SUPERFAMILY 1.75 HMM library and genome assignments server

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SMI1/KNR4-like superfamily domain assignments
in
Vibrio fischeri ES114


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Select to display   Genome       Domains   Proteins
No Yes ALL   93854 93854
No Yes Homo sapiens 76_38 Human 17 17
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 2 2
No Yes Gorilla gorilla 76_3.1 Western gorilla 3 3
No Yes Pongo abelii 76_2 Sumatran orangutan 1 1
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 2 2
No Yes Papio anubis 76 Olive baboon 3 3
No Yes Macaca mulatta 76_1 Rhesus monkey 4 4
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 6 6
No Yes Otolemur garnettii 76_3 Small-eared galago 2 2
No Yes Microcebus murinus 76_1 Gray mouse lemur 2 2
No Yes Rattus norvegicus 76_5.0 Norway rat 2 2
No Yes Mus musculus 76_38 House mouse 6 6
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 3 3
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 1 1
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 2 2
No Yes Cavia porcellus 76_3 Domestic guinea pig 2 2
No Yes Tupaia belangeri 76 Northern tree shrew 1 1
No Yes Sus scrofa 76_10.2 Pig 2 2
No Yes Bos taurus 76_3.1 Cattle 2 2
No Yes Ovis aries 76_3.1 Sheep 2 2
No Yes Vicugna pacos 76_1 Alpaca 1 1
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 2 2
No Yes Mustela putorius furo 76_1.0 Domestic ferret 2 2
No Yes Ailuropoda melanoleuca 76_1 Giant panda 1 1
No Yes Canis familiaris 76_3.1 Dog 2 2
No Yes Felis catus 76_6.2 Domestic cat 2 2
No Yes Equus caballus 76_2 Horse 2 2
No Yes Myotis lucifugus 76_2.0 Little brown bat 2 2
No Yes Pteropus vampyrus 76_1 Large flying fox 2 2
No Yes Sorex araneus 76_1 European shrew 1 1
No Yes Erinaceus europaeus 76 Western European hedgehog 1 1
No Yes Procavia capensis 76_1 Cape rock hyrax 1 1
No Yes Loxodonta africana 76_3 African savanna elephant 3 3
No Yes Echinops telfairi 76 Small Madagascar hedgehog 2 2
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 3 3
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 1 1
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 2 2
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 3 3
No Yes Ornithorhynchus anatinus 76_5 Platypus 1 1
No Yes Saccoglossus kowalevskii v3.0   2 2
No Yes Meleagris gallopavo 76_2 Turkey 1 1
No Yes Gallus gallus 76_4 Chicken 2 2
No Yes Anas platyrhynchos 76_1.0 Mallard 1 1
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 1 1
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 2 2
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 2 2
No Yes Anolis carolinensis 76_2.0 Green anole 2 2
No Yes Xenopus laevis African clawed frog 6 6
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 2 2
No Yes Latimeria chalumnae 76_1 Coelacanth 2 2
No Yes Lepisosteus oculatus 76 Spotted gar 2 2
No Yes Gadus morhua 76_1 Atlantic cod 2 2
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 2 2
No Yes Takifugu rubripes 76_4 Torafugu 1 1
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 2 2
No Yes Oryzias latipes 76_1 Japanese medaka 4 3
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 1 1
No Yes Poecilia formosa 76 Amazon molly 1 1
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 1 1
No Yes Astyanax mexicanus 76 Mexican tetra 2 2
No Yes Danio rerio 76_9 Zebrafish 3 3
No Yes Oikopleura dioica   1 1
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 1 1
No Yes Ciona intestinalis 76 Vase tunicate 1 1
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 1 1
No Yes Adineta vaga   3 3
No Yes Octopus bimaculoides 280   3 3
No Yes Crassostrea gigas 22 Pacific oyster 1 1
No Yes Lottia gigantea Owl limpet 2 2
No Yes Helobdella robusta   1 1
No Yes Capitella sp. I   3 3
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 3 3
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 1 1
No Yes Camponotus floridanus v3.3 Florida carpenter ant 1 1
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 1 1
No Yes Culex pipiens quinquefasciatus Southern house mosquito 1 1
No Yes Anopheles darlingi 22 American malaria mosquito 1 1
No Yes Anopheles gambiae 49_3j African malaria mosquito 1 1
No Yes Tribolium castaneum 3.0 Red flour beetle 1 1
No Yes Rhodnius prolixus 22   1 1
No Yes Strigamia maritima 22   1 1
No Yes Ixodes scapularis (Preliminary) Black-legged tick 1 1
No Yes Taenia solium Pork tapeworm 1 1
No Yes Schistosoma mansoni   1 1
No Yes Mnemiopsis leidyi Sea walnut 1 1
No Yes Acropora digitifera v1.0   2 2
No Yes Nematostella vectensis 1.0 Starlet sea anemone 2 2
No Yes Amphimedon queenslandica   2 2
No Yes Trichoplax adhaerens   1 1
No Yes Proterospongia sp. ATCC 50818   1 1
No Yes Mucor circinelloides   1 1
No Yes Malassezia globosa CBS 7966   2 2
No Yes Sporisorium reilianum 22   1 1
No Yes Ustilago maydis   1 1
No Yes Microbotryum violaceum 22   1 1
No Yes Wallemia sebi v1.0   1 1
No Yes Piloderma croceum F 1598 v1.0   2 2
No Yes Serpula lacrymans var. lacrymans S7.9   1 1
No Yes Coniophora puteana   1 1
No Yes Hydnomerulius pinastri v2.0   1 1
No Yes Paxillus rubicundulus Ve08.2h10 v1.0   1 1
No Yes Pisolithus microcarpus 441 v1.0   1 1
No Yes Pisolithus tinctorius Marx 270 v1.0   1 1
No Yes Scleroderma citrinum Foug A v1.0   1 1
No Yes Coprinopsis cinerea okayama7 130 v3   1 1
No Yes Pleurotus ostreatus Oyster mushroom 1 1
No Yes Amanita thiersii Skay4041 v1.0   1 1
No Yes Galerina marginata v1.0   1 1
No Yes Hebeloma cylindrosporum h7 v2.0   1 1
No Yes Laccaria bicolor S238N-H82   1 1
No Yes Schizophyllum commune   1 1
No Yes Stereum hirsutum FP-91666 SS1 v1.0   2 2
No Yes Heterobasidion annosum   1 1
No Yes Gloeophyllum trabeumv1.0   1 1
No Yes Punctularia strigosozonata v1.0   2 2
No Yes Fomitiporia mediterranea v1.0   1 1
No Yes Tulasnella calospora AL13/4D v1.0   1 1
No Yes Postia placenta   1 1
No Yes Wolfiporia cocos MD-104 SS10 v1.0   1 1
No Yes Fomitopsis pinicolav1.0   5 5
No Yes Fomitopsis pinicola FP-58527 SS1 v3.0   5 5
No Yes Phanerochaete chrysosporium RP-78 2.1   1 1
No Yes Dichomitus squalens   1 1
No Yes Trametes versicolor v1.0   1 1
No Yes Tremella mesenterica Witches' butter 1 1
No Yes Daldinia eschscholzii EC12 v1.0   1 1
No Yes Apiospora montagnei NRRL 25634 v1.0   2 2
No Yes Magnaporthe poae ATCC 64411 22   1 1
No Yes Magnaporthe grisea 70-15   2 2
No Yes Podospora anserina   1 1
No Yes Sporotrichum thermophile ATCC 42464   1 1
No Yes Thielavia terrestris NRRL 8126   1 1
No Yes Chaetomium globosum CBS 148.51   1 1
No Yes Neurospora tetrasperma   1 1
No Yes Neurospora discreta FGSC 8579   1 1
No Yes Neurospora crassa OR74A   1 1
No Yes Cryphonectria parasitica Chestnut blight fungus 1 1
No Yes Verticillium dahliae VdLs.17   1 1
No Yes Acremonium alcalophilumv 1.0   1 1
No Yes Glomerella graminicola 22   1 1
No Yes Fusarium graminearum   3 3
No Yes Nectria haematococca mpVI   3 3
No Yes Fusarium oxysporum f. sp. lycopersici 4286   3 3
No Yes Fusarium verticillioides 7600   3 3
No Yes Trichoderma asperellum CBS 433.97 v1.0   1 1
No Yes Trichoderma atroviride   1 1
No Yes Trichoderma citrinoviride v1.0   2 2
No Yes Trichoderma reesei 1.2   1 1
No Yes Trichoderma virens Gv29-8   2 2
No Yes Trichoderma longibrachiatum ATCC 18648 v1.0   1 1
No Yes Trichoderma harzianum CBS 226.95 v1.0   2 2
No Yes Amorphotheca resinae v1.0 Creosote fungus 1 1
No Yes Botrytis cinerea B05.10   1 1
No Yes Sclerotinia sclerotiorum   1 1
No Yes Blumeria graminis 22   1 1
No Yes Didymella exigua CBS 183.55 v1.0   1 1
No Yes Leptosphaeria maculans 22   1 1
No Yes Setosphaeria turcica v1.0   1 1
No Yes Cochliobolus miyabeanus ATCC 44560 v1.0   1 1
No Yes Cochliobolus victoriae FI3 v1.0   1 1
No Yes Cochliobolus carbonum 26-R-13 v1.0   1 1
No Yes Cochliobolus heterostrophus Southern corn leaf blight pathogen 1 1
No Yes Alternaria brassicicola   1 1
No Yes Cochliobolus lunatus m118 v2.0   1 1
No Yes Pyrenophora teres f. teres 22   1 1
No Yes Pyrenophora tritici-repentis   2 2
No Yes Stagonospora nodorum   2 2
No Yes Mycosphaerella graminicola IPO323   1 1
No Yes Zasmidium cellare ATCC 36951 v1.0   2 2
No Yes Dothistroma septosporum   2 2
No Yes Septoria musiva v1.0   1 1
No Yes Mycosphaerella fijiensis CIRAD86   1 1
No Yes Aureobasidium pullulans var. subglaciale EXF-2481 v1.0   2 2
No Yes Paracoccidioides brasiliensis Pb18   1 1
No Yes Coccidioides posadasii RMSCC 3488   1 1
No Yes Coccidioides immitis RS   1 1
No Yes Ajellomyces dermatitidis SLH14081   3 3
No Yes Histoplasma capsulatum class NAmI strain WU24   1 1
No Yes Microsporum canis CBS 113480   1 1
No Yes Trichophyton equinum CBS 127.97   1 1
No Yes Trichophyton verrucosum HKI 0517   1 1
No Yes Arthroderma benhamiae CBS 112371   1 1
No Yes Trichophyton tonsurans CBS 112818   1 1
No Yes Trichophyton rubrum CBS 118892   1 1
No Yes Uncinocarpus reesii 1704   1 1
No Yes Aspergillus zonatus v1.0   1 1
No Yes Penicillium chrysogenum Wisconsin 54-1255   2 2
No Yes Penicillium chrysogenum v1.0   2 2
No Yes Aspergillus acidus v1.0   1 1
No Yes Aspergillus fumigatus Af293   1 1
No Yes Aspergillus brasiliensis v1.0   1 1
No Yes Aspergillus nidulans FGSC A4   1 1
No Yes Aspergillus sydowii v1.0   1 1
No Yes Aspergillus versicolor v1.0   2 2
No Yes Aspergillus glaucus   1 1
No Yes Aspergillus carbonarius ITEM 5010   1 1
No Yes Neosartorya fischeri NRRL 181   1 1
No Yes Aspergillus terreus NIH2624   1 1
No Yes Aspergillus tubingensis v1.0   1 1
No Yes Aspergillus wentii v1.0   1 1
No Yes Aspergillus oryzae RIB40   1 1
No Yes Aspergillus niger 22   1 1
No Yes Aspergillus flavus NRRL3357   1 1
No Yes Aspergillus clavatus NRRL 1   1 1
No Yes Penicillium marneffei ATCC 18224   1 1
No Yes Tuber melanosporum Mel28 22   1 1
No Yes Tuber melanosporum Vittad Perigord truffle 1 1
No Yes Hansenula polymorpha v2.0   1 1
No Yes Dekkera bruxellensis CBS 2499 v2.0   1 1
No Yes Pichia membranifaciensv1.0   2 2
No Yes Candida tanzawaensis NRRL Y-17324 v1.0   2 2
No Yes Candida dubliniensis CD36   2 2
No Yes Candida tropicalis MYA-3404   3 2
No Yes Candida parapsilosis   2 2
No Yes Candida albicans SC5314   3 2
No Yes Lodderomyces elongisporus NRRL YB-4239   2 2
No Yes Babjeviella inositovora NRRL Y-12698 v1.0   1 1
No Yes Pichia stipitis CBS 6054   2 2
No Yes Candida guilliermondii ATCC 6260   2 2
No Yes Hyphopichia burtonii NRRL Y-1933 v1.0   3 2
No Yes Debaromyces hansenii   2 2
No Yes Wickerhamomyces anomalus   4 4
No Yes Pichia pastoris GS115   2 2
No Yes Hanseniaspora valbyensis NRRL Y-1626 v1.1   1 1
No Yes Yarrowia lipolytica CLIB122   1 1
No Yes Candida lusitaniae ATCC 42720   2 2
No Yes Metschnikowia bicuspidata NRRL YB-4993 v1.0   2 2
No Yes Vanderwaltozyma polyspora DSM 70294   1 1
No Yes Candida glabrata CBS138   1 1
No Yes Kluyveromyces thermotolerans CBS 6340   1 1
No Yes Lachancea kluyveri   2 2
No Yes Kluyveromyces waltii   1 1
No Yes Ashbya gossypii ATCC 10895   1 1
No Yes Zygosaccharomyces rouxii   1 1
No Yes Saccharomyces mikatae MIT   1 1
No Yes Saccharomyces paradoxus MIT   1 1
No Yes Saccharomyces cerevisiae 76 Baker's yeast 1 1
No Yes Saccharomyces bayanus MIT   1 1
No Yes Kluyveromyces lactis   3 3
No Yes Schizosaccharomyces cryophilus OY26 22   1 1
No Yes Schizosaccharomyces octosporus yFS286   1 1
No Yes Schizosaccharomyces japonicus yFS275   1 1
No Yes Schizosaccharomyces pombe Fission yeast 1 1
No Yes Selaginella moellendorffii   6 6
No Yes Eucalyptus grandis v201 Rose gum 3 3
No Yes Theobroma cacao B97-61/B2 v1 Cacao 1 1
No Yes Gossypium raimondii v221   4 4
No Yes Citrus clementina v165   2 2
No Yes Citrus sinensis v154 Sweet orange 4 4
No Yes Thellungiella halophila v173   1 1
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 1 1
No Yes Capsella rubella v183   1 1
No Yes Arabidopsis thaliana 10 Thale cress 1 1
No Yes Carica papaya Papaya 1 1
No Yes Medicago truncatula Barrel medic 2 2
No Yes Phaseolus vulgaris v186 French bean 1 1
No Yes Glycine max v109 Soybean 3 3
No Yes Cucumis sativus v122 Cucumber 1 1
No Yes Fragaria vesca Wild strawberry 1 1
No Yes Malus domestica v196 Apple 2 2
No Yes Prunus persica v139 Peach 1 1
No Yes Manihot esculenta v147 Cassava 1 1
No Yes Populus trichocarpa v156 Black cottonwood 2 2
No Yes Vitis vinifera Wine grape 2 2
No Yes Mimulus guttatus v140 Spotted monkey flower 1 1
No Yes Solanum lycopersicum v.2.3 Tomato 1 1
No Yes Solanum tuberosum Potato 1 1
No Yes Actinidia chinensis Hongyang   1 1
No Yes Aquilegia coerulea v195   3 3
No Yes Triticum urartu 22   1 1
No Yes Triticum aestivum 22 Bread wheat 3 3
No Yes Aegilops tauschii 22   1 1
No Yes Brachypodium distachyon Stiff brome 2 2
No Yes Oryza barthii 22 African wild rice 2 2
No Yes Oryza meridionalis 22   3 3
No Yes Oryza glumaepatula 22   1 1
No Yes Oryza glaberrima African rice 1 1
No Yes Oryza punctata 22   1 1
No Yes Oryza nivara 22   2 2
No Yes Oryza brachyantha 22 Malo sina 1 1
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 5 5
No Yes Oryza sativa v193 Rice 5 5
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 3 3
No Yes Panicum virgatum v202 Switchgrass 2 2
No Yes Setaria italica v164 Foxtail millet 2 2
No Yes Zea mays subsp. mays Maize 4 4
No Yes Zea mays v181 Maize 3 3
No Yes Sorghum bicolor Sorghum 1 1
No Yes Musa balbisiana Balbis banana 1 1
No Yes Amborella trichopoda 22   1 1
No Yes Physcomitrella patens   3 3
No Yes Thecamonas trahens ATCC 50062   2 2
No Yes Bigelowiella natans CCMP2755 22   3 3
No Yes Cyanophora paradoxa   2 2
No Yes Ectocarpus siliculosus   2 2
No Yes Albugo laibachii 22   1 1
No Yes Pythium iwayamai DAOM BR242034 22   1 1
No Yes Pythium arrhenomanes ATCC 12531 22   1 1
No Yes Pythium ultimum v1.7-2   2 2
No Yes Pythium irregulare DAOM BR486 22   1 1
No Yes Phytophthora infestans T30-4   1 1
No Yes Phytophthora capsici   1 1
No Yes Tetrahymena thermophila SB210 1   1 1
No Yes Symbiodinium minutum clade B1 v1.2   3 3
No Yes Naegleria gruberi   2 2
No Yes Guillardia theta CCMP2712 v1.0   1 1
No Yes Leptolyngbya sp. PCC 7376   2 2
No Yes Pseudanabaena sp. PCC 7367   2 2
No Yes Acaryochloris marina MBIC11017   3 3
No Yes Synechococcus sp. PCC 7502   1 1
No Yes Synechococcus sp. PCC 6312   1 1
No Yes Microcoleus sp. PCC 7113   1 1
No Yes Geitlerinema sp. PCC 7407   1 1
No Yes Cyanothece sp. PCC 8802   1 1
No Yes Gloeocapsa sp. PCC 7428   1 1
No Yes Rivularia sp. PCC 7116   7 7
No Yes Anabaena variabilis ATCC 29413   3 3
No Yes Nostoc sp. PCC 7107   3 3
No Yes Nostoc punctiforme PCC 73102   4 4
No Yes Nostoc sp. PCC 7120   1 1
No Yes Nostoc sp. PCC 7524   1 1
No Yes Anabaena sp. 90   1 1
No Yes Slackia heliotrinireducens DSM 20476   1 1
No Yes Acidothermus cellulolyticus 11B   1 1
No Yes Catenulispora acidiphila DSM 44928   1 1
No Yes Stackebrandtia nassauensis DSM 44728   2 2
No Yes Frankia symbiont of Datisca glomerata   1 1
No Yes Frankia alni ACN14a   1 1
No Yes Thermobifida fusca YX   2 2
No Yes Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111   5 5
No Yes Thermomonospora curvata DSM 43183   2 2
No Yes Streptosporangium roseum DSM 43021   5 5
No Yes Kitasatospora setae KM-6054   5 5
No Yes Streptomyces coelicolor A3(2)   5 5
No Yes Streptomyces sp. PAMC26508   7 7
No Yes Streptomyces flavogriseus ATCC 33331   6 6
No Yes Streptomyces sp. SirexAA-E   6 6
No Yes Streptomyces griseus subsp. griseus NBRC 13350   1 1
No Yes Streptomyces bingchenggensis BCW-1   9 9
No Yes Streptomyces violaceusniger Tu 4113   2 2
No Yes Streptomyces avermitilis MA-4680   8 7
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488   5 5
No Yes Streptomyces scabiei 87.22   2 2
No Yes Streptomyces hygroscopicus subsp. jinggangensis 5008   6 6
No Yes Actinosynnema mirum DSM 43827   2 2
No Yes Saccharomonospora viridis DSM 43017   1 1
No Yes Saccharopolyspora erythraea NRRL 2338   1 1
No Yes Amycolatopsis mediterranei U32   1 1
No Yes Kribbella flavida DSM 17836   1 1
No Yes Propionibacterium propionicum F0230a   1 1
No Yes Salinispora arenicola CNS-205   2 2
No Yes Salinispora tropica CNB-440   2 2
No Yes Verrucosispora maris AB-18-032   5 5
No Yes Micromonospora sp. L5   2 2
No Yes Micromonospora aurantiaca ATCC 27029   1 1
No Yes Actinoplanes sp. SE50/110   6 6
No Yes Actinoplanes missouriensis 431   4 4
No Yes Tsukamurella paurometabola DSM 20162   1 1
No Yes Gordonia sp. KTR9   1 1
No Yes Gordonia polyisoprenivorans VH2   1 1
No Yes Gordonia bronchialis DSM 43247   1 1
No Yes Rhodococcus equi 103S   1 1
No Yes Rhodococcus erythropolis PR4   3 3
No Yes Nocardia cyriacigeorgica GUH-2   1 1
No Yes Mycobacterium abscessus ATCC 19977   1 1
No Yes Mycobacterium ulcerans Agy99   1 1
No Yes Mycobacterium marinum M   2 2
No Yes Mycobacterium smegmatis str. MC2 155   1 1
No Yes Corynebacterium resistens DSM 45100   1 1
No Yes Corynebacterium glutamicum R   1 1
No Yes Corynebacterium diphtheriae NCTC 13129   1 1
No Yes Sanguibacter keddieii DSM 10542   1 1
No Yes Cellulomonas flavigena DSM 20109   2 2
No Yes Cellulomonas fimi ATCC 484   1 1
No Yes Arthrobacter phenanthrenivorans Sphe3   1 1
No Yes Arthrobacter chlorophenolicus A6   1 1
No Yes Arthrobacter aurescens TC1   1 1
No Yes Rothia dentocariosa ATCC 17931   1 1
No Yes Arthrobacter sp. Rue61a   1 1
No Yes Arthrobacter sp. FB24   2 2
No Yes Mobiluncus curtisii ATCC 43063   1 1
No Yes Herpetosiphon aurantiacus DSM 785   2 2
No Yes Roseiflexus sp. RS-1   2 2
No Yes Deinococcus gobiensis I-0   5 5
No Yes Deinococcus deserti VCD115   2 2
No Yes Deinococcus proteolyticus MRP   2 2
No Yes Deinococcus radiodurans R1   1 1
No Yes Veillonella parvula DSM 2008   3 3
No Yes Selenomonas ruminantium subsp. lactilytica TAM6421   6 6
No Yes Clostridiales genomosp. BVAB3 str. UPII9-5   3 3
No Yes Clostridium clariflavum DSM 19732   8 8
No Yes Clostridium cellulolyticum H10   3 3
No Yes Faecalibacterium prausnitzii   1 1
No Yes Ruminococcus sp.   1 1
No Yes Ruminococcus albus 7   12 12
No Yes butyrate-producing bacterium SS3/4   2 2
No Yes butyrate-producing bacterium SM4/1   2 2
No Yes Eubacterium eligens ATCC 27750   2 2
No Yes Filifactor alocis ATCC 35896   3 3
No Yes Clostridium lentocellum DSM 5427   1 1
No Yes Eubacterium rectale ATCC 33656   1 1
No Yes Coprococcus sp. ART55/1   3 3
No Yes Clostridium cellulovorans 743B   1 1
No Yes Mahella australiensis 50-1 BON   1 1
No Yes Lactobacillus casei ATCC 334   2 2
No Yes Lactobacillus crispatus ST1   1 1
No Yes Lactobacillus rhamnosus Lc 705   1 1
No Yes Lactobacillus salivarius CECT 5713   1 1
No Yes Lactobacillus sakei subsp. sakei 23K   1 1
No Yes Streptococcus sp. I-P16   4 4
No Yes Streptococcus sp. I-G2   2 2
No Yes Streptococcus parasanguinis ATCC 15912   1 1
No Yes Streptococcus suis P1/7   1 1
No Yes Streptococcus oralis Uo5   3 3
No Yes Exiguobacterium sp. MH3   4 4
No Yes Exiguobacterium sp. AT1b   2 2
No Yes Exiguobacterium sibiricum 255-15   8 8
No Yes Brevibacillus brevis NBRC 100599   12 12
No Yes Paenibacillus sp. JDR-2   1 1
No Yes Paenibacillus terrae HPL-003   6 6
No Yes Paenibacillus mucilaginosus 3016   4 4
No Yes Paenibacillus polymyxa M1   10 10
No Yes Listeria welshimeri serovar 6b str. SLCC5334   3 3
No Yes Listeria innocua Clip11262   4 4
No Yes Listeria seeligeri serovar 1/2b str. SLCC3954   2 2
No Yes Listeria monocytogenes serotype 4b str. CLIP 80459   3 3
No Yes Listeria ivanovii subsp. ivanovii PAM 55   3 3
No Yes Solibacillus silvestris StLB046   2 2
No Yes Geobacillus thermoglucosidasius C56-YS93   1 1
No Yes Lysinibacillus sphaericus C3-41   7 7
No Yes Geobacillus thermodenitrificans NG80-2   1 1
No Yes Bacillus sp. JS   4 4
No Yes Bacillus sp. 1NLA3E   1 1
No Yes Bacillus amyloliquefaciens FZB42   5 5
No Yes Bacillus atrophaeus 1942   4 4
No Yes Bacillus subtilis subsp. subtilis str. 168   7 7
No Yes Bacillus licheniformis DSM 13 = ATCC 14580   2 2
No Yes Bacillus halodurans C-125   1 1
No Yes Bacillus weihenstephanensis KBAB4   8 8
No Yes Bacillus thuringiensis str. Al Hakam   8 8
No Yes Bacillus cereus 03BB102   9 9
No Yes Bacillus anthracis str. A0248   5 5
No Yes Bacillus pseudofirmus OF4   8 8
No Yes Bacillus clausii KSM-K16   5 5
No Yes Bacillus cellulosilyticus DSM 2522   1 1
No Yes Bacillus pumilus SAFR-032   4 4
No Yes Bacillus megaterium DSM 319   5 5
No Yes Haliscomenobacter hydrossis DSM 1100   3 3
No Yes Saprospira grandis str. Lewin   3 3
No Yes Niastella koreensis GR20-10   3 3
No Yes Chitinophaga pinensis DSM 2588   13 13
No Yes Candidatus Cardinium hertigii   3 3
No Yes Cytophaga hutchinsonii ATCC 33406   1 1
No Yes Tannerella forsythia ATCC 43037   1 1
No Yes Bacteroides sp. CF50   1 1
No Yes Prevotella melaninogenica ATCC 25845   1 1
No Yes Bacteroides salanitronis DSM 18170   2 2
No Yes Bacteroides thetaiotaomicron VPI-5482   1 1
No Yes Solitalea canadensis DSM 3403   4 4
No Yes Fluviicola taffensis DSM 16823   4 3
No Yes Owenweeksia hongkongensis DSM 17368   1 1
No Yes Krokinobacter sp. 4H-3-7-5   1 1
No Yes Lacinutrix sp. 5H-3-7-4   2 2
No Yes Zobellia galactanivorans   1 1
No Yes Cellulophaga lytica DSM 7489   3 3
No Yes Capnocytophaga canimorsus Cc5   4 4
No Yes Capnocytophaga ochracea DSM 7271   1 1
No Yes Weeksella virosa DSM 16922   3 3
No Yes Flavobacterium branchiophilum FL-15   7 7
No Yes Flavobacterium columnare ATCC 49512   1 1
No Yes Flavobacterium johnsoniae UW101   10 10
No Yes Waddlia chondrophila WSU 86-1044   1 1
No Yes Candidatus Protochlamydia amoebophila UWE25   1 1
No Yes Parachlamydia acanthamoebae UV-7   1 1
No Yes Simkania negevensis Z   1 1
No Yes Isosphaera pallida ATCC 43644   1 1
No Yes Planctomyces brasiliensis DSM 5305   4 4
No Yes Planctomyces limnophilus DSM 3776   5 5
No Yes Pirellula staleyi DSM 6068   2 2
No Yes Methylacidiphilum infernorum V4   9 5
No Yes Leptospira interrogans serovar Lai str. IPAV   1 1
No Yes Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'   1 1
No Yes Brachyspira murdochii DSM 12563   1 1
No Yes Brachyspira intermedia PWS/A   1 1
No Yes Treponema azotonutricium ZAS-9   1 1
No Yes Treponema primitia ZAS-2   1 1
No Yes Treponema denticola ATCC 35405   2 2
No Yes Granulicella mallensis MP5ACTX8   1 1
No Yes Candidatus Koribacter versatilis Ellin345   1 1
No Yes Sebaldella termitidis ATCC 33386   5 5
No Yes Fusobacterium nucleatum subsp. nucleatum ATCC 25586   1 1
No Yes Campylobacter concisus 13826   1 1
No Yes Helicobacter bizzozeronii CIII-1   1 1
No Yes Helicobacter felis ATCC 49179   1 1
No Yes Helicobacter acinonychis str. Sheeba   1 1
No Yes Helicobacter pylori B38   1 1
No Yes Desulfatibacillum alkenivorans AK-01   1 1
No Yes Geobacter daltonii FRC-32   1 1
No Yes Geobacter lovleyi SZ   1 1
No Yes Sorangium cellulosum 'So ce 56'   4 4
No Yes Stigmatella aurantiaca DW4/3-1   6 6
No Yes Corallococcus coralloides DSM 2259   6 6
No Yes Myxococcus xanthus DK 1622   8 8
No Yes Myxococcus fulvus HW-1   7 7
No Yes Azoarcus sp. BH72   1 1
No Yes Dechlorosoma suillum PS   1 1
No Yes Laribacter hongkongensis HLHK9   1 1
No Yes Neisseria meningitidis alpha14   2 2
No Yes Neisseria meningitidis FAM18   2 2
No Yes Neisseria lactamica 020-06   6 6
No Yes Neisseria gonorrhoeae NCCP11945   1 1
No Yes Cupriavidus necator N-1   1 1
No Yes Ralstonia solanacearum CFBP2957   2 2
No Yes Burkholderia sp. CCGE1002   1 1
No Yes Burkholderia cenocepacia HI2424   2 2
No Yes Burkholderia gladioli BSR3   2 2
No Yes Burkholderia glumae BGR1   2 2
No Yes Delftia acidovorans SPH-1   1 1
No Yes Polaromonas sp. JS666   1 1
No Yes Variovorax paradoxus S110   1 1
No Yes Acidovorax sp. KKS102   1 1
No Yes Acidovorax citrulli AAC00-1   2 2
No Yes Acidovorax avenae subsp. avenae ATCC 19860   1 1
No Yes Comamonas testosteroni CNB-2   2 2
No Yes Taylorella equigenitalis MCE9   1 1
No Yes Maricaulis maris MCS10   1 1
No Yes Hyphomonas neptunium ATCC 15444   1 1
No Yes Jannaschia sp. CCS1   1 1
No Yes Tistrella mobilis KA081020-065   1 1
No Yes Azorhizobium caulinodans ORS 571   2 2
No Yes Methylobacterium chloromethanicum CM4   1 1
No Yes Methylobacterium extorquens AM1   1 1
No Yes Methylobacterium populi BJ001   1 1
No Yes Methylobacterium radiotolerans JCM 2831   1 1
No Yes Ochrobactrum anthropi ATCC 49188   2 2
No Yes Sinorhizobium meliloti AK83   1 1
No Yes Rhizobium etli CIAT 652   2 2
No Yes Agrobacterium radiobacter K84   2 2
No Yes Mesorhizobium ciceri biovar biserrulae WSM1271   1 1
No Yes Bradyrhizobium japonicum USDA 110   1 1
No Yes Bartonella tribocorum CIP 105476   9 9
No Yes Bartonella grahamii as4aup   18 18
No Yes Saccharophagus degradans 2-40   3 3
No Yes Teredinibacter turnerae T7901   1 1
No Yes Cellvibrio japonicus Ueda107   1 1
No Yes Pasteurella multocida subsp. multocida str. 3480   2 2
No Yes Aeromonas salmonicida subsp. salmonicida A449   2 2
No Yes Vibrio parahaemolyticus RIMD 2210633   1 1
No Yes Photobacterium profundum SS9   1 1
No Yes Psychromonas ingrahamii 37   1 1
No Yes Shewanella piezotolerans WP3   2 2
No Yes Shewanella loihica PV-4   1 1
No Yes Shewanella halifaxensis HAW-EB4   1 1
No Yes Shewanella sediminis HAW-EB3   1 1
No Yes Shewanella denitrificans OS217   1 1
No Yes Shewanella pealeana ATCC 700345   2 2
No Yes Shewanella oneidensis MR-1   1 1
No Yes Shewanella baltica OS185   1 1
No Yes Shewanella woodyi ATCC 51908   4 4
No Yes Shewanella sp. MR-4   2 2
No Yes Shewanella amazonensis SB2B   1 1
No Yes Shewanella violacea DSS12   1 1
No Yes Shewanella frigidimarina NCIMB 400   2 2
No Yes Shewanella putrefaciens CN-32   9 9
No Yes Colwellia psychrerythraea 34H   1 1
No Yes Pseudoalteromonas haloplanktis TAC125   1 1
No Yes Glaciecola sp. 4H-3-7+YE-5   2 2
No Yes Hahella chejuensis KCTC 2396   8 8
No Yes Alcanivorax borkumensis SK2   2 2
No Yes Marinomonas sp. MWYL1   1 1
No Yes Marinomonas mediterranea MMB-1   1 1
No Yes Methylomonas methanica MC09   2 2
No Yes Stenotrophomonas maltophilia K279a   4 4
No Yes Xanthomonas campestris pv. campestris str. B100   2 1
No Yes Photorhabdus asymbiotica   4 4
No Yes Photorhabdus luminescens subsp. laumondii TTO1   5 5
No Yes Xenorhabdus bovienii SS-2004   1 1
No Yes Xenorhabdus nematophila ATCC 19061   2 2
No Yes Providencia stuartii MRSN 2154   2 2
No Yes Proteus mirabilis HI4320   2 2
No Yes Yersinia pseudotuberculosis IP 31758   4 4
No Yes Yersinia pestis Pestoides F   3 3
No Yes Dickeya zeae Ech1591   2 2
No Yes Pectobacterium wasabiae WPP163   12 12
No Yes Pectobacterium sp. SCC3193   12 12
No Yes Pectobacterium atrosepticum SCRI1043   1 1
No Yes Pectobacterium carotovorum subsp. carotovorum PC1   2 2
No Yes Erwinia tasmaniensis Et1/99   1 1
No Yes Erwinia sp. Ejp617   1 1
No Yes Erwinia pyrifoliae Ep1/96   3 3
No Yes Cronobacter turicensis z3032   1 1
No Yes Cronobacter sakazakii ES15   1 1
No Yes Escherichia fergusonii ATCC 35469   3 3
No Yes Enterobacter sp. R4-368   1 1
No Yes Enterobacter cloacae subsp. dissolvens SDM   4 4
No Yes Azotobacter vinelandii DJ   1 1
No Yes Pseudomonas sp. TKP   5 5
No Yes Pseudomonas sp. UW4   1 1
No Yes Pseudomonas brassicacearum subsp. brassicacearum NFM421   3 3
No Yes Pseudomonas entomophila L48   2 2
No Yes Pseudomonas syringae pv. tomato str. DC3000   2 2
No Yes Pseudomonas stutzeri A1501   1 1
No Yes Pseudomonas fulva 12-X   1 1
No Yes Pseudomonas putida F1   1 1
No Yes Pseudomonas protegens Pf-5   7 7
No Yes Pseudomonas fluorescens SBW25   1 1
No Yes Pseudomonas mendocina ymp   1 1
No Yes Pseudomonas aeruginosa UCBPP-PA14   2 2
No Yes Pseudomonas sp. VLB120   3 3
No Yes Acinetobacter oleivorans DR1   2 2
No Yes Acinetobacter calcoaceticus PHEA-2   1 1
No Yes Natrinema sp. J7-2   3 3
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 2 2
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 1 1
No Yes Cryptococcus neoformans var. grubii H99   1 1
No Yes Cryptococcus neoformans B-3501A   1 1
No Yes Cryptococcus neoformans JEC21   1 1
No Yes Paracoccidioides brasiliensis Pb01   1 1
No Yes Paracoccidioides brasiliensis Pb03   1 1
No Yes Coccidioides posadasii str. Silveira   1 1
No Yes Coccidioides immitis RMSCC 3703   1 1
No Yes Coccidioides immitis RMSCC 2394   1 1
No Yes Coccidioides immitis H538.4   1 1
No Yes Ajellomyces dermatitidis ER-3   3 3
No Yes Histoplasma capsulatum H143   3 3
No Yes Histoplasma capsulatum H88   3 3
No Yes Histoplasma capsulatum G186AR   3 3
No Yes Aspergillus fumigatus A1163   1 1
No Yes Candida albicans WO-1   3 2
No Yes Saccharomyces cerevisiae UC5   1 1
No Yes Saccharomyces cerevisiae PW5   1 1
No Yes Saccharomyces cerevisiae CLIB324   1 1
No Yes Saccharomyces cerevisiae CBS7960   1 1
No Yes Saccharomyces cerevisiae YJM269   1 1
No Yes Saccharomyces cerevisiae T7   1 1
No Yes Saccharomyces cerevisiae FostersB   1 1
No Yes Saccharomyces cerevisiae FostersO   1 1
No Yes Saccharomyces cerevisiae VL3   1 1
No Yes Saccharomyces cerevisiae Vin13   1 1
No Yes Saccharomyces cerevisiae LalvinQA23   1 1
No Yes Saccharomyces cerevisiae AWRI796   1 1
No Yes Saccharomyces cerevisiae Sigma1278b   1 1
No Yes Saccharomyces cerevisiae W303   1 1
No Yes Saccharomyces cerevisiae JAY291   1 1
No Yes Saccharomyces cerevisiae AWRI1631   1 1
No Yes Saccharomyces cerevisiae YPS163   1 1
No Yes Saccharomyces cerevisiae M22   1 1
No Yes Saccharomyces cerevisiae CLIB215   1 1
No Yes Saccharomyces cerevisiae YJM789   1 1
No Yes Saccharomyces cerevisiae YJM789   1 1
No Yes Saccharomyces cerevisiae RM11-1a   1 1
No Yes Saccharomyces cerevisiae RM11-1a   1 1
No Yes Saccharomyces cerevisiae SGD (SGD) Baker's yeast 1 1
No Yes Schizosaccharomyces pombe 972h-   1 1
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 1 1
No Yes Hordeum vulgare 22 Domesticated barley 1 1
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 2 2
No Yes Chroococcidiopsis thermalis PCC 7203   1 1
No Yes Chamaesiphon minutus PCC 6605   1 1
No Yes Oscillatoria nigro-viridis PCC 7112   2 2
No Yes Oscillatoria acuminata PCC 6304   3 3
No Yes Cyanothece sp. PCC 7822   1 1
No Yes Cyanothece sp. PCC 7425   1 1
No Yes Cyanothece sp. PCC 7424   1 1
No Yes Cyanothece sp. ATCC 51142   1 1
No Yes Cyanobacterium aponinum PCC 10605   1 1
No Yes Cyanobacterium stanieri PCC 7202   1 1
No Yes Calothrix parietina Calothrix sp. PCC 6303   3 3
No Yes Cylindrospermum stagnale PCC 7417   1 1
No Yes Anabaena cylindrica PCC 7122   1 1
No Yes Nocardiopsis alba ATCC BAA-2165   2 2
No Yes Streptomyces albus J1074   6 6
No Yes Streptomyces rapamycinicus NRRL 5491   6 5
No Yes Streptomyces davawensis JCM 4913   10 10
No Yes Streptomyces fulvissimus DSM 40593   5 5
No Yes Streptomyces venezuelae ATCC 10712   7 7
No Yes Streptomyces collinus Tu 365   7 7
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488   6 6
No Yes Streptomyces hygroscopicus subsp. jinggangensis TL01   6 6
No Yes Saccharothrix espanaensis DSM 44229   5 5
No Yes Amycolatopsis mediterranei RB   1 1
No Yes Amycolatopsis mediterranei S699   1 1
No Yes Amycolatopsis mediterranei S699   1 1
No Yes Amycolatopsis orientalis HCCB10007   6 6
No Yes Actinoplanes friuliensis DSM 7358   4 4
No Yes Rhodococcus pyridinivorans SB3094   1 1
No Yes Rhodococcus erythropolis CCM2595   2 2
No Yes Nocardia brasiliensis ATCC 700358   2 2
No Yes Mycobacterium liflandii 128FXT   1 1
No Yes Mycobacterium smegmatis str. MC2 155   1 1
No Yes Corynebacterium glutamicum MB001   2 2
No Yes Corynebacterium glutamicum SCgG2   1 1
No Yes Corynebacterium glutamicum SCgG1   1 1
No Yes Corynebacterium glutamicum ATCC 13032   2 2
No Yes Corynebacterium glutamicum ATCC 13032   2 2
No Yes Corynebacterium glutamicum ATCC 13032   2 2
No Yes Corynebacterium diphtheriae INCA 402   1 1
No Yes Corynebacterium diphtheriae HC01   1 1
No Yes Corynebacterium diphtheriae 241   1 1
No Yes Bifidobacterium thermophilum RBL67   1 1
No Yes Actinomyces viscosus C505   3 3
No Yes Chthonomonas calidirosea T49   1 1
No Yes Deinococcus peraridilitoris DSM 19664   4 4
No Yes Ruminococcus champanellensis 18P13   1 1
No Yes Clostridium acidurici 9a   1 1
No Yes Desulfosporosinus meridiei DSM 13257   1 1
No Yes Clostridium saccharobutylicum DSM 13864   1 1
No Yes Clostridium saccharoperbutylacetonicum N1-4(HMT)   3 3
No Yes Clostridium botulinum BKT015925   1 1
No Yes Clostridium botulinum E3 str. Alaska E43   2 2
No Yes Carnobacterium maltaromaticum LMA28   1 1
No Yes Enterococcus mundtii QU 25   1 1
No Yes Lactobacillus paracasei subsp. paracasei 8700:2   1 1
No Yes Lactobacillus casei LOCK919   1 1
No Yes Lactobacillus casei str. Zhang   2 2
No Yes Lactobacillus rhamnosus LOCK908   1 1
No Yes Lactobacillus rhamnosus LOCK900   1 1
No Yes Lactobacillus rhamnosus ATCC 8530   1 1
No Yes Lactobacillus rhamnosus GG   1 1
No Yes Lactobacillus rhamnosus GG   1 1
No Yes Lactobacillus salivarius UCC118   1 1
No Yes Streptococcus oligofermentans AS 1.3089   7 7
No Yes Streptococcus parasanguinis FW213   1 1
No Yes Streptococcus mutans GS-5   1 1
No Yes Streptococcus mutans UA159   1 1
No Yes Streptococcus suis TL13   1 1
No Yes Streptococcus suis SC070731   1 1
No Yes Streptococcus suis S735   1 1
No Yes Streptococcus suis SS12   1 1
No Yes Streptococcus suis A7   1 1
No Yes Streptococcus suis JS14   1 1
No Yes Streptococcus suis BM407   1 1
No Yes Streptococcus suis SC84   1 1
No Yes Streptococcus suis GZ1   1 1
No Yes Streptococcus suis 98HAH33   1 1
No Yes Streptococcus suis 05ZYH33   1 1
No Yes Exiguobacterium antarcticum B7   3 3
No Yes Paenibacillus sp. Y412MC10   9 9
No Yes Paenibacillus mucilaginosus KNP414   3 3
No Yes Paenibacillus mucilaginosus K02   3 3
No Yes Paenibacillus polymyxa CR1   7 7
No Yes Paenibacillus polymyxa SC2   10 10
No Yes Paenibacillus polymyxa E681   9 9
No Yes Listeria monocytogenes EGD sequence   4 4
No Yes Listeria monocytogenes N53-1   1 1
No Yes Listeria monocytogenes La111   1 1
No Yes Listeria monocytogenes serotype 4b str. LL195   4 4
No Yes Listeria monocytogenes 07PF0776   4 4
No Yes Listeria monocytogenes M7   7 7
No Yes Listeria monocytogenes J1-220   2 2
No Yes Listeria monocytogenes J1816   3 3
No Yes Listeria monocytogenes SLCC2376   5 5
No Yes Listeria monocytogenes SLCC5850   4 4
No Yes Listeria monocytogenes ATCC 19117   3 3
No Yes Listeria monocytogenes L312   3 3
No Yes Listeria monocytogenes SLCC2479   3 3
No Yes Listeria monocytogenes SLCC7179   4 4
No Yes Listeria monocytogenes SLCC2540   4 4
No Yes Listeria monocytogenes SLCC2378   4 4
No Yes Listeria monocytogenes serotype 1/2b str. SLCC2755   4 4
No Yes Listeria monocytogenes serotype 1/2c str. SLCC2372   3 3
No Yes Listeria monocytogenes serotype 7 str. SLCC2482   4 4
No Yes Listeria monocytogenes 08-5578   3 3
No Yes Listeria monocytogenes 08-5923   3 3
No Yes Listeria monocytogenes L99   7 7
No Yes Listeria monocytogenes HCC23   7 7
No Yes Listeria monocytogenes 10403S   4 4
No Yes Listeria monocytogenes J0161   3 3
No Yes Listeria monocytogenes Finland 1998   4 4
No Yes Listeria monocytogenes FSL R2-561   3 3
No Yes Listeria monocytogenes serotype 4b str. F2365   4 4
No Yes Listeria monocytogenes EGD-e   3 3
No Yes Geobacillus sp. Y4.1MC1   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum sequencing   9 9
No Yes Bacillus amyloliquefaciens subsp. plantarum UCMB5033   6 6
No Yes Bacillus amyloliquefaciens subsp. plantarum AS43.3   5 5
No Yes Bacillus amyloliquefaciens subsp. plantarum YAU B9601-Y2   6 6
No Yes Bacillus amyloliquefaciens subsp. plantarum UCMB5113   5 5
No Yes Bacillus amyloliquefaciens subsp. plantarum UCMB5036   7 7
No Yes Bacillus amyloliquefaciens subsp. plantarum CAU B946   5 5
No Yes Bacillus amyloliquefaciens LFB112   5 5
No Yes Bacillus amyloliquefaciens CC178   5 5
No Yes Bacillus amyloliquefaciens Y2   6 6
No Yes Bacillus amyloliquefaciens IT-45   4 4
No Yes Bacillus amyloliquefaciens XH7   6 6
No Yes Bacillus amyloliquefaciens LL3   4 4
No Yes Bacillus amyloliquefaciens TA208   6 6
No Yes Bacillus amyloliquefaciens DSM 7   5 5
No Yes Bacillus licheniformis 9945A   6 6
No Yes Bacillus subtilis PY79   4 4
No Yes Bacillus subtilis XF-1   5 5
No Yes Bacillus subtilis QB928   7 7
No Yes Bacillus subtilis BSn5   2 2
No Yes Bacillus subtilis subsp. subtilis str. BAB-1   5 5
No Yes Bacillus subtilis subsp. subtilis str. BSP1   4 4
No Yes Bacillus subtilis subsp. subtilis str. RO-NN-1   9 9
No Yes Bacillus subtilis subsp. subtilis 6051-HGW   7 7
No Yes Bacillus subtilis subsp. spizizenii TU-B-10   7 7
No Yes Bacillus subtilis subsp. spizizenii str. W23   3 3
No Yes Bacillus subtilis subsp. natto BEST195   8 8
No Yes Bacillus licheniformis DSM 13 = ATCC 14580   2 2
No Yes Bacillus infantis NRRL B-14911   3 3
No Yes Bacillus cereus subsp. cytotoxis NVH 391-98   5 5
No Yes Bacillus toyonensis BCT-7112   6 6
No Yes Bacillus thuringiensis HD-771   11 11
No Yes Bacillus thuringiensis HD-789   10 10
No Yes Bacillus thuringiensis MC28   6 6
No Yes Bacillus thuringiensis serovar chinensis CT-43   4 4
No Yes Bacillus thuringiensis YBT-1518   4 4
No Yes Bacillus thuringiensis Bt407   3 3
No Yes Bacillus thuringiensis serovar konkukian str. 97-27   15 15
No Yes Bacillus thuringiensis serovar kurstaki str. HD73   7 7
No Yes Bacillus thuringiensis BMB171   5 5
No Yes Bacillus thuringiensis serovar finitimus YBT-020   6 6
No Yes Bacillus thuringiensis serovar thuringiensis str. IS5056   4 4
No Yes Bacillus cereus FRI-35   3 3
No Yes Bacillus cereus biovar anthracis str. CI   4 4
No Yes Bacillus cereus AH820   5 5
No Yes Bacillus cereus AH187   4 4
No Yes Bacillus cereus B4264   4 4
No Yes Bacillus cereus G9842   9 9
No Yes Bacillus cereus Q1   3 3
No Yes Bacillus cereus F837/76   8 8
No Yes Bacillus cereus NC7401   4 4
No Yes Bacillus cereus E33L   6 6
No Yes Bacillus cereus ATCC 14579   8 8
No Yes Bacillus cereus ATCC 10987   2 2
No Yes Bacillus anthracis str. H9401   6 6
No Yes Bacillus anthracis str. CDC 684   6 6
No Yes Bacillus anthracis str. 'Ames Ancestor'   6 6
No Yes Bacillus anthracis str. Sterne   5 5
No Yes Bacillus anthracis str. Ames   5 5
No Yes Bacillus anthracis str. A2012   1 1
No Yes Bacillus megaterium WSH-002   7 7
No Yes Bacillus megaterium QM B1551   7 7
No Yes Bacillus coagulans 36D1   4 4
No Yes Staphylococcus pasteuri SP1   1 1
No Yes Emticicia oligotrophica DSM 17448   1 1
No Yes Bacteroides xylanisolvens XB1A   1 1
No Yes Bacteroides fragilis NCTC 9343   7 5
No Yes Nonlabens dokdonensis DSW-6   1 1
No Yes Singulisphaera acidiphila DSM 18658   5 5
No Yes Leptospira interrogans serovar Lai str. 56601   1 1
No Yes Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130   1 1
No Yes Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'   1 1
No Yes Treponema pedis str. T A4   5 5
No Yes Fusobacterium nucleatum subsp. vincentii 3_1_36A2   1 1
No Yes Fusobacterium nucleatum subsp. animalis 4_8   2 2
No Yes Helicobacter pylori BM012S   1 1
No Yes Helicobacter pylori BM012A   1 1
No Yes Helicobacter pylori SouthAfrica20   1 1
No Yes Helicobacter pylori UM066   1 1
No Yes Helicobacter pylori UM037   1 1
No Yes Helicobacter pylori OK310   1 1
No Yes Helicobacter pylori OK113   1 1
No Yes Helicobacter pylori Rif2   1 1
No Yes Helicobacter pylori Rif1   1 1
No Yes Helicobacter pylori HUP-B14   1 1
No Yes Helicobacter pylori PeCan18   1 1
No Yes Helicobacter pylori Shi169   2 2
No Yes Helicobacter pylori Shi112   1 1
No Yes Helicobacter pylori Shi417   1 1
No Yes Helicobacter pylori XZ274   1 1
No Yes Helicobacter pylori Aklavik86   1 1
No Yes Helicobacter pylori Aklavik117   1 1
No Yes Helicobacter pylori Puno135   1 1
No Yes Helicobacter pylori Puno120   1 1
No Yes Helicobacter pylori ELS37   1 1
No Yes Helicobacter pylori Gambia94/24   1 1
No Yes Helicobacter pylori SouthAfrica7   1 1
No Yes Helicobacter pylori India7   1 1
No Yes Helicobacter pylori Lithuania75   1 1
No Yes Helicobacter pylori 2017   1 1
No Yes Helicobacter pylori 2018   1 1
No Yes Helicobacter pylori 908   1 1
No Yes Helicobacter pylori F57   1 1
No Yes Helicobacter pylori F30   1 1
No Yes Helicobacter pylori F16   1 1
No Yes Helicobacter pylori Sat464   2 2
No Yes Helicobacter pylori Cuz20   2 2
No Yes Helicobacter pylori SJM180   1 1
No Yes Helicobacter pylori B8   1 1
No Yes Helicobacter pylori v225d   2 2
No Yes Helicobacter pylori P12   1 1
No Yes Helicobacter pylori G27   1 1
No Yes Helicobacter pylori Shi470   2 2
No Yes Helicobacter pylori HPAG1   1 1
No Yes Helicobacter pylori F32   1 1
No Yes Helicobacter pylori J99   1 1
No Yes Helicobacter pylori 26695   1 1
No Yes Helicobacter pylori 26695   1 1
No Yes Geobacter sp. M18   1 1
No Yes Sorangium cellulosum So0157-2   4 4
No Yes Myxococcus stipitatus DSM 14675   8 8
No Yes Neisseria meningitidis WUE 2594   3 3
No Yes Neisseria meningitidis G2136   2 2
No Yes Neisseria meningitidis M04-240196   4 4
No Yes Neisseria meningitidis M01-240149   3 3
No Yes Neisseria meningitidis NZ-05/33   3 3
No Yes Neisseria meningitidis M01-240355   4 4
No Yes Neisseria meningitidis 8013   4 4
No Yes Neisseria meningitidis 053442   3 3
No Yes Neisseria meningitidis Z2491   3 3
No Yes Neisseria meningitidis H44/76   3 3
No Yes Neisseria meningitidis alpha710   2 2
No Yes Neisseria meningitidis MC58   3 3
No Yes Neisseria gonorrhoeae TCDC-NG08107   1 1
No Yes Neisseria gonorrhoeae FA 1090   1 1
No Yes Ralstonia solanacearum CMR15   1 1
No Yes Burkholderia lata   1 1
No Yes Burkholderia ambifaria MC40-6   2 2
No Yes Burkholderia cenocepacia MC0-3   3 3
No Yes Burkholderia cenocepacia AU 1054   1 1
No Yes Burkholderia cenocepacia J2315   1 1
No Yes Variovorax paradoxus B4   3 3
No Yes Variovorax paradoxus EPS   1 1
No Yes Taylorella equigenitalis 14/56   1 1
No Yes Taylorella equigenitalis ATCC 35865   1 1
No Yes Bordetella bronchiseptica MO149   1 1
No Yes Achromobacter xylosoxidans NBRC 15126 = ATCC 27061   1 1
No Yes Methylobacterium extorquens DM4   1 1
No Yes Methylobacterium extorquens PA1   1 1
No Yes Sinorhizobium meliloti 2011   1 1
No Yes Sinorhizobium meliloti GR4   1 1
No Yes Sinorhizobium meliloti Rm41   1 1
No Yes Sinorhizobium meliloti SM11   1 1
No Yes Sinorhizobium meliloti BL225C   1 1
No Yes Sinorhizobium meliloti 1021   1 1
No Yes Rhizobium leguminosarum bv. trifolii WSM1325   1 1
No Yes Bradyrhizobium japonicum USDA 6   1 1
No Yes Simiduia agarivorans SA1 = DSM 21679   1 1
No Yes Mannheimia succiniciproducens MBEL55E   1 1
No Yes Bibersteinia trehalosi USDA-ARS-USMARC-192   1 1
No Yes Pasteurella multocida 36950   3 3
No Yes Pasteurella multocida subsp. multocida str. HN06   1 1
No Yes Pasteurella multocida subsp. multocida str. Pm70   2 2
No Yes Vibrio nigripulchritudo VibrioScope   1 1
No Yes Shewanella sp. W3-18-1   6 6
No Yes Shewanella sp. ANA-3   1 1
No Yes Shewanella baltica BA175   1 1
No Yes Shewanella baltica OS678   2 2
No Yes Shewanella baltica OS117   2 2
No Yes Shewanella baltica OS223   1 1
No Yes Shewanella baltica OS195   2 2
No Yes Shewanella baltica OS155   2 2
No Yes Shewanella sp. MR-7   1 1
No Yes Shewanella putrefaciens 200   6 6
No Yes Glaciecola psychrophila 170   1 1
No Yes Alcanivorax dieselolei B5   2 2
No Yes Thalassolituus oleivorans MIL-1   1 1
No Yes Stenotrophomonas maltophilia D457   2 2
No Yes Stenotrophomonas maltophilia JV3   3 3
No Yes Stenotrophomonas maltophilia R551-3   1 1
No Yes Xanthomonas campestris pv. vesicatoria str. 85-10   2 1
No Yes Xanthomonas axonopodis pv. citrumelo F1   2 1
No Yes Xanthomonas campestris pv. raphani 756C   2 1
No Yes Xanthomonas campestris pv. campestris str. 8004   2 1
No Yes Yersinia pseudotuberculosis PB1/+   3 3
No Yes Yersinia pseudotuberculosis YPIII   3 3
No Yes Yersinia pseudotuberculosis IP 32953   3 3
No Yes Yersinia pestis biovar Microtus str. 91001   4 4
No Yes Yersinia pestis A1122   4 4
No Yes Yersinia pestis Z176003   4 4
No Yes Yersinia pestis D182038   4 4
No Yes Yersinia pestis D106004   4 4
No Yes Yersinia pestis biovar Medievalis str. Harbin 35   4 4
No Yes Yersinia pestis Nepal516   4 4
No Yes Yersinia pestis Antiqua   4 4
No Yes Yersinia pestis Angola   3 3
No Yes Yersinia pestis CO92   4 4
No Yes Yersinia pestis KIM10+   4 4
No Yes Serratia marcescens FGI94   3 3
No Yes Serratia liquefaciens ATCC 27592   1 1
No Yes Dickeya dadantii Ech586   3 3
No Yes Dickeya dadantii 3937   1 1
No Yes Cronobacter sakazakii CMCC 45402   3 3
No Yes Cronobacter sakazakii SP291   6 6
No Yes Cronobacter sakazakii ATCC BAA-894   3 3
No Yes Salmonella enterica subsp. enterica serovar Typhi str. Ty21a   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhi str. CT18   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhi str. Ty2   1 1
No Yes Klebsiella pneumoniae KCTC 2242   1 1
No Yes Klebsiella pneumoniae 342   1 1
No Yes Klebsiella pneumoniae subsp. pneumoniae MGH 78578   1 1
No Yes Escherichia coli E24377A   1 1
No Yes Escherichia coli E. coli PMV-1   1 1
No Yes Escherichia coli LY180   1 1
No Yes Escherichia coli O7:K1 str. CE10   1 1
No Yes Escherichia coli O104:H4 str. 2009EL-2050   1 1
No Yes Escherichia coli O104:H4 str. 2009EL-2071   1 1
No Yes Escherichia coli O104:H4 str. 2011C-3493   1 1
No Yes Escherichia coli P12b   1 1
No Yes Escherichia coli str. 'clone D i2'   1 1
No Yes Escherichia coli str. 'clone D i14'   1 1
No Yes Escherichia coli UM146   1 1
No Yes Escherichia coli IHE3034   1 1
No Yes Escherichia coli O83:H1 str. NRG 857C   1 1
No Yes Escherichia coli ABU 83972   1 1
No Yes Escherichia coli KO11FL   1 1
No Yes Escherichia coli KO11FL   1 1
No Yes Escherichia coli LF82   1 1
No Yes Escherichia coli ED1a   1 1
No Yes Escherichia coli IAI39   1 1
No Yes Escherichia coli UMN026   3 3
No Yes Escherichia coli 55989   1 1
No Yes Escherichia coli S88   1 1
No Yes Escherichia coli IAI1   1 1
No Yes Escherichia coli W   1 1
No Yes Escherichia coli W   1 1
No Yes Escherichia coli BL21(DE3)   1 1
No Yes Escherichia coli BL21(DE3)   1 1
No Yes Escherichia coli SE11   1 1
No Yes Escherichia coli APEC O1   1 1
No Yes Escherichia coli O103:H2 str. 12009   1 1
No Yes Escherichia coli UTI89   1 1
No Yes Escherichia coli 536   1 1
No Yes Escherichia coli HS   1 1
No Yes Escherichia coli ETEC H10407   1 1
No Yes Escherichia coli O26:H11 str. 11368   1 1
No Yes Escherichia coli CFT073   1 1
No Yes Escherichia coli O111:H- str. 11128   1 1
No Yes Escherichia coli B str. REL606   1 1
No Yes Enterobacter cloacae subsp. cloacae ENHKU01   1 1
No Yes Enterobacter cloacae subsp. cloacae ATCC 13047   3 3
No Yes Azotobacter vinelandii CA6   1 1
No Yes Azotobacter vinelandii CA   1 1
No Yes Pseudomonas denitrificans ATCC 13867   1 1
No Yes Pseudomonas syringae pv. phaseolicola 1448A   2 2
No Yes Pseudomonas syringae pv. syringae B728a   1 1
No Yes Pseudomonas stutzeri CCUG 29243   1 1
No Yes Pseudomonas stutzeri DSM 10701   2 2
No Yes Pseudomonas stutzeri DSM 4166   1 1
No Yes Pseudomonas stutzeri RCH2   1 1
No Yes Pseudomonas stutzeri ATCC 17588 = LMG 11199   1 1
No Yes Pseudomonas monteilii SB3101   4 4
No Yes Pseudomonas monteilii SB3078   4 4
No Yes Pseudomonas putida H8234   1 1
No Yes Pseudomonas putida HB3267   1 1
No Yes Pseudomonas putida NBRC 14164   1 1
No Yes Pseudomonas putida DOT-T1E   1 1
No Yes Pseudomonas putida S16   2 2
No Yes Pseudomonas putida BIRD-1   1 1
No Yes Pseudomonas putida W619   4 4
No Yes Pseudomonas putida ND6   1 1
No Yes Pseudomonas putida KT2440   2 2
No Yes Pseudomonas putida GB-1   1 1
No Yes Pseudomonas protegens CHA0   7 7
No Yes Pseudomonas poae RE*1-1-14   3 3
No Yes Pseudomonas fluorescens F113   2 2
No Yes Pseudomonas fluorescens A506   1 1
No Yes Pseudomonas fluorescens R124   1 1
No Yes Pseudomonas fluorescens Pf0-1   1 1
No Yes Pseudomonas resinovorans NBRC 106553   1 1
No Yes Pseudomonas mendocina NK-01   1 1
No Yes Pseudomonas aeruginosa SCV20265   2 2
No Yes Pseudomonas aeruginosa MTB-1   2 2
No Yes Pseudomonas aeruginosa LES431   2 2
No Yes Pseudomonas aeruginosa RP73   2 2
No Yes Pseudomonas aeruginosa B136-33   2 2
No Yes Pseudomonas aeruginosa PA1R   2 2
No Yes Pseudomonas aeruginosa PA1   2 2
No Yes Pseudomonas aeruginosa DK2   2 2
No Yes Pseudomonas aeruginosa NCGM2.S1   2 2
No Yes Pseudomonas aeruginosa M18   2 2
No Yes Pseudomonas aeruginosa LESB58   2 2
No Yes Pseudomonas aeruginosa PA7   3 3
No Yes Pseudomonas aeruginosa PAO1   2 2
No Yes Acinetobacter sp. SH024   2 2
No Yes Acinetobacter baumannii BJAB0715   1 1
No Yes Acinetobacter baumannii D1279779   1 1
No Yes Acinetobacter baumannii ATCC 19606   3 3
No Yes Acinetobacter baumannii AB307-0294   1 1
No Yes Acinetobacter baumannii AYE   2 2
No Yes Acinetobacter baumannii AB0057   1 1
No Yes Acinetobacter junii SH205   1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 15 15
No Yes Homo sapiens (NCBI version) Human 3 3
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 2 2
No Yes Lotus japonicus (Early assembly)   1 1
No Yes Malus x domestica (Duplicate) Apple 2 2
No Yes Ricinus communis (Early assembly) Castor bean 2 2
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   2 2
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 1 1
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 1 1
No Yes Phoenix dactylifera (Early draft) Date palm 1 1
No Yes Homo sapiens 69_37 Human 2 2
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 2 2
No Yes Gorilla gorilla 69_3.1 Western gorilla 2 2
No Yes Pongo abelii 69_2 Sumatran orangutan 1 1
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 2 2
No Yes Macaca mulatta 69_1 Rhesus monkey 2 2
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 2 2
No Yes Otolemur garnettii 69_3 Small-eared galago 2 2
No Yes Microcebus murinus 69_1 Gray mouse lemur 2 2
No Yes Rattus norvegicus 69_3.4 Norway rat 2 2
No Yes Mus musculus 69_38 House mouse 2 2
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 3 3
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 1 1
No Yes Cavia porcellus 69_3 Domestic guinea pig 2 2
No Yes Tupaia belangeri 69 Northern tree shrew 1 1
No Yes Sus scrofa 69_10.2 Pig 2 2
No Yes Bos taurus 69_3.1 Cattle 2 2
No Yes Vicugna pacos 69_1 Alpaca 1 1
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 2 2
No Yes Mustela putorius furo 69_1.0 Domestic ferret 2 2
No Yes Ailuropoda melanoleuca 69_1 Giant panda 1 1
No Yes Canis familiaris 69_3.1 Dog 2 2
No Yes Felis catus 69 Domestic cat 2 2
No Yes Equus caballus 69_2 Horse 2 2
No Yes Myotis lucifugus 69_2.0 Little brown bat 2 2
No Yes Pteropus vampyrus 69_1 Large flying fox 2 2
No Yes Sorex araneus 69_1 European shrew 1 1
No Yes Erinaceus europaeus 69 Western European hedgehog 1 1
No Yes Procavia capensis 69_1 Cape rock hyrax 1 1
No Yes Loxodonta africana 69_3 African savanna elephant 2 2
No Yes Echinops telfairi 69 Small Madagascar hedgehog 2 2
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 1 1
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 1 1
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 2 2
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 3 3
No Yes Ornithorhynchus anatinus 69_5 Platypus 1 1
No Yes Meleagris gallopavo 69_2 Turkey 1 1
No Yes Gallus gallus 69_2 Chicken 2 2
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 1 1
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 2 2
No Yes Anolis carolinensis 69_2.0 Green anole 2 2
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 1 1
No Yes Latimeria chalumnae 69_1 Coelacanth 1 1
No Yes Gadus morhua 69_1 Atlantic cod 2 2
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 2 2
No Yes Takifugu rubripes 69_4 Torafugu 1 1
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 2 2
No Yes Oryzias latipes 69_1 Japanese medaka 3 2
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 1 1
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 1 1
No Yes Danio rerio 69_9 Zebrafish 2 2
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 1 1
No Yes Ciona intestinalis 69 Vase tunicate 1 1
No Yes Saccharomyces cerevisiae 69_4 Baker's yeast 1 1
No Yes Arabidopsis thaliana 10 Thale cress 1 1
No Yes 1_050719N (meta-genome)   1 1
No Yes 2_050719S (meta-genome)   1 1
No Yes 3_050719R (meta-genome)   9 9
No Yes 4_050719Q (meta-genome)   10 10
No Yes 5_050719P (meta-genome)   6 6
No Yes Activated sludge plasmid pool Morges-2009 (Newbler) (meta-genome)   1 1
No Yes Air microbial communities Singapore indoor air filters 1 (meta-genome)   3 3
No Yes Air microbial communities Singapore indoor air filters 2 (meta-genome)   1 1
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   4 4
No Yes Combined (meta-genome)   23 23
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   25 25
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)   6 6
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   3 3
No Yes Dump bottom (Dump bottom) (meta-genome)   8 8
No Yes Dump top (Dump top) (meta-genome)   11 11
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #1 (meta-genome)   1 1
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #3 (meta-genome)   1 1
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   2 2
No Yes Fungus garden combined (combined) (meta-genome)   6 6
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   18 18
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   21 21
No Yes Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes   3 3
No Yes Guerrero Negro salt ponds hypersaline mat 06(P) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 09(Y) (meta-genome)   1 1
No Yes Hindgut microbiome of Nasutitermes sp. (Costa Rica) (meta-genome)   4 4
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome)   4 4
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome)   6 6
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome)   4 4
No Yes Human Gut Community Subject 7 (meta-genome)   4 4
No Yes Human Gut Community Subject 8 (meta-genome)   6 6
No Yes Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)   5 5
No Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome)   4 4
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   6 6
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   3 3
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   3 3
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   10 10
No Yes Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome)   1 1
No Yes Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome)   3 3
No Yes Mouse Gut Community lean1 (meta-genome)   1 1
No Yes Mouse Gut Community lean2 (meta-genome)   1 1
No Yes Mouse Gut Community ob1 (meta-genome)   1 1
No Yes Mouse Gut Community ob2 (meta-genome)   1 1
No Yes NCBI 2017_08 genome   66942 66559
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   5 5
No Yes Olavius algarvensis endosymbiont metagenome Delta1 (meta-genome)   1 1
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   10 10
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   3 3
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   5 5
No Yes Single-cell genome from subgingival tooth surface TM7a (meta-genome)   1 1
No Yes Sludge/Australian, Phrap Assembly (meta-genome)   1 1
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   13 13
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   6 6
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   12 12
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   16 16
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   7 7
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   4 4
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   9 9
No Yes STRING v9.0.5 (STRING)   807 795
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   17 17
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome)   6 6
No Yes Termite Protist Endosymbiont Community (meta-genome)   1 1
No Yes Uniprot 2018_03 genome   21688 21551
No Yes Uranium Contaminated Groundwater FW106 (meta-genome)   1 1
No Yes Global Ocean Sampling Expedition (GOS)   18 18
No Yes NCBI plasmid sequences (Plasmids)   85 85
No Yes NCBI viral sequences (Viral)   3 3
No Yes PDB chains (SCOP 1.75) (PDB)   3 3
No Yes Protein Data Bank (all PDB sequenc)   8 8
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   18 18
No Yes TargetDB (Targets)   80 78
No Yes The Salmonella enterica Pan-genome (meta-genome)   3 3
No Yes UniProt viral sequences (Viral)   3 3

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