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Cytochrome b559 subunits superfamily domain assignments
in
Brachypodium distachyon

Assignment details

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Brachypodium distachyon has 6 significant domains in 6 proteins.

     

Sequence ID   Evalue   Region   Family  
EG:BRADI1G05759.1   1.96e-31   3-61   Cytochrome b559 subunits  
EG:BRADI1G39215.1   1.48e-43   3-83   Cytochrome b559 subunits  
EG:BRADI3G03945.1   1.96e-42   3-83   Cytochrome b559 subunits  
EG:BRADI3G27345.1   3.14e-43   3-83   Cytochrome b559 subunits  
EG:BRADI5G06936.1   2.12e-36   3-82   Cytochrome b559 subunits  
EG:BRADI5G23866.1   1.48e-43   3-83   Cytochrome b559 subunits  

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Select to display   Genome       Domains   Proteins
No Yes ALL   11840 11840
No Yes Selaginella moellendorffii   2 2
No Yes Pinus taeda Loblolly pine 2 2
No Yes Picea abies Norway spruce 1 1
No Yes Eucalyptus grandis v201 Rose gum 2 1
No Yes Theobroma cacao B97-61/B2 v1 Cacao 2 1
No Yes Gossypium raimondii v221   7 7
No Yes Thellungiella halophila v173   1 1
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 1 1
No Yes Arabidopsis lyrata Lyrate rockcress 3 2
No Yes Arabidopsis thaliana 10 Thale cress 2 2
No Yes Carica papaya Papaya 2 2
No Yes Medicago truncatula Barrel medic 5 5
No Yes Glycine max v109 Soybean 2 2
No Yes Fragaria vesca Wild strawberry 2 2
No Yes Mimulus guttatus v140 Spotted monkey flower 1 1
No Yes Solanum lycopersicum v.2.3 Tomato 3 2
No Yes Solanum tuberosum Potato 1 1
No Yes Actinidia chinensis Hongyang   2 2
No Yes Aquilegia coerulea v195   3 3
No Yes Triticum urartu 22   7 7
No Yes Triticum aestivum 22 Bread wheat 84 84
No Yes Brachypodium distachyon Stiff brome 6 6
No Yes Oryza glaberrima African rice 9 9
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 3 3
No Yes Oryza sativa v193 Rice 3 3
No Yes Setaria italica v164 Foxtail millet 4 4
No Yes Zea mays subsp. mays Maize 5 5
No Yes Zea mays v181 Maize 7 7
No Yes Amborella trichopoda 22   1 1
No Yes Coccomyxa subellipsoidea sp. C-169 v2   1 1
No Yes Asterochloris sp. Cgr/DA1pho v1.0   1 1
No Yes Chlorella vulgaris   2 1
No Yes Volvox carteri f. nagariensis   1 1
No Yes Volvox carteri v199   1 1
No Yes Bathycoccus prasinos   2 2
No Yes Cyanidioschyzon merolae strain 10D 22   2 2
No Yes Cyanidioschyzon merolae   2 2
No Yes Thalassiosira pseudonana CCMP1335   1 1
No Yes Symbiodinium minutum clade B1 v1.2   5 5
No Yes Leptolyngbya sp. PCC 7376   2 2
No Yes Pseudanabaena sp. PCC 7367   2 2
No Yes Acaryochloris marina MBIC11017   3 3
No Yes Synechocystis sp. PCC 6803   2 2
No Yes Thermosynechococcus sp. NK55   2 2
No Yes Thermosynechococcus elongatus BP-1   2 2
No Yes Synechococcus sp. PCC 7502   2 2
No Yes Synechococcus sp. PCC 6312   2 2
No Yes Synechococcus sp. CC9311   2 2
No Yes Synechococcus elongatus PCC 7942   2 2
No Yes Prochlorococcus marinus str. MIT 9515   3 3
No Yes Microcoleus sp. PCC 7113   3 3
No Yes Trichodesmium erythraeum IMS101   2 2
No Yes Geitlerinema sp. PCC 7407   2 2
No Yes Cyanothece sp. PCC 8802   2 2
No Yes Gloeocapsa sp. PCC 7428   2 2
No Yes Halothece sp. PCC 7418   2 2
No Yes Microcystis aeruginosa NIES-843   2 2
No Yes Gloeobacter violaceus PCC 7421   2 2
No Yes Rivularia sp. PCC 7116   2 2
No Yes Calothrix sp. PCC 7507   2 2
No Yes Anabaena variabilis ATCC 29413   2 2
No Yes 'Nostoc azollae' 0708   2 2
No Yes Nostoc sp. PCC 7107   2 2
No Yes Nostoc punctiforme PCC 73102   2 2
No Yes Nostoc sp. PCC 7120   2 2
No Yes Nostoc sp. PCC 7524   2 2
No Yes Anabaena sp. 90   2 2
No Yes Chroococcidiopsis thermalis PCC 7203   2 2
No Yes Chamaesiphon minutus PCC 6605   2 2
No Yes Synechocystis sp. PCC 6803 substr. PCC-P   2 2
No Yes Synechocystis sp. PCC 6803 substr. PCC-N   2 2
No Yes Synechocystis sp. PCC 6803 substr. GT-I   2 2
No Yes Synechocystis sp. PCC 6803   2 2
No Yes Cyanobium gracile PCC 6307   2 2
No Yes Dactylococcopsis salina PCC 8305   2 2
No Yes Synechococcus sp. JA-2-3B'a(2-13)   2 2
No Yes Synechococcus sp. JA-3-3Ab   2 2
No Yes Synechococcus sp. CC9902   2 2
No Yes Synechococcus sp. RCC307   2 2
No Yes Synechococcus sp. CC9605   2 2
No Yes Synechococcus sp. WH 8102   2 2
No Yes Synechococcus sp. WH 7803   2 2
No Yes Synechococcus sp. PCC 7002   2 2
No Yes Synechococcus elongatus PCC 6301   2 2
No Yes Prochlorococcus marinus str. NATL1A   2 2
No Yes Prochlorococcus marinus str. MIT 9301   2 2
No Yes Prochlorococcus marinus str. AS9601   3 3
No Yes Prochlorococcus marinus subsp. marinus str. CCMP1375   3 3
No Yes Prochlorococcus marinus subsp. pastoris str. CCMP1986   2 2
No Yes Prochlorococcus marinus str. MIT 9215   3 3
No Yes Prochlorococcus marinus str. MIT 9211   3 3
No Yes Prochlorococcus marinus str. MIT 9313   2 2
No Yes Prochlorococcus marinus str. MIT 9312   3 3
No Yes Prochlorococcus marinus str. MIT 9303   2 2
No Yes Prochlorococcus marinus str. NATL2A   2 2
No Yes Crinalium epipsammum PCC 9333   2 2
No Yes Oscillatoria nigro-viridis PCC 7112   2 2
No Yes Oscillatoria acuminata PCC 6304   2 2
No Yes Arthrospira platensis NIES-39   2 2
No Yes Cyanothece sp. PCC 7822   2 2
No Yes Cyanothece sp. PCC 7425   2 2
No Yes Cyanothece sp. PCC 7424   2 2
No Yes Cyanothece sp. ATCC 51142   2 2
No Yes Cyanothece sp. PCC 8801   2 2
No Yes Cyanobacterium aponinum PCC 10605   2 2
No Yes Cyanobacterium stanieri PCC 7202   2 2
No Yes Gloeobacter kilaueensis Gloeobacter sp. JS   2 2
No Yes Pleurocapsa minor Pleurocapsa sp. PCC 7327   2 2
No Yes Stanieria cyanosphaera PCC 7437   2 2
No Yes Calothrix parietina Calothrix sp. PCC 6303   2 2
No Yes Cylindrospermum stagnale PCC 7417   2 2
No Yes Anabaena cylindrica PCC 7122   2 2
No Yes Lotus japonicus (Early assembly)   13 13
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   17 12
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 3 2
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 3 2
No Yes Guillardia theta (nucleomorph)   2 2
No Yes Arabidopsis thaliana 10 Thale cress 2 2
No Yes 4_050719Q (meta-genome)   4 4
No Yes 5_050719P (meta-genome)   2 2
No Yes Guerrero Negro salt ponds hypersaline mat 01(G) (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome)   2 2
No Yes NCBI 2017_08 genome   883 881
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   1 1
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   2 2
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   4 4
No Yes STRING v9.0.5 (STRING)   108 107
No Yes Uniprot 2018_03 genome   9704 9691
No Yes Global Ocean Sampling Expedition (GOS)   81 80
No Yes PDB chains (SCOP 1.75) (PDB)   4 4
No Yes Protein Data Bank (all PDB sequenc)   174 174
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   239 239

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