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Photosystem II 10 kDa phosphoprotein PsbH superfamily domain assignments
in
all genomes

Assignment details

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25 selected genomes have 48 significant domains in 48 proteins.

Showing genomes 1 to 25 of 127
  1 2 3 4 5 6   Next Last

Selaginella moellendorffii has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
jgi|Selmo1|187629|estExt_Genewise1Plus.C_1750167   1.31e-22   20-79   PsbH-like  

Eucalyptus grandis v201 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
Eucgr.B01572.1|PACid:23566733   1.7e-29   10-69   PsbH-like  
Eucgr.F03245.1|PACid:23584292   3.79e-28   14-73   PsbH-like  
 
Weak hits:
Eucgr.J01638.1|PACid:23599627   0.068   49-83   PsbH-like  

Theobroma cacao B97-61/B2 v1 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
Tc06_g005690   8.11e-22   194-244   PsbH-like  
 
Weak hits:
Tc04_g003970   0.000209   1-22   PsbH-like  

Gossypium raimondii v221 has 4 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
Gorai.005G110300.1|PACid:26803071   1.06e-25   15-68   PsbH-like  
Gorai.005G164900.1|PACid:26802761   4.84e-26   14-73   PsbH-like  
Gorai.008G286600.1|PACid:26819259   3.14e-27   14-73   PsbH-like  
Gorai.010G031500.1|PACid:26757355   2.09e-29   14-73   PsbH-like  

Capsella rubella v183 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
Carubv10003237m|PACid:20909067   5.23e-29   14-73   PsbH-like  

Arabidopsis lyrata has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
jgi|Araly1|475557|fgenesh2_kg.2__687__ATCG00710.1   6.28e-29   14-73   PsbH-like  
jgi|Araly1|475609|fgenesh2_kg.2__739__ATCG00710.1   6.28e-29   14-73   PsbH-like  

Arabidopsis thaliana 10 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
ATCG00710.1   6.28e-29   14-73   PsbH-like  

Medicago truncatula has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
Medtr1g007850.1   0.0000000012   20-50   PsbH-like  
Medtr2g062930.1   6.8e-25   14-66   PsbH-like  
Medtr4g051375.1   3.4e-18   14-54   PsbH-like  

Malus domestica v196 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
MDP0000363098|PACid:22626842   0.000000314   15-38   PsbH-like  

Mimulus guttatus v140 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
mgv11b021836m|PACid:17688754   9.42e-24   14-63   PsbH-like  

Solanum lycopersicum v.2.3 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
Solyc01g007520.2.1   1.1e-29   14-73   PsbH-like  

Aquilegia coerulea v195 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
Aquca_044_00090.1|PACid:22060567   1.7e-29   14-73   PsbH-like  

Triticum urartu 22 has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
TRIUR3_00327-P1   9.81e-29   14-72   PsbH-like  
TRIUR3_06585-P1   3.14e-27   14-70   PsbH-like  
TRIUR3_23545-P1   3.14e-27   14-70   PsbH-like  

Triticum aestivum 22 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
Traes_2DL_17A4523CD.1   2.22e-22   20-72   PsbH-like  

Brachypodium distachyon has 4 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
EG:BRADI1G05735.1   3.53e-27   14-70   PsbH-like  
EG:BRADI1G65955.1   1.07e-26   14-70   PsbH-like  
EG:BRADI2G36785.1   4.84e-26   14-70   PsbH-like  
EG:BRADI5G09696.1   3.53e-27   14-70   PsbH-like  

Oryza glaberrima has 6 significant domains in 6 proteins.

     

Sequence ID   Evalue   Region   Family  
ORGLA03G0399600.1   2.09e-28   17-75   PsbH-like  
ORGLA06G0239800.1   2.09e-28   17-75   PsbH-like  
ORGLA06G0269400.1   2.09e-28   17-75   PsbH-like  
ORGLA08G0205900.1   2.09e-28   17-75   PsbH-like  
ORGLA10G0153900.1   2.09e-28   17-75   PsbH-like  
ORGLA11G0191600.1   2.09e-28   17-75   PsbH-like  

Oryza brachyantha 22 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
OB09G15620.1   0.00000000000000106   14-51   PsbH-like  

Oryza sativa ssp. japonica 5.0 has 4 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
LOC_Os04g16848.1|13104.m11749|protein   1.83e-28   14-72   PsbH-like  
LOC_Os06g39704.1|13106.m10446|protein   1.83e-28   14-72   PsbH-like  
LOC_Os08g15296.1|13108.m09262|protein   2.09e-28   17-75   PsbH-like  
LOC_Os10g21322.1|13110.m07717|protein   2.48e-27   14-72   PsbH-like  

Oryza sativa v193 has 4 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
LOC_Os04g16848.1|PACid:21893472   1.83e-28   14-72   PsbH-like  
LOC_Os06g39704.1|PACid:21929426   1.83e-28   14-72   PsbH-like  
LOC_Os08g15296.1|PACid:21888975   2.09e-28   17-75   PsbH-like  
LOC_Os10g21322.1|PACid:21883528   2.48e-27   14-72   PsbH-like  

Setaria italica v164 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
Si024102m|PACid:19700673   0.00000000000575   15-46   PsbH-like  

Zea mays v181 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
GRMZM5G831399_T01|PACid:20871659   2.62e-27   14-70   PsbH-like  
 
Weak hits:
GRMZM2G101042_T03|PACid:20854076   0.0876   39-75   PsbH-like  

Sorghum bicolor has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
jgi|Sorbi1|5035849|Sb03g017590   2.62e-27   14-70   PsbH-like  
 
Weak hits:
jgi|Sorbi1|5053529|Sb03g031380   0.0327   40-84   PsbH-like  

Physcomitrella patens has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
jgi|Phypa1_1|119144|e_gw1.27.122.1   2.22e-29   15-74   PsbH-like  

Coccomyxa subellipsoidea sp. C-169 v2 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
jgi|Coc_C169_1|21085|e_gw1.30.18.1   3.27e-28   17-73   PsbH-like  

Asterochloris sp. Cgr/DA1pho v1.0 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
jgi|Astpho1|17749|gw1.00130.107.1   1.01e-27   2-56   PsbH-like  

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Showing genomes 1 to 25 of 127

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Select to display   Genome       Domains   Proteins
No Yes ALL   6451 6451
No Yes Selaginella moellendorffii   1 1
No Yes Eucalyptus grandis v201 Rose gum 2 2
No Yes Theobroma cacao B97-61/B2 v1 Cacao 1 1
No Yes Gossypium raimondii v221   4 4
No Yes Capsella rubella v183   1 1
No Yes Arabidopsis lyrata Lyrate rockcress 2 2
No Yes Arabidopsis thaliana 10 Thale cress 1 1
No Yes Medicago truncatula Barrel medic 3 3
No Yes Malus domestica v196 Apple 1 1
No Yes Mimulus guttatus v140 Spotted monkey flower 1 1
No Yes Solanum lycopersicum v.2.3 Tomato 1 1
No Yes Aquilegia coerulea v195   1 1
No Yes Triticum urartu 22   3 3
No Yes Triticum aestivum 22 Bread wheat 1 1
No Yes Brachypodium distachyon Stiff brome 4 4
No Yes Oryza glaberrima African rice 6 6
No Yes Oryza brachyantha 22 Malo sina 1 1
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 4 4
No Yes Oryza sativa v193 Rice 4 4
No Yes Setaria italica v164 Foxtail millet 1 1
No Yes Zea mays v181 Maize 1 1
No Yes Sorghum bicolor Sorghum 1 1
No Yes Physcomitrella patens   1 1
No Yes Coccomyxa subellipsoidea sp. C-169 v2   1 1
No Yes Asterochloris sp. Cgr/DA1pho v1.0   1 1
No Yes Chlorella vulgaris   1 1
No Yes Volvox carteri f. nagariensis   1 1
No Yes Bathycoccus prasinos   1 1
No Yes Cyanidioschyzon merolae strain 10D 22   1 1
No Yes Cyanidioschyzon merolae   1 1
No Yes Thalassiosira pseudonana CCMP1335   1 1
No Yes Symbiodinium minutum clade B1 v1.2   7 7
No Yes Leptolyngbya sp. PCC 7376   1 1
No Yes Pseudanabaena sp. PCC 7367   1 1
No Yes Acaryochloris marina MBIC11017   1 1
No Yes Synechocystis sp. PCC 6803   1 1
No Yes Thermosynechococcus sp. NK55   1 1
No Yes Thermosynechococcus elongatus BP-1   1 1
No Yes Synechococcus sp. PCC 7502   1 1
No Yes Synechococcus sp. PCC 6312   1 1
No Yes Synechococcus sp. CC9311   1 1
No Yes Synechococcus elongatus PCC 7942   1 1
No Yes Prochlorococcus marinus str. MIT 9515   1 1
No Yes Microcoleus sp. PCC 7113   1 1
No Yes Trichodesmium erythraeum IMS101   1 1
No Yes Geitlerinema sp. PCC 7407   1 1
No Yes Cyanothece sp. PCC 8802   1 1
No Yes Gloeocapsa sp. PCC 7428   1 1
No Yes Halothece sp. PCC 7418   1 1
No Yes Microcystis aeruginosa NIES-843   1 1
No Yes Gloeobacter violaceus PCC 7421   1 1
No Yes Rivularia sp. PCC 7116   1 1
No Yes Calothrix sp. PCC 7507   1 1
No Yes Anabaena variabilis ATCC 29413   1 1
No Yes 'Nostoc azollae' 0708   1 1
No Yes Nostoc sp. PCC 7107   1 1
No Yes Nostoc punctiforme PCC 73102   1 1
No Yes Nostoc sp. PCC 7120   1 1
No Yes Nostoc sp. PCC 7524   1 1
No Yes Anabaena sp. 90   1 1
No Yes Chroococcidiopsis thermalis PCC 7203   2 2
No Yes Chamaesiphon minutus PCC 6605   1 1
No Yes Synechocystis sp. PCC 6803 substr. PCC-P   1 1
No Yes Synechocystis sp. PCC 6803 substr. PCC-N   1 1
No Yes Synechocystis sp. PCC 6803 substr. GT-I   1 1
No Yes Synechocystis sp. PCC 6803   1 1
No Yes Cyanobium gracile PCC 6307   1 1
No Yes Dactylococcopsis salina PCC 8305   1 1
No Yes Synechococcus sp. JA-2-3B'a(2-13)   1 1
No Yes Synechococcus sp. JA-3-3Ab   1 1
No Yes Synechococcus sp. CC9902   1 1
No Yes Synechococcus sp. RCC307   1 1
No Yes Synechococcus sp. CC9605   1 1
No Yes Synechococcus sp. WH 8102   1 1
No Yes Synechococcus sp. WH 7803   1 1
No Yes Synechococcus sp. PCC 7002   1 1
No Yes Synechococcus elongatus PCC 6301   1 1
No Yes Prochlorococcus marinus str. NATL1A   1 1
No Yes Prochlorococcus marinus str. MIT 9301   1 1
No Yes Prochlorococcus marinus str. AS9601   1 1
No Yes Prochlorococcus marinus subsp. marinus str. CCMP1375   1 1
No Yes Prochlorococcus marinus subsp. pastoris str. CCMP1986   1 1
No Yes Prochlorococcus marinus str. MIT 9215   1 1
No Yes Prochlorococcus marinus str. MIT 9211   1 1
No Yes Prochlorococcus marinus str. MIT 9313   1 1
No Yes Prochlorococcus marinus str. MIT 9312   1 1
No Yes Prochlorococcus marinus str. MIT 9303   1 1
No Yes Prochlorococcus marinus str. NATL2A   1 1
No Yes Crinalium epipsammum PCC 9333   1 1
No Yes Oscillatoria nigro-viridis PCC 7112   1 1
No Yes Oscillatoria acuminata PCC 6304   1 1
No Yes Arthrospira platensis NIES-39   1 1
No Yes Cyanothece sp. PCC 7822   1 1
No Yes Cyanothece sp. PCC 7425   1 1
No Yes Cyanothece sp. PCC 7424   1 1
No Yes Cyanothece sp. ATCC 51142   1 1
No Yes Cyanothece sp. PCC 8801   1 1
No Yes Cyanobacterium aponinum PCC 10605   1 1
No Yes Cyanobacterium stanieri PCC 7202   1 1
No Yes Gloeobacter kilaueensis Gloeobacter sp. JS   1 1
No Yes Pleurocapsa minor Pleurocapsa sp. PCC 7327   2 2
No Yes Stanieria cyanosphaera PCC 7437   1 1
No Yes Calothrix parietina Calothrix sp. PCC 6303   1 1
No Yes Cylindrospermum stagnale PCC 7417   1 1
No Yes Anabaena cylindrica PCC 7122   1 1
No Yes Malus x domestica (Duplicate) Apple 1 1
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 1 1
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 1 1
No Yes Guillardia theta (nucleomorph)   1 1
No Yes Arabidopsis thaliana 10 Thale cress 1 1
No Yes 2_Base_of_chrolophyll_max (meta-genome)   1 1
No Yes 4_050719Q (meta-genome)   3 3
No Yes 5_050719P (meta-genome)   1 1
No Yes 6_Upper_euphotic (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 01(G) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   3 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   4 4
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome)   2 2
No Yes NCBI 2017_08 genome   444 444
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   2 2
No Yes STRING v9.0.5 (STRING)   58 58
No Yes Uniprot 2018_03 genome   5376 5373
No Yes Global Ocean Sampling Expedition (GOS)   75 75
No Yes PDB chains (SCOP 1.75) (PDB)   1 1
No Yes Protein Data Bank (all PDB sequenc)   83 83
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   128 128

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