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PsbZ-like superfamily domain assignments
in
all genomes

Assignment details

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25 selected genomes have 104 significant domains in 104 proteins.

Showing genomes 1 to 25 of 123
  1 2 3 4 5   Next Last

Selaginella moellendorffii has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
jgi|Selmo1|9551|gw1.175.138.1   6.8e-17   2-60   PsbZ-like  

Pinus taeda has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
PITA_000015017-RA   0.00000000000915   1-42   PsbZ-like  

Eucalyptus grandis v201 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
Eucgr.B02051.1|PACid:23567152   1.28e-19   7-66   PsbZ-like  
Eucgr.F03556.1|PACid:23584685   0.000000157   23-61   PsbZ-like  
 
Weak hits:
Eucgr.B01403.1|PACid:23566532   0.00902   101-150   PsbZ-like  
Eucgr.B01406.1|PACid:23566535   0.0157   102-151   PsbZ-like  
Eucgr.G02548.1|PACid:23588189   0.00471   106-155   PsbZ-like  
Eucgr.G02549.1|PACid:23588190   0.00759   101-150   PsbZ-like  

Theobroma cacao B97-61/B2 v1 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
Tc04_g003900   8.89e-20   869-929   PsbZ-like  
 
Weak hits:
Tc09_g023220   0.0759   161-204   PsbZ-like  

Gossypium raimondii v221 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
Gorai.003G070800.1|PACid:26799961   2.88e-20   1-61   PsbZ-like  
 
Weak hits:
Gorai.004G018900.1|PACid:26774905   0.068   160-204   PsbZ-like  
Gorai.004G018900.4|PACid:26774906   0.0405   89-134   PsbZ-like  
Gorai.004G049900.1|PACid:26775994   0.00432   22-52   PsbZ-like  
Gorai.004G049900.2|PACid:26775993   0.00432   22-52   PsbZ-like  
Gorai.004G049900.3|PACid:26775992   0.00432   22-52   PsbZ-like  
Gorai.012G177000.1|PACid:26826992   0.0209   33-77   PsbZ-like  

Thellungiella halophila v173 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
Thhalv10011069m|PACid:20207361   4.84e-20   1-54   PsbZ-like  

Arabidopsis lyrata has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
jgi|Araly1|876370|Al_scaffold_0002_964   7.45e-23   15-75   PsbZ-like  
jgi|Araly1|876748|Al_scaffold_0002_1342   0.0000000000000471   15-65   PsbZ-like  
jgi|Araly1|894019|scaffold_201093.1   4.54e-38   6-62   SCOPe  
 
Weak hits:
jgi|Araly1|905885|scaffold_501589.1   0.0641   3-38   PsbZ-like  

Arabidopsis thaliana 10 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
ATCG00300.1   4.54e-38   6-62   SCOPe  

Medicago truncatula has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
Medtr8g056780.1   1.22e-23   1-61   PsbZ-like  
 
Weak hits:
Medtr1g055250.1   0.0615   253-301   PsbZ-like  
Medtr2g098150.1   0.0889   159-196   PsbZ-like  

Glycine max v109 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
Glyma01g11180.1|PACid:16243970   1.57e-23   1-61   PsbZ-like  
Glyma08g47870.1|PACid:16274211   7.98e-22   1-61   PsbZ-like  
 
Weak hits:
Glyma09g13500.1|PACid:16275594   0.0745   102-151   PsbZ-like  

Fragaria vesca has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gene00022   0.0000000000017   1-35   PsbZ-like  

Malus domestica v196 has 4 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
MDP0000038094|PACid:22651365   5.49e-22   9-69   PsbZ-like  
MDP0000038096|PACid:22642456   5.49e-22   9-69   PsbZ-like  
MDP0000038100|PACid:22634226   0.00000000719   1-43   PsbZ-like  
MDP0000322875|PACid:22629642   1.96e-21   30-90   PsbZ-like  
 
Weak hits:
MDP0000179571|PACid:22643236   0.0248   20-66   PsbZ-like  
MDP0000256005|PACid:22624489   0.0798   152-196   PsbZ-like  

Solanum lycopersicum v.2.3 has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
Solyc01g102770.1.1   2.62e-23   1-61   PsbZ-like  
Solyc10g017950.1.1   1.26e-21   1-61   PsbZ-like  
Solyc11g050770.1.1   3.01e-22   1-61   PsbZ-like  

Triticum urartu 22 has 6 significant domains in 6 proteins.

     

Sequence ID   Evalue   Region   Family  
TRIUR3_00074-P1   6.15e-23   9-69   PsbZ-like  
TRIUR3_01637-P1   1.7e-22   9-69   PsbZ-like  
TRIUR3_02008-P1   1.44e-22   9-69   PsbZ-like  
TRIUR3_03585-P1   4.84e-19   9-68   PsbZ-like  
TRIUR3_05778-P1   3.27e-18   7-65   PsbZ-like  
TRIUR3_13926-P1   0.000000000000222   6-62   PsbZ-like  

Triticum aestivum 22 has 49 significant domains in 49 proteins.

     

Sequence ID   Evalue   Region   Family  
Traes_1AL_9026A429E.1   1.44e-22   9-69   PsbZ-like  
Traes_1AS_9026A429E.1   1.44e-22   9-69   PsbZ-like  
Traes_1BL_310D83DA5.1   1.44e-22   9-69   PsbZ-like  
Traes_1BL_4B3305A84.1   8.37e-22   10-69   PsbZ-like  
Traes_1BL_A6EFB74B4.1   0.000000000445   9-40   PsbZ-like  
Traes_1BL_C269F7B04.1   8.24e-22   10-69   PsbZ-like  
Traes_1BL_C269F7B041.1   8.24e-22   10-69   PsbZ-like  
Traes_1BS_9026A429E.1   1.44e-22   9-69   PsbZ-like  
Traes_1DS_8A17E9B22.1   1.44e-22   9-69   PsbZ-like  
Traes_1DS_CAE9FC67E.1   2.75e-22   9-69   PsbZ-like  
Traes_2AL_6C270714E.1   1.44e-22   9-69   PsbZ-like  
Traes_2AL_6C270714E1.1   1.44e-22   9-69   PsbZ-like  
Traes_2AL_9026A429E.1   1.44e-22   9-69   PsbZ-like  
Traes_2BL_9026A429E.1   1.44e-22   9-69   PsbZ-like  
Traes_2BS_9026A429E.1   1.44e-22   9-69   PsbZ-like  
Traes_2DL_BAC674E70.1   1.44e-22   9-69   PsbZ-like  
Traes_2DS_F8F056420.1   0.0000000000131   9-42   PsbZ-like  
Traes_3AL_9026A429E.1   1.44e-22   9-69   PsbZ-like  
Traes_3AL_F6D8E5CB1.1   0.00000000353   1-31   PsbZ-like  
Traes_3AS_9026A429E.1   1.44e-22   9-69   PsbZ-like  
Traes_3B_9026A429E.1   1.44e-22   9-69   PsbZ-like  
Traes_3DL_9026A429E.1   1.44e-22   9-69   PsbZ-like  
Traes_3DS_9026A429E.1   1.44e-22   9-69   PsbZ-like  
Traes_4AL_9026A429E.1   1.44e-22   9-69   PsbZ-like  
Traes_4BL_9026A429E.1   1.44e-22   9-69   PsbZ-like  
Traes_4BS_9026A429E.1   1.44e-22   9-69   PsbZ-like  
Traes_4DL_532536E00.1   3.27e-20   9-69   PsbZ-like  
Traes_4DL_5B2217DCE.1   1.02e-20   9-69   PsbZ-like  
Traes_4DS_9026A429E.1   1.44e-22   9-69   PsbZ-like  
Traes_4DS_9026A429E1.1   1.44e-22   9-69   PsbZ-like  
Traes_5AL_4DF94D664.1   5.23e-18   1-50   PsbZ-like  
Traes_5AL_6B7870C0D.1   3.92e-22   9-69   PsbZ-like  
Traes_5AL_6B7870C0D1.1   3.92e-22   9-69   PsbZ-like  
Traes_5AS_9026A429E.1   1.44e-22   9-69   PsbZ-like  
Traes_5BL_9026A429E.1   1.44e-22   9-69   PsbZ-like  
Traes_5DL_BAC674E70.1   1.44e-22   9-69   PsbZ-like  
Traes_5DL_BAC674E701.1   1.44e-22   9-69   PsbZ-like  
Traes_6AL_9026A429E.1   1.44e-22   9-69   PsbZ-like  
Traes_6AS_9026A429E.1   1.44e-22   9-69   PsbZ-like  
Traes_6BL_9026A429E.1   1.44e-22   9-69   PsbZ-like  
Traes_6BS_9026A429E.1   1.44e-22   9-69   PsbZ-like  
Traes_6DL_9026A429E.1   1.44e-22   9-69   PsbZ-like  
Traes_6DS_9026A429E.1   1.44e-22   9-69   PsbZ-like  
Traes_7AL_9026A429E.1   1.44e-22   9-69   PsbZ-like  
Traes_7AS_9026A429E.1   1.44e-22   9-69   PsbZ-like  
Traes_7BL_CC086818C.1   0.00000000000000248   1-42   PsbZ-like  
Traes_7BS_9026A429E.1   1.44e-22   9-69   PsbZ-like  
Traes_7DL_9026A429E.1   1.44e-22   9-69   PsbZ-like  
Traes_7DS_9026A429E.1   1.44e-22   9-69   PsbZ-like  
 
Weak hits:
Traes_4AL_4FF5B8837.1   0.0131   1-37   PsbZ-like  
Traes_7BS_6A74B7E2B.1   0.0471   30-75   PsbZ-like  

Oryza glaberrima has 7 significant domains in 7 proteins.

     

Sequence ID   Evalue   Region   Family  
ORGLA03G0396500.1   2.09e-22   9-69   PsbZ-like  
ORGLA06G0207100.1   2.09e-22   9-69   PsbZ-like  
ORGLA06G0266300.1   2.09e-22   9-69   PsbZ-like  
ORGLA08G0203700.1   2.09e-22   9-69   PsbZ-like  
ORGLA10G0089800.1   6.41e-22   9-69   PsbZ-like  
ORGLA10G0156500.1   2.09e-22   9-69   PsbZ-like  
ORGLA11G0194600.1   2.09e-22   9-69   PsbZ-like  

Oryza sativa ssp. japonica 5.0 has 4 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
LOC_Os01g58038.1|13101.m14876|protein   1.27e-22   1-61   PsbZ-like  
LOC_Os02g24628.1|13102.m12286|protein   1.27e-22   1-61   PsbZ-like  
LOC_Os04g16876.1|13104.m11745|protein   1.27e-22   1-61   PsbZ-like  
LOC_Os10g21214.1|13110.m07694|protein   1.28e-22   1-61   PsbZ-like  

Oryza sativa v193 has 4 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
LOC_Os01g58038.1|PACid:21908362   1.27e-22   1-61   PsbZ-like  
LOC_Os02g24628.1|PACid:21920454   1.27e-22   1-61   PsbZ-like  
LOC_Os04g16876.1|PACid:21891915   1.27e-22   1-61   PsbZ-like  
LOC_Os10g21214.1|PACid:21883149   1.28e-22   1-61   PsbZ-like  

Setaria italica v164 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
Si039577m|PACid:19684516   1.31e-19   2-59   PsbZ-like  
 
Weak hits:
Si032084m|PACid:19713856   0.0641   275-327   PsbZ-like  

Zea mays subsp. mays has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
GRMZM2G374263_P01   4.18e-20   1-54   PsbZ-like  
GRMZM2G394732_P01   1.96e-22   1-61   PsbZ-like  
GRMZM2G414660_P01   1.96e-22   1-61   PsbZ-like  
 
Weak hits:
GRMZM2G148648_P01   0.0105   102-147   PsbZ-like  

Zea mays v181 has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
GRMZM2G374263_T01|PACid:20876238   4.18e-20   1-54   PsbZ-like  
GRMZM2G394732_T01|PACid:20882947   1.96e-22   1-61   PsbZ-like  
GRMZM2G414660_T01|PACid:20879435   1.96e-22   1-61   PsbZ-like  
 
Weak hits:
GRMZM2G148648_T01|PACid:20870283   0.0105   102-147   PsbZ-like  

Sorghum bicolor has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
jgi|Sorbi1|5029557|Sb01g029194   0.000000000000471   1-45   PsbZ-like  
jgi|Sorbi1|5035906|Sb03g020220   9.02e-23   1-61   PsbZ-like  
 
Weak hits:
jgi|Sorbi1|5044099|Sb07g026370   0.0248   109-154   PsbZ-like  

Bathycoccus prasinos has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
BathyCg00305   7.32e-21   1-61   PsbZ-like  
 
Weak hits:
Bathy08g00060   0.0262   4-37   PsbZ-like  

Cyanidioschyzon merolae strain 10D 22 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
CMV141CT   1.61e-21   6-62   SCOPe  

Cyanidioschyzon merolae has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gnl|CMER|CMV141C   1.61e-21   6-62   SCOPe  

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Select to display   Genome       Domains   Proteins
No Yes ALL   6675 6675
No Yes Selaginella moellendorffii   1 1
No Yes Pinus taeda Loblolly pine 1 1
No Yes Eucalyptus grandis v201 Rose gum 2 2
No Yes Theobroma cacao B97-61/B2 v1 Cacao 1 1
No Yes Gossypium raimondii v221   1 1
No Yes Thellungiella halophila v173   1 1
No Yes Arabidopsis lyrata Lyrate rockcress 3 3
No Yes Arabidopsis thaliana 10 Thale cress 1 1
No Yes Medicago truncatula Barrel medic 1 1
No Yes Glycine max v109 Soybean 2 2
No Yes Fragaria vesca Wild strawberry 1 1
No Yes Malus domestica v196 Apple 4 4
No Yes Solanum lycopersicum v.2.3 Tomato 3 3
No Yes Triticum urartu 22   6 6
No Yes Triticum aestivum 22 Bread wheat 49 49
No Yes Oryza glaberrima African rice 7 7
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 4 4
No Yes Oryza sativa v193 Rice 4 4
No Yes Setaria italica v164 Foxtail millet 1 1
No Yes Zea mays subsp. mays Maize 3 3
No Yes Zea mays v181 Maize 3 3
No Yes Sorghum bicolor Sorghum 2 2
No Yes Bathycoccus prasinos   1 1
No Yes Cyanidioschyzon merolae strain 10D 22   1 1
No Yes Cyanidioschyzon merolae   1 1
No Yes Thalassiosira pseudonana CCMP1335   1 1
No Yes Leptolyngbya sp. PCC 7376   1 1
No Yes Pseudanabaena sp. PCC 7367   1 1
No Yes Acaryochloris marina MBIC11017   1 1
No Yes Synechocystis sp. PCC 6803   1 1
No Yes Thermosynechococcus sp. NK55   1 1
No Yes Thermosynechococcus elongatus BP-1   1 1
No Yes Synechococcus sp. PCC 7502   1 1
No Yes Synechococcus sp. PCC 6312   1 1
No Yes Synechococcus sp. CC9311   1 1
No Yes Synechococcus elongatus PCC 7942   1 1
No Yes Prochlorococcus marinus str. MIT 9515   1 1
No Yes Microcoleus sp. PCC 7113   1 1
No Yes Trichodesmium erythraeum IMS101   1 1
No Yes Geitlerinema sp. PCC 7407   1 1
No Yes Cyanothece sp. PCC 8802   1 1
No Yes Gloeocapsa sp. PCC 7428   1 1
No Yes Halothece sp. PCC 7418   1 1
No Yes Microcystis aeruginosa NIES-843   1 1
No Yes Rivularia sp. PCC 7116   1 1
No Yes Calothrix sp. PCC 7507   1 1
No Yes Anabaena variabilis ATCC 29413   1 1
No Yes 'Nostoc azollae' 0708   1 1
No Yes Nostoc sp. PCC 7107   1 1
No Yes Nostoc punctiforme PCC 73102   1 1
No Yes Nostoc sp. PCC 7120   1 1
No Yes Nostoc sp. PCC 7524   1 1
No Yes Anabaena sp. 90   1 1
No Yes Hordeum vulgare 22 Domesticated barley 1 1
No Yes Chroococcidiopsis thermalis PCC 7203   1 1
No Yes Chamaesiphon minutus PCC 6605   1 1
No Yes Synechocystis sp. PCC 6803 substr. PCC-P   1 1
No Yes Synechocystis sp. PCC 6803 substr. PCC-N   1 1
No Yes Synechocystis sp. PCC 6803 substr. GT-I   1 1
No Yes Synechocystis sp. PCC 6803   1 1
No Yes Cyanobium gracile PCC 6307   1 1
No Yes Dactylococcopsis salina PCC 8305   1 1
No Yes Synechococcus sp. JA-2-3B'a(2-13)   1 1
No Yes Synechococcus sp. JA-3-3Ab   1 1
No Yes Synechococcus sp. CC9902   1 1
No Yes Synechococcus sp. RCC307   1 1
No Yes Synechococcus sp. CC9605   1 1
No Yes Synechococcus sp. WH 8102   1 1
No Yes Synechococcus sp. WH 7803   1 1
No Yes Synechococcus sp. PCC 7002   1 1
No Yes Synechococcus elongatus PCC 6301   1 1
No Yes Prochlorococcus marinus str. NATL1A   1 1
No Yes Prochlorococcus marinus str. MIT 9301   1 1
No Yes Prochlorococcus marinus str. AS9601   1 1
No Yes Prochlorococcus marinus subsp. marinus str. CCMP1375   1 1
No Yes Prochlorococcus marinus subsp. pastoris str. CCMP1986   1 1
No Yes Prochlorococcus marinus str. MIT 9215   1 1
No Yes Prochlorococcus marinus str. MIT 9211   1 1
No Yes Prochlorococcus marinus str. MIT 9313   1 1
No Yes Prochlorococcus marinus str. MIT 9312   1 1
No Yes Prochlorococcus marinus str. MIT 9303   1 1
No Yes Prochlorococcus marinus str. NATL2A   1 1
No Yes Crinalium epipsammum PCC 9333   1 1
No Yes Oscillatoria nigro-viridis PCC 7112   1 1
No Yes Oscillatoria acuminata PCC 6304   1 1
No Yes Arthrospira platensis NIES-39   1 1
No Yes Cyanothece sp. PCC 7822   1 1
No Yes Cyanothece sp. PCC 7425   1 1
No Yes Cyanothece sp. PCC 7424   1 1
No Yes Cyanothece sp. ATCC 51142   1 1
No Yes Cyanothece sp. PCC 8801   1 1
No Yes Cyanobacterium aponinum PCC 10605   1 1
No Yes Cyanobacterium stanieri PCC 7202   1 1
No Yes Pleurocapsa minor Pleurocapsa sp. PCC 7327   1 1
No Yes Stanieria cyanosphaera PCC 7437   1 1
No Yes Calothrix parietina Calothrix sp. PCC 6303   1 1
No Yes Cylindrospermum stagnale PCC 7417   1 1
No Yes Anabaena cylindrica PCC 7122   1 1
No Yes Lotus japonicus (Early assembly)   1 1
No Yes Malus x domestica (Duplicate) Apple 4 4
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 3 3
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 3 3
No Yes Guillardia theta (nucleomorph)   1 1
No Yes Arabidopsis thaliana 10 Thale cress 1 1
No Yes 4_050719Q (meta-genome)   8 8
No Yes 5_050719P (meta-genome)   1 1
No Yes Activated sludge plasmid pool Visp-2009 (Newbler) (meta-genome)   1 1
No Yes Dump top (Dump top) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   6 6
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome)   2 2
No Yes NCBI 2017_08 genome   408 408
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   2 2
No Yes STRING v9.0.5 (STRING)   51 51
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   1 1
No Yes Uniprot 2018_03 genome   5624 5624
No Yes Global Ocean Sampling Expedition (GOS)   63 63
No Yes PDB chains (SCOP 1.75) (PDB)   1 1
No Yes Protein Data Bank (all PDB sequenc)   81 81
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   126 126

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