SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.


RILP dimerisation region superfamily domain assignments
in
all eukaryotic genomes

Assignment details

(show help)

25 selected genomes have 68 significant domains in 68 proteins.

Showing genomes 1 to 25 of 191
  1 2 3 4 5 6 7 8   Next Last

Homo sapiens 76_38 has 6 significant domains in 6 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSP00000280571   3.27e-18   134-205   RILP dimerisation region  
ENSP00000301336   2.09e-17   244-307   RILP dimerisation region  
ENSP00000345874   2.62e-17   143-173,206-239   RILP dimerisation region  
ENSP00000366070   5.1e-20   295-359   RILP dimerisation region  
ENSP00000459101   7.45e-18   97-160   RILP dimerisation region  
ENSP00000481849   2.09e-17   244-307   RILP dimerisation region  
 
Weak hits:
ENSP00000250894   0.00126   524-577   RILP dimerisation region  
ENSP00000257312   0.0275   238-283   RILP dimerisation region  
ENSP00000262013   0.00235   504-557   RILP dimerisation region  
ENSP00000347821   0.0123   775-810   RILP dimerisation region  
ENSP00000348290   0.00126   518-571   RILP dimerisation region  
ENSP00000349636   0.00235   490-543   RILP dimerisation region  
ENSP00000355018   0.0275   238-283   RILP dimerisation region  
ENSP00000355175   0.0275   238-283   RILP dimerisation region  
ENSP00000366025   0.0275   238-283   RILP dimerisation region  
ENSP00000376273   0.0105   6-37   RILP dimerisation region  
ENSP00000423165   0.00196   347-400   RILP dimerisation region  
ENSP00000426900   0.00405   490-519   RILP dimerisation region  
ENSP00000432590   0.0105   6-37   RILP dimerisation region  
ENSP00000432787   0.0105   6-37   RILP dimerisation region  
ENSP00000432806   0.00654   6-37   RILP dimerisation region  
ENSP00000435447   0.0353   6-36   RILP dimerisation region  
ENSP00000440941   0.0968   83-105   RILP dimerisation region  
ENSP00000462098   0.00034   32-62   RILP dimerisation region  
ENSP00000463549   0.000288   32-62   RILP dimerisation region  
ENSP00000463801   0.000353   40-69   RILP dimerisation region  
ENSP00000464602   0.000392   32-62   RILP dimerisation region  
ENSP00000464646   0.00068   40-69   RILP dimerisation region  
ENSP00000471454   0.0101   254-303   RILP dimerisation region  
ENSP00000481780   0.00126   525-578   RILP dimerisation region  
ENSP00000484908   0.00262   490-538   RILP dimerisation region  

Pan troglodytes 76_2.1.4 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSPTRP00000009520   8.89e-20   285-349   RILP dimerisation region  
ENSPTRP00000009523   3.66e-18   134-205   RILP dimerisation region  
 
Weak hits:
ENSPTRP00000040605   0.00235   504-557   RILP dimerisation region  
ENSPTRP00000053427   0.0275   237-282   RILP dimerisation region  
ENSPTRP00000053801   0.00126   524-577   RILP dimerisation region  

Gorilla gorilla 76_3.1 has 5 significant domains in 5 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSGGOP00000005398   1.57e-17   186-249   RILP dimerisation region  
ENSGGOP00000010542   7.59e-18   127-198   RILP dimerisation region  
ENSGGOP00000014567   5.1e-20   295-359   RILP dimerisation region  
ENSGGOP00000022411   8.24e-18   134-205   RILP dimerisation region  
ENSGGOP00000024309   8.24e-18   134-205   RILP dimerisation region  
 
Weak hits:
ENSGGOP00000006088   0.00126   524-577   RILP dimerisation region  
ENSGGOP00000011626   0.00863   550-585   RILP dimerisation region  
ENSGGOP00000014933   0.00196   385-438   RILP dimerisation region  
ENSGGOP00000016456   0.0183   240-286   RILP dimerisation region  
ENSGGOP00000018830   0.00876   553-588   RILP dimerisation region  
ENSGGOP00000020945   0.00126   525-578   RILP dimerisation region  
ENSGGOP00000021415   0.00196   363-416   RILP dimerisation region  
ENSGGOP00000027914   0.000745   43-72   RILP dimerisation region  
ENSGGOP00000028256   0.0129   251-292   RILP dimerisation region  

Pongo abelii 76_2 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSPPYP00000005796   5.49e-19   274-337   RILP dimerisation region  
ENSPPYP00000008762   2.09e-17   244-307   RILP dimerisation region  
 
Weak hits:
ENSPPYP00000006210   0.0235   184-229   RILP dimerisation region  
ENSPPYP00000007880   0.000915   213-266   RILP dimerisation region  
ENSPPYP00000009292   0.00235   490-543   RILP dimerisation region  
ENSPPYP00000024490   0.00209   351-404   RILP dimerisation region  

Nomascus leucogenys 76_1.0 has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSNLEP00000001038   2.09e-17   244-307   RILP dimerisation region  
ENSNLEP00000001920   4.32e-18   134-205   RILP dimerisation region  
ENSNLEP00000001944   2.35e-18   193-259   RILP dimerisation region  
 
Weak hits:
ENSNLEP00000002917   0.0114   254-304   RILP dimerisation region  
ENSNLEP00000009651   0.00235   503-556   RILP dimerisation region  
ENSNLEP00000016813   0.011   696-731   RILP dimerisation region  
ENSNLEP00000023541   0.000262   187-240   RILP dimerisation region  

Papio anubis 76 has 4 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSPANP00000007568   4.71e-18   142-213   RILP dimerisation region  
ENSPANP00000009050   6.28e-18   295-356   RILP dimerisation region  
ENSPANP00000009423   8.37e-20   295-359   RILP dimerisation region  
ENSPANP00000019478   1.96e-17   232-295   RILP dimerisation region  
 
Weak hits:
ENSPANP00000001995   0.0262   262-313   RILP dimerisation region  
ENSPANP00000002167   0.0288   237-282   RILP dimerisation region  
ENSPANP00000009630   0.0124   818-853   RILP dimerisation region  
ENSPANP00000013618   0.00123   532-585   RILP dimerisation region  
ENSPANP00000013622   0.00126   525-578   RILP dimerisation region  
ENSPANP00000018278   0.0288   238-283   RILP dimerisation region  
ENSPANP00000020297   0.00785   504-532   RILP dimerisation region  
ENSPANP00000020298   0.00235   490-543   RILP dimerisation region  
ENSPANP00000020937   0.00667   48-69   RILP dimerisation region  

Macaca mulatta 76_1 has 5 significant domains in 5 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSMMUP00000003183   1.96e-17   238-301   RILP dimerisation region  
ENSMMUP00000011033   5.75e-18   262-328   RILP dimerisation region  
ENSMMUP00000035449   5.23e-18   33-96   RILP dimerisation region  
ENSMMUP00000038434   7.72e-19   242-305   RILP dimerisation region  
ENSMMUP00000038436   4.58e-18   139-210   RILP dimerisation region  
 
Weak hits:
ENSMMUP00000004191   0.0353   6-36   RILP dimerisation region  
ENSMMUP00000007694   0.0275   237-282   RILP dimerisation region  
ENSMMUP00000007696   0.0275   237-282   RILP dimerisation region  
ENSMMUP00000012993   0.0942   60-101   RILP dimerisation region  
ENSMMUP00000017277   0.0119   775-810   RILP dimerisation region  
ENSMMUP00000022044   0.000589   36-65   RILP dimerisation region  
ENSMMUP00000023024   0.00127   524-577   RILP dimerisation region  
ENSMMUP00000029449   0.0732   181-211   RILP dimerisation region  
ENSMMUP00000029661   0.00209   389-442   RILP dimerisation region  
ENSMMUP00000029662   0.0034   389-418   RILP dimerisation region  
ENSMMUP00000034223   0.000811   17-46   RILP dimerisation region  
ENSMMUP00000035557   0.0458   80-116   RILP dimerisation region  

Callithrix jacchus 76_3.2.1 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSCJAP00000007981   0.0000000000275   136-165   RILP dimerisation region  
ENSCJAP00000013254   2.48e-20   192-256   RILP dimerisation region  
 
Weak hits:
ENSCJAP00000006889   0.0353   6-36   RILP dimerisation region  
ENSCJAP00000014824   0.0929   767-819   RILP dimerisation region  
ENSCJAP00000027006   0.000615   343-396   RILP dimerisation region  
ENSCJAP00000027014   0.000876   172-225   RILP dimerisation region  
ENSCJAP00000034353   0.00235   492-545   RILP dimerisation region  
ENSCJAP00000034362   0.00235   499-552   RILP dimerisation region  
ENSCJAP00000044382   0.00144   102-155   RILP dimerisation region  
ENSCJAP00000046068   0.00275   67-106   RILP dimerisation region  
ENSCJAP00000046127   0.00196   347-400   RILP dimerisation region  
ENSCJAP00000047301   0.00523   478-507   RILP dimerisation region  
ENSCJAP00000049299   0.0209   79-122   RILP dimerisation region  
  0.0981   340-368   RILP dimerisation region  

Otolemur garnettii 76_3 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSOGAP00000008233   2.35e-19   297-361   RILP dimerisation region  
ENSOGAP00000010119   0.00000000000000126   138-209   RILP dimerisation region  
 
Weak hits:
ENSOGAP00000003616   0.00235   504-557   RILP dimerisation region  
ENSOGAP00000006536   0.0288   254-305   RILP dimerisation region  
ENSOGAP00000011328   0.00126   525-578   RILP dimerisation region  
ENSOGAP00000011506   0.0667   259-296   RILP dimerisation region  

Microcebus murinus 76_1 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSMICP00000006032   0.000000000000418   129-200   RILP dimerisation region  
 
Weak hits:
ENSMICP00000001920   0.00112   418-471   RILP dimerisation region  
ENSMICP00000012560   0.0157   426-452   RILP dimerisation region  
ENSMICP00000014310   0.00602   710-763   RILP dimerisation region  

Rattus norvegicus 76_5.0 has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSRNOP00000001401   4.05e-20   298-362   RILP dimerisation region  
ENSRNOP00000001403   5.1e-18   123-191   RILP dimerisation region  
ENSRNOP00000005039   1.11e-17   220-283   RILP dimerisation region  
 
Weak hits:
ENSRNOP00000003777   0.00235   490-543   RILP dimerisation region  
ENSRNOP00000039682   0.00144   510-563   RILP dimerisation region  

Mus musculus 76_38 has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSMUSP00000031347   7.85e-18   123-191   RILP dimerisation region  
ENSMUSP00000037238   1.57e-18   223-286   RILP dimerisation region  
ENSMUSP00000050014   4.05e-20   298-362   RILP dimerisation region  
 
Weak hits:
ENSMUSP00000024979   0.00196   351-404   RILP dimerisation region  
ENSMUSP00000033811   0.0209   766-804   RILP dimerisation region  
ENSMUSP00000042271   0.00235   490-543   RILP dimerisation region  
ENSMUSP00000075115   0.00196   351-404   RILP dimerisation region  
ENSMUSP00000084663   0.0209   766-804   RILP dimerisation region  
ENSMUSP00000085683   0.00126   525-578   RILP dimerisation region  
ENSMUSP00000090452   0.00196   352-405   RILP dimerisation region  
ENSMUSP00000096377   0.0536   251-287   RILP dimerisation region  
ENSMUSP00000099457   0.00196   347-400   RILP dimerisation region  
ENSMUSP00000110883   0.00144   510-563   RILP dimerisation region  
ENSMUSP00000110884   0.00127   533-586   RILP dimerisation region  
ENSMUSP00000112712   0.00123   502-555   RILP dimerisation region  
ENSMUSP00000112955   0.00123   493-546   RILP dimerisation region  
ENSMUSP00000113698   0.00123   494-547   RILP dimerisation region  
ENSMUSP00000113753   0.00122   488-541   RILP dimerisation region  
ENSMUSP00000114084   0.00126   524-577   RILP dimerisation region  
ENSMUSP00000114802   0.00126   525-578   RILP dimerisation region  
ENSMUSP00000115864   0.0012   340-393   RILP dimerisation region  
ENSMUSP00000117502   0.00144   71-124   RILP dimerisation region  
ENSMUSP00000132730   0.0144   542-590   RILP dimerisation region  
ENSMUSP00000136924   0.00126   525-578   RILP dimerisation region  
ENSMUSP00000138057   0.000654   40-69   RILP dimerisation region  

Dipodomys ordii 76_1 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSDORP00000001743   0.000000000017   100-129   RILP dimerisation region  
 
Weak hits:
ENSDORP00000005290   0.0116   498-525   RILP dimerisation region  
ENSDORP00000009082   0.00112   400-453   RILP dimerisation region  

Ictidomys tridecemlineatus 76_2 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSSTOP00000002174   2.35e-16   130-201   RILP dimerisation region  
 
Weak hits:
ENSSTOP00000001004   0.0432   164-194   RILP dimerisation region  
ENSSTOP00000003367   0.00101   304-357   RILP dimerisation region  
ENSSTOP00000017329   0.0432   434-487   RILP dimerisation region  

Heterocephalus glaber v1.7-2 has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
HGL_H00000280571   3.27e-16   133-203   RILP dimerisation region  
HGL_H00000301336   0.00000000000000235   249-333   RILP dimerisation region  
HGL_H00000366070   2.75e-20   296-360   RILP dimerisation region  
 
Weak hits:
HGL_H00000250894   0.00144   519-572   RILP dimerisation region  
HGL_H00000257181-3   0.0654   92-125   RILP dimerisation region  
HGL_H00000310572   0.00126   53-82   RILP dimerisation region  
HGL_H00000365589   0.00248   525-578   RILP dimerisation region  
HGL_H00000376275   0.00929   33-67   RILP dimerisation region  

Cavia porcellus 76_3 has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSCPOP00000002320   4.71e-20   280-344   RILP dimerisation region  
ENSCPOP00000009313   3.14e-18   224-287   RILP dimerisation region  
ENSCPOP00000019911   0.000000000000011   132-202   RILP dimerisation region  
 
Weak hits:
ENSCPOP00000000053   0.0418   246-289   RILP dimerisation region  
ENSCPOP00000004816   0.00127   533-586   RILP dimerisation region  
ENSCPOP00000007649   0.00785   504-532   RILP dimerisation region  
ENSCPOP00000009259   0.0785   52-80   RILP dimerisation region  

Oryctolagus cuniculus 76_2 has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSOCUP00000000067   2.88e-18   236-299   RILP dimerisation region  
ENSOCUP00000004215   6.54e-20   298-362   RILP dimerisation region  
ENSOCUP00000020021   6.54e-20   299-363   RILP dimerisation region  
 
Weak hits:
ENSOCUP00000000711   0.00222   433-486   RILP dimerisation region  
ENSOCUP00000014170   0.0196   154-183   RILP dimerisation region  

Ochotona princeps 76 has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSOPRP00000002833   9.29e-16   231-294   RILP dimerisation region  
ENSOPRP00000010141   7.06e-17   139-205   RILP dimerisation region  
ENSOPRP00000010164   3.01e-19   141-204   RILP dimerisation region  
 
Weak hits:
ENSOPRP00000001222   0.0536   123-156   RILP dimerisation region  
ENSOPRP00000001332   0.00602   524-553   RILP dimerisation region  
ENSOPRP00000004035   0.0262   773-827   RILP dimerisation region  
ENSOPRP00000012413   0.00222   463-516   RILP dimerisation region  
ENSOPRP00000013715   0.000811   39-68   RILP dimerisation region  

Tupaia belangeri 76 has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSTBEP00000006045   2.22e-18   124-187   RILP dimerisation region  
ENSTBEP00000009553   0.00000000000000109   274-336   RILP dimerisation region  
ENSTBEP00000011659   0.00000000000209   134-167   RILP dimerisation region  
 
Weak hits:
ENSTBEP00000010160   0.0484   34-64   RILP dimerisation region  
ENSTBEP00000011011   0.00458   442-471   RILP dimerisation region  

Sus scrofa 76_10.2 has 4 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSSSCP00000010436   4.97e-20   295-359   RILP dimerisation region  
ENSSSCP00000010441   3.53e-18   127-198   RILP dimerisation region  
ENSSSCP00000018876   1.57e-17   245-307   RILP dimerisation region  
ENSSSCP00000021373   1.31e-17   229-291   RILP dimerisation region  
 
Weak hits:
ENSSSCP00000002122   0.0115   78-115   RILP dimerisation region  
ENSSSCP00000003356   0.000706   253-306   RILP dimerisation region  
ENSSSCP00000004563   0.0484   35-64   RILP dimerisation region  
ENSSSCP00000008562   0.00126   525-578   RILP dimerisation region  

Bos taurus 76_3.1 has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSBTAP00000010264   1.26e-18   129-200   RILP dimerisation region  
ENSBTAP00000029666   2.35e-20   295-359   RILP dimerisation region  
ENSBTAP00000048816   5.89e-18   244-307   RILP dimerisation region  
 
Weak hits:
ENSBTAP00000004332   0.0458   35-64   RILP dimerisation region  

Ovis aries 76_3.1 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSOARP00000003801   2.35e-20   295-359   RILP dimerisation region  
ENSOARP00000003887   3.27e-18   129-199   RILP dimerisation region  
 
Weak hits:
ENSOARP00000003353   0.00235   490-543   RILP dimerisation region  
ENSOARP00000011203   0.00654   259-308   RILP dimerisation region  
ENSOARP00000014730   0.000824   46-75   RILP dimerisation region  
ENSOARP00000017518   0.000994   413-466   RILP dimerisation region  

Vicugna pacos 76_1 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSVPAP00000006535   2.48e-19   192-255   RILP dimerisation region  
 
Weak hits:
ENSVPAP00000003787   0.00222   432-485   RILP dimerisation region  
ENSVPAP00000009242   0.0824   256-292   RILP dimerisation region  

Tursiops truncatus 76_1 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSTTRP00000006494   3.01e-17   101-164   RILP dimerisation region  
 
Weak hits:
ENSTTRP00000001518   0.0549   303-338   RILP dimerisation region  
ENSTTRP00000002567   0.00235   504-557   RILP dimerisation region  

Mustela putorius furo 76_1.0 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSMPUP00000001608   1.16e-18   295-358   RILP dimerisation region  
ENSMPUP00000001611   3.66e-18   131-202   RILP dimerisation region  
 
Weak hits:
ENSMPUP00000005389   0.0085   253-303   RILP dimerisation region  
ENSMPUP00000006665   0.0641   164-195   RILP dimerisation region  
ENSMPUP00000014397   0.017   35-64   RILP dimerisation region  
ENSMPUP00000015444   0.00235   490-543   RILP dimerisation region  
ENSMPUP00000015504   0.00112   411-464   RILP dimerisation region  
ENSMPUP00000019983   0.0118   47-81   RILP dimerisation region  

  1 2 3 4 5 6 7 8   Next Last
Showing genomes 1 to 25 of 191

Jump to [ Top of page · Assignment details · Add assignments from individual genomes ]


Add assignments from groups of genomes

View all assignments containing a RILP dimerisation region domain in each group of genomes.

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes ]


Add assignments from individual genomes

Select additional genomes you would like to see domain assignments for, then click 'Submit'.

Select to display   Genome       Domains   Proteins
No Yes ALL   3278 3278
No Yes Homo sapiens 76_38 Human 6 6
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 2 2
No Yes Gorilla gorilla 76_3.1 Western gorilla 5 5
No Yes Pongo abelii 76_2 Sumatran orangutan 2 2
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 3 3
No Yes Papio anubis 76 Olive baboon 4 4
No Yes Macaca mulatta 76_1 Rhesus monkey 5 5
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 2 2
No Yes Otolemur garnettii 76_3 Small-eared galago 2 2
No Yes Microcebus murinus 76_1 Gray mouse lemur 1 1
No Yes Rattus norvegicus 76_5.0 Norway rat 3 3
No Yes Mus musculus 76_38 House mouse 3 3
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 1 1
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 1 1
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 3 3
No Yes Cavia porcellus 76_3 Domestic guinea pig 3 3
No Yes Oryctolagus cuniculus 76_2 Rabbit 3 3
No Yes Ochotona princeps 76 American pika 3 3
No Yes Tupaia belangeri 76 Northern tree shrew 3 3
No Yes Sus scrofa 76_10.2 Pig 4 4
No Yes Bos taurus 76_3.1 Cattle 3 3
No Yes Ovis aries 76_3.1 Sheep 2 2
No Yes Vicugna pacos 76_1 Alpaca 1 1
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 1 1
No Yes Mustela putorius furo 76_1.0 Domestic ferret 2 2
No Yes Ailuropoda melanoleuca 76_1 Giant panda 3 3
No Yes Canis familiaris 76_3.1 Dog 3 3
No Yes Felis catus 76_6.2 Domestic cat 3 3
No Yes Equus caballus 76_2 Horse 3 3
No Yes Myotis lucifugus 76_2.0 Little brown bat 4 4
No Yes Pteropus vampyrus 76_1 Large flying fox 3 3
No Yes Sorex araneus 76_1 European shrew 2 2
No Yes Erinaceus europaeus 76 Western European hedgehog 2 2
No Yes Procavia capensis 76_1 Cape rock hyrax 1 1
No Yes Loxodonta africana 76_3 African savanna elephant 4 4
No Yes Echinops telfairi 76 Small Madagascar hedgehog 3 3
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 4 4
No Yes Macropus eugenii 76_1.0 Tammar wallaby 3 3
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 2 2
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 4 4
No Yes Ornithorhynchus anatinus 76_5 Platypus 4 4
No Yes Saccoglossus kowalevskii v3.0   1 1
No Yes Petromyzon marinus 76_7.0 Sea lamprey 1 1
No Yes Meleagris gallopavo 76_2 Turkey 3 3
No Yes Gallus gallus 76_4 Chicken 3 3
No Yes Anas platyrhynchos 76_1.0 Mallard 3 3
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 3 3
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 3 3
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 4 4
No Yes Anolis carolinensis 76_2.0 Green anole 4 4
No Yes Xenopus laevis African clawed frog 8 8
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 3 3
No Yes Latimeria chalumnae 76_1 Coelacanth 5 5
No Yes Lepisosteus oculatus 76 Spotted gar 2 2
No Yes Gadus morhua 76_1 Atlantic cod 4 4
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 4 4
No Yes Takifugu rubripes 76_4 Torafugu 9 9
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 4 4
No Yes Oryzias latipes 76_1 Japanese medaka 5 5
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 4 4
No Yes Poecilia formosa 76 Amazon molly 6 6
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 3 3
No Yes Astyanax mexicanus 76 Mexican tetra 3 3
No Yes Danio rerio 76_9 Zebrafish 2 2
No Yes Oikopleura dioica   1 1
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 1 1
No Yes Ciona intestinalis 76 Vase tunicate 1 1
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 1 1
No Yes Adineta vaga   3 3
No Yes Octopus bimaculoides 280   1 1
No Yes Crassostrea gigas 22 Pacific oyster 1 1
No Yes Lottia gigantea Owl limpet 1 1
No Yes Capitella sp. I   1 1
No Yes Danaus plexippus OGS1.0 Monarch butterfly 1 1
No Yes Nasonia vitripennis Jewel wasp 1 1
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 2 2
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 1 1
No Yes Linepithema humile v1.1 Argentine ant 1 1
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 1 1
No Yes Solenopsis invicta v.2.2.3 Red fire ant 1 1
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 2 2
No Yes Atta cephalotes v1.1   1 1
No Yes Camponotus floridanus v3.3 Florida carpenter ant 1 1
No Yes Lucilia cuprina Australian sheep blowfly 1 1
No Yes Drosophila grimshawi 1.3   1 1
No Yes Drosophila willistoni 1.3   1 1
No Yes Drosophila pseudoobscura 2.13   1 1
No Yes Drosophila persimilis 1.3   1 1
No Yes Drosophila suzukii   1 1
No Yes Drosophila yakuba 1.3   1 1
No Yes Drosophila sechellia 1.3   1 1
No Yes Drosophila melanogaster 76_5 Fruit fly 2 2
No Yes Drosophila erecta 1.3   1 1
No Yes Drosophila ananassae 1.3   1 1
No Yes Drosophila virilis 1.2   1 1
No Yes Drosophila mojavensis 1.3   1 1
No Yes Megaselia scalaris 22   1 1
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 1 1
No Yes Anopheles darlingi 22 American malaria mosquito 2 2
No Yes Anopheles gambiae 49_3j African malaria mosquito 2 2
No Yes Tribolium castaneum 3.0 Red flour beetle 1 1
No Yes Pediculus humanus corporis (Early assembly) Human body louse 1 1
No Yes Acyrthosiphon pisum Pea aphid 1 1
No Yes Rhodnius prolixus 22   1 1
No Yes Daphnia pulex Common water flea 1 1
No Yes Strigamia maritima 22   1 1
No Yes Tetranychus urticae Two-spotted spider mite 1 1
No Yes Ixodes scapularis (Preliminary) Black-legged tick 1 1
No Yes Pristionchus pacificus   1 1
No Yes Meloidogyne hapla   1 1
No Yes Onchocerca volvulus 22   1 1
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 1 1
No Yes Caenorhabditis japonica   1 1
No Yes Caenorhabditis brenneri   1 1
No Yes Caenorhabditis remanei   1 1
No Yes Caenorhabditis elegans 76_235 Roundworm 4 4
No Yes Caenorhabditis briggsae 2   1 1
No Yes Trichinella spiralis 22   1 1
No Yes Schistosoma mansoni   2 2
No Yes Nematostella vectensis 1.0 Starlet sea anemone 1 1
No Yes Hydra vulgaris   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 9 9
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 1 1
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 2 2
No Yes Ascaris suum Victoria/Ghent Pig roundworm 1 1
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 2 2
No Yes Ruminococcus champanellensis 18P13   1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 5 5
No Yes Homo sapiens (NCBI version) Human 3 3
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 3 3
No Yes Loa loa v3.3 (Request) Eye worm 1 1
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 1 1
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 1 1
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   1 1
No Yes Homo sapiens 69_37 Human 3 3
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 2 2
No Yes Gorilla gorilla 69_3.1 Western gorilla 4 4
No Yes Pongo abelii 69_2 Sumatran orangutan 2 2
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 3 3
No Yes Macaca mulatta 69_1 Rhesus monkey 3 3
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 2 2
No Yes Otolemur garnettii 69_3 Small-eared galago 2 2
No Yes Microcebus murinus 69_1 Gray mouse lemur 1 1
No Yes Rattus norvegicus 69_3.4 Norway rat 2 2
No Yes Mus musculus 69_38 House mouse 3 3
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 1 1
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 1 1
No Yes Cavia porcellus 69_3 Domestic guinea pig 3 3
No Yes Oryctolagus cuniculus 69_2 Rabbit 2 2
No Yes Ochotona princeps 69 American pika 3 3
No Yes Tupaia belangeri 69 Northern tree shrew 3 3
No Yes Sus scrofa 69_10.2 Pig 3 3
No Yes Bos taurus 69_3.1 Cattle 3 3
No Yes Vicugna pacos 69_1 Alpaca 1 1
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 1 1
No Yes Mustela putorius furo 69_1.0 Domestic ferret 2 2
No Yes Ailuropoda melanoleuca 69_1 Giant panda 3 3
No Yes Canis familiaris 69_3.1 Dog 3 3
No Yes Felis catus 69 Domestic cat 3 3
No Yes Equus caballus 69_2 Horse 3 3
No Yes Myotis lucifugus 69_2.0 Little brown bat 4 4
No Yes Pteropus vampyrus 69_1 Large flying fox 3 3
No Yes Sorex araneus 69_1 European shrew 2 2
No Yes Erinaceus europaeus 69 Western European hedgehog 2 2
No Yes Procavia capensis 69_1 Cape rock hyrax 1 1
No Yes Loxodonta africana 69_3 African savanna elephant 4 4
No Yes Echinops telfairi 69 Small Madagascar hedgehog 3 3
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 1 1
No Yes Macropus eugenii 69_1.0 Tammar wallaby 3 3
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 2 2
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 4 4
No Yes Ornithorhynchus anatinus 69_5 Platypus 3 3
No Yes Petromyzon marinus 69_7.0 Sea lamprey 1 1
No Yes Meleagris gallopavo 69_2 Turkey 3 3
No Yes Gallus gallus 69_2 Chicken 3 3
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 3 3
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 3 3
No Yes Anolis carolinensis 69_2.0 Green anole 3 3
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 3 3
No Yes Latimeria chalumnae 69_1 Coelacanth 3 3
No Yes Gadus morhua 69_1 Atlantic cod 4 4
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 4 4
No Yes Takifugu rubripes 69_4 Torafugu 3 3
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 4 4
No Yes Oryzias latipes 69_1 Japanese medaka 4 4
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 4 4
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 3 3
No Yes Danio rerio 69_9 Zebrafish 2 2
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 1 1
No Yes Ciona intestinalis 69 Vase tunicate 1 1
No Yes Drosophila melanogaster 69_5 Fruit fly 1 1
No Yes Caenorhabditis elegans 69_215 Roundworm 1 1
No Yes NCBI 2017_08 genome   1611 1611
No Yes STRING v9.0.5 (STRING)   92 92
No Yes Uniprot 2018_03 genome   909 906
No Yes PDB chains (SCOP 1.75) (PDB)   1 1
No Yes Protein Data Bank (all PDB sequenc)   1 1
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   3 3
No Yes TargetDB (Targets)   4 4

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]