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Photosystem II reaction center protein K, PsbK superfamily domain assignments
in
all eukaryotic genomes

Assignment details

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25 selected genomes have 98 significant domains in 98 proteins.

Showing genomes 1 to 25 of 27
  1 2   Next Last

Selaginella moellendorffii has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
jgi|Selmo1|137749|e_gw1.175.142.1   0.0000000000000811   17-53   PsbK-like  

Theobroma cacao B97-61/B2 v1 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
Tc04_g003650   0.000000706   1-20   PsbK-like  

Gossypium raimondii v221 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
Gorai.009G320900.1|PACid:26761976   4.84e-16   25-61   PsbK-like  

Arabidopsis lyrata has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
jgi|Araly1|893981|scaffold_201055.1   2.88e-17   25-61   PsbK-like  

Arabidopsis thaliana 10 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
ATCG00070.1   2.75e-17   25-61   PsbK-like  

Medicago truncatula has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
Medtr4g019000.1   0.00000209   27-51   PsbK-like  
Medtr4g050880.1   2.62e-17   25-61   PsbK-like  

Glycine max v109 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
Glyma15g39780.1|PACid:16300554   1.83e-17   28-64   PsbK-like  

Populus trichocarpa v156 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
POPTR_0104s00240.1|PACid:18221914   0.00000000000000248   18-54   PsbK-like  

Vitis vinifera has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
GSVIVT01037458001   0.0000000000000353   25-56   PsbK-like  

Aquilegia coerulea v195 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
Aquca_064_00058.1|PACid:22062013   4.18e-17   25-61   PsbK-like  

Triticum urartu 22 has 6 significant domains in 6 proteins.

     

Sequence ID   Evalue   Region   Family  
TRIUR3_00150-P1   0.00000000000000131   82-118   PsbK-like  
TRIUR3_02005-P1   3.92e-17   82-118   PsbK-like  
TRIUR3_09786-P1   3.92e-17   82-118   PsbK-like  
TRIUR3_12842-P1   3.92e-17   82-118   PsbK-like  
TRIUR3_15150-P1   3.92e-17   82-118   PsbK-like  
TRIUR3_18625-P1   0.00000667   78-99   PsbK-like  

Triticum aestivum 22 has 56 significant domains in 56 proteins.

     

Sequence ID   Evalue   Region   Family  
Traes_1AL_DF690B97B.1   7.32e-18   25-61   PsbK-like  
Traes_1AS_DF690B97B.1   7.32e-18   25-61   PsbK-like  
Traes_1BL_DF690B97B.1   7.32e-18   25-61   PsbK-like  
Traes_1BS_DF690B97B.1   7.32e-18   25-61   PsbK-like  
Traes_1DL_DF690B97B.1   7.32e-18   25-61   PsbK-like  
Traes_1DL_DF690B97B1.1   7.32e-18   25-61   PsbK-like  
Traes_1DL_EA6883F18.1   8.63e-16   25-61   PsbK-like  
Traes_2AL_DF690B97B.1   7.32e-18   25-61   PsbK-like  
Traes_2AS_49D6010DA.1   4.05e-17   25-61   PsbK-like  
Traes_2BL_36BF676FD.1   2.35e-16   25-61   PsbK-like  
Traes_2BL_36BF676FD1.1   2.35e-16   25-61   PsbK-like  
Traes_2BS_DF690B97B.1   7.32e-18   25-61   PsbK-like  
Traes_2DL_AEBBC1D8D.1   7.32e-18   25-61   PsbK-like  
Traes_2DL_AEBBC1D8D1.1   7.32e-18   25-61   PsbK-like  
Traes_2DL_DF690B97B.1   7.32e-18   25-61   PsbK-like  
Traes_2DS_A31FA5562.1   0.000000183   25-54   PsbK-like  
Traes_2DS_DF690B97B.1   7.32e-18   25-61   PsbK-like  
Traes_2DS_DF690B97B1.1   7.32e-18   25-61   PsbK-like  
Traes_2DS_DF690B97B2.1   7.32e-18   25-61   PsbK-like  
Traes_3AS_DF690B97B.1   7.32e-18   25-61   PsbK-like  
Traes_3B_DF690B97B.1   7.32e-18   25-61   PsbK-like  
Traes_3DL_DF690B97B.1   7.32e-18   25-61   PsbK-like  
Traes_3DL_DF690B97B1.1   7.32e-18   25-61   PsbK-like  
Traes_3DS_DF690B97B.1   7.32e-18   25-61   PsbK-like  
Traes_4AL_DF690B97B.1   7.32e-18   25-61   PsbK-like  
Traes_4AS_CCF802EF7.1   2.62e-16   25-60   PsbK-like  
Traes_4AS_DF690B97B.1   7.32e-18   25-61   PsbK-like  
Traes_4AS_DF690B97B1.1   7.32e-18   25-61   PsbK-like  
Traes_4BL_DF690B97B.1   7.32e-18   25-61   PsbK-like  
Traes_4BS_DF690B97B.1   7.32e-18   25-61   PsbK-like  
Traes_4DL_39159EFE0.1   0.00000000000157   25-61   PsbK-like  
Traes_4DL_DF690B97B.1   7.32e-18   25-61   PsbK-like  
Traes_4DS_DF690B97B.1   7.32e-18   25-61   PsbK-like  
Traes_5AL_109BB199C.1   3.53e-17   25-61   PsbK-like  
Traes_5AL_109BB199C1.1   3.53e-17   25-61   PsbK-like  
Traes_5AL_D5415F9FC.1   0.0000000000017   25-59   PsbK-like  
Traes_5AS_DF690B97B.1   7.32e-18   25-61   PsbK-like  
Traes_5BL_DF690B97B.1   7.32e-18   25-61   PsbK-like  
Traes_5DL_561B66F07.1   0.0000105   25-43   PsbK-like  
Traes_5DL_DF690B97B.1   7.32e-18   25-61   PsbK-like  
Traes_6AL_DF690B97B.1   7.32e-18   25-61   PsbK-like  
Traes_6AS_A31FA5562.1   0.000000183   25-54   PsbK-like  
Traes_6AS_DF690B97B.1   7.32e-18   25-61   PsbK-like  
Traes_6BL_DF690B97B.1   7.32e-18   25-61   PsbK-like  
Traes_6BS_DF690B97B.1   7.32e-18   25-61   PsbK-like  
Traes_6DL_DF690B97B.1   7.32e-18   25-61   PsbK-like  
Traes_6DL_DF690B97B1.1   7.32e-18   25-61   PsbK-like  
Traes_6DS_F1A510F0D.1   2.48e-16   18-54   PsbK-like  
Traes_6DS_F1A510F0D1.1   2.48e-16   18-54   PsbK-like  
Traes_6DS_F1A510F0D2.1   2.48e-16   18-54   PsbK-like  
Traes_7AL_DF690B97B.1   7.32e-18   25-61   PsbK-like  
Traes_7AS_DF690B97B.1   7.32e-18   25-61   PsbK-like  
Traes_7BL_DF690B97B.1   7.32e-18   25-61   PsbK-like  
Traes_7BS_354668367.1   2.09e-17   25-61   PsbK-like  
Traes_7BS_3546683671.1   2.09e-17   25-61   PsbK-like  
Traes_7DL_DF690B97B.1   7.32e-18   25-61   PsbK-like  

Oryza glaberrima has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
ORGLA03G0396300.1   1.2e-17   25-61   PsbK-like  
ORGLA06G0263000.1   1.2e-17   25-61   PsbK-like  
ORGLA10G0156700.1   1.2e-17   25-61   PsbK-like  

Oryza sativa ssp. japonica 5.0 has 4 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
LOC_Os02g24642.1|13102.m12281|protein   1.2e-17   25-61   PsbK-like  
LOC_Os04g16866.1|13104.m11743|protein   1.2e-17   25-61   PsbK-like  
LOC_Os10g21198.1|13110.m07690|protein   5.23e-17   25-61   PsbK-like  
LOC_Os10g41696.1|13110.m07778|protein   1.2e-17   25-61   PsbK-like  

Oryza sativa v193 has 4 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
LOC_Os02g24642.1|PACid:21921099   1.2e-17   25-61   PsbK-like  
LOC_Os04g16866.1|PACid:21895839   1.2e-17   25-61   PsbK-like  
LOC_Os10g21198.1|PACid:21883920   5.23e-17   25-61   PsbK-like  
LOC_Os10g41696.1|PACid:21884274   1.2e-17   25-61   PsbK-like  

Panicum virgatum v202 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
Pavirv00056228m|PACid:23761647   0.0000000915   74-98   PsbK-like  

Setaria italica v164 has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
Si007947m|PACid:19703818   1.7e-16   73-108   PsbK-like  
Si018775m|PACid:19687454   2.35e-17   73-109   PsbK-like  
Si020855m|PACid:19697781   5.1e-18   25-61   PsbK-like  

Zea mays subsp. mays has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
GRMZM2G015355_P01   0.00000000157   28-55   PsbK-like  
GRMZM2G067883_P01   0.00000000000000353   84-120   PsbK-like  

Zea mays v181 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
GRMZM2G015355_T01|PACid:20869890   0.00000000157   28-55   PsbK-like  
GRMZM2G067883_T01|PACid:20882227   0.00000000000000353   84-120   PsbK-like  
 
Weak hits:
GRMZM2G484653_T01|PACid:20878213   0.0275   22-38   PsbK-like  

Asterochloris sp. Cgr/DA1pho v1.0 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
jgi|Astpho1|32331|e_gw1.00130.112.1   2.22e-17   13-49   PsbK-like  

Bathycoccus prasinos has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
BathyCg00290   6.54e-17   9-45   PsbK-like  

Cyanidioschyzon merolae strain 10D 22 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
CMV140CT   7.72e-17   7-43   PsbK-like  

Cyanidioschyzon merolae has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gnl|CMER|CMV140C   7.72e-17   7-43   PsbK-like  

Symbiodinium minutum clade B1 v1.2 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
symbB.v1.2.040276.t1|scaffold7118.1|size13241|3   0.0000000000000562   56-92   PsbK-like  

Picea sitchensis (Incomplete) has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
protPasi_116783908   5.36e-18   23-59   PsbK-like  

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Showing genomes 1 to 25 of 27

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Select to display   Genome       Domains   Proteins
No Yes ALL   5505 5505
No Yes Selaginella moellendorffii   1 1
No Yes Theobroma cacao B97-61/B2 v1 Cacao 1 1
No Yes Gossypium raimondii v221   1 1
No Yes Arabidopsis lyrata Lyrate rockcress 1 1
No Yes Arabidopsis thaliana 10 Thale cress 1 1
No Yes Medicago truncatula Barrel medic 2 2
No Yes Glycine max v109 Soybean 1 1
No Yes Populus trichocarpa v156 Black cottonwood 1 1
No Yes Vitis vinifera Wine grape 1 1
No Yes Aquilegia coerulea v195   1 1
No Yes Triticum urartu 22   6 6
No Yes Triticum aestivum 22 Bread wheat 56 56
No Yes Oryza glaberrima African rice 3 3
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 4 4
No Yes Oryza sativa v193 Rice 4 4
No Yes Panicum virgatum v202 Switchgrass 1 1
No Yes Setaria italica v164 Foxtail millet 3 3
No Yes Zea mays subsp. mays Maize 2 2
No Yes Zea mays v181 Maize 2 2
No Yes Asterochloris sp. Cgr/DA1pho v1.0   1 1
No Yes Bathycoccus prasinos   1 1
No Yes Cyanidioschyzon merolae strain 10D 22   1 1
No Yes Cyanidioschyzon merolae   1 1
No Yes Symbiodinium minutum clade B1 v1.2   1 1
No Yes Leptolyngbya sp. PCC 7376   1 1
No Yes Pseudanabaena sp. PCC 7367   1 1
No Yes Acaryochloris marina MBIC11017   1 1
No Yes Synechocystis sp. PCC 6803   1 1
No Yes Thermosynechococcus sp. NK55   1 1
No Yes Thermosynechococcus elongatus BP-1   1 1
No Yes Synechococcus sp. PCC 7502   1 1
No Yes Synechococcus sp. PCC 6312   1 1
No Yes Synechococcus sp. CC9311   1 1
No Yes Synechococcus elongatus PCC 7942   1 1
No Yes Prochlorococcus marinus str. MIT 9515   1 1
No Yes Microcoleus sp. PCC 7113   1 1
No Yes Trichodesmium erythraeum IMS101   1 1
No Yes Geitlerinema sp. PCC 7407   1 1
No Yes Cyanothece sp. PCC 8802   1 1
No Yes Gloeocapsa sp. PCC 7428   1 1
No Yes Halothece sp. PCC 7418   1 1
No Yes Microcystis aeruginosa NIES-843   1 1
No Yes Gloeobacter violaceus PCC 7421   1 1
No Yes Rivularia sp. PCC 7116   1 1
No Yes Calothrix sp. PCC 7507   1 1
No Yes Anabaena variabilis ATCC 29413   1 1
No Yes 'Nostoc azollae' 0708   1 1
No Yes Nostoc sp. PCC 7107   1 1
No Yes Nostoc punctiforme PCC 73102   1 1
No Yes Nostoc sp. PCC 7120   1 1
No Yes Nostoc sp. PCC 7524   1 1
No Yes Anabaena sp. 90   1 1
No Yes Chroococcidiopsis thermalis PCC 7203   1 1
No Yes Chamaesiphon minutus PCC 6605   1 1
No Yes Synechocystis sp. PCC 6803 substr. PCC-P   1 1
No Yes Synechocystis sp. PCC 6803 substr. PCC-N   1 1
No Yes Synechocystis sp. PCC 6803 substr. GT-I   1 1
No Yes Synechocystis sp. PCC 6803   1 1
No Yes Cyanobium gracile PCC 6307   1 1
No Yes Dactylococcopsis salina PCC 8305   1 1
No Yes Synechococcus sp. JA-2-3B'a(2-13)   1 1
No Yes Synechococcus sp. JA-3-3Ab   1 1
No Yes Synechococcus sp. CC9902   1 1
No Yes Synechococcus sp. RCC307   1 1
No Yes Synechococcus sp. CC9605   1 1
No Yes Synechococcus sp. WH 8102   1 1
No Yes Synechococcus sp. WH 7803   1 1
No Yes Synechococcus sp. PCC 7002   1 1
No Yes Synechococcus elongatus PCC 6301   1 1
No Yes Prochlorococcus marinus str. NATL1A   1 1
No Yes Prochlorococcus marinus str. MIT 9301   1 1
No Yes Prochlorococcus marinus str. AS9601   1 1
No Yes Prochlorococcus marinus subsp. marinus str. CCMP1375   1 1
No Yes Prochlorococcus marinus subsp. pastoris str. CCMP1986   1 1
No Yes Prochlorococcus marinus str. MIT 9215   1 1
No Yes Prochlorococcus marinus str. MIT 9211   1 1
No Yes Prochlorococcus marinus str. MIT 9313   1 1
No Yes Prochlorococcus marinus str. MIT 9312   1 1
No Yes Prochlorococcus marinus str. MIT 9303   1 1
No Yes Prochlorococcus marinus str. NATL2A   1 1
No Yes Crinalium epipsammum PCC 9333   1 1
No Yes Oscillatoria nigro-viridis PCC 7112   1 1
No Yes Oscillatoria acuminata PCC 6304   1 1
No Yes Arthrospira platensis NIES-39   1 1
No Yes Cyanothece sp. PCC 7822   1 1
No Yes Cyanothece sp. PCC 7425   1 1
No Yes Cyanothece sp. PCC 7424   1 1
No Yes Cyanothece sp. ATCC 51142   1 1
No Yes Cyanothece sp. PCC 8801   1 1
No Yes Cyanobacterium aponinum PCC 10605   1 1
No Yes Cyanobacterium stanieri PCC 7202   1 1
No Yes Gloeobacter kilaueensis Gloeobacter sp. JS   1 1
No Yes Pleurocapsa minor Pleurocapsa sp. PCC 7327   1 1
No Yes Stanieria cyanosphaera PCC 7437   1 1
No Yes Calothrix parietina Calothrix sp. PCC 6303   1 1
No Yes Cylindrospermum stagnale PCC 7417   1 1
No Yes Anabaena cylindrica PCC 7122   1 1
No Yes Picea sitchensis (Incomplete) Sitka spruce 1 1
No Yes Guillardia theta (nucleomorph)   1 1
No Yes Arabidopsis thaliana 10 Thale cress 1 1
No Yes 4_050719Q (meta-genome)   4 4
No Yes 5_050719P (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 01(G) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 02(H) (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   3 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   1 1
No Yes NCBI 2017_08 genome   410 410
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   49 49
No Yes Uniprot 2018_03 genome   4527 4527
No Yes Global Ocean Sampling Expedition (GOS)   12 12
No Yes PDB chains (SCOP 1.75) (PDB)   1 1
No Yes Protein Data Bank (all PDB sequenc)   85 85
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   103 103

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