SUPERFAMILY 1.75 HMM library and genome assignments server

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E6 C-terminal domain-like superfamily domain assignments
in
Aquilegia coerulea v195

Network of domain occurrence in all genomes



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Select to display   Genome       Domains   Proteins
No Yes ALL   6321 6321
No Yes Desulfotomaculum carboxydivorans CO-1-SRB   1 1
No Yes Caldicellulosiruptor lactoaceticus 6A   1 1
No Yes Caldicellulosiruptor kristjanssonii 177R1B   1 1
No Yes Candidatus Methylomirabilis oxyfera   1 1
No Yes Sorangium cellulosum 'So ce 56'   1 1
No Yes Mesorhizobium sp. BNC1   1 1
No Yes Nitrobacter winogradskyi Nb-255   1 1
No Yes Aciduliprofundum boonei T469   1 1
No Yes Rhodobacter sphaeroides 2.4.1   1 1
No Yes 2_050719S (meta-genome)   1 1
No Yes Dump bottom (Dump bottom) (meta-genome)   1 1
No Yes Dump top (Dump top) (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   1 1
No Yes NCBI 2017_08 genome   338 202
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   4 4
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome)   1 1
No Yes Uniprot 2018_03 genome   4528 2351
No Yes NCBI viral sequences (Viral)   228 117
No Yes PDB chains (SCOP 1.75) (PDB)   1 1
No Yes Protein Data Bank (all PDB sequenc)   16 11
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   19 19
No Yes TargetDB (Targets)   1 1
No Yes UniProt viral sequences (Viral)   1162 606

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