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E6 C-terminal domain-like superfamily domain assignments
in
all bacterial and archaeal genomes

Network of domain occurrence in all genomes


Assignment details

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9 selected genomes have 9 significant domains in 9 proteins.


Desulfotomaculum carboxydivorans CO-1-SRB has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|333923549|ref|YP_004497129.1|   0.0000144   9-51   E6 C-terminal domain-like  

Caldicellulosiruptor lactoaceticus 6A has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|344995502|ref|YP_004797845.1|   0.0000262   1-40   E6 C-terminal domain-like  

Caldicellulosiruptor kristjanssonii 177R1B has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|312794414|ref|YP_004027337.1|   0.0000183   1-40   E6 C-terminal domain-like  

Candidatus Methylomirabilis oxyfera has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|392374944|ref|YP_003206777.1|   0.0000405   89-128   E6 C-terminal domain-like  
 
Weak hits:
gi|392373162|ref|YP_003204995.1|   0.000445   66-104   E6 C-terminal domain-like  

Sorangium cellulosum 'So ce 56' has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|162455838|ref|YP_001618205.1|   0.0000615   22-68   E6 C-terminal domain-like  

Mesorhizobium sp. BNC1 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|110634242|ref|YP_674450.1|   0.0000863   64-103   E6 C-terminal domain-like  

Nitrobacter winogradskyi Nb-255 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|75675672|ref|YP_318093.1|   0.00000392   64-109   E6 C-terminal domain-like  

Aciduliprofundum boonei T469 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|289596018|ref|YP_003482714.1|   0.0000353   71-128   E6 C-terminal domain-like  

Rhodobacter sphaeroides 2.4.1 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|77462912|ref|YP_352416.1|   0.0000262   57-101   E6 C-terminal domain-like  

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View all assignments containing a E6 C-terminal domain-like domain in each group of genomes.

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Select to display   Genome       Domains   Proteins
No Yes ALL   6321 6321
No Yes Desulfotomaculum carboxydivorans CO-1-SRB   1 1
No Yes Caldicellulosiruptor lactoaceticus 6A   1 1
No Yes Caldicellulosiruptor kristjanssonii 177R1B   1 1
No Yes Candidatus Methylomirabilis oxyfera   1 1
No Yes Sorangium cellulosum 'So ce 56'   1 1
No Yes Mesorhizobium sp. BNC1   1 1
No Yes Nitrobacter winogradskyi Nb-255   1 1
No Yes Aciduliprofundum boonei T469   1 1
No Yes Rhodobacter sphaeroides 2.4.1   1 1
No Yes 2_050719S (meta-genome)   1 1
No Yes Dump bottom (Dump bottom) (meta-genome)   1 1
No Yes Dump top (Dump top) (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   1 1
No Yes NCBI 2017_08 genome   338 202
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   4 4
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome)   1 1
No Yes Uniprot 2018_03 genome   4528 2351
No Yes NCBI viral sequences (Viral)   228 117
No Yes PDB chains (SCOP 1.75) (PDB)   1 1
No Yes Protein Data Bank (all PDB sequenc)   16 11
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   19 19
No Yes TargetDB (Targets)   1 1
No Yes UniProt viral sequences (Viral)   1162 606

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