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Ava3019-like superfamily domain assignments
in
all genomes

Assignment details

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25 selected genomes have 28 significant domains in 28 proteins.

Showing genomes 1 to 25 of 94
  1 2 3 4   Next Last

Chlorella variabilis sp. NC64A has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
jgi|ChlNC64A_1|133204|IGS.gm_1_00340   2.88e-20   47-189   Ava3019-like  

Volvox carteri f. nagariensis has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
jgi|Volca1|103872|estExt_fgenesh4_pg.C_100005   3.4e-20   76-214   Ava3019-like  

Volvox carteri v199 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
Vocar20015162m|PACid:23132594   3.4e-20   76-214   Ava3019-like  

Chlamydomonas reinhardtii 4.0 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
jgi|Chlre4|184305|estExt_fgenesh2_kg.C_240070   6.8e-22   89-225   Ava3019-like  

Ostreococcus sp. RCC809 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
jgi|OstRCC809_1|26424|e_gw1.8.957.1   4.71e-25   1-91   Ava3019-like  

Ostreococcus lucimarinus CCE9901 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
jgi|Ost9901_3|43989|e_gwEuk.11.430.1   4.71e-26   1-91   Ava3019-like  

Ostreococcus tauri has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
jgi|Ostta4|35418|1100010068   3.66e-31   93-230   Ava3019-like  

Bathycoccus prasinos has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
Bathy13g02950   1.2e-22   167-286   Ava3019-like  

Micromonas sp. RCC299 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
jgi|MicpuN2|103416|fgenesh2_pg.C_Chr_12000128   2.09e-30   118-258   Ava3019-like  

Micromonas pusilla CCMP1545 v3.0 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
jgi|MicpuC3|142712|gw1.10.682.1   2.75e-31   34-173   Ava3019-like  

Bigelowiella natans CCMP2755 22 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
JGI_V11_36045   8.11e-16   2-91   Ava3019-like  

Fragilariopsis cylindrus has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
jgi|Fracy1|218317|fgenesh2_kg.7_#_209_#_3964_1_CCUX_EXTA   0.0000000000000314   105-220   Ava3019-like  
jgi|Fracy1|222233|fgenesh2_kg.62_#_28_#_3964_1_CCUX_EXTA   0.0000589   105-138   Ava3019-like  
 
Weak hits:
jgi|Fracy1|226251|fgenesh2_pm.7_#_310   0.0589   318-370   Ava3019-like  

Thalassiosira pseudonana CCMP1335 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
jgi|Thaps3|25886|estExt_fgenesh1_pg.C_chr_240015   1.02e-17   69-254   Ava3019-like  

Symbiodinium minutum clade B1 v1.2 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
symbB.v1.2.011450.t1|scaffold762.1|size178242|11   0.00000000000000275   63-184   Ava3019-like  
 
Weak hits:
symbB.v1.2.033612.t1|scaffold4200.1|size43131|3   0.0575   835-915   Ava3019-like  

Guillardia theta CCMP2712 v1.0 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
jgi|Guith1|137276|fgenesh2_pg.24_#_164   0.000000275   212-345   Ava3019-like  
jgi|Guith1|62358|gw1.181.24.1   0.00000000000000366   1-98   Ava3019-like  

Emiliania huxleyi CCMP1516 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
jgi|Emihu1|206375|gm1.2600264   0.0000000000000549   106-218   Ava3019-like  
jgi|Emihu1|471782|estExtDG_fgeneshEH_pg.C_67490001   0.0000000000000051   81-196   Ava3019-like  

Leptolyngbya sp. PCC 7376 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|427723596|ref|YP_007070873.1|   5.1e-37   6-135   Ava3019-like  

Pseudanabaena sp. PCC 7367 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|428218116|ref|YP_007102581.1|   2.22e-35   9-138   Ava3019-like  

Acaryochloris marina MBIC11017 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|158333781|ref|YP_001514953.1|   4.05e-41   5-133   Ava3019-like  

Synechocystis sp. PCC 6803 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|16330167|ref|NP_440895.1|   5.23e-39   4-131   Ava3019-like  
 
Weak hits:
gi|16331701|ref|NP_442429.1|   0.00759   9-71   Ava3019-like  

Synechococcus sp. CC9311 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|113953612|ref|YP_731071.1|   1.83e-38   2-130   Ava3019-like  

Synechococcus elongatus PCC 7942 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|81300675|ref|YP_400883.1|   1.27e-38   5-133   Ava3019-like  

Prochlorococcus marinus str. MIT 9515 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|123966570|ref|YP_001011651.1|   7.72e-39   2-127   Ava3019-like  

Microcoleus sp. PCC 7113 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|428311329|ref|YP_007122306.1|   2.62e-44   9-137   Ava3019-like  

Geitlerinema sp. PCC 7407 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|428227147|ref|YP_007111244.1|   1.96e-37   10-138   Ava3019-like  

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Select to display   Genome       Domains   Proteins
No Yes ALL   1003 1003
No Yes Chlorella variabilis sp. NC64A   1 1
No Yes Volvox carteri f. nagariensis   1 1
No Yes Volvox carteri v199   1 1
No Yes Chlamydomonas reinhardtii 4.0   1 1
No Yes Ostreococcus sp. RCC809   1 1
No Yes Ostreococcus lucimarinus CCE9901   1 1
No Yes Ostreococcus tauri   1 1
No Yes Bathycoccus prasinos   1 1
No Yes Micromonas sp. RCC299   1 1
No Yes Micromonas pusilla CCMP1545 v3.0   1 1
No Yes Bigelowiella natans CCMP2755 22   1 1
No Yes Fragilariopsis cylindrus   2 2
No Yes Thalassiosira pseudonana CCMP1335   1 1
No Yes Symbiodinium minutum clade B1 v1.2   1 1
No Yes Guillardia theta CCMP2712 v1.0   2 2
No Yes Emiliania huxleyi CCMP1516   2 2
No Yes Leptolyngbya sp. PCC 7376   1 1
No Yes Pseudanabaena sp. PCC 7367   1 1
No Yes Acaryochloris marina MBIC11017   1 1
No Yes Synechocystis sp. PCC 6803   1 1
No Yes Synechococcus sp. CC9311   1 1
No Yes Synechococcus elongatus PCC 7942   1 1
No Yes Prochlorococcus marinus str. MIT 9515   1 1
No Yes Microcoleus sp. PCC 7113   1 1
No Yes Geitlerinema sp. PCC 7407   1 1
No Yes Cyanothece sp. PCC 8802   1 1
No Yes Gloeocapsa sp. PCC 7428   1 1
No Yes Halothece sp. PCC 7418   1 1
No Yes Microcystis aeruginosa NIES-843   1 1
No Yes Gloeobacter violaceus PCC 7421   1 1
No Yes Rivularia sp. PCC 7116   1 1
No Yes Calothrix sp. PCC 7507   1 1
No Yes Anabaena variabilis ATCC 29413   1 1
No Yes 'Nostoc azollae' 0708   1 1
No Yes Nostoc sp. PCC 7107   1 1
No Yes Nostoc punctiforme PCC 73102   1 1
No Yes Nostoc sp. PCC 7120   1 1
No Yes Nostoc sp. PCC 7524   1 1
No Yes Anabaena sp. 90   1 1
No Yes Chroococcidiopsis thermalis PCC 7203   1 1
No Yes Synechocystis sp. PCC 6803 substr. PCC-P   1 1
No Yes Synechocystis sp. PCC 6803 substr. PCC-N   1 1
No Yes Synechocystis sp. PCC 6803 substr. GT-I   1 1
No Yes Synechocystis sp. PCC 6803   1 1
No Yes Cyanobium gracile PCC 6307   1 1
No Yes Dactylococcopsis salina PCC 8305   1 1
No Yes Synechococcus sp. CC9902   1 1
No Yes Synechococcus sp. RCC307   1 1
No Yes Synechococcus sp. CC9605   1 1
No Yes Synechococcus sp. WH 8102   1 1
No Yes Synechococcus sp. WH 7803   1 1
No Yes Synechococcus sp. PCC 7002   1 1
No Yes Synechococcus elongatus PCC 6301   1 1
No Yes Prochlorococcus marinus str. NATL1A   1 1
No Yes Prochlorococcus marinus str. MIT 9301   1 1
No Yes Prochlorococcus marinus str. AS9601   1 1
No Yes Prochlorococcus marinus subsp. marinus str. CCMP1375   1 1
No Yes Prochlorococcus marinus subsp. pastoris str. CCMP1986   1 1
No Yes Prochlorococcus marinus str. MIT 9215   1 1
No Yes Prochlorococcus marinus str. MIT 9211   1 1
No Yes Prochlorococcus marinus str. MIT 9313   1 1
No Yes Prochlorococcus marinus str. MIT 9312   1 1
No Yes Prochlorococcus marinus str. MIT 9303   1 1
No Yes Prochlorococcus marinus str. NATL2A   1 1
No Yes Crinalium epipsammum PCC 9333   1 1
No Yes Oscillatoria nigro-viridis PCC 7112   1 1
No Yes Arthrospira platensis NIES-39   1 1
No Yes Cyanothece sp. PCC 7822   1 1
No Yes Cyanothece sp. PCC 7425   1 1
No Yes Cyanothece sp. PCC 7424   1 1
No Yes Cyanothece sp. ATCC 51142   1 1
No Yes Cyanothece sp. PCC 8801   1 1
No Yes Cyanobacterium aponinum PCC 10605   1 1
No Yes Cyanobacterium stanieri PCC 7202   1 1
No Yes Pleurocapsa minor Pleurocapsa sp. PCC 7327   1 1
No Yes Stanieria cyanosphaera PCC 7437   1 1
No Yes Calothrix parietina Calothrix sp. PCC 6303   1 1
No Yes Cylindrospermum stagnale PCC 7417   1 1
No Yes Anabaena cylindrica PCC 7122   1 1
No Yes 1_Upper_euphotic (meta-genome)   2 2
No Yes Guerrero Negro salt ponds hypersaline mat 02(H) (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   3 3
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   1 1
No Yes NCBI 2017_08 genome   328 328
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   2 2
No Yes STRING v9.0.5 (STRING)   37 37
No Yes Uniprot 2018_03 genome   334 334
No Yes Global Ocean Sampling Expedition (GOS)   104 104
No Yes PDB chains (SCOP 1.75) (PDB)   1 1
No Yes Protein Data Bank (all PDB sequenc)   3 3
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   9 9
No Yes TargetDB (Targets)   6 6

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