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VPA0735-like superfamily domain assignments
in
Deinococcus geothermalis DSM 11300

Assignment details

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Deinococcus geothermalis DSM 11300 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|94984266|ref|YP_603630.1|   0.0000327   62-154   VPA0735-like  

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Select to display   Genome       Domains   Proteins
No Yes ALL   35821 35821
No Yes Oikopleura dioica   1 1
No Yes Adineta vaga   2 2
No Yes Caenorhabditis japonica   3 3
No Yes Proterospongia sp. ATCC 50818   1 1
No Yes Daldinia eschscholzii EC12 v1.0   1 1
No Yes Cryphonectria parasitica Chestnut blight fungus 1 1
No Yes Fusarium graminearum   1 1
No Yes Trichoderma virens Gv29-8   1 1
No Yes Cochliobolus miyabeanus ATCC 44560 v1.0   1 1
No Yes Cochliobolus victoriae FI3 v1.0   1 1
No Yes Cochliobolus carbonum 26-R-13 v1.0   1 1
No Yes Pyrenophora tritici-repentis   1 1
No Yes Stagonospora nodorum   1 1
No Yes Mycosphaerella graminicola IPO323   1 1
No Yes Zasmidium cellare ATCC 36951 v1.0   2 2
No Yes Dothistroma septosporum   2 2
No Yes Aspergillus acidus v1.0   1 1
No Yes Aspergillus sydowii v1.0   2 2
No Yes Aspergillus versicolor v1.0   1 1
No Yes Aspergillus terreus NIH2624   1 1
No Yes Aspergillus oryzae RIB40   2 2
No Yes Aspergillus flavus NRRL3357   2 2
No Yes Coccomyxa subellipsoidea sp. C-169 v2   1 1
No Yes Asterochloris sp. Cgr/DA1pho v1.0   1 1
No Yes Chlamydomonas reinhardtii 4.0   4 4
No Yes Symbiodinium minutum clade B1 v1.2   3 3
No Yes Emiliania huxleyi CCMP1516   4 4
No Yes Acaryochloris marina MBIC11017   1 1
No Yes Synechococcus elongatus PCC 7942   1 1
No Yes Microcystis aeruginosa NIES-843   1 1
No Yes Rivularia sp. PCC 7116   1 1
No Yes Conexibacter woesei DSM 14684   1 1
No Yes Olsenella uli DSM 7084   1 1
No Yes Nakamurella multipartita DSM 44233   3 3
No Yes Modestobacter marinus   1 1
No Yes Catenulispora acidiphila DSM 44928   1 1
No Yes Frankia sp. EAN1pec   2 2
No Yes Frankia alni ACN14a   1 1
No Yes Kitasatospora setae KM-6054   4 4
No Yes Streptomyces sp. PAMC26508   1 1
No Yes Streptomyces flavogriseus ATCC 33331   1 1
No Yes Streptomyces sp. SirexAA-E   1 1
No Yes Pseudonocardia dioxanivorans CB1190   1 1
No Yes Salinispora arenicola CNS-205   1 1
No Yes Gordonia sp. KTR9   3 3
No Yes Rhodococcus jostii RHA1   2 2
No Yes Rhodococcus equi 103S   2 2
No Yes Rhodococcus opacus B4   2 2
No Yes Rhodococcus erythropolis PR4   5 5
No Yes Nocardia cyriacigeorgica GUH-2   2 2
No Yes Nocardia farcinica IFM 10152   2 2
No Yes Mycobacterium abscessus ATCC 19977   2 2
No Yes Mycobacterium sp. JLS   4 3
No Yes Mycobacterium intracellulare ATCC 13950   1 1
No Yes Mycobacterium avium 104   2 2
No Yes Mycobacterium vanbaalenii PYR-1   3 3
No Yes Mycobacterium rhodesiae NBB3   4 4
No Yes Mycobacterium ulcerans Agy99   1 1
No Yes Mycobacterium gilvum PYR-GCK   6 6
No Yes Mycobacterium chubuense NBB4   2 2
No Yes Mycobacterium marinum M   2 2
No Yes Mycobacterium smegmatis str. MC2 155   1 1
No Yes Beutenbergia cavernae DSM 12333   1 1
No Yes Deinococcus geothermalis DSM 11300   1 1
No Yes Acetobacterium woodii DSM 1030   3 3
No Yes [Ruminococcus] torques   1 1
No Yes Roseburia intestinalis   1 1
No Yes Brevibacillus brevis NBRC 100599   1 1
No Yes Listeria welshimeri serovar 6b str. SLCC5334   3 3
No Yes Listeria innocua Clip11262   2 2
No Yes Listeria monocytogenes serotype 4b str. CLIP 80459   2 2
No Yes Listeria ivanovii subsp. ivanovii PAM 55   1 1
No Yes Niastella koreensis GR20-10   1 1
No Yes Paludibacter propionicigenes WB4   1 1
No Yes Odoribacter splanchnicus DSM 20712   1 1
No Yes Prevotella ruminicola 23   1 1
No Yes Solitalea canadensis DSM 3403   3 3
No Yes Flavobacterium johnsoniae UW101   2 2
No Yes Parachlamydia acanthamoebae UV-7   1 1
No Yes Planctomyces brasiliensis DSM 5305   4 4
No Yes Planctomyces limnophilus DSM 3776   2 2
No Yes Rhodopirellula baltica SH 1   1 1
No Yes Pirellula staleyi DSM 6068   1 1
No Yes Coraliomargarita akajimensis DSM 45221   4 4
No Yes Mesotoga prima MesG1.Ag.4.2   3 3
No Yes Candidatus Solibacter usitatus Ellin6076   1 1
No Yes Sebaldella termitidis ATCC 33386   2 2
No Yes Bdellovibrio bacteriovorus HD100   2 2
No Yes Sulfurovum sp. NBC37-1   1 1
No Yes Desulfomonile tiedjei DSM 6799   3 3
No Yes Desulfobacterium autotrophicum HRM2   2 2
No Yes Desulfomicrobium baculatum DSM 4028   1 1
No Yes Desulfovibrio magneticus RS-1   3 3
No Yes Myxococcus xanthus DK 1622   1 1
No Yes Thauera sp. MZ1T   1 1
No Yes Azoarcus sp. KH32C   1 1
No Yes Candidatus Accumulibacter phosphatis clade IIA str. UW-1   2 2
No Yes Burkholderia rhizoxinica HKI 454   1 1
No Yes Burkholderia phytofirmans PsJN   6 6
No Yes Burkholderia phymatum STM815   1 1
No Yes Burkholderia xenovorans LB400   1 1
No Yes Ralstonia eutropha JMP134   10 10
No Yes Cupriavidus taiwanensis LMG 19424   7 7
No Yes Cupriavidus metallidurans CH34   9 9
No Yes Cupriavidus necator N-1   5 5
No Yes Ralstonia eutropha H16   4 4
No Yes Ralstonia pickettii 12D   1 1
No Yes Ralstonia solanacearum CFBP2957   1 1
No Yes Burkholderia sp. RPE64   1 1
No Yes Burkholderia sp. CCGE1002   1 1
No Yes Burkholderia thailandensis E264   1 1
No Yes Burkholderia pseudomallei 1106a   1 1
No Yes Burkholderia mallei SAVP1   1 1
No Yes Burkholderia ambifaria AMMD   1 1
No Yes Burkholderia cenocepacia HI2424   1 1
No Yes Burkholderia multivorans ATCC 17616   1 1
No Yes Burkholderia vietnamiensis G4   1 1
No Yes Burkholderia gladioli BSR3   1 1
No Yes Burkholderia glumae BGR1   1 1
No Yes Verminephrobacter eiseniae EF01-2   1 1
No Yes Delftia sp. Cs1-4   2 2
No Yes Delftia acidovorans SPH-1   2 2
No Yes Comamonas testosteroni CNB-2   2 2
No Yes Janthinobacterium sp. Marseille   3 3
No Yes Bordetella petrii DSM 12804   2 2
No Yes Bordetella avium 197N   1 1
No Yes Bordetella parapertussis 12822   3 3
No Yes Bordetella bronchiseptica RB50   5 5
No Yes Achromobacter xylosoxidans A8   5 5
No Yes Achromobacter xylosoxidans   3 3
No Yes Parvularcula bermudensis HTCC2503   1 1
No Yes Caulobacter sp. K31   1 1
No Yes Caulobacter crescentus NA1000   1 1
No Yes Caulobacter segnis ATCC 21756   1 1
No Yes Phenylobacterium zucineum HLK1   1 1
No Yes Novosphingobium sp. PP1Y   2 2
No Yes Novosphingobium aromaticivorans DSM 12444   4 4
No Yes Sphingobium japonicum UT26S   1 1
No Yes Sphingomonas sp. MM-1   3 3
No Yes Sphingomonas wittichii RW1   3 3
No Yes Maricaulis maris MCS10   2 2
No Yes Hyphomonas neptunium ATCC 15444   2 2
No Yes Pseudovibrio sp. FO-BEG1   1 1
No Yes Roseobacter litoralis Och 149   1 1
No Yes Roseobacter denitrificans OCh 114   1 1
No Yes Polymorphum gilvum SL003B-26A1   1 1
No Yes Starkeya novella DSM 506   1 1
No Yes Xanthobacter autotrophicus Py2   5 5
No Yes Azorhizobium caulinodans ORS 571   2 2
No Yes Methylobacterium chloromethanicum CM4   2 2
No Yes Methylobacterium extorquens AM1   3 3
No Yes Methylobacterium sp. 4-46   4 4
No Yes Methylobacterium populi BJ001   1 1
No Yes Methylobacterium nodulans ORS 2060   3 3
No Yes Methylobacterium radiotolerans JCM 2831   1 1
No Yes Parvibaculum lavamentivorans DS-1   6 6
No Yes Ochrobactrum anthropi ATCC 49188   1 1
No Yes Brucella microti CCM 4915   1 1
No Yes Brucella pinnipedialis B2/94   1 1
No Yes Brucella canis ATCC 23365   1 1
No Yes Brucella suis ATCC 23445   1 1
No Yes Brucella melitensis ATCC 23457   1 1
No Yes Brucella ovis ATCC 25840   1 1
No Yes Brucella abortus S19   1 1
No Yes Sinorhizobium fredii NGR234   2 2
No Yes Sinorhizobium medicae WSM419   6 6
No Yes Sinorhizobium meliloti AK83   5 5
No Yes Genome sequence of Rhizobium sp. strain IRBG74   2 2
No Yes Rhizobium etli CIAT 652   2 2
No Yes Rhizobium leguminosarum bv. viciae 3841   8 8
No Yes Agrobacterium tumefaciens str. C58   1 1
No Yes Agrobacterium radiobacter K84   1 1
No Yes Agrobacterium sp. H13-3   1 1
No Yes Agrobacterium vitis S4   1 1
No Yes Mesorhizobium sp. BNC1   1 1
No Yes Mesorhizobium opportunistum WSM2075   1 1
No Yes Mesorhizobium ciceri biovar biserrulae WSM1271   1 1
No Yes Mesorhizobium loti MAFF303099   4 4
No Yes Methylocella silvestris BL2   1 1
No Yes Beijerinckia indica subsp. indica ATCC 9039   4 3
No Yes Pelagibacterium halotolerans B2   1 1
No Yes Rhodomicrobium vannielii ATCC 17100   1 1
No Yes Hyphomicrobium sp. MC1   4 4
No Yes Hyphomicrobium denitrificans ATCC 51888   4 4
No Yes Oligotropha carboxidovorans OM4   1 1
No Yes Rhodopseudomonas palustris BisA53   2 2
No Yes Nitrobacter winogradskyi Nb-255   1 1
No Yes Nitrobacter hamburgensis X14   4 4
No Yes Bradyrhizobium japonicum USDA 110   4 4
No Yes Bradyrhizobium sp. ORS 278   1 1
No Yes Methylocystis sp. SC2   1 1
No Yes Bartonella tribocorum CIP 105476   1 1
No Yes Bartonella clarridgeiae 73   1 1
No Yes Bartonella henselae str. Houston-1   2 2
No Yes Bartonella grahamii as4aup   1 1
No Yes Bartonella quintana str. Toulouse   1 1
No Yes Aliivibrio salmonicida LFI1238   1 1
No Yes Vibrio fischeri MJ11   7 7
No Yes Vibrio sp. Ex25   1 1
No Yes Vibrio harveyi ATCC BAA-1116   1 1
No Yes Vibrio parahaemolyticus RIMD 2210633   3 3
No Yes Vibrio splendidus LGP32   2 2
No Yes Vibrio vulnificus MO6-24/O   2 2
No Yes Ferrimonas balearica DSM 9799   1 1
No Yes Shewanella halifaxensis HAW-EB4   1 1
No Yes Shewanella sediminis HAW-EB3   2 2
No Yes Shewanella pealeana ATCC 700345   1 1
No Yes Colwellia psychrerythraea 34H   5 5
No Yes Nitrosococcus watsonii C-113   3 3
No Yes Legionella longbeachae NSW150   1 1
No Yes Serratia sp. AS12   1 1
No Yes Serratia plymuthica AS9   1 1
No Yes Pseudomonas sp. TKP   2 2
No Yes Pseudomonas sp. UW4   5 5
No Yes Pseudomonas stutzeri A1501   1 1
No Yes Pseudomonas protegens Pf-5   5 5
No Yes Pseudomonas fluorescens SBW25   1 1
No Yes Pseudomonas mendocina ymp   1 1
No Yes Methanocella arvoryzae MRE50   1 1
No Yes Methanocella paludicola SANAE   2 2
No Yes Methanosarcina acetivorans C2A   1 1
No Yes Methanosarcina barkeri str. Fusaro   1 1
No Yes Methanosphaerula palustris E1-9c   4 4
No Yes Methanoregula boonei 6A8   1 1
No Yes Methanospirillum hungatei JF-1   1 1
No Yes Archaeoglobus fulgidus DSM 4304   2 2
No Yes Synechococcus sp. CC9605   5 5
No Yes Synechococcus sp. WH 7803   5 5
No Yes Prochlorococcus marinus str. MIT 9313   2 2
No Yes Prochlorococcus marinus str. MIT 9303   5 4
No Yes Cyanothece sp. PCC 7822   1 1
No Yes Cyanothece sp. PCC 7425   1 1
No Yes Cyanothece sp. PCC 7424   1 1
No Yes Cyanothece sp. ATCC 51142   1 1
No Yes Frankia sp. CcI3   1 1
No Yes Streptomyces rapamycinicus NRRL 5491   2 2
No Yes Streptomyces fulvissimus DSM 40593   1 1
No Yes Rhodococcus erythropolis CCM2595   4 4
No Yes Nocardia brasiliensis ATCC 700358   1 1
No Yes Mycobacterium sp. MOTT36Y   1 1
No Yes Mycobacterium sp. JDM601   3 3
No Yes Mycobacterium abscessus subsp. bolletii 50594   2 2
No Yes Mycobacterium sp. KMS   3 3
No Yes Mycobacterium sp. MCS   3 3
No Yes Mycobacterium yongonense 05-1390   1 1
No Yes Mycobacterium intracellulare MOTT-64   1 1
No Yes Mycobacterium indicus pranii MTCC 9506   1 1
No Yes Mycobacterium intracellulare MOTT-02   1 1
No Yes Mycobacterium avium subsp. paratuberculosis MAP4   2 2
No Yes Mycobacterium avium subsp. paratuberculosis K-10   2 2
No Yes Mycobacterium gilvum Spyr1   4 4
No Yes Mycobacterium smegmatis str. MC2 155   1 1
No Yes Mycobacterium kansasii ATCC 12478   1 1
No Yes Roseburia intestinalis XB6B4   1 1
No Yes Clostridium autoethanogenum DSM 10061   1 1
No Yes Listeria monocytogenes EGD sequence   3 3
No Yes Listeria monocytogenes N53-1   3 3
No Yes Listeria monocytogenes La111   3 3
No Yes Listeria monocytogenes serotype 4b str. LL195   2 2
No Yes Listeria monocytogenes 07PF0776   2 2
No Yes Listeria monocytogenes M7   2 2
No Yes Listeria monocytogenes J1-220   2 2
No Yes Listeria monocytogenes J1816   2 2
No Yes Listeria monocytogenes SLCC2376   2 2
No Yes Listeria monocytogenes SLCC5850   3 3
No Yes Listeria monocytogenes ATCC 19117   2 2
No Yes Listeria monocytogenes L312   2 2
No Yes Listeria monocytogenes SLCC2479   3 3
No Yes Listeria monocytogenes SLCC7179   3 3
No Yes Listeria monocytogenes SLCC2540   3 3
No Yes Listeria monocytogenes SLCC2378   2 2
No Yes Listeria monocytogenes serotype 1/2b str. SLCC2755   2 2
No Yes Listeria monocytogenes serotype 1/2c str. SLCC2372   3 3
No Yes Listeria monocytogenes serotype 7 str. SLCC2482   2 2
No Yes Listeria monocytogenes 08-5578   3 3
No Yes Listeria monocytogenes 08-5923   3 3
No Yes Listeria monocytogenes L99   2 2
No Yes Listeria monocytogenes HCC23   2 2
No Yes Listeria monocytogenes 10403S   3 3
No Yes Listeria monocytogenes J0161   3 3
No Yes Listeria monocytogenes Finland 1998   3 3
No Yes Listeria monocytogenes FSL R2-561   3 3
No Yes Listeria monocytogenes serotype 4b str. F2365   2 2
No Yes Listeria monocytogenes EGD-e   3 3
No Yes Singulisphaera acidiphila DSM 18658   1 1
No Yes Bdellovibrio bacteriovorus str. Tiberius   3 3
No Yes Myxococcus stipitatus DSM 14675   2 2
No Yes Burkholderia phenoliruptrix BR3459a   1 1
No Yes Ralstonia pickettii 12J   1 1
No Yes Ralstonia solanacearum FQY_4   1 1
No Yes Ralstonia solanacearum Po82   1 1
No Yes Ralstonia solanacearum PSI07   1 1
No Yes Ralstonia solanacearum CMR15   1 1
No Yes Ralstonia solanacearum GMI1000   1 1
No Yes Burkholderia sp. YI23   1 1
No Yes Burkholderia sp. CCGE1003   2 2
No Yes Burkholderia sp. CCGE1001   3 3
No Yes Burkholderia sp. KJ006   1 1
No Yes Burkholderia thailandensis MSMB121   1 1
No Yes Burkholderia pseudomallei MSHR305   1 1
No Yes Burkholderia pseudomallei NCTC 13179   1 1
No Yes Burkholderia pseudomallei BPC006   1 1
No Yes Burkholderia pseudomallei 1026b   1 1
No Yes Burkholderia pseudomallei 668   1 1
No Yes Burkholderia pseudomallei 1710b   1 1
No Yes Burkholderia pseudomallei K96243   1 1
No Yes Burkholderia mallei NCTC 10229   1 1
No Yes Burkholderia mallei NCTC 10247   1 1
No Yes Burkholderia mallei ATCC 23344   1 1
No Yes Burkholderia lata   2 2
No Yes Burkholderia ambifaria MC40-6   1 1
No Yes Burkholderia cenocepacia MC0-3   1 1
No Yes Burkholderia cenocepacia AU 1054   1 1
No Yes Burkholderia cenocepacia J2315   1 1
No Yes Burkholderia multivorans ATCC 17616   1 1
No Yes Burkholderia cepacia GG4   1 1
No Yes Variovorax paradoxus B4   3 3
No Yes Bordetella parapertussis 18323   1 1
No Yes Bordetella parapertussis Bpp5   2 2
No Yes Bordetella bronchiseptica MO149   3 3
No Yes Bordetella bronchiseptica 253   3 3
No Yes Achromobacter xylosoxidans NBRC 15126 = ATCC 27061   3 3
No Yes Caulobacter crescentus CB15   1 1
No Yes Methylobacterium extorquens DM4   1 1
No Yes Methylobacterium extorquens PA1   2 2
No Yes Brucella canis HSK A52141   1 1
No Yes Brucella suis VBI22   1 1
No Yes Brucella suis 1330   1 1
No Yes Brucella suis 1330   1 1
No Yes Brucella melitensis NI   1 1
No Yes Brucella melitensis M5-90   1 1
No Yes Brucella melitensis M28   1 1
No Yes Brucella melitensis bv. 1 str. 16M   1 1
No Yes Brucella abortus A13334   1 1
No Yes Brucella melitensis biovar Abortus 2308   1 1
No Yes Brucella abortus bv. 1 str. 9-941   1 1
No Yes Sinorhizobium fredii USDA 257   1 1
No Yes Sinorhizobium fredii HH103   2 2
No Yes Sinorhizobium meliloti 2011   5 5
No Yes Sinorhizobium meliloti GR4   11 11
No Yes Sinorhizobium meliloti Rm41   7 7
No Yes Sinorhizobium meliloti SM11   8 8
No Yes Sinorhizobium meliloti BL225C   7 7
No Yes Sinorhizobium meliloti 1021   10 10
No Yes Rhizobium etli CFN 42   1 1
No Yes Rhizobium etli bv. mimosae str. Mim1   1 1
No Yes Rhizobium tropici CIAT 899   1 1
No Yes Rhizobium leguminosarum bv. trifolii WSM2304   1 1
No Yes Rhizobium leguminosarum bv. trifolii WSM1325   4 4
No Yes Mesorhizobium australicum WSM2073   1 1
No Yes Hyphomicrobium nitrativorans NL23   1 1
No Yes Hyphomicrobium denitrificans 1NES1   2 2
No Yes Oligotropha carboxidovorans OM5   1 1
No Yes Oligotropha carboxidovorans OM5   1 1
No Yes Rhodopseudomonas palustris DX-1   2 2
No Yes Rhodopseudomonas palustris TIE-1   2 2
No Yes Rhodopseudomonas palustris HaA2   1 1
No Yes Rhodopseudomonas palustris BisB5   2 2
No Yes Rhodopseudomonas palustris BisB18   1 1
No Yes Rhodopseudomonas palustris CGA009   2 2
No Yes Bradyrhizobium sp. S23321   7 7
No Yes Bradyrhizobium sp. BTAi1   2 2
No Yes Bradyrhizobium oligotrophicum S58   1 1
No Yes Bradyrhizobium japonicum USDA 6   7 7
No Yes Bartonella australis Aust/NH1   1 1
No Yes Bartonella vinsonii subsp. berkhoffii str. Winnie   1 1
No Yes Bartonella quintana RM-11   1 1
No Yes Vibrio fischeri ES114   7 7
No Yes Vibrio parahaemolyticus BB22OP   5 5
No Yes Vibrio vulnificus YJ016   2 2
No Yes Shewanella sp. ANA-3   1 1
No Yes Alcanivorax dieselolei B5   1 1
No Yes Serratia sp. AS13   1 1
No Yes Serratia plymuthica S13   1 1
No Yes Serratia plymuthica 4Rx13   1 1
No Yes Serratia liquefaciens ATCC 27592   1 1
No Yes Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992   2 2
No Yes Enterobacter cloacae SCF1   2 2
No Yes Enterobacter cloacae subsp. cloacae ATCC 13047   2 2
No Yes Pseudomonas denitrificans ATCC 13867   3 3
No Yes Pseudomonas putida NBRC 14164   2 2
No Yes Pseudomonas putida GB-1   5 5
No Yes Pseudomonas protegens CHA0   2 2
No Yes Pseudomonas poae RE*1-1-14   1 1
No Yes Pseudomonas fluorescens A506   1 1
No Yes Pseudomonas resinovorans NBRC 106553   7 7
No Yes Pseudomonas aeruginosa DK2   1 1
No Yes Methanobacterium sp. SWAN-1   1 1
No Yes Vibrio campbellii ATCC BAA-1116 (Duplicate of NC)   1 1
No Yes 1_Upper_euphotic (meta-genome)   2 2
No Yes 3_Below_base_of_euphotic (meta-genome)   1 1
No Yes 4_Deep_abyss (meta-genome)   1 1
No Yes Activated sludge plasmid pool Morges-2009 (Newbler) (meta-genome)   3 3
No Yes Air microbial communities Singapore indoor air filters 1 (meta-genome)   10 10
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   7 7
No Yes Combined (meta-genome)   60 60
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   12 12
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)   6 6
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   5 5
No Yes Dump bottom (Dump bottom) (meta-genome)   39 39
No Yes Dump top (Dump top) (meta-genome)   33 33
No Yes Endophytic microbiome from Rice (meta-genome)   9 9
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #1 (meta-genome)   1 1
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome)   4 4
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #3 (meta-genome)   4 4
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   6 6
No Yes Fungus garden combined (combined) (meta-genome)   9 9
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   25 25
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   36 36
No Yes Guerrero Negro salt ponds hypersaline mat 01(G) (meta-genome)   2 2
No Yes Guerrero Negro salt ponds hypersaline mat 02(H) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 04(N) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 07(S) (meta-genome)   3 3
No Yes Guerrero Negro salt ponds hypersaline mat 10(Z) (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome)   2 2
No Yes Human Gut Community Subject 7 (meta-genome)   1 1
No Yes Human Gut Community Subject 8 (meta-genome)   2 2
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   19 19
No Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome)   19 19
No Yes Marine anammox bioreactor enriched for Scalindua species (meta-genome)   3 3
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   63 63
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   17 17
No Yes Methylotrophic community from Lake Washington sediment Formate enrichment (meta-genome)   12 12
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   13 13
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   19 19
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)   6 6
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   29 29
No Yes Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome)   15 15
No Yes Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome)   5 5
No Yes NCBI 2017_08 genome   24367 24221
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   11 11
No Yes Olavius algarvensis endosymbiont metagenome Delta1 (meta-genome)   5 5
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   9 9
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   11 11
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   17 17
No Yes Sludge/Australian, Phrap Assembly (meta-genome)   3 3
No Yes Sludge/US, Jazz Assembly (meta-genome)   10 10
No Yes Sludge/US, Phrap Assembly (meta-genome)   17 17
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   20 20
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   137 137
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   17 17
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   4 4
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   7 7
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   100 100
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   98 98
No Yes Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)   7 7
No Yes STRING v9.0.5 (STRING)   399 396
No Yes Switchgrass field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing switchgr (meta-genome)   12 12
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   73 73
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome)   5 5
No Yes Uniprot 2018_03 genome   8214 8108
No Yes Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)   5 5
No Yes Global Ocean Sampling Expedition (GOS)   281 281
No Yes NCBI plasmid sequences (Plasmids)   61 61
No Yes PDB chains (SCOP 1.75) (PDB)   1 1
No Yes Protein Data Bank (all PDB sequenc)   9 9
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   42 42
No Yes TargetDB (Targets)   41 41
No Yes The Salmonella enterica Pan-genome (meta-genome)   2 2

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