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YonK-like superfamily domain assignments
in
all bacterial and archaeal genomes

Network of domain occurrence in all genomes


Assignment details

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8 selected genomes have 8 significant domains in 8 proteins.


Bacillus subtilis subsp. subtilis str. 168 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|16079165|ref|NP_389989.1|   5.75e-39   2-63   Yonk-like  

Staphylococcus epidermidis RP62A has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|57867559|ref|YP_189187.1|   0.000000615   14-61   Yonk-like  
 
Weak hits:
gi|57866066|ref|YP_187688.1|   0.0785   52-79   Yonk-like  

Bacillus amyloliquefaciens subsp. plantarum UCMB5033 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|530569890|ref|YP_008413105.1|   0.000000000432   2-57   Yonk-like  

Bacillus amyloliquefaciens subsp. plantarum YAU B9601-Y2 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|384265379|ref|YP_005421086.1|   0.000000000589   7-62   Yonk-like  

Bacillus amyloliquefaciens LL3 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|384164725|ref|YP_005546104.1|   5.62e-38   2-63   Yonk-like  

Bacillus subtilis QB928 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|402776361|ref|YP_006630305.1|   5.75e-39   2-63   Yonk-like  

Bacillus subtilis subsp. subtilis 6051-HGW has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|470162305|ref|YP_007534080.1|   5.75e-39   2-63   Yonk-like  

Staphylococcus aureus subsp. aureus TW20 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|387143730|ref|YP_005732124.1|   0.000000615   14-61   Yonk-like  

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Select to display   Genome       Domains   Proteins
No Yes ALL   374 374
No Yes Bacillus subtilis subsp. subtilis str. 168   1 1
No Yes Staphylococcus epidermidis RP62A   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum UCMB5033   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum YAU B9601-Y2   1 1
No Yes Bacillus amyloliquefaciens LL3   1 1
No Yes Bacillus subtilis QB928   1 1
No Yes Bacillus subtilis subsp. subtilis 6051-HGW   1 1
No Yes Staphylococcus aureus subsp. aureus TW20   1 1
No Yes NCBI 2017_08 genome   289 289
No Yes STRING v9.0.5 (STRING)   2 2
No Yes Uniprot 2018_03 genome   55 55
No Yes NCBI plasmid sequences (Plasmids)   1 1
No Yes NCBI viral sequences (Viral)   2 2
No Yes PDB chains (SCOP 1.75) (PDB)   1 1
No Yes Protein Data Bank (all PDB sequenc)   4 4
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   8 8
No Yes TargetDB (Targets)   1 1
No Yes UniProt viral sequences (Viral)   1 1

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