SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.


Api92-like superfamily domain assignments
in
Clostridium perfringens ATCC 13124

Network of domain occurrence in all genomes



No domain assignments for these genomes.


Add assignments from groups of genomes

View all assignments containing a Api92-like domain in each group of genomes.

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes ]


Add assignments from individual genomes

Select additional genomes you would like to see domain assignments for, then click 'Submit'.

Select to display   Genome       Domains   Proteins
No Yes ALL   9749 9749
No Yes Amphimedon queenslandica   1 1
No Yes Eubacterium siraeum   1 1
No Yes Ruminococcus albus 7   1 1
No Yes Clostridium kluyveri DSM 555   1 1
No Yes Deferribacter desulfuricans SSM1   1 1
No Yes Neisseria gonorrhoeae NCCP11945   1 1
No Yes Gallibacterium anatis UMN179   1 1
No Yes Haemophilus ducreyi 35000HP   1 1
No Yes Photorhabdus asymbiotica   1 1
No Yes Photorhabdus luminescens subsp. laumondii TTO1   2 2
No Yes Xenorhabdus bovienii SS-2004   2 2
No Yes Xenorhabdus nematophila ATCC 19061   2 2
No Yes Proteus mirabilis HI4320   1 1
No Yes Edwardsiella ictaluri 93-146   1 1
No Yes Yersinia pseudotuberculosis IP 31758   1 1
No Yes Yersinia enterocolitica subsp. enterocolitica 8081   1 1
No Yes Serratia sp. ATCC 39006   1 1
No Yes Serratia proteamaculans 568   3 3
No Yes Pantoea sp. At-9b   1 1
No Yes Erwinia sp. Ejp617   2 2
No Yes Erwinia billingiae Eb661   1 1
No Yes Erwinia pyrifoliae Ep1/96   2 2
No Yes Erwinia amylovora ATCC 49946   1 1
No Yes Shigella dysenteriae Sd197   1 1
No Yes Clostridium kluyveri NBRC 12016   1 1
No Yes Acidithiobacillus ferrooxidans ATCC 23270   1 1
No Yes Yersinia pestis Z176003   1 1
No Yes Serratia plymuthica S13   1 1
No Yes Pantoea ananatis LMG 5342   1 1
No Yes Pantoea ananatis PA13   1 1
No Yes Pantoea ananatis AJ13355   1 1
No Yes Erwinia pyrifoliae DSM 12163   2 2
No Yes Shigella flexneri 2002017   1 1
No Yes Shigella flexneri 2a str. 301   1 1
No Yes Salmonella enterica subsp. enterica Serovar Cubana str. CFSAN002050   1 1
No Yes Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. U288   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344   1 1
No Yes Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7   1 1
No Yes Salmonella enterica subsp. enterica Serovar Heidelberg str. CFSAN002069   1 1
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. 41578   1 1
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. SL476   1 1
No Yes Escherichia coli E24377A   4 4
No Yes Escherichia coli E. coli PMV-1   2 2
No Yes Escherichia coli O104:H4 str. 2011C-3493   1 1
No Yes Escherichia coli UM146   1 1
No Yes Escherichia coli Xuzhou21   1 1
No Yes Escherichia coli UMNK88   3 3
No Yes Escherichia coli KO11FL   1 1
No Yes Escherichia coli KO11FL   1 1
No Yes Escherichia coli ED1a   2 2
No Yes Escherichia coli UMN026   1 1
No Yes Escherichia coli W   1 1
No Yes Escherichia coli W   1 1
No Yes Escherichia coli SE15   1 1
No Yes Escherichia coli SE11   2 2
No Yes Escherichia coli UTI89   1 1
No Yes Escherichia coli ETEC H10407   2 2
No Yes Escherichia coli O55:H7 str. RM12579   1 1
No Yes Escherichia coli O55:H7 str. CB9615   1 1
No Yes Escherichia coli O26:H11 str. 11368   2 2
No Yes Escherichia coli O157:H7 str. TW14359   1 1
No Yes Escherichia coli O157:H7 str. EC4115   1 1
No Yes Escherichia coli O157:H7 str. Sakai   1 1
No Yes Escherichia coli O157:H7 str. EDL933   1 1
No Yes Enterobacter cloacae subsp. cloacae ATCC 13047   1 1
No Yes Pseudomonas fluorescens A506   1 1
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   6 6
No Yes Combined (meta-genome)   10 10
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   4 4
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)   3 3
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   1 1
No Yes Dump top (Dump top) (meta-genome)   1 1
No Yes Fungus garden combined (combined) (meta-genome)   6 6
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   6 6
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   4 4
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   1 1
No Yes NCBI 2017_08 genome   8539 8537
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   2 2
No Yes STRING v9.0.5 (STRING)   38 38
No Yes Uniprot 2018_03 genome   821 821
No Yes Global Ocean Sampling Expedition (GOS)   61 61
No Yes NCBI plasmid sequences (Plasmids)   113 113
No Yes NCBI viral sequences (Viral)   2 2
No Yes PDB chains (SCOP 1.75) (PDB)   1 1
No Yes Protein Data Bank (all PDB sequenc)   1 1
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   7 5
No Yes TargetDB (Targets)   2 2
No Yes The Salmonella enterica Pan-genome (meta-genome)   4 4
No Yes UniProt viral sequences (Viral)   2 2

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]