300   1 1
No Yes Gemmatimonas aurantiaca T-27   1 1
No Yes Melioribacter roseus P3M   1 1
No Yes Ignavibacterium album JCM 16511   1 1
No Yes Haliscomenobacter hydrossis DSM 1100   1 1
No Yes Niastella koreensis GR20-10   1 1
No Yes Rhodothermus marinus DSM 4252   1 1
No Yes Flexibacter litoralis DSM 6794   1 1
No Yes Belliella baltica DSM 15883   2 2
No Yes Marivirga tractuosa DSM 4126   1 1
No Yes Dyadobacter fermentans DSM 18053   1 1
No Yes Runella slithyformis DSM 19594   1 1
No Yes Prevotella denticola F0289   1 1
No Yes Pedobacter saltans DSM 12145   1 1
No Yes Solitalea canadensis DSM 3403   1 1
No Yes Owenweeksia hongkongensis DSM 17368   1 1
No Yes Zunongwangia profunda SM-A87   1 1
No Yes Gramella forsetii KT0803   1 1
No Yes Maribacter sp. HTCC2170   1 1
No Yes Robiginitalea biformata HTCC2501   1 1
No Yes Aequorivita sublithincola DSM 14238   1 1
No Yes Zobellia galactanivorans   1 1
No Yes Muricauda ruestringensis DSM 13258   1 1
No Yes Cellulophaga algicola DSM 14237   1 1
No Yes Flavobacteriaceae bacterium 3519-10   1 1
No Yes Riemerella anatipestifer ATCC 11845 = DSM 15868   1 1
No Yes Flavobacterium branchiophilum FL-15   1 1
No Yes Simkania negevensis Z   1 1
No Yes Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'   1 1
No Yes Brachyspira murdochii DSM 12563   1 1
No Yes Brachyspira pilosicoli 95/1000   1 1
No Yes Calditerrivibrio nitroreducens DSM 19672   2 1
No Yes Denitrovibrio acetiphilus DSM 12809   3 2
No Yes Sulfurihydrogenibium sp. YO3AOP1   3 3
No Yes Sulfurihydrogenibium azorense Az-Fu1   2 2
No Yes Persephonella marina EX-H1   2 2
No Yes Hydrogenobaculum sp. SN   2 2
No Yes Hydrogenobaculum sp. HO   2 2
No Yes Hydrogenobaculum sp. Y04AAS1   2 2
No Yes Thermocrinis albus DSM 14484   1 1
No Yes Aquifex aeolicus VF5   1 1
No Yes Hydrogenobacter thermophilus TK-6   3 3
No Yes Candidatus Chloracidobacterium thermophilum B   1 1
No Yes Candidatus Methylomirabilis oxyfera   2 2
No Yes Acidithiobacillus caldus SM-1   1 1
No Yes Nitratifractor salsuginis DSM 16511   5 5
No Yes Sulfurospirillum deleyianum DSM 6946   6 4
No Yes Sulfurospirillum barnesii SES-3   6 4
No Yes Arcobacter sp. L   3 2
No Yes Arcobacter butzleri RM4018   2 2
No Yes Campylobacter hominis ATCC BAA-381   2 1
No Yes Campylobacter concisus 13826   2 2
No Yes Campylobacter sp. 03-427   1 1
No Yes Campylobacter fetus subsp. fetus 82-40   1 1
No Yes Sulfurimonas autotrophica DSM 16294   5 5
No Yes Sulfurimonas denitrificans DSM 1251   9 8
No Yes Wolinella succinogenes DSM 1740   8 7
No Yes Nitratiruptor sp. SB155-2   2 2
No Yes Sulfurovum sp. NBC37-1   3 3
No Yes Desulfomonile tiedjei DSM 6799   7 6
No Yes Syntrophobacter fumaroxidans MPOB   3 3
No Yes Desulfurivibrio alkaliphilus AHT2   3 3
No Yes Desulfobacterium autotrophicum HRM2   3 2
No Yes Geobacter sp. M21   2 2
No Yes Geobacter lovleyi SZ   2 2
No Yes Geobacter bemidjiensis Bem   4 4
No Yes Geobacter sulfurreducens KN400   3 3
No Yes Sorangium cellulosum 'So ce 56'   1 1
No Yes Anaeromyxobacter sp. Fw109-5   1 1
No Yes Anaeromyxobacter dehalogenans 2CP-1   2 2
No Yes Dechloromonas aromatica RCB   4 4
No Yes Thauera sp. MZ1T   4 4
No Yes Azoarcus sp. KH32C   1 1
No Yes Azoarcus sp. BH72   2 2
No Yes Aromatoleum aromaticum EbN1   1 1
No Yes Dechlorosoma suillum PS   4 4
No Yes Pseudogulbenkiania sp. NH8B   1 1
No Yes Neisseria meningitidis alpha14   1 1
No Yes Neisseria meningitidis FAM18   1 1
No Yes Neisseria lactamica 020-06   1 1
No Yes Neisseria gonorrhoeae NCCP11945   1 1
No Yes Candidatus Accumulibacter phosphatis clade IIA str. UW-1   4 4
No Yes Rubrivivax gelatinosus IL144   2 2
No Yes Leptothrix cholodnii SP-6   1 1
No Yes Cupriavidus taiwanensis LMG 19424   1 1
No Yes Cupriavidus metallidurans CH34   2 2
No Yes Ralstonia eutropha H16   2 2
No Yes Ralstonia pickettii 12D   2 2
No Yes Burkholderia sp. RPE64   1 1
No Yes Burkholderia thailandensis E264   1 1
No Yes Burkholderia pseudomallei 1106a   1 1
No Yes Burkholderia cenocepacia HI2424   1 1
No Yes Burkholderia multivorans ATCC 17616   1 1
No Yes Alicycliphilus denitrificans K601   2 2
No Yes Rhodoferax ferrireducens T118   3 3
No Yes Acidovorax ebreus TPSY   2 2
No Yes Acidovorax sp. JS42   2 2
No Yes Collimonas fungivorans Ter331   1 1
No Yes Janthinobacterium sp. Marseille   1 1
No Yes Bordetella petrii DSM 12804   1 1
No Yes Achromobacter xylosoxidans A8   1 1
No Yes Achromobacter xylosoxidans   1 1
No Yes Thiobacillus denitrificans ATCC 25259   2 2
No Yes Maricaulis maris MCS10   1 1
No Yes Dinoroseobacter shibae DFL 12   1 1
No Yes Pseudovibrio sp. FO-BEG1   1 1
No Yes Ruegeria pomeroyi DSS-3   1 1
No Yes Roseobacter litoralis Och 149   1 1
No Yes Roseobacter denitrificans OCh 114   1 1
No Yes Rhodobacter capsulatus SB 1003   3 3
No Yes Paracoccus denitrificans PD1222   1 1
No Yes Magnetospirillum magneticum AMB-1   4 4
No Yes Rhodospirillum centenum SW   1 1
No Yes Azospirillum lipoferum 4B   1 1
No Yes Azospirillum brasilense Sp245   1 1
No Yes Gluconacetobacter xylinus NBRC 3288   1 1
No Yes Polymorphum gilvum SL003B-26A1   1 1
No Yes Xanthobacter autotrophicus Py2   3 3
No Yes Methylobacterium chloromethanicum CM4   2 2
No Yes Methylobacterium extorquens AM1   1 1
No Yes Methylobacterium sp. 4-46   1 1
No Yes Methylobacterium populi BJ001   1 1
No Yes Methylobacterium radiotolerans JCM 2831   1 1
No Yes Ochrobactrum anthropi ATCC 49188   2 2
No Yes Brucella microti CCM 4915   1 1
No Yes Brucella pinnipedialis B2/94   1 1
No Yes Brucella canis ATCC 23365   1 1
No Yes Brucella suis ATCC 23445   1 1
No Yes Brucella melitensis ATCC 23457   1 1
No Yes Brucella ovis ATCC 25840   1 1
No Yes Brucella abortus S19   1 1
No Yes Hyphomicrobium sp. MC1   1 1
No Yes Hyphomicrobium denitrificans ATCC 51888   1 1
No Yes Rhodopseudomonas palustris BisA53   1 1
No Yes Nitrobacter winogradskyi Nb-255   1 1
No Yes Bradyrhizobium japonicum USDA 110   2 2
No Yes Cellvibrio japonicus Ueda107   1 1
No Yes Photobacterium profundum SS9   1 1
No Yes Psychromonas ingrahamii 37   1 1
No Yes Psychromonas sp. CNPT3   2 1
No Yes Ferrimonas balearica DSM 9799   2 2
No Yes Shewanella piezotolerans WP3   1 1
No Yes Shewanella loihica PV-4   2 2
No Yes Shewanella halifaxensis HAW-EB4   2 2
No Yes Shewanella sediminis HAW-EB3   2 2
No Yes Shewanella denitrificans OS217   1 1
No Yes Shewanella pealeana ATCC 700345   2 2
No Yes Shewanella oneidensis MR-1   1 1
No Yes Shewanella baltica OS185   1 1
No Yes Shewanella woodyi ATCC 51908   2 2
No Yes Shewanella sp. MR-4   1 1
No Yes Shewanella putrefaciens CN-32   1 1
No Yes Colwellia psychrerythraea 34H   1 1
No Yes Marinobacter sp. BSs20148   1 1
No Yes Marinobacter hydrocarbonoclasticus ATCC 49840   1 1
No Yes Marinobacter aquaeolei VT8   2 2
No Yes Alteromonas macleodii str. 'Deep ecotype'   2 2
No Yes Hahella chejuensis KCTC 2396   1 1
No Yes Rhodanobacter denitrificans   1 1
No Yes Alkalilimnicola ehrlichii MLHE-1   2 2
No Yes Thioalkalivibrio sulfidophilus HL-EbGr7   1 1
No Yes gamma proteobacterium HdN1   1 1
No Yes Pseudomonas sp. TKP   1 1
No Yes Pseudomonas sp. UW4   1 1
No Yes Pseudomonas brassicacearum subsp. brassicacearum NFM421   2 2
No Yes Pseudomonas stutzeri A1501   1 1
No Yes Pseudomonas aeruginosa UCBPP-PA14   1 1
No Yes Acinetobacter oleivorans DR1   1 1
No Yes Acinetobacter calcoaceticus PHEA-2   1 1
No Yes Acinetobacter baumannii ATCC 17978   1 1
No Yes Methylophaga sp. JAM1   1 1
No Yes Candidatus Caldiarchaeum subterraneum   1 1
No Yes Sulfolobus islandicus Y.N.15.51   1 1
No Yes Pyrobaculum sp. 1860   2 2
No Yes Pyrobaculum calidifontis JCM 11548   3 3
No Yes Pyrobaculum arsenaticum DSM 13514   2 2
No Yes Pyrobaculum oguniense TE7   2 2
No Yes Pyrobaculum aerophilum str. IM2   2 2
No Yes Ferroglobus placidus DSM 10642   1 1
No Yes Salinarchaeum sp. Harcht-Bsk1   3 3
No Yes Halopiger xanaduensis SH-6   2 2
No Yes Haloterrigena turkmenica DSM 5511   2 2
No Yes Natrinema sp. J7-2   1 1
No Yes Natrialba magadii ATCC 43099   7 7
No Yes Halorubrum lacusprofundi ATCC 49239   2 2
No Yes Halogeometricum borinquense DSM 11551   2 2
No Yes Haloferax mediterranei ATCC 33500   3 3
No Yes Haloferax volcanii DS2   3 3
No Yes Halomicrobium mukohataei DSM 12286   2 2
No Yes Halorhabdus utahensis DSM 12940   2 2
No Yes Natronomonas pharaonis DSM 2160   5 5
No Yes Haloarcula hispanica ATCC 33960   2 2
No Yes Haloarcula marismortui ATCC 43049   2 2
No Yes Chamaesiphon minutus PCC 6605   1 1
No Yes Dactylococcopsis salina PCC 8305   1 1
No Yes Streptomyces venezuelae ATCC 10712   1 1
No Yes Amycolatopsis mediterranei RB   2 2
No Yes Amycolatopsis mediterranei S699   2 2
No Yes Amycolatopsis mediterranei S699   2 2
No Yes Amycolatopsis orientalis HCCB10007   2 2
No Yes Nocardia brasiliensis ATCC 700358   2 2
No Yes Mycobacterium sp. JDM601   1 1
No Yes Mycobacterium abscessus subsp. bolletii 50594   1 1
No Yes Mycobacterium avium subsp. paratuberculosis K-10   1 1
No Yes Mycobacterium gilvum Spyr1   1 1
No Yes Mycobacterium smegmatis str. MC2 155   1 1
No Yes Corynebacterium ulcerans BR-AD22   1 1
No Yes Corynebacterium ulcerans 809   1 1
No Yes Corynebacterium pseudotuberculosis 258   1 1
No Yes Corynebacterium pseudotuberculosis 3/99-5   1 1
No Yes Erysipelothrix rhusiopathiae SY1027   1 1
No Yes Desulfosporosinus meridiei DSM 13257   1 1
No Yes Desulfitobacterium dichloroeliminans LMG P-21439   1 1
No Yes Desulfitobacterium hafniense DCB-2   1 1
No Yes Clostridium difficile BI1   1 1
No Yes Clostridium difficile R20291   1 1
No Yes Clostridium difficile CD196   1 1
No Yes Clostridium botulinum H04402 065   1 1
No Yes Clostridium botulinum F str. 230613   1 1
No Yes Clostridium botulinum F str. Langeland   1 1
No Yes Clostridium botulinum A2 str. Kyoto   1 1
No Yes Clostridium botulinum A str. Hall   1 1
No Yes Clostridium botulinum A str. ATCC 19397   1 1
No Yes Thermobacillus composti KWC4   1 1
No Yes Paenibacillus larvae subsp. larvae DSM 25430   1 1
No Yes Geobacillus sp. Y4.1MC1   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum sequencing   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum UCMB5033   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum AS43.3   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum YAU B9601-Y2   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum UCMB5113   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum UCMB5036   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum CAU B946   1 1
No Yes Bacillus amyloliquefaciens LFB112   1 1
No Yes Bacillus amyloliquefaciens CC178   1 1
No Yes Bacillus amyloliquefaciens Y2   1 1
No Yes Bacillus amyloliquefaciens IT-45   1 1
No Yes Bacillus amyloliquefaciens XH7   1 1
No Yes Bacillus amyloliquefaciens LL3   1 1
No Yes Bacillus amyloliquefaciens TA208   1 1
No Yes Bacillus amyloliquefaciens DSM 7   1 1
No Yes Bacillus licheniformis 9945A   1 1
No Yes Bacillus subtilis PY79   1 1
No Yes Bacillus subtilis XF-1   1 1
No Yes Bacillus subtilis QB928   1 1
No Yes Bacillus subtilis BSn5   1 1
No Yes Bacillus subtilis subsp. subtilis str. BAB-1   1 1
No Yes Bacillus subtilis subsp. subtilis str. BSP1   1 1
No Yes Bacillus subtilis subsp. subtilis str. RO-NN-1   1 1
No Yes Bacillus subtilis subsp. subtilis 6051-HGW   1 1
No Yes Bacillus subtilis subsp. spizizenii TU-B-10   1 1
No Yes Bacillus subtilis subsp. spizizenii str. W23   1 1
No Yes Bacillus subtilis subsp. natto BEST195   1 1
No Yes Bacillus licheniformis DSM 13 = ATCC 14580   1 1
No Yes Bacillus toyonensis BCT-7112   1 1
No Yes Bacillus thuringiensis HD-771   1 1
No Yes Bacillus thuringiensis HD-789   1 1
No Yes Bacillus thuringiensis MC28   1 1
No Yes Bacillus thuringiensis serovar chinensis CT-43   1 1
No Yes Bacillus thuringiensis YBT-1518   2 2
No Yes Bacillus thuringiensis Bt407   1 1
No Yes Bacillus thuringiensis serovar konkukian str. 97-27   1 1
No Yes Bacillus thuringiensis serovar kurstaki str. HD73   1 1
No Yes Bacillus thuringiensis BMB171   1 1
No Yes Bacillus thuringiensis serovar finitimus YBT-020   1 1
No Yes Bacillus thuringiensis serovar thuringiensis str. IS5056   1 1
No Yes Bacillus cereus FRI-35   1 1
No Yes Bacillus cereus biovar anthracis str. CI   1 1
No Yes Bacillus cereus AH820   1 1
No Yes Bacillus cereus AH187   1 1
No Yes Bacillus cereus B4264   1 1
No Yes Bacillus cereus G9842   1 1
No Yes Bacillus cereus Q1   1 1
No Yes Bacillus cereus F837/76   1 1
No Yes Bacillus cereus NC7401   1 1
No Yes Bacillus cereus E33L   1 1
No Yes Bacillus cereus ATCC 14579   1 1
No Yes Bacillus cereus ATCC 10987   1 1
No Yes Bacillus anthracis str. H9401   1 1
No Yes Bacillus anthracis str. CDC 684   1 1
No Yes Bacillus anthracis str. 'Ames Ancestor'   1 1
No Yes Bacillus anthracis str. Sterne   1 1
No Yes Bacillus anthracis str. Ames   1 1
No Yes Staphylococcus pseudintermedius ED99   1 1
No Yes Staphylococcus epidermidis ATCC 12228   1 1
No Yes Staphylococcus aureus Bmb9393   1 1
No Yes Staphylococcus aureus ST228/18341   1 1
No Yes Staphylococcus aureus ST228/16035   1 1
No Yes Staphylococcus aureus ST228/15532   1 1
No Yes Staphylococcus aureus ST228/10497   1 1
No Yes Staphylococcus aureus ST228/10388   1 1
No Yes Staphylococcus aureus subsp. aureus Z172   2 2
No Yes Staphylococcus aureus subsp. aureus 11819-97   1 1
No Yes Staphylococcus aureus subsp. aureus TW20   2 2
No Yes Staphylococcus aureus subsp. aureus 55/2053   1 1
No Yes Rhodothermus marinus SG0.5JP17-172   1 1
No Yes Psychroflexus torquis ATCC 700755   1 1
No Yes Riemerella anatipestifer RA-CH-2   1 1
No Yes Riemerella anatipestifer RA-CH-1   1 1
No Yes Riemerella anatipestifer RA-GD   1 1
No Yes Riemerella anatipestifer ATCC 11845 = DSM 15868   1 1
No Yes Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'   1 1
No Yes Brachyspira pilosicoli WesB   1 1
No Yes Brachyspira pilosicoli B2904   1 1
No Yes Brachyspira pilosicoli P43/6/78   1 1
No Yes Hydrogenobacter thermophilus TK-6   3 3
No Yes Arcobacter butzleri 7h1h   2 2
No Yes Arcobacter butzleri ED-1   2 2
No Yes Geobacter sulfurreducens PCA   3 3
No Yes Sorangium cellulosum So0157-2   1 1
No Yes Anaeromyxobacter sp. K   2 2
No Yes Anaeromyxobacter dehalogenans 2CP-C   2 2
No Yes Neisseria meningitidis WUE 2594   1 1
No Yes Neisseria meningitidis G2136   1 1
No Yes Neisseria meningitidis M04-240196   1 1
No Yes Neisseria meningitidis M01-240149   1 1
No Yes Neisseria meningitidis NZ-05/33   1 1
No Yes Neisseria meningitidis M01-240355   1 1
No Yes Neisseria meningitidis 8013   1 1
No Yes Neisseria meningitidis 053442   1 1
No Yes Neisseria meningitidis Z2491   1 1
No Yes Neisseria meningitidis H44/76   1 1
No Yes Neisseria meningitidis alpha710   1 1
No Yes Neisseria meningitidis MC58   1 1
No Yes Neisseria gonorrhoeae TCDC-NG08107   1 1
No Yes Neisseria gonorrhoeae FA 1090   1 1
No Yes Burkholderia phenoliruptrix BR3459a   1 1
No Yes Ralstonia pickettii 12J   3 3
No Yes Ralstonia solanacearum FQY_4   2 2
No Yes Ralstonia solanacearum CMR15   1 1
No Yes Ralstonia solanacearum GMI1000   2 2
No Yes Burkholderia sp. YI23   3 3
No Yes Burkholderia pseudomallei MSHR305   1 1
No Yes Burkholderia pseudomallei NCTC 13179   1 1
No Yes Burkholderia pseudomallei BPC006   1 1
No Yes Burkholderia pseudomallei 1026b   1 1
No Yes Burkholderia pseudomallei MSHR346   1 1
No Yes Burkholderia pseudomallei 668   1 1
No Yes Burkholderia pseudomallei 1710b   1 1
No Yes Burkholderia pseudomallei K96243   1 1
No Yes Burkholderia mallei ATCC 23344   1 1
No Yes Burkholderia cenocepacia MC0-3   1 1
No Yes Burkholderia cenocepacia AU 1054   1 1
No Yes Burkholderia cenocepacia J2315   1 1
No Yes Burkholderia multivorans ATCC 17616   1 1
No Yes Alicycliphilus denitrificans BC   2 2
No Yes Variovorax paradoxus EPS   1 1
No Yes Achromobacter xylosoxidans NBRC 15126 = ATCC 27061   1 1
No Yes Sulfuricella denitrificans skB26   1 1
No Yes Rhodobacter sphaeroides KD131   1 1
No Yes Rhodobacter sphaeroides ATCC 17025   1 1
No Yes Magnetospirillum gryphiswaldense MSR-1 v2   3 3
No Yes Methylobacterium extorquens DM4   1 1
No Yes Methylobacterium extorquens PA1   1 1
No Yes Brucella ceti TE10759-12   1 1
No Yes Brucella ceti TE28753-12   1 1
No Yes Brucella canis HSK A52141   1 1
No Yes Brucella suis VBI22   1 1
No Yes Brucella suis 1330   1 1
No Yes Brucella suis 1330   1 1
No Yes Brucella melitensis NI   1 1
No Yes Brucella melitensis M5-90   1 1
No Yes Brucella melitensis M28   1 1
No Yes Brucella melitensis bv. 1 str. 16M   1 1
No Yes Brucella abortus A13334   1 1
No Yes Brucella melitensis biovar Abortus 2308   1 1
No Yes Brucella abortus bv. 1 str. 9-941   1 1
No Yes Sinorhizobium fredii USDA 257   1 1
No Yes Sinorhizobium fredii HH103   1 1
No Yes Sinorhizobium meliloti GR4   1 1
No Yes Sinorhizobium meliloti Rm41   1 1
No Yes Sinorhizobium meliloti BL225C   1 1
No Yes Sinorhizobium meliloti 1021   1 1
No Yes Hyphomicrobium nitrativorans NL23   1 1
No Yes Hyphomicrobium denitrificans 1NES1   2 2
No Yes Oligotropha carboxidovorans OM5   1 1
No Yes Oligotropha carboxidovorans OM5   1 1
No Yes Rhodopseudomonas palustris DX-1   1 1
No Yes Rhodopseudomonas palustris TIE-1   1 1
No Yes Rhodopseudomonas palustris HaA2   2 2
No Yes Rhodopseudomonas palustris BisB18   1 1
No Yes Rhodopseudomonas palustris CGA009   1 1
No Yes Bradyrhizobium sp. S23321   1 1
No Yes Bradyrhizobium sp. BTAi1   2 2
No Yes Bradyrhizobium oligotrophicum S58   2 2
No Yes Bradyrhizobium japonicum USDA 6   2 2
No Yes Shewanella sp. W3-18-1   1 1
No Yes Shewanella baltica OS678   1 1
No Yes Shewanella baltica OS195   1 1
No Yes Shewanella sp. MR-7   1 1
No Yes Shewanella putrefaciens 200   1 1
No Yes Alcanivorax dieselolei B5   2 2
No Yes Thioalkalivibrio nitratireducens DSM 14787   3 3
No Yes Salmonella enterica subsp. enterica serovar Newport str. SL254   1 1
No Yes Escherichia coli UMNK88   1 1
No Yes Pseudomonas denitrificans ATCC 13867   1 1
No Yes Pseudomonas stutzeri CCUG 29243   1 1
No Yes Pseudomonas stutzeri DSM 10701   1 1
No Yes Pseudomonas stutzeri DSM 4166   2 2
No Yes Pseudomonas stutzeri RCH2   1 1
No Yes Pseudomonas stutzeri ATCC 17588 = LMG 11199   1 1
No Yes Pseudomonas monteilii SB3101   1 1
No Yes Pseudomonas monteilii SB3078   1 1
No Yes Pseudomonas putida H8234   1 1
No Yes Pseudomonas putida HB3267   1 1
No Yes Pseudomonas putida NBRC 14164   1 1
No Yes Pseudomonas putida S16   1 1
No Yes Pseudomonas putida W619   2 2
No Yes Pseudomonas putida KT2440   1 1
No Yes Pseudomonas fluorescens F113   2 2
No Yes Pseudomonas fluorescens R124   1 1
No Yes Pseudomonas fluorescens Pf0-1   1 1
No Yes Pseudomonas resinovorans NBRC 106553   1 1
No Yes Pseudomonas mendocina NK-01   1 1
No Yes Pseudomonas aeruginosa SCV20265   2 2
No Yes Pseudomonas aeruginosa MTB-1   1 1
No Yes Pseudomonas aeruginosa LES431   2 2
No Yes Pseudomonas aeruginosa RP73   2 2
No Yes Pseudomonas aeruginosa B136-33   1 1
No Yes Pseudomonas aeruginosa PA1R   2 2
No Yes Pseudomonas aeruginosa PA1   2 2
No Yes Pseudomonas aeruginosa DK2   2 2
No Yes Pseudomonas aeruginosa NCGM2.S1   1 1
No Yes Pseudomonas aeruginosa M18   2 2
No Yes Pseudomonas aeruginosa LESB58   2 2
No Yes Pseudomonas aeruginosa PA7   1 1
No Yes Pseudomonas aeruginosa PAO1   2 2
No Yes Acinetobacter genomosp. 13TU RUH2624   1 1
No Yes Acinetobacter baumannii ZW85-1   1 1
No Yes Acinetobacter baumannii TYTH-1   1 1
No Yes Acinetobacter baumannii BJAB0868   1 1
No Yes Acinetobacter baumannii BJAB0715   1 1
No Yes Acinetobacter baumannii BJAB07104   1 1
No Yes Acinetobacter baumannii TCDC-AB0715   1 1
No Yes Acinetobacter baumannii D1279779   1 1
No Yes Acinetobacter baumannii MDR-TJ   1 1
No Yes Acinetobacter baumannii 1656-2   1 1
No Yes Acinetobacter baumannii ATCC 19606   1 1
No Yes Acinetobacter baumannii AB307-0294   1 1
No Yes Acinetobacter baumannii AYE   1 1
No Yes Acinetobacter baumannii MDR-ZJ06   1 1
No Yes Acinetobacter baumannii AB0057   1 1
No Yes Acinetobacter baumannii ACICU   1 1
No Yes Cycloclasticus zancles 7-ME   2 2
No Yes Halovivax ruber XH-70   4 4
No Yes Natrinema pellirubrum DSM 15624   3 3
No Yes Natronococcus occultus SP4   2 2
No Yes Natronobacterium gregoryi SP2   5 5
No Yes Halorhabdus tiamatea SARL4B   2 2
No Yes Natronomonas moolapensis 8.8.11   6 6
No Yes Haloarcula hispanica N601   2 2
No Yes 1_050719N (meta-genome)   9 9
No Yes 2_050719S (meta-genome)   4 4
No Yes 3_050719R (meta-genome)   8 8
No Yes 4_050719Q (meta-genome)   1 1
No Yes 5_050719P (meta-genome)   4 4
No Yes Activated sludge plasmid pool Visp-2009 (Newbler) (meta-genome)   1 1
No Yes Bath Hot Springs, filamentous community (meta-genome)   2 2
No Yes Bath Hot Springs, planktonic community (meta-genome)   9 9
No Yes Combined (meta-genome)   3 3
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   3 3
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   1 1
No Yes Dump bottom (Dump bottom) (meta-genome)   15 15
No Yes Dump top (Dump top) (meta-genome)   16 16
No Yes Endophytic microbiome from Rice (meta-genome)   2 2
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #1 (meta-genome)   16 14
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome)   1 1
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #3 (meta-genome)   2 2
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   13 13
No Yes Fungus garden combined (combined) (meta-genome)   1 1
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   4 4
No Yes Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes   4 4
No Yes Guerrero Negro salt ponds hypersaline mat 09(Y) (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP8 from OSP Spring (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP10 from Narrow Gauge (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP11 from Octopus Springs (meta-genome)   8 8
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP12 from Calcite Springs, Tower Falls Region (meta-genome)   5 5
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP13 from Bechler Spring (meta-genome)   6 6
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP14 from OSP Spring (meta-genome)   6 6
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome)   3 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome)   4 4
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP4 from Joseph's Coat Springs (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP9 from Dragon Spring, Norris Geyser Basin (meta-genome)   5 5
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   4 4
No Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome)   3 3
No Yes Marine anammox bioreactor enriched for Scalindua species (meta-genome)   6 6
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   13 13
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   4 4
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   7 7
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   2 2
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   2 2
No Yes Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome)   1 1
No Yes NCBI 2017_08 genome   21192 21113
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   9 9
No Yes Olavius algarvensis endosymbiont metagenome Delta1 (meta-genome)   2 2
No Yes Olavius algarvensis endosymbiont metagenome Gamma3 (meta-genome)   2 2
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   11 11
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   10 10
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   13 13
No Yes Sludge/Australian, Phrap Assembly (meta-genome)   5 5
No Yes Sludge/US, Jazz Assembly (meta-genome)   5 5
No Yes Sludge/US, Phrap Assembly (meta-genome)   9 9
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   3 3
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   12 12
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   7 7
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   5 5
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   6 6
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   2 2
No Yes STRING v9.0.5 (STRING)   319 313
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   11 11
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome)   3 3
No Yes Uniprot 2018_03 genome   6098 5997
No Yes Uranium Contaminated Groundwater FW106 (meta-genome)   2 2
No Yes Global Ocean Sampling Expedition (GOS)   22 22
No Yes NCBI plasmid sequences (Plasmids)   99 99
No Yes PDB chains (SCOP 1.75) (PDB)   2 2
No Yes Protein Data Bank (all PDB sequenc)   36 36
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   108 108
No Yes TargetDB (Targets)   16 16
No Yes The Salmonella enterica Pan-genome (meta-genome)   1 1

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