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Api92-like superfamily domain assignments
in
Synechocystis sp. PCC 6803

Network of domain occurrence in all genomes



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Select to display   Genome       Domains   Proteins
No Yes ALL   9749 9749
No Yes Amphimedon queenslandica   1 1
No Yes Eubacterium siraeum   1 1
No Yes Ruminococcus albus 7   1 1
No Yes Clostridium kluyveri DSM 555   1 1
No Yes Deferribacter desulfuricans SSM1   1 1
No Yes Neisseria gonorrhoeae NCCP11945   1 1
No Yes Gallibacterium anatis UMN179   1 1
No Yes Haemophilus ducreyi 35000HP   1 1
No Yes Photorhabdus asymbiotica   1 1
No Yes Photorhabdus luminescens subsp. laumondii TTO1   2 2
No Yes Xenorhabdus bovienii SS-2004   2 2
No Yes Xenorhabdus nematophila ATCC 19061   2 2
No Yes Proteus mirabilis HI4320   1 1
No Yes Edwardsiella ictaluri 93-146   1 1
No Yes Yersinia pseudotuberculosis IP 31758   1 1
No Yes Yersinia enterocolitica subsp. enterocolitica 8081   1 1
No Yes Serratia sp. ATCC 39006   1 1
No Yes Serratia proteamaculans 568   3 3
No Yes Pantoea sp. At-9b   1 1
No Yes Erwinia sp. Ejp617   2 2
No Yes Erwinia billingiae Eb661   1 1
No Yes Erwinia pyrifoliae Ep1/96   2 2
No Yes Erwinia amylovora ATCC 49946   1 1
No Yes Shigella dysenteriae Sd197   1 1
No Yes Clostridium kluyveri NBRC 12016   1 1
No Yes Acidithiobacillus ferrooxidans ATCC 23270   1 1
No Yes Yersinia pestis Z176003   1 1
No Yes Serratia plymuthica S13   1 1
No Yes Pantoea ananatis LMG 5342   1 1
No Yes Pantoea ananatis PA13   1 1
No Yes Pantoea ananatis AJ13355   1 1
No Yes Erwinia pyrifoliae DSM 12163   2 2
No Yes Shigella flexneri 2002017   1 1
No Yes Shigella flexneri 2a str. 301   1 1
No Yes Salmonella enterica subsp. enterica Serovar Cubana str. CFSAN002050   1 1
No Yes Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. U288   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344   1 1
No Yes Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7   1 1
No Yes Salmonella enterica subsp. enterica Serovar Heidelberg str. CFSAN002069   1 1
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. 41578   1 1
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. SL476   1 1
No Yes Escherichia coli E24377A   4 4
No Yes Escherichia coli E. coli PMV-1   2 2
No Yes Escherichia coli O104:H4 str. 2011C-3493   1 1
No Yes Escherichia coli UM146   1 1
No Yes Escherichia coli Xuzhou21   1 1
No Yes Escherichia coli UMNK88   3 3
No Yes Escherichia coli KO11FL   1 1
No Yes Escherichia coli KO11FL   1 1
No Yes Escherichia coli ED1a   2 2
No Yes Escherichia coli UMN026   1 1
No Yes Escherichia coli W   1 1
No Yes Escherichia coli W   1 1
No Yes Escherichia coli SE15   1 1
No Yes Escherichia coli SE11   2 2
No Yes Escherichia coli UTI89   1 1
No Yes Escherichia coli ETEC H10407   2 2
No Yes Escherichia coli O55:H7 str. RM12579   1 1
No Yes Escherichia coli O55:H7 str. CB9615   1 1
No Yes Escherichia coli O26:H11 str. 11368   2 2
No Yes Escherichia coli O157:H7 str. TW14359   1 1
No Yes Escherichia coli O157:H7 str. EC4115   1 1
No Yes Escherichia coli O157:H7 str. Sakai   1 1
No Yes Escherichia coli O157:H7 str. EDL933   1 1
No Yes Enterobacter cloacae subsp. cloacae ATCC 13047   1 1
No Yes Pseudomonas fluorescens A506   1 1
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   6 6
No Yes Combined (meta-genome)   10 10
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   4 4
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)   3 3
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   1 1
No Yes Dump top (Dump top) (meta-genome)   1 1
No Yes Fungus garden combined (combined) (meta-genome)   6 6
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   6 6
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   4 4
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   1 1
No Yes NCBI 2017_08 genome   8539 8537
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   2 2
No Yes STRING v9.0.5 (STRING)   38 38
No Yes Uniprot 2018_03 genome   821 821
No Yes Global Ocean Sampling Expedition (GOS)   61 61
No Yes NCBI plasmid sequences (Plasmids)   113 113
No Yes NCBI viral sequences (Viral)   2 2
No Yes PDB chains (SCOP 1.75) (PDB)   1 1
No Yes Protein Data Bank (all PDB sequenc)   1 1
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   7 5
No Yes TargetDB (Targets)   2 2
No Yes The Salmonella enterica Pan-genome (meta-genome)   4 4
No Yes UniProt viral sequences (Viral)   2 2

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