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NMB0513-like superfamily domain assignments
in
Pasteurella multocida subsp. multocida str. Pm70

Network of domain occurrence in all genomes


Assignment details

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Pasteurella multocida subsp. multocida str. Pm70 has 4 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|15603499|ref|NP_246573.1|   2.22e-33   7-117   NMB0513-like  
gi|15603500|ref|NP_246574.1|   1.44e-37   2-121   NMB0513-like  
gi|15603501|ref|NP_246575.1|   8.37e-37   2-121   NMB0513-like  
gi|15603502|ref|NP_246576.1|   2.48e-39   17-145   NMB0513-like  

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Select to display   Genome       Domains   Proteins
No Yes ALL   3827 3827
No Yes Neisseria meningitidis FAM18   2 2
No Yes Neisseria lactamica 020-06   2 2
No Yes Burkholderia phymatum STM815   1 1
No Yes Ralstonia solanacearum CFBP2957   1 1
No Yes Burkholderia gladioli BSR3   1 1
No Yes Advenella kashmirensis WT001   1 1
No Yes Stenotrophomonas maltophilia K279a   1 1
No Yes Xylella fastidiosa M23   14 14
No Yes Photorhabdus asymbiotica   1 1
No Yes Rahnella aquatilis CIP 78.65 = ATCC 33071   1 1
No Yes Serratia sp. AS12   2 2
No Yes Serratia plymuthica AS9   2 2
No Yes Serratia proteamaculans 568   3 3
No Yes Pectobacterium atrosepticum SCRI1043   1 1
No Yes Citrobacter rodentium ICC168   1 1
No Yes Moraxella catarrhalis RH4   1 1
No Yes Neisseria meningitidis G2136   2 2
No Yes Neisseria meningitidis M04-240196   3 3
No Yes Neisseria meningitidis M01-240149   1 1
No Yes Neisseria meningitidis NZ-05/33   1 1
No Yes Neisseria meningitidis M01-240355   3 3
No Yes Neisseria meningitidis 8013   2 2
No Yes Neisseria meningitidis 053442   2 2
No Yes Neisseria meningitidis H44/76   2 2
No Yes Neisseria meningitidis alpha710   2 2
No Yes Neisseria meningitidis MC58   3 3
No Yes Bibersteinia trehalosi USDA-ARS-USMARC-192   1 1
No Yes Pasteurella multocida subsp. multocida str. Pm70   4 4
No Yes Xylella fastidiosa subsp. fastidiosa GB514   12 12
No Yes Xylella fastidiosa M12   7 7
No Yes Xylella fastidiosa Temecula1   12 12
No Yes Xylella fastidiosa 9a5c   10 10
No Yes Serratia sp. AS13   2 2
No Yes Serratia plymuthica S13   3 3
No Yes Serratia marcescens FGI94   1 1
No Yes Serratia marcescens WW4   1 1
No Yes Serratia liquefaciens ATCC 27592   1 1
No Yes Pectobacterium carotovorum subsp. carotovorum PCC21   1 1
No Yes Raoultella ornithinolytica B6   2 2
No Yes Klebsiella pneumoniae 342   1 1
No Yes Enterobacter cloacae SCF1   1 1
No Yes Acinetobacter baumannii D1279779   1 1
No Yes Acinetobacter baumannii ATCC 19606   2 2
No Yes Combined (meta-genome)   2 2
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   1 1
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   1 1
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   3 3
No Yes NCBI 2017_08 genome   3084 3081
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   5 5
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   7 7
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   23 23
No Yes STRING v9.0.5 (STRING)   62 62
No Yes Uniprot 2018_03 genome   433 432
No Yes NCBI plasmid sequences (Plasmids)   5 5
No Yes PDB chains (SCOP 1.75) (PDB)   1 1
No Yes Protein Data Bank (all PDB sequenc)   2 2
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   6 6
No Yes TargetDB (Targets)   9 9

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