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Homeodomain-like superfamily domain assignments
in
Eubacterium eligens ATCC 27750

Assignment details

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Eubacterium eligens ATCC 27750 has 32 significant domains in 21 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|238915997|ref|YP_002929514.1|   0.0000000000000108   10-72   Tetracyclin repressor-like, N-terminal domain  
gi|238916124|ref|YP_002929641.1|   0.0000000000000175   225-274   AraC type transcriptional activator  
  0.0000000152   171-223   AraC type transcriptional activator  
gi|238916302|ref|YP_002929819.1|   0.0000000000753   223-272   AraC type transcriptional activator  
  0.0000000112   170-221   AraC type transcriptional activator  
gi|238916677|ref|YP_002930194.1|   0.0000408   229-256   AraC type transcriptional activator  
gi|238916857|ref|YP_002930374.1|   1.11e-18   8-85   RpiR-like  
gi|238916907|ref|YP_002930424.1|   0.0000000000000108   3-65   Tetracyclin repressor-like, N-terminal domain  
gi|238916910|ref|YP_002930427.1|   0.00000000122   244-292   AraC type transcriptional activator  
  0.000242   195-241   AraC type transcriptional activator  
gi|238917165|ref|YP_002930682.1|   0.000000000000816   192-242   AraC type transcriptional activator  
  0.00000116   142-190   AraC type transcriptional activator  
gi|238917632|ref|YP_002931149.1|   0.00000000000103   461-510   AraC type transcriptional activator  
  0.000000376   408-459   AraC type transcriptional activator  
gi|238917634|ref|YP_002931151.1|   0.00000000000582   243-291   AraC type transcriptional activator  
  0.000000000112   191-241   AraC type transcriptional activator  
gi|238917651|ref|YP_002931168.1|   0.000000000104   9-73   Tetracyclin repressor-like, N-terminal domain  
gi|238917734|ref|YP_002931251.1|   0.0000185   291-327   FIS-like  
gi|238917763|ref|YP_002931280.1|   0.000000000000309   211-260   AraC type transcriptional activator  
  0.00000511   158-208   AraC type transcriptional activator  
gi|238917768|ref|YP_002931285.1|   0.000000000022   222-271   AraC type transcriptional activator  
  0.0000000264   172-219   AraC type transcriptional activator  
gi|238921777|ref|YP_002935291.1|   0.00000000000145   3-59   Tetracyclin repressor-like, N-terminal domain  
gi|238921868|ref|YP_002935382.1|   0.0000000000896   248-299   AraC type transcriptional activator  
  0.0000000493   196-246   AraC type transcriptional activator  
gi|238921928|ref|YP_002935442.1|   0.000000000000022   239-288   AraC type transcriptional activator  
  0.000000986   191-236   AraC type transcriptional activator  
gi|238921995|ref|YP_002935509.1|   0.000000000000112   234-286   AraC type transcriptional activator  
  0.000000762   187-231   AraC type transcriptional activator  
gi|238922049|ref|YP_002935563.1|   0.00000000000000825   3-66   Tetracyclin repressor-like, N-terminal domain  
gi|238922097|ref|YP_002935611.1|   0.000000000000439   18-84   Tetracyclin repressor-like, N-terminal domain  
gi|238922356|ref|YP_002935870.1|   0.000000000000582   353-400   AraC type transcriptional activator  
  0.0000627   300-349   AraC type transcriptional activator  
 
Weak hits:
gi|238916139|ref|YP_002929656.1|   0.0609   6-41   Recombinase DNA-binding domain  
gi|238916442|ref|YP_002929959.1|   0.00466   25-62   RpiR-like  
gi|238916781|ref|YP_002930298.1|   0.0788   204-240   Recombinase DNA-binding domain  
gi|238917191|ref|YP_002930708.1|   0.000851   309-348   Cgl2762-like  
gi|238917209|ref|YP_002930726.1|   0.0956   17-54   Paired domain  
gi|238917465|ref|YP_002930982.1|   0.00019   56-81   Middle operon regulator, Mor  

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Select to display   Genome       Domains   Proteins
No Yes ALL   7933149 7933149
No Yes Homo sapiens 76_38 Human 1092 871
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 339 282
No Yes Gorilla gorilla 76_3.1 Western gorilla 496 413
No Yes Pongo abelii 76_2 Sumatran orangutan 333 278
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 330 273
No Yes Papio anubis 76 Olive baboon 350 288
No Yes Macaca mulatta 76_1 Rhesus monkey 461 381
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 654 542
No Yes Otolemur garnettii 76_3 Small-eared galago 344 285
No Yes Microcebus murinus 76_1 Gray mouse lemur 253 220
No Yes Rattus norvegicus 76_5.0 Norway rat 415 345
No Yes Mus musculus 76_38 House mouse 851 707
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 217 188
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 325 275
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 313 262
No Yes Cavia porcellus 76_3 Domestic guinea pig 325 278
No Yes Oryctolagus cuniculus 76_2 Rabbit 333 281
No Yes Ochotona princeps 76 American pika 231 200
No Yes Tupaia belangeri 76 Northern tree shrew 183 160
No Yes Sus scrofa 76_10.2 Pig 325 283
No Yes Bos taurus 76_3.1 Cattle 344 288
No Yes Ovis aries 76_3.1 Sheep 353 296
No Yes Vicugna pacos 76_1 Alpaca 111 93
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 280 233
No Yes Mustela putorius furo 76_1.0 Domestic ferret 315 265
No Yes Ailuropoda melanoleuca 76_1 Giant panda 364 306
No Yes Canis familiaris 76_3.1 Dog 415 351
No Yes Felis catus 76_6.2 Domestic cat 316 263
No Yes Equus caballus 76_2 Horse 327 270
No Yes Myotis lucifugus 76_2.0 Little brown bat 301 255
No Yes Pteropus vampyrus 76_1 Large flying fox 267 229
No Yes Sorex araneus 76_1 European shrew 158 123
No Yes Erinaceus europaeus 76 Western European hedgehog 188 154
No Yes Procavia capensis 76_1 Cape rock hyrax 259 216
No Yes Loxodonta africana 76_3 African savanna elephant 451 380
No Yes Echinops telfairi 76 Small Madagascar hedgehog 275 209
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 373 305
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 165 138
No Yes Macropus eugenii 76_1.0 Tammar wallaby 233 208
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 335 287
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 336 282
No Yes Ornithorhynchus anatinus 76_5 Platypus 263 224
No Yes Saccoglossus kowalevskii v3.0   439 371
No Yes Petromyzon marinus 76_7.0 Sea lamprey 160 124
No Yes Meleagris gallopavo 76_2 Turkey 230 191
No Yes Gallus gallus 76_4 Chicken 299 254
No Yes Anas platyrhynchos 76_1.0 Mallard 255 215
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 265 225
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 271 229
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 475 385
No Yes Anolis carolinensis 76_2.0 Green anole 326 274
No Yes Xenopus laevis African clawed frog 937 851
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 399 341
No Yes Latimeria chalumnae 76_1 Coelacanth 509 416
No Yes Lepisosteus oculatus 76 Spotted gar 405 344
No Yes Gadus morhua 76_1 Atlantic cod 420 357
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 444 387
No Yes Takifugu rubripes 76_4 Torafugu 998 806
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 431 380
No Yes Oryzias latipes 76_1 Japanese medaka 442 395
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 366 315
No Yes Poecilia formosa 76 Amazon molly 420 355
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 507 438
No Yes Astyanax mexicanus 76 Mexican tetra 447 385
No Yes Danio rerio 76_9 Zebrafish 669 576
No Yes Oikopleura dioica   134 116
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 154 132
No Yes Ciona intestinalis 76 Vase tunicate 132 115
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 216 189
No Yes Adineta vaga   446 388
No Yes Octopus bimaculoides 280   222 187
No Yes Crassostrea gigas 22 Pacific oyster 181 156
No Yes Lottia gigantea Owl limpet 207 187
No Yes Helobdella robusta   322 303
No Yes Capitella sp. I   240 226
No Yes Danaus plexippus OGS1.0 Monarch butterfly 182 160
No Yes Heliconius melpomene Postman butterfly 153 131
No Yes Bombyx mori Domestic silkworm 173 156
No Yes Nasonia vitripennis Jewel wasp 125 107
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 363 316
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 161 137
No Yes Linepithema humile v1.1 Argentine ant 180 156
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 163 141
No Yes Solenopsis invicta v.2.2.3 Red fire ant 155 135
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 195 169
No Yes Atta cephalotes v1.1   175 153
No Yes Camponotus floridanus v3.3 Florida carpenter ant 183 157
No Yes Lucilia cuprina Australian sheep blowfly 152 133
No Yes Drosophila grimshawi 1.3   165 141
No Yes Drosophila willistoni 1.3   180 154
No Yes Drosophila pseudoobscura 2.13   162 139
No Yes Drosophila persimilis 1.3   151 132
No Yes Drosophila suzukii   172 130
No Yes Drosophila yakuba 1.3   167 142
No Yes Drosophila simulans 1.3   141 123
No Yes Drosophila sechellia 1.3   162 139
No Yes Drosophila melanogaster 76_5 Fruit fly 440 358
No Yes Drosophila erecta 1.3   162 138
No Yes Drosophila ananassae 1.3   164 139
No Yes Drosophila virilis 1.2   166 142
No Yes Drosophila mojavensis 1.3   163 141
No Yes Megaselia scalaris 22   75 67
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 145 129
No Yes Culex pipiens quinquefasciatus Southern house mosquito 183 160
No Yes Anopheles darlingi 22 American malaria mosquito 94 81
No Yes Anopheles gambiae 49_3j African malaria mosquito 156 131
No Yes Tribolium castaneum 3.0 Red flour beetle 194 168
No Yes Pediculus humanus corporis (Early assembly) Human body louse 160 133
No Yes Acyrthosiphon pisum Pea aphid 133 108
No Yes Rhodnius prolixus 22   174 156
No Yes Daphnia pulex Common water flea 202 171
No Yes Strigamia maritima 22   196 170
No Yes Sarcoptes scabiei   89 80
No Yes Tetranychus urticae Two-spotted spider mite 160 136
No Yes Ixodes scapularis (Preliminary) Black-legged tick 169 143
No Yes Pristionchus pacificus   128 114
No Yes Meloidogyne incognita Southern root-knot nematode 151 132
No Yes Meloidogyne hapla   102 86
No Yes Onchocerca volvulus 22   114 98
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 205 156
No Yes Caenorhabditis japonica   465 418
No Yes Caenorhabditis brenneri   247 205
No Yes Caenorhabditis remanei   300 251
No Yes Caenorhabditis elegans 76_235 Roundworm 234 192
No Yes Caenorhabditis briggsae 2   228 197
No Yes Trichinella spiralis 22   129 106
No Yes Hymenolepis microstoma   105 97
No Yes Echinococcus multilocularis   115 104
No Yes Echinococcus granulosus   106 97
No Yes Taenia solium Pork tapeworm 117 110
No Yes Schistosoma mansoni   123 116
No Yes Mnemiopsis leidyi Sea walnut 118 108
No Yes Thelohanellus kitauei   189 183
No Yes Acropora digitifera v1.0   144 131
No Yes Nematostella vectensis 1.0 Starlet sea anemone 241 211
No Yes Hydra vulgaris   284 259
No Yes Amphimedon queenslandica   200 176
No Yes Trichoplax adhaerens   83 67
No Yes Proterospongia sp. ATCC 50818   27 23
No Yes Monosiga brevicollis   30 26
No Yes Sphaeroforma arctica JP610   38 28
No Yes Capsaspora owczarzaki ATCC 30864   38 28
No Yes Conidiobolus coronatus NRRL28638 v1.0   73 58
No Yes Mortierella verticillata NRRL 6337   89 55
No Yes Phycomyces blakesleeanus   163 145
No Yes Rhizopus oryzae RA 99-880   386 361
No Yes Mucor circinelloides   89 69
No Yes Rhizomucor miehei CAU432   154 132
No Yes Malassezia globosa CBS 7966   36 26
No Yes Sporisorium reilianum 22   39 32
No Yes Ustilago maydis   37 27
No Yes Mixia osmundae IAM 14324 v1.0   22 16
No Yes Cronartium quercuum f. sp. fusiforme G11 v1.0   52 45
No Yes Puccinia graminis f. sp. tritici CRL 75-36-700-3   61 57
No Yes Melampsora laricis-populina   39 33
No Yes Rhodotorula graminis WP1 v1.0   26 20
No Yes Sporobolomyces roseus IAM 13481   20 16
No Yes Microbotryum violaceum 22   34 23
No Yes Wallemia sebi v1.0   22 17
No Yes Sphaerobolus stellatus v1.0   90 80
No Yes Piloderma croceum F 1598 v1.0   73 63
No Yes Serpula lacrymans var. lacrymans S7.9   45 34
No Yes Coniophora puteana   41 30
No Yes Hydnomerulius pinastri v2.0   49 40
No Yes Paxillus rubicundulus Ve08.2h10 v1.0   103 91
No Yes Pisolithus microcarpus 441 v1.0   60 52
No Yes Pisolithus tinctorius Marx 270 v1.0   65 53
No Yes Scleroderma citrinum Foug A v1.0   68 58
No Yes Coprinopsis cinerea okayama7 130 v3   43 33
No Yes Pleurotus ostreatus Oyster mushroom 47 34
No Yes Amanita thiersii Skay4041 v1.0   36 26
No Yes Amanita muscaria Koide v1.0 Fly agaric 57 45
No Yes Galerina marginata v1.0   51 39
No Yes Hebeloma cylindrosporum h7 v2.0   52 39
No Yes Laccaria bicolor S238N-H82   56 43
No Yes Agaricus bisporus var. bisporus   37 25
No Yes Schizophyllum commune   41 31
No Yes Stereum hirsutum FP-91666 SS1 v1.0   45 34
No Yes Heterobasidion annosum   32 24
No Yes Gloeophyllum trabeumv1.0   58 45
No Yes Punctularia strigosozonata v1.0   42 32
No Yes Sebacina vermifera MAFF 305830 v1.0   33 26
No Yes Fomitiporia mediterranea v1.0   44 31
No Yes Tulasnella calospora AL13/4D v1.0   44 38
No Yes Postia placenta   63 46
No Yes Wolfiporia cocos MD-104 SS10 v1.0   49 34
No Yes Fomitopsis pinicolav1.0   53 38
No Yes Fomitopsis pinicola FP-58527 SS1 v3.0   52 39
No Yes Phanerochaete chrysosporium RP-78 2.1   41 28
No Yes Dichomitus squalens   45 31
No Yes Trametes versicolor v1.0   50 36
No Yes Tremella mesenterica Witches' butter 33 29
No Yes Daldinia eschscholzii EC12 v1.0   37 30
No Yes Apiospora montagnei NRRL 25634 v1.0   50 36
No Yes Magnaporthe poae ATCC 64411 22   29 23
No Yes Magnaporthe grisea 70-15   38 30
No Yes Podospora anserina   46 35
No Yes Sporotrichum thermophile ATCC 42464   47 38
No Yes Thielavia terrestris NRRL 8126   44 33
No Yes Chaetomium globosum CBS 148.51   90 73
No Yes Neurospora tetrasperma   43 33
No Yes Neurospora discreta FGSC 8579   59 47
No Yes Neurospora crassa OR74A   43 32
No Yes Cryphonectria parasitica Chestnut blight fungus 39 30
No Yes Verticillium albo-atrum VaMs.102   27 24
No Yes Verticillium dahliae VdLs.17   45 36
No Yes Acremonium alcalophilumv 1.0   31 24
No Yes Glomerella graminicola 22   41 33
No Yes Fusarium graminearum   46 37
No Yes Nectria haematococca mpVI   60 49
No Yes Fusarium oxysporum f. sp. lycopersici 4286   54 44
No Yes Fusarium verticillioides 7600   43 35
No Yes Trichoderma asperellum CBS 433.97 v1.0   49 42
No Yes Trichoderma atroviride   44 36
No Yes Trichoderma citrinoviride v1.0   40 32
No Yes Trichoderma reesei 1.2   37 29
No Yes Trichoderma virens Gv29-8   46 37
No Yes Trichoderma longibrachiatum ATCC 18648 v1.0   42 34
No Yes Trichoderma harzianum CBS 226.95 v1.0   48 39
No Yes Amorphotheca resinae v1.0 Creosote fungus 39 31
No Yes Botrytis cinerea B05.10   51 44
No Yes Sclerotinia sclerotiorum   135 127
No Yes Blumeria graminis 22   34 26
No Yes Didymella exigua CBS 183.55 v1.0   64 59
No Yes Leptosphaeria maculans 22   36 30
No Yes Setosphaeria turcica v1.0   62 53
No Yes Cochliobolus miyabeanus ATCC 44560 v1.0   39 32
No Yes Cochliobolus victoriae FI3 v1.0   45 38
No Yes Cochliobolus carbonum 26-R-13 v1.0   45 38
No Yes Cochliobolus heterostrophus Southern corn leaf blight pathogen 29 25
No Yes Alternaria brassicicola   38 31
No Yes Cochliobolus lunatus m118 v2.0   42 35
No Yes Pyrenophora teres f. teres 22   50 43
No Yes Pyrenophora tritici-repentis   41 35
No Yes Stagonospora nodorum   36 31
No Yes Mycosphaerella graminicola IPO323   35 28
No Yes Zasmidium cellare ATCC 36951 v1.0   45 32
No Yes Dothistroma septosporum   34 29
No Yes Septoria musiva v1.0   34 29
No Yes Mycosphaerella fijiensis CIRAD86   36 29
No Yes Aureobasidium pullulans var. subglaciale EXF-2481 v1.0   47 38
No Yes Paracoccidioides brasiliensis Pb18   39 32
No Yes Coccidioides posadasii RMSCC 3488   48 39
No Yes Coccidioides immitis RS   46 37
No Yes Ajellomyces dermatitidis SLH14081   39 33
No Yes Histoplasma capsulatum class NAmI strain WU24   55 48
No Yes Microsporum canis CBS 113480   44 35
No Yes Trichophyton equinum CBS 127.97   41 32
No Yes Trichophyton verrucosum HKI 0517   38 31
No Yes Arthroderma benhamiae CBS 112371   41 34
No Yes Trichophyton tonsurans CBS 112818   44 35
No Yes Trichophyton rubrum CBS 118892   43 34
No Yes Uncinocarpus reesii 1704   35 30
No Yes Aspergillus zonatus v1.0   55 44
No Yes Penicillium chrysogenum Wisconsin 54-1255   51 44
No Yes Penicillium chrysogenum v1.0   43 36
No Yes Aspergillus acidus v1.0   42 34
No Yes Aspergillus fumigatus Af293   94 72
No Yes Aspergillus brasiliensis v1.0   45 38
No Yes Aspergillus nidulans FGSC A4   51 39
No Yes Aspergillus sydowii v1.0   53 44
No Yes Aspergillus versicolor v1.0   42 33
No Yes Aspergillus glaucus   41 33
No Yes Aspergillus carbonarius ITEM 5010   42 34
No Yes Neosartorya fischeri NRRL 181   36 29
No Yes Aspergillus terreus NIH2624   48 40
No Yes Aspergillus tubingensis v1.0   39 32
No Yes Aspergillus wentii v1.0   45 38
No Yes Aspergillus oryzae RIB40   45 38
No Yes Aspergillus niger 22   45 40
No Yes Aspergillus niger ATCC 1015   25 21
No Yes Aspergillus flavus NRRL3357   41 34
No Yes Aspergillus clavatus NRRL 1   33 27
No Yes Penicillium marneffei ATCC 18224   100 87
No Yes Tuber melanosporum Mel28 22   36 29
No Yes Tuber melanosporum Vittad Perigord truffle 60 53
No Yes Hansenula polymorpha v2.0   36 27
No Yes Dekkera bruxellensis CBS 2499 v2.0   33 25
No Yes Pichia membranifaciensv1.0   37 28
No Yes Candida tanzawaensis NRRL Y-17324 v1.0   34 25
No Yes Candida dubliniensis CD36   37 28
No Yes Candida tropicalis MYA-3404   36 28
No Yes Candida parapsilosis   34 26
No Yes Candida albicans SC5314   41 30
No Yes Lodderomyces elongisporus NRRL YB-4239   31 23
No Yes Babjeviella inositovora NRRL Y-12698 v1.0   34 25
No Yes Pichia stipitis CBS 6054   34 25
No Yes Candida guilliermondii ATCC 6260   34 25
No Yes Hyphopichia burtonii NRRL Y-1933 v1.0   34 25
No Yes Debaromyces hansenii   34 24
No Yes Wickerhamomyces anomalus   40 31
No Yes Pichia pastoris GS115   34 24
No Yes Hanseniaspora valbyensis NRRL Y-1626 v1.1   26 20
No Yes Yarrowia lipolytica CLIB122   44 33
No Yes Candida lusitaniae ATCC 42720   35 26
No Yes Metschnikowia bicuspidata NRRL YB-4993 v1.0   29 21
No Yes Vanderwaltozyma polyspora DSM 70294   38 28
No Yes Candida glabrata CBS138   39 28
No Yes Kluyveromyces thermotolerans CBS 6340   32 23
No Yes Lachancea kluyveri   34 25
No Yes Kluyveromyces waltii   33 24
No Yes Ashbya gossypii ATCC 10895   34 26
No Yes Zygosaccharomyces rouxii   33 24
No Yes Saccharomyces mikatae MIT   40 31
No Yes Saccharomyces paradoxus MIT   40 31
No Yes Saccharomyces cerevisiae 76 Baker's yeast 39 31
No Yes Saccharomyces bayanus MIT   36 28
No Yes Kluyveromyces lactis   33 24
No Yes Schizosaccharomyces cryophilus OY26 22   35 24
No Yes Schizosaccharomyces octosporus yFS286   37 26
No Yes Schizosaccharomyces japonicus yFS275   27 21
No Yes Schizosaccharomyces pombe Fission yeast 36 25
No Yes Catenaria anguillulae PL171 v1.0   36 33
No Yes Allomyces macrogynus ATCC 38327   73 63
No Yes Spizellomyces punctatus DAOM BR117   60 48
No Yes Dictyostelium discoideum   71 54
No Yes Dictyostelium purpureum   99 72
No Yes Entamoeba dispar 1.2   42 38
No Yes Entamoeba invadens 1.2   56 54
No Yes Entamoeba histolytica 1   46 41
No Yes Selaginella moellendorffii   286 264
No Yes Pinus taeda Loblolly pine 541 516
No Yes Picea abies Norway spruce 325 313
No Yes Eucalyptus grandis v201 Rose gum 520 483
No Yes Theobroma cacao B97-61/B2 v1 Cacao 376 350
No Yes Gossypium raimondii v221   1250 1143
No Yes Citrus clementina v165   515 479
No Yes Citrus sinensis v154 Sweet orange 597 557
No Yes Thellungiella halophila v173   471 435
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 761 704
No Yes Capsella rubella v183   492 453
No Yes Arabidopsis lyrata Lyrate rockcress 443 402
No Yes Arabidopsis thaliana 10 Thale cress 603 547
No Yes Carica papaya Papaya 310 291
No Yes Medicago truncatula Barrel medic 731 683
No Yes Phaseolus vulgaris v186 French bean 593 555
No Yes Glycine max v109 Soybean 1074 1008
No Yes Cucumis sativus v122 Cucumber 514 474
No Yes Fragaria vesca Wild strawberry 365 338
No Yes Malus domestica v196 Apple 753 709
No Yes Prunus persica v139 Peach 363 338
No Yes Linum usitatissimum v200 Flax 665 610
No Yes Manihot esculenta v147 Cassava 586 554
No Yes Populus trichocarpa v156 Black cottonwood 690 645
No Yes Vitis vinifera Wine grape 378 351
No Yes Mimulus guttatus v140 Spotted monkey flower 411 387
No Yes Solanum lycopersicum v.2.3 Tomato 471 441
No Yes Solanum tuberosum Potato 568 532
No Yes Actinidia chinensis Hongyang   542 499
No Yes Aquilegia coerulea v195   473 418
No Yes Triticum urartu 22   319 301
No Yes Triticum aestivum 22 Bread wheat 921 870
No Yes Aegilops tauschii 22   384 362
No Yes Brachypodium distachyon Stiff brome 409 382
No Yes Oryza barthii 22 African wild rice 419 381
No Yes Oryza meridionalis 22   453 399
No Yes Oryza glumaepatula 22   465 422
No Yes Oryza glaberrima African rice 352 322
No Yes Oryza punctata 22   496 429
No Yes Oryza nivara 22   482 436
No Yes Oryza brachyantha 22 Malo sina 375 350
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 542 508
No Yes Oryza sativa v193 Rice 542 507
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 469 437
No Yes Panicum virgatum v202 Switchgrass 660 616
No Yes Setaria italica v164 Foxtail millet 452 421
No Yes Zea mays subsp. mays Maize 722 676
No Yes Zea mays v181 Maize 801 752
No Yes Sorghum bicolor Sorghum 396 371
No Yes Musa balbisiana Balbis banana 755 711
No Yes Musa acuminata 22 Wild Malaysian banana 785 746
No Yes Amborella trichopoda 22   230 215
No Yes Physcomitrella patens   298 256
No Yes Coccomyxa subellipsoidea sp. C-169 v2   42 35
No Yes Asterochloris sp. Cgr/DA1pho v1.0   38 32
No Yes Chlorella variabilis sp. NC64A   47 40
No Yes Chlorella vulgaris   40 33
No Yes Volvox carteri f. nagariensis   59 53
No Yes Volvox carteri v199   42 35
No Yes Chlamydomonas reinhardtii 4.0   53 45
No Yes Ostreococcus sp. RCC809   51 44
No Yes Ostreococcus lucimarinus CCE9901   55 45
No Yes Ostreococcus tauri   54 45
No Yes Bathycoccus prasinos   52 43
No Yes Micromonas sp. RCC299   58 47
No Yes Micromonas pusilla CCMP1545 v3.0   68 53
No Yes Cyanidioschyzon merolae strain 10D 22   57 45
No Yes Cyanidioschyzon merolae   57 45
No Yes Porphyridium purpureum 02_2012   83 75
No Yes Thecamonas trahens ATCC 50062   37 30
No Yes Bigelowiella natans CCMP2755 22   63 55
No Yes Giardia lamblia 2.3   26 25
No Yes Cyanophora paradoxa   42 38
No Yes Leishmania mexicana 2.4   5 5
No Yes Leishmania major strain Friedlin   5 5
No Yes Leishmania infantum JPCM5 2.4   6 6
No Yes Leishmania braziliensis MHOM/BR/75/M2904 2.4   6 6
No Yes Trypanosoma vivax   5 5
No Yes Trypanosoma cruzi strain CL Brener   10 9
No Yes Trypanosoma congolense 2.4   5 5
No Yes Trypanosoma brucei gambiense v4.1   6 6
No Yes Trypanosoma brucei TREU927 v4.1   6 6
No Yes Ectocarpus siliculosus   101 67
No Yes Aureococcus anophagefferens   70 54
No Yes Albugo laibachii 22   174 147
No Yes Pythium iwayamai DAOM BR242034 22   173 148
No Yes Pythium arrhenomanes ATCC 12531 22   155 131
No Yes Pythium ultimum v1.7-2   189 158
No Yes Pythium aphanidermatum DAOM BR444 22   141 115
No Yes Pythium irregulare DAOM BR486 22   218 188
No Yes Pythium vexans DAOM BR484 22   124 104
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 165 141
No Yes Phytophthora sojae 1.1   215 185
No Yes Phytophthora infestans T30-4   179 155
No Yes Phytophthora capsici   149 130
No Yes Hyaloperonospora arabidopsidis 22   89 73
No Yes Phaeodactylum tricornutumCCAP 1055/1   53 41
No Yes Fragilariopsis cylindrus   119 91
No Yes Thalassiosira pseudonana CCMP1335   58 49
No Yes Perkinsus marinus ATCC 50983   43 38
No Yes Paramecium tetraurelia   576 392
No Yes Tetrahymena thermophila SB210 1   58 40
No Yes Ichthyophthirius multifiliis strain G5   35 28
No Yes Cryptosporidium hominis   19 16
No Yes Cryptosporidium muris   22 15
No Yes Cryptosporidium parvum Iowa II   23 16
No Yes Neospora caninum   22 17
No Yes Toxoplasma gondii VEG   19 14
No Yes Toxoplasma gondii ME49   20 15
No Yes Toxoplasma gondii GT1   20 15
No Yes Babesia bovis T2Bo   32 24
No Yes Theileria parva   15 12
No Yes Theileria annulata   17 13
No Yes Plasmodium falciparum 3D7   15 12
No Yes Plasmodium vivax SaI-1 7.0   14 11
No Yes Plasmodium knowlesi strain H   13 10
No Yes Plasmodium yoelii ssp. yoelii 1   13 11
No Yes Plasmodium chabaudi   13 11
No Yes Plasmodium berghei ANKA   14 12
No Yes Symbiodinium minutum clade B1 v1.2   11 8
No Yes Naegleria gruberi   69 56
No Yes Trichomonas vaginalis   609 512
No Yes Guillardia theta CCMP2712 v1.0   179 166
No Yes Emiliania huxleyi CCMP1516   229 196
No Yes Acholeplasma laidlawii PG-8A   6 6
No Yes Thermobaculum terrenum ATCC BAA-798   14 10
No Yes Leptolyngbya sp. PCC 7376   128 126
No Yes Pseudanabaena sp. PCC 7367   19 18
No Yes Acaryochloris marina MBIC11017   138 119
No Yes Synechocystis sp. PCC 6803   49 46
No Yes Thermosynechococcus sp. NK55   2 2
No Yes Thermosynechococcus elongatus BP-1   15 15
No Yes Synechococcus sp. PCC 7502   25 23
No Yes Synechococcus sp. PCC 6312   26 26
No Yes Synechococcus sp. CC9311   1 1
No Yes Synechococcus elongatus PCC 7942   3 3
No Yes Microcoleus sp. PCC 7113   18 16
No Yes Trichodesmium erythraeum IMS101   77 77
No Yes Geitlerinema sp. PCC 7407   7 7
No Yes Cyanothece sp. PCC 8802   31 31
No Yes Gloeocapsa sp. PCC 7428   112 74
No Yes Halothece sp. PCC 7418   12 11
No Yes Microcystis aeruginosa NIES-843   137 136
No Yes Gloeobacter violaceus PCC 7421   55 45
No Yes Rivularia sp. PCC 7116   68 51
No Yes Calothrix sp. PCC 7507   48 40
No Yes Anabaena variabilis ATCC 29413   56 50
No Yes 'Nostoc azollae' 0708   10 9
No Yes Nostoc sp. PCC 7107   39 32
No Yes Nostoc punctiforme PCC 73102   64 55
No Yes Nostoc sp. PCC 7120   85 63
No Yes Nostoc sp. PCC 7524   67 55
No Yes Anabaena sp. 90   17 16
No Yes Mesoplasma florum L1   8 8
No Yes Ureaplasma parvum serovar 3 str. ATCC 27815   1 1
No Yes Ureaplasma urealyticum serovar 10 str. ATCC 33699   1 1
No Yes Mycoplasma leachii 99/014/6   6 5
No Yes Mycoplasma mycoides subsp. capri LC str. 95010   18 15
No Yes Mycoplasma capricolum subsp. capricolum ATCC 27343   5 4
No Yes Mycoplasma crocodyli MP145   4 4
No Yes Mycoplasma conjunctivae HRC/581   2 2
No Yes Mycoplasma bovis HB0801   4 4
No Yes Mycoplasma penetrans HF-2   2 2
No Yes Mycoplasma putrefaciens KS1   4 4
No Yes Mycoplasma fermentans M64   9 9
No Yes Mycoplasma agalactiae PG2   1 1
No Yes Mycoplasma synoviae 53   1 1
No Yes Mycoplasma pulmonis UAB CTIP   3 3
No Yes Mycoplasma hyorhinis GDL-1   3 3
No Yes Mycoplasma hyopneumoniae 168   2 2
No Yes Conexibacter woesei DSM 14684   140 132
No Yes Cryptobacterium curtum DSM 15641   12 11
No Yes Eggerthella sp. YY7918   41 37
No Yes Eggerthella lenta DSM 2243   47 40
No Yes Slackia heliotrinireducens DSM 20476   49 48
No Yes Olsenella uli DSM 7084   19 14
No Yes Atopobium parvulum DSM 20469   10 8
No Yes Coriobacterium glomerans PW2   33 29
No Yes Rubrobacter xylanophilus DSM 9941   25 24
No Yes Ilumatobacter coccineus   67 61
No Yes Acidimicrobium ferrooxidans DSM 10331   33 33
No Yes Thermobispora bispora DSM 43833   53 49
No Yes Nakamurella multipartita DSM 44233   94 91
No Yes Acidothermus cellulolyticus 11B   7 7
No Yes Modestobacter marinus   87 81
No Yes Blastococcus saxobsidens DD2   43 42
No Yes Geodermatophilus obscurus DSM 43160   53 49
No Yes Kineococcus radiotolerans SRS30216   84 76
No Yes Catenulispora acidiphila DSM 44928   228 201
No Yes Stackebrandtia nassauensis DSM 44728   192 167
No Yes Frankia symbiont of Datisca glomerata   174 169
No Yes Frankia sp. EAN1pec   251 231
No Yes Frankia alni ACN14a   136 127
No Yes Thermobifida fusca YX   24 23
No Yes Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111   140 130
No Yes Thermomonospora curvata DSM 43183   83 80
No Yes Streptosporangium roseum DSM 43021   274 253
No Yes Kitasatospora setae KM-6054   148 135
No Yes Streptomyces coelicolor A3(2)   227 206
No Yes Streptomyces sp. PAMC26508   134 119
No Yes Streptomyces flavogriseus ATCC 33331   143 128
No Yes Streptomyces sp. SirexAA-E   166 150
No Yes Streptomyces griseus subsp. griseus NBRC 13350   155 140
No Yes Streptomyces bingchenggensis BCW-1   279 249
No Yes Streptomyces violaceusniger Tu 4113   270 247
No Yes Streptomyces avermitilis MA-4680   180 160
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488   202 187
No Yes Streptomyces scabiei 87.22   179 164
No Yes Streptomyces hygroscopicus subsp. jinggangensis 5008   253 233
No Yes Actinosynnema mirum DSM 43827   185 168
No Yes Saccharomonospora viridis DSM 43017   65 63
No Yes Pseudonocardia dioxanivorans CB1190   173 159
No Yes Saccharopolyspora erythraea NRRL 2338   187 171
No Yes Amycolatopsis mediterranei U32   325 302
No Yes Kribbella flavida DSM 17836   186 156
No Yes Nocardioides sp. JS614   66 62
No Yes Propionibacterium propionicum F0230a   48 46
No Yes Propionibacterium acnes SK137   14 14
No Yes Microlunatus phosphovorus NM-1   128 116
No Yes Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1   58 58
No Yes Salinispora arenicola CNS-205   77 67
No Yes Salinispora tropica CNB-440   77 67
No Yes Verrucosispora maris AB-18-032   101 85
No Yes Micromonospora sp. L5   99 88
No Yes Micromonospora aurantiaca ATCC 27029   105 94
No Yes Actinoplanes sp. N902-109   201 177
No Yes Actinoplanes sp. SE50/110   178 166
No Yes Actinoplanes missouriensis 431   181 163
No Yes Segniliparus rotundus DSM 44985   28 26
No Yes Tsukamurella paurometabola DSM 20162   140 130
No Yes Gordonia sp. KTR9   153 142
No Yes Gordonia polyisoprenivorans VH2   161 146
No Yes Gordonia bronchialis DSM 43247   171 159
No Yes Rhodococcus jostii RHA1   293 271
No Yes Rhodococcus equi 103S   129 124
No Yes Rhodococcus opacus B4   229 212
No Yes Rhodococcus erythropolis PR4   241 225
No Yes Nocardia cyriacigeorgica GUH-2   193 180
No Yes Nocardia farcinica IFM 10152   215 198
No Yes Amycolicicoccus subflavus DQS3-9A1   141 133
No Yes Mycobacterium massiliense str. GO 06   50 48
No Yes Mycobacterium abscessus ATCC 19977   184 175
No Yes Mycobacterium sp. JLS   212 197
No Yes Mycobacterium intracellulare ATCC 13950   173 160
No Yes Mycobacterium avium 104   169 162
No Yes Mycobacterium vanbaalenii PYR-1   210 197
No Yes Mycobacterium canettii CIPT 140010059   65 63
No Yes Mycobacterium africanum GM041182   67 65
No Yes Mycobacterium tuberculosis KZN 1435   79 77
No Yes Mycobacterium tuberculosis   72 70
No Yes Mycobacterium bovis BCG str. Pasteur 1173P2   65 63
No Yes Mycobacterium rhodesiae NBB3   188 177
No Yes Mycobacterium ulcerans Agy99   102 97
No Yes Mycobacterium gilvum PYR-GCK   189 176
No Yes Mycobacterium chubuense NBB4   171 161
No Yes Mycobacterium marinum M   167 162
No Yes Mycobacterium smegmatis str. MC2 155   234 215
No Yes Mycobacterium leprae Br4923   10 10
No Yes Corynebacterium resistens DSM 45100   16 16
No Yes Corynebacterium aurimucosum ATCC 700975   52 51
No Yes Corynebacterium kroppenstedtii DSM 44385   14 14
No Yes Corynebacterium efficiens YS-314   41 39
No Yes Corynebacterium ulcerans 0102   17 16
No Yes Corynebacterium urealyticum DSM 7109   27 26
No Yes Corynebacterium jeikeium K411   38 37
No Yes Corynebacterium variabile DSM 44702   84 76
No Yes Corynebacterium pseudotuberculosis 316   15 14
No Yes Corynebacterium glutamicum R   39 36
No Yes Corynebacterium diphtheriae NCTC 13129   24 24
No Yes Sanguibacter keddieii DSM 10542   70 66
No Yes Kytococcus sedentarius DSM 20547   44 41
No Yes Beutenbergia cavernae DSM 12333   89 78
No Yes Leifsonia xyli subsp. xyli str. CTCB07   39 39
No Yes Microbacterium testaceum StLB037   54 48
No Yes Clavibacter michiganensis subsp. michiganensis NCPPB 382   35 35
No Yes Jonesia denitrificans DSM 20603   23 23
No Yes Intrasporangium calvum DSM 43043   35 32
No Yes Brachybacterium faecium DSM 4810   35 33
No Yes Isoptericola variabilis 225   29 29
No Yes Xylanimonas cellulosilytica DSM 15894   44 40
No Yes Cellulomonas flavigena DSM 20109   53 46
No Yes Cellulomonas fimi ATCC 484   61 55
No Yes [Cellvibrio] gilvus ATCC 13127   54 52
No Yes Arthrobacter phenanthrenivorans Sphe3   69 67
No Yes Arthrobacter chlorophenolicus A6   59 54
No Yes Arthrobacter aurescens TC1   67 60
No Yes Arthrobacter arilaitensis Re117   60 57
No Yes Kocuria rhizophila DC2201   33 33
No Yes Rothia mucilaginosa DY-18   10 10
No Yes Rothia dentocariosa ATCC 17931   20 20
No Yes Arthrobacter sp. Rue61a   91 82
No Yes Arthrobacter sp. FB24   59 55
No Yes Renibacterium salmoninarum ATCC 33209   123 121
No Yes Micrococcus luteus NCTC 2665   28 27
No Yes Bifidobacterium longum subsp. longum JDM301   16 16
No Yes Bifidobacterium animalis subsp. lactis Bl-04   7 7
No Yes Bifidobacterium dentium Bd1   31 26
No Yes Bifidobacterium breve ACS-071-V-Sch8b   21 17
No Yes Bifidobacterium bifidum S17   12 11
No Yes Bifidobacterium adolescentis ATCC 15703   26 23
No Yes Arcanobacterium haemolyticum DSM 20595   20 20
No Yes Mobiluncus curtisii ATCC 43063   10 10
No Yes Actinomyces sp. F0330   57 53
No Yes Caldilinea aerophila DSM 14535 = NBRC 104270   26 21
No Yes Dehalococcoides ethenogenes 195   8 8
No Yes Dehalococcoides sp. BAV1   8 8
No Yes Dehalogenimonas lykanthroporepellens BL-DC-9   16 16
No Yes Anaerolinea thermophila UNI-1   13 11
No Yes Thermomicrobium roseum DSM 5159   3 3
No Yes Sphaerobacter thermophilus DSM 20745   11 11
No Yes Herpetosiphon aurantiacus DSM 785   70 56
No Yes Roseiflexus sp. RS-1   31 31
No Yes Roseiflexus castenholzii DSM 13941   20 18
No Yes Chloroflexus sp. MS-G   10 9
No Yes Chloroflexus sp. Y-400-fl   11 9
No Yes Chloroflexus aggregans DSM 9485   9 7
No Yes Chloroflexus aurantiacus J-10-fl   14 11
No Yes Truepera radiovictrix DSM 17093   9 8
No Yes Deinococcus gobiensis I-0   27 26
No Yes Deinococcus deserti VCD115   26 24
No Yes Deinococcus maricopensis DSM 21211   25 23
No Yes Deinococcus geothermalis DSM 11300   17 15
No Yes Deinococcus proteolyticus MRP   17 16
No Yes Deinococcus radiodurans R1   19 19
No Yes Oceanithermus profundus DSM 14977   6 6
No Yes Marinithermus hydrothermalis DSM 14884   8 8
No Yes Meiothermus silvanus DSM 9946   81 79
No Yes Meiothermus ruber DSM 1279   12 12
No Yes Thermus sp. CCB_US3_UF1   7 7
No Yes Thermus scotoductus SA-01   10 10
No Yes Thermus thermophilus HB27   9 9
No Yes Anaerococcus prevotii DSM 20548   19 15
No Yes Finegoldia magna ATCC 29328   14 13
No Yes Veillonella parvula DSM 2008   8 5
No Yes Megasphaera elsdenii DSM 20460   21 20
No Yes Acidaminococcus intestini RyC-MR95   19 14
No Yes Acidaminococcus fermentans DSM 20731   12 11
No Yes Megamonas hypermegale   26 19
No Yes Selenomonas sputigena ATCC 35185   6 6
No Yes Selenomonas ruminantium subsp. lactilytica TAM6421   23 19
No Yes Erysipelothrix rhusiopathiae str. Fujisawa   35 29
No Yes Natranaerobius thermophilus JW/NM-WN-LF   46 45
No Yes Symbiobacterium thermophilum IAM 14863   32 30
No Yes Clostridiales genomosp. BVAB3 str. UPII9-5   24 17
No Yes Clostridium clariflavum DSM 19732   40 30
No Yes Eubacterium siraeum   28 21
No Yes Clostridium cellulolyticum H10   116 89
No Yes Clostridium thermocellum ATCC 27405   40 33
No Yes Ethanoligenens harbinense YUAN-3   30 25
No Yes Faecalibacterium prausnitzii   37 25
No Yes Ruminococcus sp.   56 38
No Yes Ruminococcus bromii   18 13
No Yes Ruminococcus albus 7   53 40
No Yes Thermaerobacter marianensis DSM 12885   12 12
No Yes Sulfobacillus acidophilus DSM 10332   46 46
No Yes Oscillibacter valericigenes Sjm18-20   122 112
No Yes butyrate-producing bacterium SS3/4   21 18
No Yes butyrate-producing bacterium SM4/1   25 19
No Yes Candidatus Desulforudis audaxviator MP104C   5 5
No Yes Thermincola potens JR   29 25
No Yes Pelotomaculum thermopropionicum SI   31 30
No Yes Desulfosporosinus acidiphilus SJ4   71 64
No Yes Desulfosporosinus orientis DSM 765   143 123
No Yes Dehalobacter sp. DCA   20 18
No Yes Dehalobacter sp. CF   22 20
No Yes Syntrophobotulus glycolicus DSM 8271   51 44
No Yes Desulfitobacterium hafniense Y51   124 106
No Yes Desulfitobacterium dehalogenans ATCC 51507   63 57
No Yes Desulfotomaculum reducens MI-1   36 34
No Yes Desulfotomaculum acetoxidans DSM 771   64 61
No Yes Desulfotomaculum kuznetsovii DSM 6115   33 32
No Yes Desulfotomaculum carboxydivorans CO-1-SRB   27 27
No Yes Desulfotomaculum ruminis DSM 2154   75 62
No Yes Acetobacterium woodii DSM 1030   98 84
No Yes Eubacterium eligens ATCC 27750   32 21
No Yes Eubacterium limosum KIST612   87 73
No Yes Clostridium difficile 630   74 61
No Yes Clostridium sticklandii DSM 519   17 15
No Yes Filifactor alocis ATCC 35896   13 12
No Yes Clostridium saccharolyticum WM1   124 86
No Yes Clostridium phytofermentans ISDg   133 89
No Yes Clostridium lentocellum DSM 5427   115 83
No Yes [Ruminococcus] obeum   51 36
No Yes [Ruminococcus] torques   56 41
No Yes Eubacterium rectale M104/1   49 33
No Yes Eubacterium rectale ATCC 33656   53 35
No Yes Coprococcus sp. ART55/1   33 22
No Yes Roseburia hominis A2-183   74 45
No Yes Roseburia intestinalis   71 47
No Yes Butyrivibrio proteoclasticus B316   64 43
No Yes Butyrivibrio fibrisolvens   26 20
No Yes Syntrophothermus lipocalidus DSM 12680   26 26
No Yes Syntrophomonas wolfei subsp. wolfei str. Goettingen   21 20
No Yes Heliobacterium modesticaldum Ice1   18 18
No Yes Alkaliphilus oremlandii OhILAs   62 49
No Yes Alkaliphilus metalliredigens QYMF   82 69
No Yes Candidatus Arthromitus sp. SFB-mouse-Japan   8 7
No Yes Clostridium sp. BNL1100   84 50
No Yes Clostridium novyi NT   17 13
No Yes Clostridium ljungdahlii DSM 13528   68 58
No Yes Clostridium kluyveri DSM 555   58 50
No Yes Clostridium beijerinckii NCIMB 8052   154 120
No Yes Clostridium tetani E88   33 28
No Yes Clostridium perfringens ATCC 13124   27 18
No Yes Clostridium cellulovorans 743B   109 75
No Yes Clostridium botulinum A str. ATCC 3502   66 55
No Yes Clostridium acetobutylicum ATCC 824   48 43
No Yes Mahella australiensis 50-1 BON   91 59
No Yes Thermosediminibacter oceani DSM 16646   29 28
No Yes Caldicellulosiruptor obsidiansis OB47   42 28
No Yes Caldicellulosiruptor kronotskyensis 2002   45 27
No Yes Caldicellulosiruptor hydrothermalis 108   45 27
No Yes Caldicellulosiruptor owensensis OL   27 16
No Yes Caldicellulosiruptor lactoaceticus 6A   36 26
No Yes Caldicellulosiruptor kristjanssonii 177R1B   37 25
No Yes Caldicellulosiruptor saccharolyticus DSM 8903   80 61
No Yes Caldicellulosiruptor bescii DSM 6725   39 26
No Yes Thermoanaerobacterium xylanolyticum LX-11   16 13
No Yes Thermoanaerobacterium thermosaccharolyticum DSM 571   25 21
No Yes Thermodesulfobium narugense DSM 14796   9 9
No Yes Coprothermobacter proteolyticus DSM 5265   4 3
No Yes Tepidanaerobacter acetatoxydans Re1   31 28
No Yes Thermoanaerobacter tengcongensis MB4   18 16
No Yes Carboxydothermus hydrogenoformans Z-2901   18 17
No Yes Moorella thermoacetica ATCC 39073   24 22
No Yes Ammonifex degensii KC4   26 26
No Yes Thermoanaerobacter mathranii subsp. mathranii str. A3   14 11
No Yes Thermoanaerobacter pseudethanolicus ATCC 33223   21 21
No Yes Thermoanaerobacter sp. X514   22 19
No Yes Thermoanaerobacter italicus Ab9   13 10
No Yes Thermoanaerobacter wiegelii Rt8.B1   27 24
No Yes Thermoanaerobacter brockii subsp. finnii Ako-1   16 16
No Yes Acetohalobium arabaticum DSM 5501   16 15
No Yes Halothermothrix orenii H 168   23 20
No Yes Halanaerobium hydrogeniformans   49 45
No Yes Halanaerobium praevalens DSM 2228   24 23
No Yes Carnobacterium sp. 17-4   28 21
No Yes Carnobacterium sp. WN1359   22 19
No Yes Aerococcus urinae ACS-120-V-Col10a   40 37
No Yes Tetragenococcus halophilus NBRC 12172   37 34
No Yes Melissococcus plutonius DAT561   20 15
No Yes Enterococcus sp. 7L76   33 27
No Yes Enterococcus hirae ATCC 9790   27 23
No Yes Enterococcus faecium Aus0004   52 44
No Yes Enterococcus faecalis 62   46 38
No Yes Weissella koreensis KACC 15510   13 12
No Yes Oenococcus oeni PSU-1   28 23
No Yes Leuconostoc sp. C2   15 14
No Yes Leuconostoc kimchii IMSNU 11154   23 21
No Yes Leuconostoc citreum KM20   29 27
No Yes Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293   26 21
No Yes Leuconostoc gasicomitatum LMG 18811   22 19
No Yes Lactobacillus casei ATCC 334   38 38
No Yes Lactobacillus kefiranofaciens ZW3   26 22
No Yes Lactobacillus crispatus ST1   23 21
No Yes Lactobacillus rhamnosus Lc 705   26 26
No Yes Lactobacillus johnsonii FI9785   25 19
No Yes Lactobacillus sanfranciscensis TMW 1.1304   37 26
No Yes Lactobacillus salivarius CECT 5713   17 16
No Yes Lactobacillus ruminis ATCC 27782   20 19
No Yes Lactobacillus fermentum IFO 3956   30 29
No Yes Lactobacillus amylovorus GRL1118   22 20
No Yes Lactobacillus sakei subsp. sakei 23K   22 21
No Yes Lactobacillus reuteri DSM 20016   11 10
No Yes Lactobacillus gasseri ATCC 33323   18 16
No Yes Lactobacillus plantarum JDM1   44 43
No Yes Lactobacillus helveticus DPC 4571   12 10
No Yes Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365   12 12
No Yes Lactobacillus buchneri NRRL B-30929   36 33
No Yes Lactobacillus buchneri   29 25
No Yes Lactobacillus brevis ATCC 367   34 32
No Yes Lactobacillus acidophilus 30SC   26 23
No Yes Pediococcus claussenii ATCC BAA-344   38 36
No Yes Pediococcus pentosaceus ATCC 25745   26 21
No Yes Lactococcus garvieae ATCC 49156   30 30
No Yes Lactococcus lactis subsp. cremoris MG1363   60 56
No Yes Streptococcus sp. I-P16   17 15
No Yes Streptococcus sp. I-G2   19 16
No Yes Streptococcus intermedius JTH08   18 16
No Yes Streptococcus gallolyticus UCN34   40 36
No Yes Streptococcus pseudopneumoniae IS7493   16 16
No Yes Streptococcus pasteurianus ATCC 43144   29 24
No Yes Streptococcus equi subsp. equi 4047   62 60
No Yes Streptococcus dysgalactiae subsp. equisimilis GGS_124   31 25
No Yes Streptococcus infantarius subsp. infantarius CJ18   32 28
No Yes Streptococcus macedonicus ACA-DC 198   29 27
No Yes Streptococcus mitis B6   14 13
No Yes Streptococcus uberis 0140J   15 13
No Yes Streptococcus parauberis KCTC 11537   20 19
No Yes Streptococcus parasanguinis ATCC 15912   20 18
No Yes Streptococcus pyogenes str. Manfredo   21 17
No Yes Streptococcus pneumoniae P1031   21 20
No Yes Streptococcus agalactiae A909   25 20
No Yes Streptococcus mutans NN2025   28 26
No Yes Streptococcus thermophilus LMD-9   22 22
No Yes Streptococcus suis P1/7   17 15
No Yes Streptococcus sanguinis SK36   31 27
No Yes Streptococcus salivarius 57.I   28 27
No Yes Streptococcus oralis Uo5   15 14
No Yes Streptococcus gordonii str. Challis substr. CH1   25 22
No Yes Exiguobacterium sp. MH3   21 19
No Yes Exiguobacterium sp. AT1b   28 22
No Yes Exiguobacterium sibiricum 255-15   23 18
No Yes Kyrpidia tusciae DSM 2912   30 30
No Yes Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446   25 22
No Yes Brevibacillus brevis NBRC 100599   116 99
No Yes Paenibacillus sp. JDR-2   441 277
No Yes Paenibacillus terrae HPL-003   174 128
No Yes Paenibacillus mucilaginosus 3016   401 251
No Yes Paenibacillus polymyxa M1   170 116
No Yes Bacillus selenitireducens MLS10   39 35
No Yes Listeria welshimeri serovar 6b str. SLCC5334   29 24
No Yes Listeria innocua Clip11262   43 36
No Yes Listeria seeligeri serovar 1/2b str. SLCC3954   30 24
No Yes Listeria monocytogenes serotype 4b str. CLIP 80459   42 35
No Yes Listeria ivanovii subsp. ivanovii PAM 55   34 30
No Yes Solibacillus silvestris StLB046   53 49
No Yes Geobacillus thermoglucosidasius C56-YS93   53 46
No Yes Lysinibacillus sphaericus C3-41   78 59
No Yes Oceanobacillus iheyensis HTE831   43 39
No Yes Anoxybacillus flavithermus WK1   37 34
No Yes Geobacillus thermoleovorans CCB_US3_UF5   39 35
No Yes Geobacillus kaustophilus HTA426   45 38
No Yes Geobacillus sp. GHH01   56 49
No Yes Geobacillus sp. WCH70   28 26
No Yes Geobacillus thermodenitrificans NG80-2   51 46
No Yes Halobacillus halophilus DSM 2266   40 36
No Yes Bacillus sp. JS   49 38
No Yes Bacillus sp. 1NLA3E   56 52
No Yes Bacillus amyloliquefaciens FZB42   40 34
No Yes Bacillus atrophaeus 1942   44 36
No Yes Bacillus subtilis subsp. subtilis str. 168   53 41
No Yes Bacillus licheniformis DSM 13 = ATCC 14580   61 53
No Yes Bacillus halodurans C-125   92 69
No Yes Bacillus weihenstephanensis KBAB4   68 59
No Yes Bacillus thuringiensis str. Al Hakam   64 55
No Yes Bacillus cereus 03BB102   65 58
No Yes Bacillus anthracis str. A0248   60 52
No Yes Bacillus pseudofirmus OF4   41 38
No Yes Bacillus clausii KSM-K16   97 72
No Yes Bacillus cellulosilyticus DSM 2522   42 31
No Yes Bacillus pumilus SAFR-032   55 48
No Yes Bacillus megaterium DSM 319   56 48
No Yes Bacillus coagulans 2-6   21 19
No Yes Macrococcus caseolyticus JCSC5402   8 7
No Yes Staphylococcus pseudintermedius HKU10-03   13 10
No Yes Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305   32 27
No Yes Staphylococcus lugdunensis HKU09-01   24 23
No Yes Staphylococcus haemolyticus JCSC1435   30 27
No Yes Staphylococcus epidermidis RP62A   16 15
No Yes Staphylococcus carnosus subsp. carnosus TM300   21 19
No Yes Staphylococcus aureus subsp. aureus JH1   22 19
No Yes Staphylococcus aureus   22 19
No Yes Candidatus Cloacamonas acidaminovorans   10 10
No Yes Gemmatimonas aurantiaca T-27   55 49
No Yes Melioribacter roseus P3M   27 27
No Yes Ignavibacterium album JCM 16511   25 25
No Yes Pelodictyon phaeoclathratiforme BU-1   23 23
No Yes Chlorobium luteolum DSM 273   12 12
No Yes Chlorobium chlorochromatii CaD3   5 5
No Yes Chlorobium phaeobacteroides DSM 266   48 48
No Yes Chlorobium phaeovibrioides DSM 265   15 15
No Yes Chlorobium limicola DSM 245   13 13
No Yes Chlorobaculum parvum NCIB 8327   3 3
No Yes Chlorobium tepidum TLS   3 3
No Yes Chloroherpeton thalassium ATCC 35110   25 20
No Yes Prosthecochloris aestuarii DSM 271   21 21
No Yes Haliscomenobacter hydrossis DSM 1100   111 94
No Yes Saprospira grandis str. Lewin   37 35
No Yes Niastella koreensis GR20-10   198 161
No Yes Chitinophaga pinensis DSM 2588   278 237
No Yes Salinibacter ruber M8   41 39
No Yes Rhodothermus marinus DSM 4252   21 20
No Yes Flexibacter litoralis DSM 6794   24 20
No Yes Candidatus Amoebophilus asiaticus 5a2   32 31
No Yes Candidatus Cardinium hertigii   13 13
No Yes Belliella baltica DSM 15883   36 35
No Yes Cyclobacterium marinum DSM 745   54 46
No Yes Marivirga tractuosa DSM 4126   35 32
No Yes Fibrella aestuarina   86 73
No Yes Leadbetterella byssophila DSM 17132   68 59
No Yes Dyadobacter fermentans DSM 18053   137 113
No Yes Cytophaga hutchinsonii ATCC 33406   38 33
No Yes Spirosoma linguale DSM 74   148 134
No Yes Runella slithyformis DSM 19594   117 96
No Yes Parabacteroides distasonis ATCC 8503   68 59
No Yes Tannerella forsythia ATCC 43037   17 17
No Yes Paludibacter propionicigenes WB4   27 24
No Yes Odoribacter splanchnicus DSM 20712   32 30
No Yes Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2   2 2
No Yes Bacteroides sp. CF50   19 17
No Yes Prevotella melaninogenica ATCC 25845   13 13
No Yes Prevotella intermedia 17   19 19
No Yes Prevotella denticola F0289   20 19
No Yes Prevotella ruminicola 23   33 30
No Yes Porphyromonas asaccharolytica DSM 20707   15 15
No Yes Porphyromonas gingivalis ATCC 33277   10 10
No Yes Alistipes finegoldii DSM 17242   45 41
No Yes Bacteroides salanitronis DSM 18170   73 66
No Yes Bacteroides helcogenes P 36-108   70 60
No Yes Bacteroides vulgatus ATCC 8482   73 69
No Yes Bacteroides thetaiotaomicron VPI-5482   122 109
No Yes Bacteroides fragilis YCH46   70 62
No Yes Pedobacter saltans DSM 12145   50 42
No Yes Solitalea canadensis DSM 3403   69 59
No Yes Pedobacter heparinus DSM 2366   86 66
No Yes Sphingobacterium sp. 21   157 133
No Yes Fluviicola taffensis DSM 16823   30 29
No Yes Owenweeksia hongkongensis DSM 17368   39 34
No Yes Zunongwangia profunda SM-A87   98 85
No Yes Krokinobacter sp. 4H-3-7-5   19 17
No Yes Gramella forsetii KT0803   29 28
No Yes Lacinutrix sp. 5H-3-7-4   36 32
No Yes Maribacter sp. HTCC2170   40 29
No Yes Robiginitalea biformata HTCC2501   34 31
No Yes Croceibacter atlanticus HTCC2559   14 14
No Yes Aequorivita sublithincola DSM 14238   22 20
No Yes Zobellia galactanivorans   91 73
No Yes Muricauda ruestringensis DSM 13258   47 40
No Yes Cellulophaga algicola DSM 14237   59 54
No Yes Cellulophaga lytica DSM 7489   52 44
No Yes Flavobacteriaceae bacterium 3519-10   14 14
No Yes Polaribacter sp. MED152   18 17
No Yes Riemerella anatipestifer ATCC 11845 = DSM 15868   5 5
No Yes Ornithobacterium rhinotracheale DSM 15997   22 22
No Yes Capnocytophaga canimorsus Cc5   16 14
No Yes Capnocytophaga ochracea DSM 7271   17 15
No Yes Weeksella virosa DSM 16922   13 11
No Yes Flavobacterium indicum GPTSA100-9   22 19
No Yes Flavobacterium psychrophilum JIP02/86   30 25
No Yes Flavobacterium branchiophilum FL-15   21 19
No Yes Flavobacterium columnare ATCC 49512   27 24
No Yes Flavobacterium johnsoniae UW101   99 87
No Yes Blattabacterium sp. (Nauphoeta cinerea)   1 1
No Yes Blattabacterium sp. (Blattella germanica) str. Bge   1 1
No Yes Fibrobacter succinogenes subsp. succinogenes S85   11 10
No Yes Waddlia chondrophila WSU 86-1044   13 13
No Yes Candidatus Protochlamydia amoebophila UWE25   12 12
No Yes Parachlamydia acanthamoebae UV-7   4 4
No Yes Simkania negevensis Z   7 7
No Yes Phycisphaera mikurensis NBRC 102666   34 26
No Yes Isosphaera pallida ATCC 43644   16 16
No Yes Planctomyces brasiliensis DSM 5305   45 35
No Yes Planctomyces limnophilus DSM 3776   27 23
No Yes Rhodopirellula baltica SH 1   64 53
No Yes Pirellula staleyi DSM 6068   29 26
No Yes Methylacidiphilum infernorum V4   9 8
No Yes Coraliomargarita akajimensis DSM 45221   84 52
No Yes Opitutus terrae PB90-1   56 45
No Yes Akkermansia muciniphila ATCC BAA-835   6 6
No Yes Fretibacterium fastidiosum   5 5
No Yes Thermovirga lienii DSM 17291   26 26
No Yes Aminobacterium colombiense DSM 12261   8 8
No Yes Thermanaerovibrio acidaminovorans DSM 6589   3 3
No Yes Anaerobaculum mobile DSM 13181   3 3
No Yes Turneriella parva DSM 21527   61 60
No Yes Leptospira borgpetersenii serovar Hardjo-bovis str. L550   24 23
No Yes Leptospira interrogans serovar Lai str. IPAV   30 29
No Yes Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'   60 55
No Yes Brachyspira murdochii DSM 12563   7 7
No Yes Brachyspira intermedia PWS/A   10 10
No Yes Brachyspira pilosicoli 95/1000   7 7
No Yes Brachyspira hyodysenteriae WA1   10 10
No Yes Borrelia garinii PBi   1 1
No Yes Borrelia bissettii DN127   1 1
No Yes Borrelia afzelii PKo   1 1
No Yes Borrelia burgdorferi B31   1 1
No Yes Borrelia recurrentis A1   1 1
No Yes Borrelia duttonii Ly   1 1
No Yes Borrelia crocidurae str. Achema   1 1
No Yes Borrelia turicatae 91E135   1 1
No Yes Borrelia hermsii DAH   1 1
No Yes Spirochaeta smaragdinae DSM 11293   77 65
No Yes Sphaerochaeta pleomorpha str. Grapes   85 61
No Yes Sphaerochaeta globus str. Buddy   69 50
No Yes Sphaerochaeta coccoides DSM 17374   41 27
No Yes Spirochaeta caldaria DSM 7334   42 34
No Yes Treponema azotonutricium ZAS-9   46 32
No Yes Treponema primitia ZAS-2   32 26
No Yes Treponema brennaborense DSM 12168   49 34
No Yes Treponema paraluiscuniculi Cuniculi A   1 1
No Yes Treponema succinifaciens DSM 2489   30 23
No Yes Treponema pallidum subsp. pallidum SS14   2 2
No Yes Treponema denticola ATCC 35405   24 22
No Yes Spirochaeta africana DSM 8902   29 24
No Yes Spirochaeta thermophila DSM 6192   35 26
No Yes Thermodesulfatator indicus DSM 15286   18 18
No Yes Thermodesulfobacterium sp. OPB45   11 11
No Yes Desulfurispirillum indicum S5   24 23
No Yes Calditerrivibrio nitroreducens DSM 19672   13 13
No Yes Denitrovibrio acetiphilus DSM 12809   61 54
No Yes Deferribacter desulfuricans SSM1   13 13
No Yes Flexistipes sinusarabici DSM 4947   13 13
No Yes Marinitoga piezophila KA3   13 12
No Yes Petrotoga mobilis SJ95   10 9
No Yes Mesotoga prima MesG1.Ag.4.2   12 11
No Yes Kosmotoga olearia TBF 19.5.1   21 21
No Yes Fervidobacterium pennivorans DSM 9078   7 6
No Yes Fervidobacterium nodosum Rt17-B1   5 4
No Yes Thermosipho melanesiensis BI429   5 5
No Yes Thermosipho africanus TCF52B   30 30
No Yes Thermotoga lettingae TMO   10 9
No Yes Thermotoga thermarum DSM 5069   12 11
No Yes Thermotoga sp. RQ2   7 6
No Yes Thermotoga naphthophila RKU-10   5 5
No Yes Thermotoga petrophila RKU-1   7 6
No Yes Thermotoga neapolitana DSM 4359   7 6
No Yes Thermotoga maritima MSB8   7 6
No Yes Thermovibrio ammonificans HB-1   7 7
No Yes Desulfurobacterium thermolithotrophum DSM 11699   22 22
No Yes Sulfurihydrogenibium sp. YO3AOP1   12 12
No Yes Sulfurihydrogenibium azorense Az-Fu1   21 21
No Yes Persephonella marina EX-H1   17 17
No Yes Hydrogenobaculum sp. SN   8 8
No Yes Hydrogenobaculum sp. HO   8 8
No Yes Hydrogenobaculum sp. Y04AAS1   7 7
No Yes Thermocrinis albus DSM 14484   8 8
No Yes Aquifex aeolicus VF5   11 11
No Yes Hydrogenobacter thermophilus TK-6   11 11
No Yes Elusimicrobium minutum Pei191   4 3
No Yes Dictyoglomus turgidum DSM 6724   6 5
No Yes Dictyoglomus thermophilum H-6-12   8 6
No Yes Caldisericum exile AZM16c01   3 3
No Yes Candidatus Chloracidobacterium thermophilum B   16 16
No Yes Candidatus Solibacter usitatus Ellin6076   105 97
No Yes Granulicella tundricola MP5ACTX9   76 66
No Yes Granulicella mallensis MP5ACTX8   102 78
No Yes Candidatus Koribacter versatilis Ellin345   43 42
No Yes Terriglobus saanensis SP1PR4   83 64
No Yes Terriglobus roseus DSM 18391   40 34
No Yes Acidobacterium capsulatum ATCC 51196   42 40
No Yes Thermodesulfovibrio yellowstonii DSM 11347   16 16
No Yes Candidatus Nitrospira defluvii   46 42
No Yes Leptospirillum ferrooxidans C2-3   29 28
No Yes Streptobacillus moniliformis DSM 12112   7 6
No Yes Sebaldella termitidis ATCC 33386   53 46
No Yes Leptotrichia buccalis C-1013-b   13 10
No Yes Ilyobacter polytropus DSM 2926   29 26
No Yes Fusobacterium nucleatum subsp. nucleatum ATCC 25586   18 17
No Yes Candidatus Methylomirabilis oxyfera   29 29
No Yes Candidatus Saccharimonas aalborgensis   1 1
No Yes Acidithiobacillus ferrivorans SS3   25 25
No Yes Acidithiobacillus caldus SM-1   35 35
No Yes Acidithiobacillus ferrooxidans ATCC 53993   23 22
No Yes Bacteriovorax marinus SJ   15 15
No Yes Bdellovibrio bacteriovorus HD100   25 25
No Yes Nautilia profundicola AmH   6 5
No Yes Nitratifractor salsuginis DSM 16511   15 12
No Yes Sulfurospirillum deleyianum DSM 6946   11 8
No Yes Sulfurospirillum barnesii SES-3   21 14
No Yes Arcobacter sp. L   38 30
No Yes Arcobacter nitrofigilis DSM 7299   46 33
No Yes Arcobacter butzleri RM4018   21 16
No Yes Campylobacter hominis ATCC BAA-381   2 2
No Yes Campylobacter lari RM2100   3 3
No Yes Campylobacter curvus 525.92   7 5
No Yes Campylobacter concisus 13826   1 1
No Yes Campylobacter jejuni subsp. doylei 269.97   2 2
No Yes Campylobacter sp. 03-427   6 4
No Yes Campylobacter fetus subsp. fetus 82-40   6 5
No Yes uncultured Sulfuricurvum sp. RIFRC-1   11 11
No Yes Sulfuricurvum kujiense DSM 16994   17 16
No Yes Sulfurimonas autotrophica DSM 16294   5 5
No Yes Sulfurimonas denitrificans DSM 1251   7 6
No Yes Wolinella succinogenes DSM 1740   31 27
No Yes Helicobacter hepaticus ATCC 51449   3 3
No Yes Helicobacter mustelae 12198   1 1
No Yes Helicobacter cinaedi PAGU611   2 2
No Yes Helicobacter acinonychis str. Sheeba   1 1
No Yes Nitratiruptor sp. SB155-2   10 10
No Yes Sulfurovum sp. NBC37-1   15 13
No Yes Desulfarculus baarsii DSM 2075   71 65
No Yes Desulfobacca acetoxidans DSM 11109   27 26
No Yes Syntrophus aciditrophicus SB   27 27
No Yes Desulfomonile tiedjei DSM 6799   97 91
No Yes Syntrophobacter fumaroxidans MPOB   45 44
No Yes Desulfurivibrio alkaliphilus AHT2   30 30
No Yes Desulfotalea psychrophila LSv54   31 29
No Yes Desulfobulbus propionicus DSM 2032   44 43
No Yes Desulfatibacillum alkenivorans AK-01   131 119
No Yes Desulfobacterium autotrophicum HRM2   79 79
No Yes Desulfococcus oleovorans Hxd3   58 56
No Yes Desulfohalobium retbaense DSM 5692   30 29
No Yes Desulfomicrobium baculatum DSM 4028   58 57
No Yes Desulfovibrio piezophilus   52 46
No Yes Desulfovibrio aespoeensis Aspo-2   63 57
No Yes Lawsonia intracellularis PHE/MN1-00   7 7
No Yes Desulfovibrio magneticus RS-1   63 56
No Yes Desulfovibrio alaskensis G20   70 67
No Yes Desulfovibrio vulgaris subsp. vulgaris DP4   49 46
No Yes Desulfovibrio salexigens DSM 2638   72 61
No Yes Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774   29 26
No Yes Desulfovibrio africanus str. Walvis Bay   54 50
No Yes Hippea maritima DSM 10411   13 13
No Yes Geobacter daltonii FRC-32   54 50
No Yes Geobacter sp. M21   49 46
No Yes Geobacter uraniireducens Rf4   82 76
No Yes Geobacter lovleyi SZ   57 55
No Yes Geobacter bemidjiensis Bem   53 49
No Yes Geobacter sulfurreducens KN400   45 45
No Yes Geobacter metallireducens GS-15   48 47
No Yes Pelobacter propionicus DSM 2379   45 42
No Yes Pelobacter carbinolicus DSM 2380   47 44
No Yes Haliangium ochraceum DSM 14365   96 89
No Yes Sorangium cellulosum 'So ce 56'   178 159
No Yes Anaeromyxobacter sp. Fw109-5   67 62
No Yes Anaeromyxobacter dehalogenans 2CP-1   68 65
No Yes Stigmatella aurantiaca DW4/3-1   104 95
No Yes Corallococcus coralloides DSM 2259   135 118
No Yes Myxococcus xanthus DK 1622   116 110
No Yes Myxococcus fulvus HW-1   112 106
No Yes Dechloromonas aromatica RCB   45 43
No Yes Thauera sp. MZ1T   40 39
No Yes Azoarcus sp. KH32C   89 78
No Yes Azoarcus sp. BH72   62 53
No Yes Aromatoleum aromaticum EbN1   44 43
No Yes Dechlorosoma suillum PS   36 34
No Yes Pseudogulbenkiania sp. NH8B   60 48
No Yes Laribacter hongkongensis HLHK9   35 30
No Yes Chromobacterium violaceum ATCC 12472   69 56
No Yes Neisseria meningitidis alpha14   13 11
No Yes Neisseria meningitidis FAM18   21 19
No Yes Neisseria lactamica 020-06   19 18
No Yes Neisseria gonorrhoeae NCCP11945   11 9
No Yes Candidatus Accumulibacter phosphatis clade IIA str. UW-1   60 57
No Yes beta proteobacterium CB   9 8
No Yes Methylibium petroleiphilum PM1   60 57
No Yes Thiomonas arsenitoxydans   31 28
No Yes Thiomonas intermedia K12   43 40
No Yes Rubrivivax gelatinosus IL144   66 60
No Yes Leptothrix cholodnii SP-6   65 59
No Yes Burkholderia rhizoxinica HKI 454   58 53
No Yes Burkholderia phytofirmans PsJN   194 141
No Yes Burkholderia phymatum STM815   210 164
No Yes Burkholderia xenovorans LB400   259 205
No Yes Ralstonia eutropha JMP134   143 122
No Yes Cupriavidus taiwanensis LMG 19424   115 102
No Yes Cupriavidus metallidurans CH34   129 116
No Yes Cupriavidus necator N-1   173 154
No Yes Ralstonia eutropha H16   137 118
No Yes Ralstonia pickettii 12D   94 77
No Yes Ralstonia solanacearum CFBP2957   79 69
No Yes Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1   7 7
No Yes Burkholderia sp. RPE64   142 109
No Yes Burkholderia sp. CCGE1002   182 136
No Yes Burkholderia thailandensis E264   144 114
No Yes Burkholderia pseudomallei 1106a   137 108
No Yes Burkholderia mallei SAVP1   167 149
No Yes Burkholderia ambifaria AMMD   193 152
No Yes Burkholderia cenocepacia HI2424   239 186
No Yes Burkholderia multivorans ATCC 17616   168 133
No Yes Burkholderia vietnamiensis G4   205 163
No Yes Burkholderia gladioli BSR3   227 177
No Yes Burkholderia glumae BGR1   170 145
No Yes Verminephrobacter eiseniae EF01-2   87 78
No Yes Alicycliphilus denitrificans K601   77 76
No Yes Ramlibacter tataouinensis TTB310   48 37
No Yes Delftia sp. Cs1-4   126 105
No Yes Delftia acidovorans SPH-1   124 108
No Yes Polaromonas sp. JS666   80 74
No Yes Polaromonas naphthalenivorans CJ2   78 76
No Yes Variovorax paradoxus S110   140 112
No Yes Rhodoferax ferrireducens T118   55 51
No Yes Acidovorax ebreus TPSY   41 40
No Yes Acidovorax sp. KKS102   79 68
No Yes Acidovorax sp. JS42   66 64
No Yes Acidovorax citrulli AAC00-1   92 90
No Yes Acidovorax avenae subsp. avenae ATCC 19860   77 67
No Yes Comamonas testosteroni CNB-2   74 67
No Yes Herminiimonas arsenicoxydans   31 29
No Yes Collimonas fungivorans Ter331   84 69
No Yes Janthinobacterium sp. Marseille   71 53
No Yes Herbaspirillum seropedicae SmR1   102 79
No Yes Pusillimonas sp. T7-7   37 35
No Yes Advenella kashmirensis WT001   52 44
No Yes Taylorella asinigenitalis MCE3   4 4
No Yes Taylorella equigenitalis MCE9   4 4
No Yes Bordetella petrii DSM 12804   161 139
No Yes Bordetella avium 197N   29 24
No Yes Bordetella pertussis Tohama I   257 250
No Yes Bordetella parapertussis 12822   62 53
No Yes Bordetella bronchiseptica RB50   69 58
No Yes Achromobacter xylosoxidans A8   140 112
No Yes Achromobacter xylosoxidans   143 113
No Yes Thiobacillus denitrificans ATCC 25259   18 18
No Yes Nitrosospira multiformis ATCC 25196   37 37
No Yes Nitrosomonas sp. Is79A3   53 53
No Yes Nitrosomonas eutropha C91   51 50
No Yes Nitrosomonas europaea ATCC 19718   53 53
No Yes Sideroxydans lithotrophicus ES-1   16 16
No Yes Gallionella capsiferriformans ES-2   16 16
No Yes Methylotenera versatilis 301   25 23
No Yes Methylotenera mobilis JLW8   26 24
No Yes Methylovorus sp. MP688   36 31
No Yes Methylovorus glucosetrophus SIP3-4   41 35
No Yes Methylobacillus flagellatus KT   33 32
No Yes Magnetococcus marinus MC-1   28 27
No Yes Parvularcula bermudensis HTCC2503   14 13
No Yes Asticcacaulis excentricus CB 48   37 36
No Yes Brevundimonas subvibrioides ATCC 15264   28 26
No Yes Caulobacter sp. K31   150 134
No Yes Caulobacter crescentus NA1000   59 55
No Yes Caulobacter segnis ATCC 21756   83 67
No Yes Phenylobacterium zucineum HLK1   51 43
No Yes Erythrobacter litoralis HTCC2594   22 22
No Yes Sphingopyxis alaskensis RB2256   35 35
No Yes Novosphingobium sp. PP1Y   70 65
No Yes Novosphingobium aromaticivorans DSM 12444   60 56
No Yes Sphingobium sp. SYK-6   57 53
No Yes Sphingobium japonicum UT26S   64 59
No Yes Sphingobium chlorophenolicum L-1   79 73
No Yes Sphingomonas sp. MM-1   107 92
No Yes Sphingomonas wittichii RW1   126 104
No Yes Zymomonas mobilis subsp. mobilis NCIMB 11163   14 14
No Yes Maricaulis maris MCS10   39 33
No Yes Hirschia baltica ATCC 49814   25 24
No Yes Hyphomonas neptunium ATCC 15444   59 54
No Yes Dinoroseobacter shibae DFL 12   69 62
No Yes Phaeobacter gallaeciensis 2.10   68 56
No Yes Pseudovibrio sp. FO-BEG1   143 119
No Yes Jannaschia sp. CCS1   62 53
No Yes Ruegeria sp. TM1040   62 53
No Yes Ruegeria pomeroyi DSS-3   74 60
No Yes Ketogulonicigenium vulgare Y25   31 28
No Yes Ketogulonigenium vulgarum WSH-001   30 27
No Yes Roseobacter litoralis Och 149   70 61
No Yes Roseobacter denitrificans OCh 114   47 40
No Yes Rhodobacter sphaeroides ATCC 17029   49 44
No Yes Rhodobacter capsulatus SB 1003   52 45
No Yes Paracoccus denitrificans PD1222   88 70
No Yes Rhodospirillum photometricum DSM 122   29 26
No Yes Tistrella mobilis KA081020-065   178 147
No Yes Magnetospirillum magneticum AMB-1   36 34
No Yes Rhodospirillum centenum SW   37 36
No Yes Rhodospirillum rubrum F11   61 52
No Yes Azospirillum lipoferum 4B   101 89
No Yes Azospirillum sp. B510   134 120
No Yes Azospirillum brasilense Sp245   68 61
No Yes Gluconacetobacter xylinus NBRC 3288   47 43
No Yes Granulibacter bethesdensis CGDNIH1   22 19
No Yes Gluconacetobacter diazotrophicus PAl 5   82 78
No Yes Acidiphilium multivorum AIU301   61 53
No Yes Acidiphilium cryptum JF-5   47 40
No Yes Gluconobacter oxydans 621H   44 44
No Yes Acetobacter pasteurianus IFO 3283-01   67 65
No Yes Polymorphum gilvum SL003B-26A1   82 80
No Yes Micavibrio aeruginosavorus ARL-13   11 11
No Yes Candidatus Puniceispirillum marinum IMCC1322   18 14
No Yes alpha proteobacterium HIMB5   1 1
No Yes alpha proteobacterium HIMB59   1 1
No Yes Candidatus Pelagibacter sp. IMCC9063   2 2
No Yes Candidatus Midichloria mitochondrii IricVA   2 2
No Yes Neorickettsia sennetsu str. Miyayama   1 1
No Yes Neorickettsia risticii str. Illinois   1 1
No Yes Wolbachia endosymbiont of Culex quinquefasciatus Pel   4 4
No Yes Wolbachia sp. wRi   5 5
No Yes Ehrlichia chaffeensis str. Arkansas   1 1
No Yes Ehrlichia canis str. Jake   1 1
No Yes Ehrlichia ruminantium str. Gardel   1 1
No Yes Anaplasma phagocytophilum HZ   1 1
No Yes Anaplasma marginale str. Florida   1 1
No Yes Anaplasma centrale str. Israel   1 1
No Yes Orientia tsutsugamushi str. Boryong   3 3
No Yes Rickettsia bellii OSU 85-389   1 1
No Yes Rickettsia canadensis str. McKiel   1 1
No Yes Rickettsia typhi str. Wilmington   1 1
No Yes Rickettsia prowazekii str. BuV67-CWPP   1 1
No Yes Rickettsia philipii str. 364D   1 1
No Yes Rickettsia heilongjiangensis 054   1 1
No Yes Rickettsia peacockii str. Rustic   1 1
No Yes Rickettsia felis URRWXCal2   4 4
No Yes Rickettsia slovaca 13-B   1 1
No Yes Rickettsia parkeri str. Portsmouth   1 1
No Yes Rickettsia massiliae MTU5   5 5
No Yes Rickettsia japonica YH   1 1
No Yes Rickettsia africae ESF-5   2 2
No Yes Rickettsia rhipicephali str. 3-7-female6-CWPP   3 3
No Yes Rickettsia montanensis str. OSU 85-930   1 1
No Yes Candidatus Rickettsia amblyommii str. GAT-30V   4 4
No Yes Rickettsia australis str. Cutlack   3 3
No Yes Rickettsia akari str. Hartford   1 1
No Yes Rickettsia rickettsii str. 'Sheila Smith'   1 1
No Yes Rickettsia conorii str. Malish 7   1 1
No Yes Starkeya novella DSM 506   74 55
No Yes Xanthobacter autotrophicus Py2   77 72
No Yes Azorhizobium caulinodans ORS 571   80 67
No Yes Methylobacterium chloromethanicum CM4   73 64
No Yes Methylobacterium extorquens AM1   53 45
No Yes Methylobacterium sp. 4-46   100 91
No Yes Methylobacterium populi BJ001   54 49
No Yes Methylobacterium nodulans ORS 2060   121 110
No Yes Methylobacterium radiotolerans JCM 2831   96 83
No Yes Parvibaculum lavamentivorans DS-1   66 60
No Yes Ochrobactrum anthropi ATCC 49188   95 86
No Yes Brucella microti CCM 4915   33 30
No Yes Brucella pinnipedialis B2/94   39 36
No Yes Brucella canis ATCC 23365   33 30
No Yes Brucella suis ATCC 23445   32 29
No Yes Brucella melitensis ATCC 23457   29 26
No Yes Brucella ovis ATCC 25840   29 27
No Yes Brucella abortus S19   31 28
No Yes Sinorhizobium fredii NGR234   145 116
No Yes Sinorhizobium medicae WSM419   129 104
No Yes Sinorhizobium meliloti AK83   140 113
No Yes Genome sequence of Rhizobium sp. strain IRBG74   110 88
No Yes Rhizobium etli CIAT 652   107 85
No Yes Rhizobium leguminosarum bv. viciae 3841   167 124
No Yes Agrobacterium tumefaciens str. C58   105 87
No Yes Agrobacterium radiobacter K84   168 132
No Yes Agrobacterium sp. H13-3   116 90
No Yes Agrobacterium vitis S4   97 82
No Yes Candidatus Liberibacter asiaticus str. psy62   1 1
No Yes Mesorhizobium sp. BNC1   45 36
No Yes Mesorhizobium opportunistum WSM2075   118 96
No Yes Mesorhizobium ciceri biovar biserrulae WSM1271   112 93
No Yes Mesorhizobium loti MAFF303099   145 118
No Yes Methylocella silvestris BL2   60 54
No Yes Beijerinckia indica subsp. indica ATCC 9039   77 66
No Yes Pelagibacterium halotolerans B2   62 55
No Yes Rhodomicrobium vannielii ATCC 17100   45 45
No Yes Hyphomicrobium sp. MC1   64 56
No Yes Hyphomicrobium denitrificans ATCC 51888   23 21
No Yes Oligotropha carboxidovorans OM4   25 24
No Yes Rhodopseudomonas palustris BisA53   49 44
No Yes Nitrobacter winogradskyi Nb-255   42 42
No Yes Nitrobacter hamburgensis X14   60 60
No Yes Bradyrhizobium japonicum USDA 110   171 146
No Yes Bradyrhizobium sp. ORS 278   100 87
No Yes Methylocystis sp. SC2   25 23
No Yes Bartonella tribocorum CIP 105476   10 6
No Yes Bartonella clarridgeiae 73   2 2
No Yes Bartonella henselae str. Houston-1   2 2
No Yes Bartonella grahamii as4aup   2 2
No Yes Bartonella quintana str. Toulouse   2 2
No Yes Bartonella bacilliformis KC583   2 2
No Yes Saccharophagus degradans 2-40   61 55
No Yes Teredinibacter turnerae T7901   57 51
No Yes Cellvibrio japonicus Ueda107   41 40
No Yes Aggregatibacter aphrophilus NJ8700   14 12
No Yes Aggregatibacter actinomycetemcomitans D7S-1   17 15
No Yes Haemophilus somnus 129PT   10 9
No Yes Gallibacterium anatis UMN179   41 34
No Yes Pasteurella multocida subsp. multocida str. 3480   11 11
No Yes Haemophilus parasuis SH0165   13 12
No Yes Haemophilus ducreyi 35000HP   9 9
No Yes Haemophilus parainfluenzae T3T1   16 14
No Yes Haemophilus influenzae PittEE   12 11
No Yes Actinobacillus succinogenes 130Z   16 13
No Yes Actinobacillus pleuropneumoniae serovar 5b str. L20   25 19
No Yes Oceanimonas sp. GK1   55 52
No Yes Tolumonas auensis DSM 9187   58 47
No Yes Aeromonas veronii B565   58 49
No Yes Aeromonas salmonicida subsp. salmonicida A449   114 103
No Yes Aeromonas hydrophila subsp. hydrophila ATCC 7966   69 56
No Yes Aliivibrio salmonicida LFI1238   77 70
No Yes Vibrio fischeri MJ11   59 51
No Yes Vibrio sp. Ex25   88 70
No Yes Vibrio harveyi ATCC BAA-1116   160 149
No Yes Vibrio parahaemolyticus RIMD 2210633   86 71
No Yes Vibrio splendidus LGP32   92 77
No Yes Vibrio anguillarum 775   55 47
No Yes Vibrio furnissii NCTC 11218   117 87
No Yes Vibrio vulnificus MO6-24/O   83 67
No Yes Vibrio cholerae O395   68 59
No Yes Photobacterium profundum SS9   146 117
No Yes Psychromonas ingrahamii 37   36 36
No Yes Psychromonas sp. CNPT3   25 23
No Yes Idiomarina loihiensis L2TR   26 26
No Yes Ferrimonas balearica DSM 9799   52 49
No Yes Shewanella piezotolerans WP3   77 69
No Yes Shewanella loihica PV-4   61 52
No Yes Shewanella halifaxensis HAW-EB4   64 57
No Yes Shewanella sediminis HAW-EB3   76 73
No Yes Shewanella denitrificans OS217   59 54
No Yes Shewanella pealeana ATCC 700345   75 71
No Yes Shewanella oneidensis MR-1   106 102
No Yes Shewanella baltica OS185   75 69
No Yes Shewanella woodyi ATCC 51908   84 74
No Yes Shewanella sp. MR-4   61 56
No Yes Shewanella amazonensis SB2B   50 44
No Yes Shewanella violacea DSS12   58 52
No Yes Shewanella frigidimarina NCIMB 400   71 69
No Yes Shewanella putrefaciens CN-32   58 54
No Yes Colwellia psychrerythraea 34H   95 84
No Yes Pseudoalteromonas sp. SM9913   47 41
No Yes Pseudoalteromonas atlantica T6c   73 58
No Yes Pseudoalteromonas haloplanktis TAC125   40 33
No Yes Glaciecola sp. 4H-3-7+YE-5   79 65
No Yes Glaciecola nitratireducens FR1064   34 31
No Yes Marinobacter adhaerens HP15   72 66
No Yes Marinobacter sp. BSs20148   44 39
No Yes Marinobacter hydrocarbonoclasticus ATCC 49840   74 67
No Yes Marinobacter aquaeolei VT8   90 84
No Yes Alteromonas sp. SN2   56 51
No Yes Alteromonas macleodii str. 'Deep ecotype'   40 37
No Yes Kangiella koreensis DSM 16069   18 17
No Yes Hahella chejuensis KCTC 2396   136 111
No Yes Alcanivorax borkumensis SK2   49 48
No Yes Marinomonas posidonica IVIA-Po-181   80 61
No Yes Marinomonas sp. MWYL1   130 104
No Yes Marinomonas mediterranea MMB-1   89 69
No Yes Chromohalobacter salexigens DSM 3043   62 45
No Yes Halomonas elongata DSM 2581   76 58
No Yes Methylomicrobium alcaliphilum   32 31
No Yes Methylomonas methanica MC09   93 92
No Yes Methylococcus capsulatus str. Bath   30 29
No Yes Dichelobacter nodosus VCS1703A   4 4
No Yes Rhodanobacter denitrificans   34 29
No Yes Frateuria aurantia DSM 6220   42 36
No Yes Pseudoxanthomonas spadix BD-a59   26 26
No Yes Pseudoxanthomonas suwonensis 11-1   25 21
No Yes Stenotrophomonas maltophilia K279a   92 74
No Yes Xylella fastidiosa M23   7 6
No Yes Xanthomonas axonopodis pv. citri str. 306   85 77
No Yes Xanthomonas albilineans GPE PC73   39 38
No Yes Xanthomonas oryzae pv. oryzae PXO99A   111 109
No Yes Xanthomonas campestris pv. campestris str. B100   79 72
No Yes Halothiobacillus neapolitanus c2   21 20
No Yes Spiribacter sp. UAH-SP71   12 12
No Yes Alkalilimnicola ehrlichii MLHE-1   33 33
No Yes Thioalkalivibrio sulfidophilus HL-EbGr7   31 29
No Yes Thioalkalivibrio sp. K90mix   31 29
No Yes Halorhodospira halophila SL1   24 24
No Yes Allochromatium vinosum DSM 180   17 17
No Yes Thiocystis violascens DSM 198   104 104
No Yes Nitrosococcus watsonii C-113   24 24
No Yes Nitrosococcus halophilus Nc4   34 33
No Yes Nitrosococcus oceani ATCC 19707   32 32
No Yes Coxiella burnetii Dugway 5J108-111   4 3
No Yes Legionella longbeachae NSW150   17 15
No Yes Legionella pneumophila str. Corby   16 15
No Yes gamma proteobacterium HdN1   66 63
No Yes Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)   2 2
No Yes Candidatus Vesicomyosocius okutanii HA   1 1
No Yes Photorhabdus asymbiotica   54 47
No Yes Photorhabdus luminescens subsp. laumondii TTO1   104 95
No Yes Xenorhabdus bovienii SS-2004   85 76
No Yes Xenorhabdus nematophila ATCC 19061   116 111
No Yes Providencia stuartii MRSN 2154   69 57
No Yes Proteus mirabilis HI4320   56 48
No Yes Edwardsiella ictaluri 93-146   50 43
No Yes Edwardsiella tarda EIB202   59 50
No Yes Rahnella sp. Y9602   115 87
No Yes Rahnella aquatilis CIP 78.65 = ATCC 33071   112 91
No Yes Yersinia pseudotuberculosis IP 31758   50 41
No Yes Yersinia pestis Pestoides F   85 76
No Yes Yersinia enterocolitica subsp. enterocolitica 8081   72 59
No Yes Serratia sp. AS12   128 99
No Yes Serratia symbiotica str. 'Cinara cedri'   1 1
No Yes Serratia sp. ATCC 39006   83 72
No Yes Serratia plymuthica AS9   128 99
No Yes Serratia proteamaculans 568   110 88
No Yes Dickeya dadantii Ech703   81 66
No Yes Dickeya zeae Ech1591   83 67
No Yes Pectobacterium wasabiae WPP163   77 59
No Yes Pectobacterium sp. SCC3193   82 66
No Yes Pectobacterium atrosepticum SCRI1043   78 61
No Yes Pectobacterium carotovorum subsp. carotovorum PC1   76 60
No Yes Sodalis glossinidius str. 'morsitans'   28 24
No Yes Pantoea sp. At-9b   150 116
No Yes Pantoea vagans C9-1   94 75
No Yes Pantoea ananatis LMG 20103   79 64
No Yes Buchnera aphidicola BCc   1 1
No Yes Erwinia tasmaniensis Et1/99   45 39
No Yes Erwinia sp. Ejp617   68 62
No Yes Erwinia billingiae Eb661   103 80
No Yes Erwinia pyrifoliae Ep1/96   78 72
No Yes Erwinia amylovora ATCC 49946   43 37
No Yes Escherichia blattae DSM 4481   90 77
No Yes Candidatus Moranella endobia PCIT   1 1
No Yes Cronobacter turicensis z3032   74 56
No Yes Cronobacter sakazakii ES15   72 55
No Yes Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)   40 40
No Yes Enterobacteriaceae bacterium strain FGI 57   86 67
No Yes Shigella sonnei Ss046   181 172
No Yes Shigella flexneri 5 str. 8401   165 155
No Yes Shigella dysenteriae Sd197   307 296
No Yes Shigella boydii CDC 3083-94   150 139
No Yes Salmonella bongori NCTC 12419   67 55
No Yes Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594   78 63
No Yes Klebsiella oxytoca E718   152 121
No Yes Klebsiella variicola At-22   133 103
No Yes Klebsiella pneumoniae NTUH-K2044   131 107
No Yes Enterobacter aerogenes KCTC 2190   110 83
No Yes Escherichia fergusonii ATCC 35469   75 64
No Yes Escherichia coli 'BL21-Gold(DE3)pLysS AG'   86 72
No Yes Enterobacter sp. R4-368   108 82
No Yes Enterobacter sp. 638   88 67
No Yes Enterobacter asburiae LF7a   94 72
No Yes Enterobacter cloacae subsp. dissolvens SDM   98 75
No Yes Citrobacter rodentium ICC168   105 90
No Yes Citrobacter koseri ATCC BAA-895   85 67
No Yes Azotobacter vinelandii DJ   104 93
No Yes Pseudomonas sp. TKP   177 139
No Yes Pseudomonas sp. UW4   155 121
No Yes Pseudomonas brassicacearum subsp. brassicacearum NFM421   171 131
No Yes Pseudomonas entomophila L48   112 91
No Yes Pseudomonas syringae pv. tomato str. DC3000   132 116
No Yes Pseudomonas stutzeri A1501   82 70
No Yes Pseudomonas fulva 12-X   109 82
No Yes Pseudomonas putida F1   124 99
No Yes Pseudomonas protegens Pf-5   159 134
No Yes Pseudomonas fluorescens SBW25   169 133
No Yes Pseudomonas mendocina ymp   119 93
No Yes Pseudomonas aeruginosa UCBPP-PA14   168 137
No Yes Pseudomonas sp. VLB120   113 91
No Yes Psychrobacter sp. G   31 25
No Yes Psychrobacter sp. PRwf-1   46 44
No Yes Psychrobacter arcticus 273-4   28 28
No Yes Psychrobacter cryohalolentis K5   35 29
No Yes Moraxella catarrhalis RH4   3 3
No Yes Acinetobacter oleivorans DR1   124 110
No Yes Acinetobacter calcoaceticus PHEA-2   89 80
No Yes Acinetobacter baumannii ATCC 17978   75 61
No Yes Acinetobacter sp. ADP1   71 59
No Yes Methylophaga sp. JAM1   33 28
No Yes Cycloclasticus sp. P1   13 13
No Yes Thiomicrospira crunogena XCL-2   17 16
No Yes Thioalkalimicrobium cyclicum ALM1   8 8
No Yes Francisella sp. TX077308   3 3
No Yes Francisella philomiragia subsp. philomiragia ATCC 25017   47 47
No Yes Francisella tularensis subsp. tularensis WY96-3418   53 53
No Yes Francisella cf. novicida 3523   2 2
No Yes Francisella novicida U112   2 2
No Yes Candidatus Korarchaeum cryptofilum OPF8   1 1
No Yes Pyrolobus fumarii 1A   4 3
No Yes Hyperthermus butylicus DSM 5456   1 1
No Yes Thermogladius cellulolyticus 1633   1 1
No Yes Ignisphaera aggregans DSM 17230   2 2
No Yes Aeropyrum pernix K1   1 1
No Yes Ignicoccus hospitalis KIN4/I   3 3
No Yes Staphylothermus hellenicus DSM 12710   1 1
No Yes Staphylothermus marinus F1   3 3
No Yes Metallosphaera cuprina Ar-4   4 3
No Yes Metallosphaera sedula DSM 5348   4 3
No Yes Acidianus hospitalis W1   2 1
No Yes Sulfolobus tokodaii str. 7   10 10
No Yes Sulfolobus islandicus Y.N.15.51   19 19
No Yes Sulfolobus solfataricus P2   28 28
No Yes Sulfolobus acidocaldarius DSM 639   2 2
No Yes Thermofilum sp. 1910b   1 1
No Yes Vulcanisaeta moutnovskia 768-28   1 1
No Yes Caldivirga maquilingensis IC-167   1 1
No Yes Pyrobaculum sp. 1860   1 1
No Yes Pyrobaculum oguniense TE7   2 2
No Yes Thermoproteus neutrophilus V24Sta   1 1
No Yes Thermoproteus uzoniensis 768-20   1 1
No Yes Thermoproteus tenax Kra 1   1 1
No Yes halophilic archaeon DL31   9 9
No Yes Methanocella arvoryzae MRE50   11 11
No Yes Methanocella conradii HZ254   2 2
No Yes Methanocella paludicola SANAE   12 12
No Yes Methanosaeta harundinacea 6Ac   2 2
No Yes Methanosaeta thermophila PT   1 1
No Yes Methanosaeta concilii GP6   14 14
No Yes Methanosalsum zhilinae DSM 4017   4 4
No Yes Methanohalobium evestigatum Z-7303   5 5
No Yes Methanococcoides burtonii DSM 6242   2 2
No Yes Methanosarcina acetivorans C2A   55 55
No Yes Methanosarcina mazei Go1   15 15
No Yes Methanosarcina barkeri str. Fusaro   14 14
No Yes Methanohalophilus mahii DSM 5219   3 3
No Yes Methanosphaerula palustris E1-9c   9 9
No Yes Methanoregula boonei 6A8   6 6
No Yes Methanospirillum hungatei JF-1   2 2
No Yes Methanocorpusculum labreanum Z   7 7
No Yes Methanoplanus petrolearius DSM 11571   8 8
No Yes Methanoculleus bourgensis MS2   3 3
No Yes Methanoculleus marisnigri JR1   2 2
No Yes Ferroglobus placidus DSM 10642   1 1
No Yes Archaeoglobus veneficus SNP6   14 14
No Yes Archaeoglobus fulgidus DSM 4304   10 10
No Yes Thermococcus sp. 4557   1 1
No Yes Thermococcus onnurineus NA1   2 2
No Yes Thermococcus kodakarensis KOD1   1 1
No Yes Thermococcus gammatolerans EJ3   2 2
No Yes Thermococcus sibiricus MM 739   1 1
No Yes Thermococcus barophilus MP   3 3
No Yes Pyrococcus sp. ST04   1 1
No Yes Pyrococcus yayanosii CH1   2 2
No Yes Pyrococcus horikoshii OT3   3 3
No Yes Pyrococcus abyssi GE5   2 2
No Yes Pyrococcus furiosus COM1   13 13
No Yes Thermoplasmatales archaeon BRNA1   3 3
No Yes Thermoplasma volcanium GSS1   1 1
No Yes Thermoplasma acidophilum DSM 1728   1 1
No Yes Picrophilus torridus DSM 9790   3 3
No Yes Salinarchaeum sp. Harcht-Bsk1   4 4
No Yes Halopiger xanaduensis SH-6   5 5
No Yes Haloterrigena turkmenica DSM 5511   6 6
No Yes Natrinema sp. J7-2   2 2
No Yes Natrialba magadii ATCC 43099   8 8
No Yes Halorubrum lacusprofundi ATCC 49239   5 5
No Yes Haloquadratum walsbyi DSM 16790   6 6
No Yes Halogeometricum borinquense DSM 11551   4 4
No Yes Haloferax mediterranei ATCC 33500   3 3
No Yes Haloferax volcanii DS2   9 9
No Yes Halomicrobium mukohataei DSM 12286   5 5
No Yes Halorhabdus utahensis DSM 12940   8 8
No Yes Natronomonas pharaonis DSM 2160   2 2
No Yes Haloarcula hispanica ATCC 33960   8 8
No Yes Haloarcula marismortui ATCC 43049   15 15
No Yes Halalkalicoccus jeotgali B3   5 5
No Yes Halobacterium salinarum R1   3 3
No Yes Halobacterium sp. NRC-1   3 3
No Yes Methanotorris igneus Kol 5   7 7
No Yes Methanocaldococcus fervens AG86   2 2
No Yes Methanocaldococcus jannaschii DSM 2661   2 2
No Yes Methanothermococcus okinawensis IH1   1 1
No Yes Methanococcus aeolicus Nankai-3   1 1
No Yes Methanococcus maripaludis C5   3 3
No Yes Methanococcus voltae A3   4 4
No Yes Methanococcus vannielii SB   4 4
No Yes Methanothermus fervidus DSM 2088   2 1
No Yes Methanothermobacter marburgensis str. Marburg   5 4
No Yes Methanothermobacter thermautotrophicus str. Delta H   4 3
No Yes Methanosphaera stadtmanae DSM 3091   5 4
No Yes Methanobrevibacter sp. AbM4   12 12
No Yes Methanobrevibacter ruminantium M1   6 6
No Yes Methanobrevibacter smithii ATCC 35061   7 6
No Yes Complete genome sequence of Methanobacterium sp. Mb1   12 11
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 651 560
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 354 282
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 168 143
No Yes Ascaris suum Victoria/Ghent Pig roundworm 117 105
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 209 170
No Yes Cryptococcus neoformans var. grubii H99   21 16
No Yes Cryptococcus neoformans B-3501A   20 16
No Yes Cryptococcus neoformans JEC21   18 14
No Yes Paracoccidioides brasiliensis Pb01   38 31
No Yes Paracoccidioides brasiliensis Pb03   38 31
No Yes Coccidioides posadasii str. Silveira   48 39
No Yes Coccidioides immitis RMSCC 3703   35 30
No Yes Coccidioides immitis RMSCC 2394   44 36
No Yes Coccidioides immitis H538.4   38 31
No Yes Ajellomyces dermatitidis ER-3   40 34
No Yes Histoplasma capsulatum H143   35 30
No Yes Histoplasma capsulatum H88   42 35
No Yes Histoplasma capsulatum G186AR   40 33
No Yes Aspergillus fumigatus A1163   44 38
No Yes Candida albicans WO-1   38 28
No Yes Saccharomyces cerevisiae UC5   33 26
No Yes Saccharomyces cerevisiae PW5   29 23
No Yes Saccharomyces cerevisiae FL100   15 12
No Yes Saccharomyces cerevisiae CLIB382   4 4
No Yes Saccharomyces cerevisiae CLIB324   14 12
No Yes Saccharomyces cerevisiae CBS7960   29 24
No Yes Saccharomyces cerevisiae YJM269   33 25
No Yes Saccharomyces cerevisiae T7   38 30
No Yes Saccharomyces cerevisiae FostersB   27 23
No Yes Saccharomyces cerevisiae FostersO   23 19
No Yes Saccharomyces cerevisiae VL3   25 20
No Yes Saccharomyces cerevisiae Vin13   28 25
No Yes Saccharomyces cerevisiae LalvinQA23   33 26
No Yes Saccharomyces cerevisiae AWRI796   26 22
No Yes Saccharomyces cerevisiae Sigma1278b   38 31
No Yes Saccharomyces cerevisiae W303   36 28
No Yes Saccharomyces cerevisiae JAY291   35 28
No Yes Saccharomyces cerevisiae AWRI1631   23 19
No Yes Saccharomyces cerevisiae YPS163   11 11
No Yes Saccharomyces cerevisiae M22   10 9
No Yes Saccharomyces cerevisiae T73   14 12
No Yes Saccharomyces cerevisiae CLIB215   24 19
No Yes Saccharomyces cerevisiae Y10   14 10
No Yes Saccharomyces cerevisiae YJM789   38 30
No Yes Saccharomyces cerevisiae YJM789   38 30
No Yes Saccharomyces cerevisiae RM11-1a   37 29
No Yes Saccharomyces cerevisiae RM11-1a   36 29
No Yes Saccharomyces cerevisiae SGD (SGD) Baker's yeast 39 31
No Yes Schizosaccharomyces pombe 972h-   35 24
No Yes Batrachochytrium dendrobatidis JEL423   41 31
No Yes Batrachochytrium dendrobatidis JAM81   55 40
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 359 337
No Yes Hordeum vulgare 22 Domesticated barley 593 562
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 479 444
No Yes Trypanosoma brucei Lister 427 v4.1   6 6
No Yes Neospora caninum Nc-Liverpool 6.2   22 17
No Yes Plasmodium falciparum HB3   15 12
No Yes Plasmodium falciparum Dd2   13 11
No Yes Chroococcidiopsis thermalis PCC 7203   80 56
No Yes Chamaesiphon minutus PCC 6605   75 60
No Yes Synechocystis sp. PCC 6803 substr. PCC-P   42 39
No Yes Synechocystis sp. PCC 6803 substr. PCC-N   42 39
No Yes Synechocystis sp. PCC 6803 substr. GT-I   42 39
No Yes Synechocystis sp. PCC 6803   49 46
No Yes Cyanobium gracile PCC 6307   33 30
No Yes Dactylococcopsis salina PCC 8305   15 15
No Yes Synechococcus sp. JA-2-3B'a(2-13)   4 4
No Yes Synechococcus sp. JA-3-3Ab   17 17
No Yes Synechococcus sp. RCC307   1 1
No Yes Synechococcus sp. WH 8102   1 1
No Yes Synechococcus sp. WH 7803   1 1
No Yes Synechococcus sp. PCC 7002   17 13
No Yes Synechococcus elongatus PCC 6301   3 3
No Yes Crinalium epipsammum PCC 9333   13 13
No Yes Oscillatoria nigro-viridis PCC 7112   48 45
No Yes Oscillatoria acuminata PCC 6304   29 29
No Yes Arthrospira platensis NIES-39   74 73
No Yes Cyanothece sp. PCC 7822   42 40
No Yes Cyanothece sp. PCC 7425   56 53
No Yes Cyanothece sp. PCC 7424   44 41
No Yes Cyanothece sp. ATCC 51142   34 32
No Yes Cyanothece sp. PCC 8801   25 25
No Yes Cyanobacterium aponinum PCC 10605   28 21
No Yes Cyanobacterium stanieri PCC 7202   3 3
No Yes Gloeobacter kilaueensis Gloeobacter sp. JS   49 43
No Yes Pleurocapsa minor Pleurocapsa sp. PCC 7327   23 19
No Yes Stanieria cyanosphaera PCC 7437   28 24
No Yes Calothrix parietina Calothrix sp. PCC 6303   23 22
No Yes Cylindrospermum stagnale PCC 7417   32 29
No Yes Anabaena cylindrica PCC 7122   56 51
No Yes Candidatus Phytoplasma solani tobfin_28409   1 1
No Yes Candidatus Phytoplasma australiense Strawberry lethal yellows phytoplasma (CPA) str. NZSb11   7 7
No Yes Candidatus Phytoplasma australiense   4 4
No Yes Mesoplasma florum W37   9 9
No Yes Spiroplasma syrphidicola EA-1   8 7
No Yes Spiroplasma diminutum CUAS-1   9 9
No Yes Spiroplasma chrysopicola DF-1   9 8
No Yes Spiroplasma taiwanense CT-1   8 8
No Yes Spiroplasma apis B31   14 14
No Yes Ureaplasma parvum serovar 3 str. ATCC 700970   1 1
No Yes Mycoplasma leachii PG50   6 5
No Yes Mycoplasma mycoides subsp. mycoides SC str. Gladysdale   8 7
No Yes Mycoplasma mycoides subsp. mycoides SC str. PG1   5 5
No Yes Mycoplasma cynos C142   2 2
No Yes Mycoplasma bovis Hubei-1   4 4
No Yes Mycoplasma bovis PG45   7 7
No Yes Mycoplasma putrefaciens Mput9231   3 3
No Yes Mycoplasma fermentans JER   3 3
No Yes Mycoplasma fermentans PG18   7 7
No Yes Mycoplasma agalactiae   1 1
No Yes Mycoplasma hyorhinis SK76   9 9
No Yes Mycoplasma hyorhinis MCLD   5 5
No Yes Mycoplasma hyorhinis HUB-1   7 7
No Yes Mycoplasma hyorhinis DBS 1050   8 8
No Yes Mycoplasma hyopneumoniae 168-L   2 2
No Yes Mycoplasma hyopneumoniae 7422   2 2
No Yes Mycoplasma hyopneumoniae 232   2 2
No Yes Mycoplasma hyopneumoniae 7448   2 2
No Yes Mycoplasma hyopneumoniae J   2 2
No Yes Gordonibacter pamelaeae 7-10-1-b   33 27
No Yes Adlercreutzia equolifaciens DSM 19450   14 13
No Yes Frankia sp. EuI1c   228 214
No Yes Frankia sp. CcI3   57 55
No Yes Nocardiopsis alba ATCC BAA-2165   119 110
No Yes Streptomyces albus J1074   130 119
No Yes Streptomyces rapamycinicus NRRL 5491   290 262
No Yes Streptomyces davawensis JCM 4913   217 192
No Yes Streptomyces fulvissimus DSM 40593   156 138
No Yes Streptomyces venezuelae ATCC 10712   172 150
No Yes Streptomyces collinus Tu 365   148 130
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488   207 191
No Yes Streptomyces hygroscopicus subsp. jinggangensis TL01   241 221
No Yes Saccharothrix espanaensis DSM 44229   213 194
No Yes Amycolatopsis mediterranei RB   325 302
No Yes Amycolatopsis mediterranei S699   325 302
No Yes Amycolatopsis mediterranei S699   325 302
No Yes Amycolatopsis orientalis HCCB10007   256 233
No Yes Propionibacterium avidum 44067   14 14
No Yes Propionibacterium acnes ATCC 11828   11 11
No Yes Propionibacterium acnes TypeIA2 P.acn31   13 13
No Yes Propionibacterium acnes TypeIA2 P.acn17   13 13
No Yes Propionibacterium acnes TypeIA2 P.acn33   13 13
No Yes Propionibacterium acnes C1   16 16
No Yes Propionibacterium acnes HL096PA1   16 16
No Yes Propionibacterium acnes 6609   12 12
No Yes Propionibacterium acnes 266   14 14
No Yes Propionibacterium acnes KPA171202   13 13
No Yes Propionibacterium acidipropionici ATCC 4875   41 39
No Yes Actinoplanes friuliensis DSM 7358   247 215
No Yes Rhodococcus pyridinivorans SB3094   118 113
No Yes Rhodococcus erythropolis CCM2595   227 211
No Yes Nocardia brasiliensis ATCC 700358   350 322
No Yes Mycobacterium sp. MOTT36Y   181 171
No Yes Mycobacterium sp. JDM601   141 135
No Yes Mycobacterium abscessus subsp. bolletii 50594   197 188
No Yes Mycobacterium liflandii 128FXT   114 109
No Yes Mycobacterium sp. KMS   198 184
No Yes Mycobacterium sp. MCS   191 178
No Yes Mycobacterium yongonense 05-1390   168 160
No Yes Mycobacterium intracellulare MOTT-64   191 177
No Yes Mycobacterium indicus pranii MTCC 9506   175 164
No Yes Mycobacterium intracellulare MOTT-02   182 169
No Yes Mycobacterium avium subsp. paratuberculosis MAP4   132 128
No Yes Mycobacterium avium subsp. paratuberculosis K-10   133 129
No Yes Mycobacterium canettii CIPT 140070017   76 74
No Yes Mycobacterium canettii CIPT 140060008   69 67
No Yes Mycobacterium canettii CIPT 140070008   71 69
No Yes Mycobacterium canettii CIPT 140070010   68 66
No Yes Mycobacterium tuberculosis EAI5/NITR206   65 64
No Yes Mycobacterium tuberculosis EAI5   62 61
No Yes Mycobacterium tuberculosis CAS/NITR204   69 68
No Yes Mycobacterium tuberculosis str. Beijing/NITR203   81 79
No Yes Mycobacterium tuberculosis UT205   65 63
No Yes Mycobacterium tuberculosis RGTB423   67 66
No Yes Mycobacterium tuberculosis RGTB327   71 69
No Yes Mycobacterium tuberculosis CTRI-2   80 78
No Yes Mycobacterium tuberculosis str. Erdman = ATCC 35801   68 67
No Yes Mycobacterium tuberculosis KZN 605   81 79
No Yes Mycobacterium tuberculosis KZN 4207   76 74
No Yes Mycobacterium tuberculosis CCDC5180   73 72
No Yes Mycobacterium tuberculosis CCDC5079   85 83
No Yes Mycobacterium tuberculosis CCDC5079   85 83
No Yes Mycobacterium tuberculosis H37Ra   80 78
No Yes Mycobacterium tuberculosis str. Haarlem/NITR202   54 54
No Yes Mycobacterium tuberculosis str. Haarlem   72 70
No Yes Mycobacterium tuberculosis F11   82 80
No Yes Mycobacterium tuberculosis H37Rv   80 78
No Yes Mycobacterium tuberculosis CDC1551   67 65
No Yes Mycobacterium bovis AF2122/97   64 62
No Yes Mycobacterium bovis BCG str. Korea 1168P   66 64
No Yes Mycobacterium bovis BCG str. Mexico   65 63
No Yes Mycobacterium bovis BCG str. Tokyo 172   63 61
No Yes Mycobacterium gilvum Spyr1   200 187
No Yes Mycobacterium smegmatis str. MC2 155   234 215
No Yes Mycobacterium leprae TN   10 10
No Yes Mycobacterium kansasii ATCC 12478   135 128
No Yes Corynebacterium maris DSM 45190   24 23
No Yes Corynebacterium halotolerans YIM 70093 = DSM 44683   33 31
No Yes Corynebacterium terpenotabidum Y-11   37 35
No Yes Corynebacterium ulcerans BR-AD22   17 16
No Yes Corynebacterium ulcerans 809   17 16
No Yes Corynebacterium urealyticum DSM 7111   19 19
No Yes Corynebacterium argentoratense DSM 44202   15 15
No Yes Corynebacterium callunae DSM 20147   34 33
No Yes Corynebacterium pseudotuberculosis 258   15 14
No Yes Corynebacterium pseudotuberculosis Cp162   12 11
No Yes Corynebacterium pseudotuberculosis P54B96   15 14
No Yes Corynebacterium pseudotuberculosis 267   15 14
No Yes Corynebacterium pseudotuberculosis 1/06-A   15 14
No Yes Corynebacterium pseudotuberculosis 42/02-A   15 14
No Yes Corynebacterium pseudotuberculosis 3/99-5   15 14
No Yes Corynebacterium pseudotuberculosis 31   14 13
No Yes Corynebacterium pseudotuberculosis CIP 52.97   14 13
No Yes Corynebacterium pseudotuberculosis PAT10   15 14
No Yes Corynebacterium pseudotuberculosis I19   15 14
No Yes Corynebacterium pseudotuberculosis FRC41   14 13
No Yes Corynebacterium pseudotuberculosis C231   15 14
No Yes Corynebacterium pseudotuberculosis 1002   14 14
No Yes Corynebacterium glutamicum MB001   26 24
No Yes Corynebacterium glutamicum SCgG2   32 30
No Yes Corynebacterium glutamicum SCgG1   33 31
No Yes Corynebacterium glutamicum ATCC 13032   28 26
No Yes Corynebacterium glutamicum ATCC 13032   28 26
No Yes Corynebacterium glutamicum ATCC 13032   28 26
No Yes Corynebacterium diphtheriae BH8   33 33
No Yes Corynebacterium diphtheriae INCA 402   18 18
No Yes Corynebacterium diphtheriae VA01   19 19
No Yes Corynebacterium diphtheriae HC04   22 22
No Yes Corynebacterium diphtheriae HC03   19 19
No Yes Corynebacterium diphtheriae HC02   20 20
No Yes Corynebacterium diphtheriae HC01   24 24
No Yes Corynebacterium diphtheriae 241   22 22
No Yes Corynebacterium diphtheriae CDCE 8392   25 25
No Yes Corynebacterium diphtheriae PW8   19 19
No Yes Corynebacterium diphtheriae C7 (beta)   25 25
No Yes Corynebacterium diphtheriae 31A   31 31
No Yes Leifsonia xyli subsp. cynodontis DSM 46306   30 30
No Yes Clavibacter michiganensis subsp. sepedonicus   119 118
No Yes Clavibacter michiganensis subsp. nebraskensis NCPPB 2581   27 27
No Yes Gardnerella vaginalis ATCC 14019   1 1
No Yes Bifidobacterium longum NCC2705   12 11
No Yes Bifidobacterium longum DJO10A   26 24
No Yes Bifidobacterium longum subsp. infantis 157F   22 21
No Yes Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222   28 26
No Yes Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222   28 26
No Yes Bifidobacterium longum subsp. longum KACC 91563   24 22
No Yes Bifidobacterium longum subsp. longum BBMN68   17 16
No Yes Bifidobacterium longum subsp. longum F8   10 10
No Yes Bifidobacterium longum subsp. longum JCM 1217   23 22
No Yes Bifidobacterium thermophilum RBL67   10 10
No Yes Bifidobacterium animalis subsp. animalis ATCC 25527   9 9
No Yes Bifidobacterium animalis subsp. lactis Bl12   7 7
No Yes Bifidobacterium animalis subsp. lactis B420   7 7
No Yes Bifidobacterium animalis subsp. lactis ATCC 27673   9 9
No Yes Bifidobacterium animalis subsp. lactis BLC1   7 7
No Yes Bifidobacterium animalis subsp. lactis CNCM I-2494   6 6
No Yes Bifidobacterium animalis subsp. lactis Bi-07   7 7
No Yes Bifidobacterium animalis subsp. lactis V9   7 7
No Yes Bifidobacterium animalis subsp. lactis DSM 10140   7 7
No Yes Bifidobacterium animalis subsp. lactis BB-12   6 6
No Yes Bifidobacterium animalis subsp. lactis AD011   7 7
No Yes Bifidobacterium breve UCC2003   27 26
No Yes Bifidobacterium asteroides PRL2011   14 12
No Yes Bifidobacterium bifidum PRL2010   15 14
No Yes Bifidobacterium bifidum BGN4   13 12
No Yes Actinomyces graevenitzii C83   10 10
No Yes Actinomyces odontolyticus ATCC 17982   12 12
No Yes Actinomyces viscosus C505   31 28
No Yes Dehalococcoides mccartyi GY50   4 4
No Yes Dehalococcoides mccartyi DCMB5   4 4
No Yes Dehalococcoides mccartyi BTF08   8 8
No Yes Dehalococcoides sp. GT   5 5
No Yes Dehalococcoides sp. VS   9 9
No Yes Dehalococcoides sp. CBDB1   4 4
No Yes Chthonomonas calidirosea T49   5 3
No Yes Deinococcus peraridilitoris DSM 19664   33 33
No Yes Thermus oshimai JL-2   10 10
No Yes Thermus thermophilus JL-18   14 14
No Yes Thermus thermophilus SG0.5JP17-16   15 15
No Yes Thermus thermophilus HB8   9 9
No Yes [Eubacterium] cylindroides [Eubacterium] cylindroides T2-87   8 8
No Yes Erysipelothrix rhusiopathiae SY1027   32 27
No Yes Eubacterium siraeum V10Sc8a   21 17
No Yes Clostridium thermocellum DSM 1313   27 21
No Yes [Clostridium] stercorarium Clostridiu subsp. stercorarium DSM 8532   69 41
No Yes Faecalibacterium prausnitzii L2-6   43 28
No Yes Ruminococcus champanellensis 18P13   29 21
No Yes Sulfobacillus acidophilus TPY   51 51
No Yes Clostridium acidurici 9a   43 31
No Yes Desulfosporosinus meridiei DSM 13257   65 56
No Yes Desulfitobacterium dichloroeliminans LMG P-21439   28 25
No Yes Desulfitobacterium hafniense DCB-2   100 87
No Yes Desulfotomaculum gibsoniae DSM 7213   66 61
No Yes Clostridium difficile BI1   76 64
No Yes Clostridium difficile R20291   73 61
No Yes Clostridium difficile CD196   73 61
No Yes Clostridium saccharolyticum Clostridium cf. saccharolyticum K10   38 29
No Yes Coprococcus catus GD/7   31 27
No Yes Roseburia intestinalis XB6B4   76 50
No Yes Candidatus Arthromitus sp. SFB-rat-Yit   7 6
No Yes Candidatus Arthromitus sp. SFB-mouse-Yit   8 7
No Yes Clostridium sp. SY8519   48 37
No Yes Clostridium saccharobutylicum DSM 13864   54 44
No Yes Clostridium autoethanogenum DSM 10061   65 55
No Yes Clostridium saccharoperbutylacetonicum N1-4(HMT)   187 140
No Yes Clostridium kluyveri NBRC 12016   58 50
No Yes Clostridium tetani genome 12124569   30 25
No Yes Clostridium perfringens SM101   30 22
No Yes Clostridium perfringens str. 13   28 20
No Yes Clostridium pasteurianum BC1   76 66
No Yes Clostridium botulinum H04402 065   70 59
No Yes Clostridium botulinum BKT015925   17 15
No Yes Clostridium botulinum F str. 230613   61 50
No Yes Clostridium botulinum F str. Langeland   71 58
No Yes Clostridium botulinum E3 str. Alaska E43   31 24
No Yes Clostridium botulinum B1 str. Okra   72 61
No Yes Clostridium botulinum Ba4 str. 657   81 69
No Yes Clostridium botulinum A2 str. Kyoto   75 60
No Yes Clostridium botulinum A3 str. Loch Maree   81 66
No Yes Clostridium botulinum A str. Hall   66 54
No Yes Clostridium botulinum A str. ATCC 19397   70 58
No Yes Clostridium acetobutylicum DSM 1731   52 46
No Yes Clostridium acetobutylicum EA 2018   52 46
No Yes Thermoanaerobacterium saccharolyticum JW/SL-YS485   24 19
No Yes Thermoanaerobacterium thermosaccharolyticum M0795   22 18
No Yes Thermacetogenium phaeum DSM 12270   31 28
No Yes Thermoanaerobacter sp. X513   21 18
No Yes Halobacteroides halobius DSM 5150   16 15
No Yes Carnobacterium maltaromaticum LMA28   56 45
No Yes Melissococcus plutonius ATCC 35311   19 14
No Yes Enterococcus mundtii QU 25   40 33
No Yes Enterococcus casseliflavus EC20   67 53
No Yes Enterococcus faecium Aus0085   62 53
No Yes Enterococcus faecium NRRL B-2354   32 27
No Yes Enterococcus faecium DO   69 59
No Yes Enterococcus faecalis str. Symbioflor 1   42 33
No Yes Enterococcus faecalis D32   39 31
No Yes Enterococcus faecalis OG1RF   35 27
No Yes Enterococcus faecalis V583   43 34
No Yes Leuconostoc carnosum JB16   17 16
No Yes Leuconostoc mesenteroides subsp. mesenteroides J18   23 18
No Yes Leuconostoc gelidum JB7   16 15
No Yes Lactobacillus paracasei subsp. paracasei 8700:2   32 31
No Yes Lactobacillus casei LOCK919   33 33
No Yes Lactobacillus casei W56   31 31
No Yes Lactobacillus casei LC2W   31 31
No Yes Lactobacillus casei BD-II   31 31
No Yes Lactobacillus casei BL23   29 29
No Yes Lactobacillus casei str. Zhang   27 27
No Yes Lactobacillus rhamnosus LOCK908   26 26
No Yes Lactobacillus rhamnosus LOCK900   33 33
No Yes Lactobacillus rhamnosus ATCC 8530   28 28
No Yes Lactobacillus rhamnosus GG   29 27
No Yes Lactobacillus rhamnosus GG   29 27
No Yes Lactobacillus johnsonii N6.2   28 25
No Yes Lactobacillus johnsonii DPC 6026   25 23
No Yes Lactobacillus johnsonii NCC 533   25 23
No Yes Lactobacillus salivarius UCC118   17 16
No Yes Lactobacillus fermentum F-6   36 35
No Yes Lactobacillus fermentum CECT 5716   4 3
No Yes Lactobacillus amylovorus GRL 1112   19 17
No Yes Lactobacillus reuteri TD1   11 11
No Yes Lactobacillus reuteri I5007   12 12
No Yes Lactobacillus reuteri JCM 1112   11 10
No Yes Lactobacillus reuteri SD2112   10 8
No Yes Lactobacillus plantarum 16   60 60
No Yes Lactobacillus plantarum ZJ316   50 50
No Yes Lactobacillus plantarum subsp. plantarum ST-III   47 46
No Yes Lactobacillus plantarum subsp. plantarum P-8   49 49
No Yes Lactobacillus plantarum WCFS1   49 48
No Yes Lactobacillus helveticus R0052   15 14
No Yes Lactobacillus helveticus H10   27 26
No Yes Lactobacillus helveticus CNRZ32   11 10
No Yes Lactobacillus delbrueckii subsp. bulgaricus ND02   16 15
No Yes Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842   11 11
No Yes Lactobacillus delbrueckii subsp. bulgaricus 2038   15 15
No Yes Lactobacillus brevis KB290   51 48
No Yes Lactobacillus acidophilus La-14   23 20
No Yes Lactobacillus acidophilus NCFM   23 20
No Yes Pediococcus pentosaceus SL4   14 14
No Yes Lactococcus garvieae Lg2   31 31
No Yes Lactococcus lactis subsp. lactis KLDS 4.0325   37 33
No Yes Lactococcus lactis subsp. lactis IO-1   31 29
No Yes Lactococcus lactis subsp. lactis CV56   38 34
No Yes Lactococcus lactis subsp. lactis KF147   39 37
No Yes Lactococcus lactis subsp. lactis Il1403   59 51
No Yes Lactococcus lactis subsp. cremoris KW2   28 26
No Yes Lactococcus lactis subsp. cremoris UC509.9   65 60
No Yes Lactococcus lactis subsp. cremoris A76   95 85
No Yes Lactococcus lactis subsp. cremoris NZ9000   69 65
No Yes Lactococcus lactis subsp. cremoris SK11   83 75
No Yes Streptococcus constellatus subsp. pharyngis C1050   15 14
No Yes Streptococcus constellatus subsp. pharyngis C818   15 14
No Yes Streptococcus constellatus subsp. pharyngis C232   15 14
No Yes Streptococcus intermedius B196   16 14
No Yes Streptococcus intermedius C270   21 19
No Yes Streptococcus anginosus C238   45 42
No Yes Streptococcus anginosus C1051   21 19
No Yes Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069   43 38
No Yes Streptococcus gallolyticus subsp. gallolyticus ATCC 43143   40 35
No Yes Streptococcus lutetiensis 033   26 23
No Yes Streptococcus equi subsp. zooepidemicus ATCC 35246   20 16
No Yes Streptococcus equi subsp. zooepidemicus MGCS10565   24 21
No Yes Streptococcus equi subsp. zooepidemicus   24 22
No Yes Streptococcus dysgalactiae subsp. equisimilis 167   32 28
No Yes Streptococcus dysgalactiae subsp. equisimilis AC-2713   45 40
No Yes Streptococcus dysgalactiae subsp. equisimilis ATCC 12394   29 25
No Yes Streptococcus dysgalactiae subsp. equisimilis RE378   35 30
No Yes Streptococcus oligofermentans AS 1.3089   17 15
No Yes Streptococcus iniae SF1   42 39
No Yes Streptococcus parasanguinis FW213   25 22
No Yes Streptococcus pyogenes HSC5   20 16
No Yes Streptococcus pyogenes A20   17 14
No Yes Streptococcus pyogenes MGAS1882   17 13
No Yes Streptococcus pyogenes MGAS15252   17 13
No Yes Streptococcus pyogenes Alab49   20 16
No Yes Streptococcus pyogenes MGAS10750   19 16
No Yes Streptococcus pyogenes MGAS10270   18 14
No Yes Streptococcus pyogenes MGAS2096   21 17
No Yes Streptococcus pyogenes MGAS9429   19 15
No Yes Streptococcus pyogenes MGAS6180   20 15
No Yes Streptococcus pyogenes NZ131   20 16
No Yes Streptococcus pyogenes MGAS8232   23 18
No Yes Streptococcus pyogenes MGAS10394   15 12
No Yes Streptococcus pyogenes MGAS315   18 14
No Yes Streptococcus pyogenes SSI-1   17 13
No Yes Streptococcus pyogenes M1 476   16 13
No Yes Streptococcus pyogenes MGAS5005   17 14
No Yes Streptococcus pyogenes M1 GAS   16 13
No Yes Streptococcus pneumoniae A026   12 11
No Yes Streptococcus pneumoniae ST556   19 18
No Yes Streptococcus pneumoniae SPNA45   11 10
No Yes Streptococcus pneumoniae SPN994039   12 11
No Yes Streptococcus pneumoniae SPN994038   12 11
No Yes Streptococcus pneumoniae SPN034183   12 11
No Yes Streptococcus pneumoniae SPN034156   11 10
No Yes Streptococcus pneumoniae INV104   13 12
No Yes Streptococcus pneumoniae INV200   17 16
No Yes Streptococcus pneumoniae OXC141   12 11
No Yes Streptococcus pneumoniae gamPNI0373   20 19
No Yes Streptococcus pneumoniae AP200   22 21
No Yes Streptococcus pneumoniae ATCC 700669   13 12
No Yes Streptococcus pneumoniae TCH8431/19A   20 19
No Yes Streptococcus pneumoniae CGSP14   18 17
No Yes Streptococcus pneumoniae G54   19 18
No Yes Streptococcus pneumoniae JJA   21 20
No Yes Streptococcus pneumoniae 70585   21 20
No Yes Streptococcus pneumoniae Hungary19A-6   20 19
No Yes Streptococcus pneumoniae Taiwan19F-14   18 17
No Yes Streptococcus pneumoniae D39   14 13
No Yes Streptococcus pneumoniae 670-6B   22 21
No Yes Streptococcus pneumoniae R6   16 15
No Yes Streptococcus pneumoniae TIGR4   19 18
No Yes Streptococcus agalactiae ILRI112   28 25
No Yes Streptococcus agalactiae ILRI005   49 46
No Yes Streptococcus agalactiae 09mas018883   22 18
No Yes Streptococcus agalactiae 2-22   17 16
No Yes Streptococcus agalactiae SA20-06   15 12
No Yes Streptococcus agalactiae GD201008-001   20 16
No Yes Streptococcus agalactiae NEM316   19 16
No Yes Streptococcus agalactiae 2603V/R   23 19
No Yes Streptococcus mutans GS-5   28 26
No Yes Streptococcus mutans LJ23   26 24
No Yes Streptococcus mutans UA159   32 30
No Yes Streptococcus thermophilus MN-ZLW-002   21 20
No Yes Streptococcus thermophilus JIM 8232   22 21
No Yes Streptococcus thermophilus ND03   20 19
No Yes Streptococcus thermophilus CNRZ1066   18 17
No Yes Streptococcus thermophilus LMG 18311   17 16
No Yes Streptococcus suis T15   37 35
No Yes Streptococcus suis TL13   18 16
No Yes Streptococcus suis SC070731   16 14
No Yes Streptococcus suis S735   18 16
No Yes Streptococcus suis ST3   18 15
No Yes Streptococcus suis D9   23 19
No Yes Streptococcus suis SS12   17 15
No Yes Streptococcus suis D12   19 16
No Yes Streptococcus suis ST1   17 16
No Yes Streptococcus suis A7   16 14
No Yes Streptococcus suis JS14   16 14
No Yes Streptococcus suis BM407   17 15
No Yes Streptococcus suis SC84   17 15
No Yes Streptococcus suis GZ1   17 15
No Yes Streptococcus suis 98HAH33   17 15
No Yes Streptococcus suis 05ZYH33   15 13
No Yes Streptococcus salivarius CCHSS3   39 38
No Yes Streptococcus salivarius JIM8777   14 13
No Yes Exiguobacterium antarcticum B7   12 10
No Yes Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1   36 29
No Yes Thermobacillus composti KWC4   155 107
No Yes Paenibacillus sp. Y412MC10   368 240
No Yes Paenibacillus mucilaginosus KNP414   391 242
No Yes Paenibacillus mucilaginosus K02   404 251
No Yes Paenibacillus larvae subsp. larvae DSM 25430   69 62
No Yes Paenibacillus polymyxa CR1   183 125
No Yes Paenibacillus polymyxa SC2   162 111
No Yes Paenibacillus polymyxa E681   137 99
No Yes Listeria monocytogenes EGD sequence   41 34
No Yes Listeria monocytogenes N53-1   36 30
No Yes Listeria monocytogenes La111   36 30
No Yes Listeria monocytogenes serotype 4b str. LL195   43 36
No Yes Listeria monocytogenes 07PF0776   43 36
No Yes Listeria monocytogenes M7   34 28
No Yes Listeria monocytogenes J1-220   42 36
No Yes Listeria monocytogenes J1816   41 34
No Yes Listeria monocytogenes SLCC2376   38 31
No Yes Listeria monocytogenes SLCC5850   41 34
No Yes Listeria monocytogenes ATCC 19117   41 35
No Yes Listeria monocytogenes L312   42 35
No Yes Listeria monocytogenes SLCC2479   42 35
No Yes Listeria monocytogenes SLCC7179   40 34
No Yes Listeria monocytogenes SLCC2540   46 39
No Yes Listeria monocytogenes SLCC2378   43 36
No Yes Listeria monocytogenes serotype 1/2b str. SLCC2755   44 37
No Yes Listeria monocytogenes serotype 1/2c str. SLCC2372   43 36
No Yes Listeria monocytogenes serotype 7 str. SLCC2482   43 36
No Yes Listeria monocytogenes 08-5578   42 36
No Yes Listeria monocytogenes 08-5923   41 35
No Yes Listeria monocytogenes L99   35 29
No Yes Listeria monocytogenes HCC23   34 28
No Yes Listeria monocytogenes 10403S   41 34
No Yes Listeria monocytogenes J0161   40 34
No Yes Listeria monocytogenes Finland 1998   39 33
No Yes Listeria monocytogenes FSL R2-561   42 35
No Yes Listeria monocytogenes serotype 4b str. F2365   43 36
No Yes Listeria monocytogenes EGD-e   43 36
No Yes Geobacillus sp. C56-T3   40 33
No Yes Geobacillus sp. Y4.1MC1   47 41
No Yes Geobacillus sp. Y412MC52   35 31
No Yes Geobacillus sp. Y412MC61   37 32
No Yes Amphibacillus xylanus NBRC 15112   37 25
No Yes Bacillus amyloliquefaciens subsp. plantarum sequencing   40 33
No Yes Bacillus amyloliquefaciens subsp. plantarum UCMB5033   40 34
No Yes Bacillus amyloliquefaciens subsp. plantarum AS43.3   38 32
No Yes Bacillus amyloliquefaciens subsp. plantarum YAU B9601-Y2   41 34
No Yes Bacillus amyloliquefaciens subsp. plantarum UCMB5113   38 32
No Yes Bacillus amyloliquefaciens subsp. plantarum UCMB5036   35 30
No Yes Bacillus amyloliquefaciens subsp. plantarum CAU B946   38 31
No Yes Bacillus amyloliquefaciens LFB112   38 31
No Yes Bacillus amyloliquefaciens CC178   37 31
No Yes Bacillus amyloliquefaciens Y2   40 33
No Yes Bacillus amyloliquefaciens IT-45   39 32
No Yes Bacillus amyloliquefaciens XH7   38 32
No Yes Bacillus amyloliquefaciens LL3   37 31
No Yes Bacillus amyloliquefaciens TA208   38 32
No Yes Bacillus amyloliquefaciens DSM 7   37 31
No Yes Bacillus licheniformis 9945A   66 56
No Yes Bacillus subtilis PY79   52 40
No Yes Bacillus subtilis XF-1   45 36
No Yes Bacillus subtilis QB928   53 41
No Yes Bacillus subtilis BSn5   49 39
No Yes Bacillus subtilis subsp. subtilis str. BAB-1   47 38
No Yes Bacillus subtilis subsp. subtilis str. BSP1   46 37
No Yes Bacillus subtilis subsp. subtilis str. RO-NN-1   50 40
No Yes Bacillus subtilis subsp. subtilis 6051-HGW   53 41
No Yes Bacillus subtilis subsp. spizizenii TU-B-10   53 44
No Yes Bacillus subtilis subsp. spizizenii str. W23   57 47
No Yes Bacillus subtilis subsp. natto BEST195   69 58
No Yes Bacillus licheniformis DSM 13 = ATCC 14580   61 53
No Yes Bacillus infantis NRRL B-14911   65 52
No Yes Bacillus cereus subsp. cytotoxis NVH 391-98   38 36
No Yes Bacillus toyonensis BCT-7112   58 48
No Yes Bacillus thuringiensis HD-771   66 57
No Yes Bacillus thuringiensis HD-789   81 72
No Yes Bacillus thuringiensis MC28   65 55
No Yes Bacillus thuringiensis serovar chinensis CT-43   71 63
No Yes Bacillus thuringiensis YBT-1518   69 63
No Yes Bacillus thuringiensis Bt407   67 61
No Yes Bacillus thuringiensis serovar konkukian str. 97-27   67 57
No Yes Bacillus thuringiensis serovar kurstaki str. HD73   88 71
No Yes Bacillus thuringiensis BMB171   63 54
No Yes Bacillus thuringiensis serovar finitimus YBT-020   73 62
No Yes Bacillus thuringiensis serovar thuringiensis str. IS5056   76 68
No Yes Bacillus cereus FRI-35   70 61
No Yes Bacillus cereus biovar anthracis str. CI   81 65
No Yes Bacillus cereus AH820   65 55
No Yes Bacillus cereus AH187   83 71
No Yes Bacillus cereus B4264   64 54
No Yes Bacillus cereus G9842   68 58
No Yes Bacillus cereus Q1   77 66
No Yes Bacillus cereus F837/76   56 48
No Yes Bacillus cereus NC7401   81 69
No Yes Bacillus cereus E33L   77 66
No Yes Bacillus cereus ATCC 14579   61 53
No Yes Bacillus cereus ATCC 10987   65 57
No Yes Bacillus anthracis str. H9401   63 55
No Yes Bacillus anthracis str. CDC 684   59 52
No Yes Bacillus anthracis str. 'Ames Ancestor'   60 52
No Yes Bacillus anthracis str. Sterne   58 49
No Yes Bacillus anthracis str. Ames   56 48
No Yes Bacillus anthracis str. A2012   4 4
No Yes Bacillus megaterium WSH-002   55 48
No Yes Bacillus megaterium QM B1551   75 63
No Yes Bacillus coagulans 36D1   44 38
No Yes Staphylococcus aureus subsp. aureus MSHR1132   28 25
No Yes Staphylococcus pseudintermedius ED99   14 11
No Yes Staphylococcus pasteuri SP1   19 18
No Yes Staphylococcus lugdunensis N920143   22 21
No Yes Staphylococcus warneri SG1   24 21
No Yes Staphylococcus epidermidis ATCC 12228   15 15
No Yes Staphylococcus aureus CA-347   33 30
No Yes Staphylococcus aureus Bmb9393   28 25
No Yes Staphylococcus aureus M1   25 22
No Yes Staphylococcus aureus 08BA02176   31 28
No Yes Staphylococcus aureus ST228/18412   22 19
No Yes Staphylococcus aureus ST228/18341   22 19
No Yes Staphylococcus aureus ST228/16125   20 17
No Yes Staphylococcus aureus ST228/16035   22 19
No Yes Staphylococcus aureus ST228/15532   22 19
No Yes Staphylococcus aureus ST228/10497   22 19
No Yes Staphylococcus aureus ST228/10388   22 19
No Yes Staphylococcus aureus 04-02981   22 19
No Yes Staphylococcus aureus RF122   21 18
No Yes Staphylococcus aureus subsp. aureus Z172   29 26
No Yes Staphylococcus aureus subsp. aureus 6850   22 19
No Yes Staphylococcus aureus subsp. aureus SA957   23 20
No Yes Staphylococcus aureus subsp. aureus CN1   21 18
No Yes Staphylococcus aureus subsp. aureus SA40   23 20
No Yes Staphylococcus aureus subsp. aureus 11819-97   23 20
No Yes Staphylococcus aureus subsp. aureus M013   23 20
No Yes Staphylococcus aureus subsp. aureus HO 5096 0412   26 23
No Yes Staphylococcus aureus subsp. aureus VC40   22 19
No Yes Staphylococcus aureus subsp. aureus T0131   25 22
No Yes Staphylococcus aureus subsp. aureus LGA251   24 21
No Yes Staphylococcus aureus subsp. aureus ECT-R 2   23 20
No Yes Staphylococcus aureus subsp. aureus JKD6159   23 21
No Yes Staphylococcus aureus subsp. aureus ED133   24 21
No Yes Staphylococcus aureus subsp. aureus ED98   24 21
No Yes Staphylococcus aureus subsp. aureus TW20   29 26
No Yes Staphylococcus aureus subsp. aureus 55/2053   36 33
No Yes Staphylococcus aureus subsp. aureus TCH60   32 30
No Yes Staphylococcus aureus subsp. aureus str. JKD6008   22 20
No Yes Staphylococcus aureus subsp. aureus 71193   31 28
No Yes Staphylococcus aureus subsp. aureus S0385   34 31
No Yes Staphylococcus aureus subsp. aureus str. Newman   22 19
No Yes Staphylococcus aureus subsp. aureus Mu3   22 19
No Yes Staphylococcus aureus subsp. aureus USA300_TCH1516   22 19
No Yes Staphylococcus aureus subsp. aureus USA300_FPR3757   20 17
No Yes Staphylococcus aureus subsp. aureus JH9   23 20
No Yes Staphylococcus aureus subsp. aureus MSSA476   21 18
No Yes Staphylococcus aureus subsp. aureus MRSA252   37 34
No Yes Staphylococcus aureus subsp. aureus MW2   22 19
No Yes Staphylococcus aureus subsp. aureus N315   23 20
No Yes Staphylococcus aureus subsp. aureus Mu50   23 20
No Yes Staphylococcus aureus subsp. aureus COL   21 18
No Yes Staphylococcus aureus subsp. aureus NCTC 8325   22 19
No Yes Chlorobium phaeobacteroides BS1   6 6
No Yes Salinibacter ruber DSM 13855   39 38
No Yes Rhodothermus marinus SG0.5JP17-172   22 22
No Yes Echinicola vietnamensis DSM 17526   58 47
No Yes Emticicia oligotrophica DSM 17448   58 44
No Yes Prevotella sp. oral taxon 299 str. F0039   10 10
No Yes Prevotella dentalis DSM 3688   34 30
No Yes Porphyromonas gingivalis TDC60   10 10
No Yes Porphyromonas gingivalis W83   22 22
No Yes Alistipes shahii WAL 8301   25 23
No Yes Bacteroides xylanisolvens XB1A   82 71
No Yes Bacteroides fragilis 638R   75 65
No Yes Bacteroides fragilis NCTC 9343   71 62
No Yes Candidatus Uzinura diaspidicola str. ASNER   1 1
No Yes Nonlabens dokdonensis DSW-6   20 19
No Yes Psychroflexus torquis ATCC 700755   54 48
No Yes Riemerella anatipestifer RA-CH-2   6 6
No Yes Riemerella anatipestifer RA-CH-1   6 5
No Yes Riemerella anatipestifer RA-GD   5 5
No Yes Riemerella anatipestifer ATCC 11845 = DSM 15868   5 5
No Yes Blattabacterium sp. (Panesthia angustipennis spadica) Blattabacterium sp. (Panesthia angustipennis spadica) str. BPAA   1 1
No Yes Blattabacterium sp. (Blaberus giganteus)   1 1
No Yes Blattabacterium sp. (Blatta orientalis) Blattabacterium sp. (Blatta orientalis) str. Tarazona   1 1
No Yes Blattabacterium sp. (Periplaneta americana) str. BPLAN   1 1
No Yes Blattabacterium sp. (Cryptocercus punctulatus) str. Cpu   1 1
No Yes Blattabacterium sp. (Mastotermes darwiniensis) str. MADAR   1 1
No Yes Fibrobacter succinogenes subsp. succinogenes S85   11 10
No Yes Chlamydia trachomatis J/6276tet1   1 1
No Yes Chlamydia trachomatis RC-J(s)/122   1 1
No Yes Chlamydia trachomatis RC-F(s)/342   1 1
No Yes Chlamydia trachomatis RC-Fs852   1 1
No Yes Singulisphaera acidiphila DSM 18658   92 81
No Yes Leptospira borgpetersenii serovar Hardjo-bovis str. JB197   19 18
No Yes Leptospira interrogans serovar Lai str. 56601   30 29
No Yes Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130   29 28
No Yes Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'   56 52
No Yes Brachyspira pilosicoli WesB   6 6
No Yes Brachyspira pilosicoli B2904   6 6
No Yes Brachyspira pilosicoli P43/6/78   8 8
No Yes Borrelia garinii NMJW1   1 1
No Yes Borrelia garinii BgVir   1 1
No Yes Borrelia afzelii HLJ01   1 1
No Yes Borrelia afzelii PKo   1 1
No Yes Borrelia burgdorferi CA382   1 1
No Yes Borrelia burgdorferi JD1   1 1
No Yes Borrelia burgdorferi N40   1 1
No Yes Borrelia burgdorferi ZS7   1 1
No Yes Borrelia miyamotoi LB-2001   1 1
No Yes Treponema pedis str. T A4   20 17
No Yes Treponema pallidum str. Fribourg-Blanc   1 1
No Yes Treponema pallidum subsp. pertenue str. Gauthier   1 1
No Yes Treponema pallidum subsp. pertenue str. CDC2   1 1
No Yes Treponema pallidum subsp. pertenue str. SamoaD   1 1
No Yes Treponema pallidum subsp. pallidum str. Mexico A   1 1
No Yes Treponema pallidum subsp. pallidum str. Chicago   1 1
No Yes Treponema pallidum subsp. pallidum DAL-1   1 1
No Yes Treponema pallidum subsp. pallidum str. Nichols   1 1
No Yes Spirochaeta thermophila DSM 6578   42 34
No Yes Thermotoga maritima MSB8   7 6
No Yes Hydrogenobacter thermophilus TK-6   11 11
No Yes Leptospirillum ferriphilum ML-04   25 24
No Yes Fusobacterium nucleatum subsp. vincentii 3_1_36A2   13 12
No Yes Fusobacterium nucleatum subsp. animalis 4_8   11 11
No Yes Acidithiobacillus ferrooxidans ATCC 23270   24 23
No Yes Bdellovibrio exovorus JSS   25 24
No Yes Bdellovibrio bacteriovorus str. Tiberius   28 28
No Yes Arcobacter butzleri 7h1h   19 14
No Yes Arcobacter butzleri ED-1   19 14
No Yes Campylobacter jejuni Waterborne C.jejuni Outbreak   3 3
No Yes Campylobacter jejuni RM1221   4 4
No Yes Campylobacter jejuni subsp. jejuni 00-2544   4 4
No Yes Campylobacter jejuni subsp. jejuni 00-2538   4 4
No Yes Campylobacter jejuni subsp. jejuni 00-2426   3 3
No Yes Campylobacter jejuni subsp. jejuni 00-2425   4 4
No Yes Campylobacter jejuni subsp. jejuni PT14   3 3
No Yes Campylobacter jejuni subsp. jejuni ICDCCJ07001   3 3
No Yes Campylobacter jejuni subsp. jejuni S3   3 3
No Yes Campylobacter jejuni subsp. jejuni M1   3 3
No Yes Campylobacter jejuni subsp. jejuni IA3902   3 3
No Yes Campylobacter jejuni subsp. jejuni 81116   3 3
No Yes Campylobacter jejuni subsp. jejuni 81-176   3 3
No Yes Campylobacter jejuni subsp. jejuni NCTC 11168-BN148   3 3
No Yes Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819   3 3
No Yes Campylobacter coli 76339   3 3
No Yes Campylobacter coli 15-537360   3 3
No Yes Campylobacter coli CVM N29710   3 3
No Yes Helicobacter cetorum MIT 99-5656   2 2
No Yes Helicobacter pylori UM037   1 1
No Yes Helicobacter pylori Shi169   1 1
No Yes Helicobacter pylori Lithuania75   1 1
No Yes Helicobacter pylori 52   1 1
No Yes Helicobacter pylori HPAG1   1 1
No Yes Helicobacter pylori 51   1 1
No Yes Desulfocapsa sulfexigens DSM 10523   38 37
No Yes Desulfobacula toluolica Tol2   96 87
No Yes Lawsonia intracellularis N343   7 7
No Yes Desulfovibrio hydrothermalis AM13 = DSM 14728   98 90
No Yes Desulfovibrio vulgaris RCH1   53 50
No Yes Desulfovibrio vulgaris str. 'Miyazaki F'   58 52
No Yes Desulfovibrio vulgaris str. Hildenborough   54 51
No Yes Desulfovibrio gigas DSM 1382 = ATCC 19364   39 36
No Yes Desulfovibrio desulfuricans ND132   54 49
No Yes Geobacter sp. M18   63 55
No Yes Geobacter sulfurreducens PCA   50 49
No Yes Sorangium cellulosum So0157-2   219 193
No Yes Anaeromyxobacter sp. K   78 75
No Yes Anaeromyxobacter dehalogenans 2CP-C   65 63
No Yes Myxococcus stipitatus DSM 14675   168 149
No Yes Neisseria meningitidis WUE 2594   24 22
No Yes Neisseria meningitidis G2136   19 17
No Yes Neisseria meningitidis M04-240196   24 22
No Yes Neisseria meningitidis M01-240149   23 21
No Yes Neisseria meningitidis NZ-05/33   23 21
No Yes Neisseria meningitidis M01-240355   24 22
No Yes Neisseria meningitidis 8013   22 20
No Yes Neisseria meningitidis 053442   19 17
No Yes Neisseria meningitidis Z2491   20 18
No Yes Neisseria meningitidis H44/76   26 25
No Yes Neisseria meningitidis alpha710   22 21
No Yes Neisseria meningitidis MC58   25 24
No Yes Neisseria gonorrhoeae TCDC-NG08107   12 10
No Yes Neisseria gonorrhoeae FA 1090   11 9
No Yes Candidatus Kinetoplastibacterium oncopeltii TCC290E   2 2
No Yes Candidatus Kinetoplastibacterium galatii TCC219   2 2
No Yes Candidatus Kinetoplastibacterium desouzaii TCC079E   2 2
No Yes Kinetoplastibacterium blastocrithidii Candidatus (ex Strigomonas culicis)   2 2
No Yes Kinetoplastibacterium blastocrithidii Candidatus TCC012E   2 2
No Yes Candidatus Kinetoplastibacterium crithidii (ex Angomonas deanei ATCC 30255)   2 2
No Yes Candidatus Kinetoplastibacterium crithidii TCC036E   2 2
No Yes Burkholderia phenoliruptrix BR3459a   176 134
No Yes Pandoraea pnomenusa 3kgm   103 90
No Yes Ralstonia pickettii 12J   94 77
No Yes Ralstonia solanacearum FQY_4   82 71
No Yes Ralstonia solanacearum Po82   91 81
No Yes Ralstonia solanacearum PSI07   94 84
No Yes Ralstonia solanacearum CMR15   77 66
No Yes Ralstonia solanacearum GMI1000   116 99
No Yes Polynucleobacter necessarius subsp. necessarius STIR1   3 3
No Yes Burkholderia sp. YI23   180 137
No Yes Burkholderia sp. CCGE1003   175 124
No Yes Burkholderia sp. CCGE1001   150 110
No Yes Burkholderia sp. KJ006   163 125
No Yes Burkholderia thailandensis MSMB121   149 115
No Yes Burkholderia pseudomallei MSHR305   146 117
No Yes Burkholderia pseudomallei NCTC 13179   138 109
No Yes Burkholderia pseudomallei BPC006   129 100
No Yes Burkholderia pseudomallei 1026b   134 105
No Yes Burkholderia pseudomallei MSHR346   53 44
No Yes Burkholderia pseudomallei 668   129 101
No Yes Burkholderia pseudomallei 1710b   135 106
No Yes Burkholderia pseudomallei K96243   129 101
No Yes Burkholderia mallei NCTC 10229   187 165
No Yes Burkholderia mallei NCTC 10247   185 164
No Yes Burkholderia mallei ATCC 23344   189 167
No Yes Burkholderia lata   256 196
No Yes Burkholderia ambifaria MC40-6   195 153
No Yes Burkholderia cenocepacia MC0-3   247 195
No Yes Burkholderia cenocepacia AU 1054   218 168
No Yes Burkholderia cenocepacia J2315   240 188
No Yes Burkholderia multivorans ATCC 17616   168 133
No Yes Burkholderia cepacia GG4   148 118
No Yes Candidatus Symbiobacter mobilis Comamonadaceae bacterium CR   20 20
No Yes Alicycliphilus denitrificans BC   67 65
No Yes Variovorax paradoxus B4   142 116
No Yes Variovorax paradoxus EPS   132 104
No Yes Taylorella asinigenitalis 14/45   4 4
No Yes Taylorella equigenitalis 14/56   4 4
No Yes Taylorella equigenitalis ATCC 35865   4 4
No Yes Bordetella pertussis CS   238 231
No Yes Bordetella parapertussis 18323   273 266
No Yes Bordetella parapertussis Bpp5   54 46
No Yes Bordetella bronchiseptica MO149   65 55
No Yes Bordetella bronchiseptica 253   68 56
No Yes Achromobacter xylosoxidans NBRC 15126 = ATCC 27061   140 107
No Yes Nitrosomonas sp. AL212   47 47
No Yes Sulfuricella denitrificans skB26   19 19
No Yes Caulobacter crescentus CB15   58 54
No Yes Zymomonas mobilis subsp. mobilis ATCC 29191   14 13
No Yes Zymomonas mobilis subsp. mobilis CP4   13 13
No Yes Zymomonas mobilis subsp. mobilis ATCC 10988   13 13
No Yes Zymomonas mobilis subsp. mobilis ZM4   12 12
No Yes Zymomonas mobilis subsp. pomaceae ATCC 29192   18 17
No Yes Phaeobacter gallaeciensis DSM 17395   58 46
No Yes Phaeobacter gallaeciensis DSM 26640   64 53
No Yes Leisingera methylohalidivorans DSM 14336   84 68
No Yes Octadecabacter antarcticus 307   105 102
No Yes Octadecabacter arcticus 238   136 131
No Yes Rhodobacter sphaeroides KD131   62 56
No Yes Rhodobacter sphaeroides ATCC 17025   58 53
No Yes Rhodobacter sphaeroides 2.4.1   49 43
No Yes Paracoccus aminophilus JCM 7686   85 73
No Yes Magnetospirillum gryphiswaldense MSR-1 v2   55 52
No Yes Rhodospirillum rubrum ATCC 11170   62 54
No Yes Gluconacetobacter diazotrophicus PAl 5   82 78
No Yes Gluconobacter oxydans H24   64 53
No Yes Acetobacter pasteurianus 386B   34 31
No Yes Acetobacter pasteurianus IFO 3283-12   67 65
No Yes Acetobacter pasteurianus IFO 3283-01-42C   65 63
No Yes Acetobacter pasteurianus IFO 3283-32   67 65
No Yes Acetobacter pasteurianus IFO 3283-26   67 65
No Yes Acetobacter pasteurianus IFO 3283-22   67 65
No Yes Acetobacter pasteurianus IFO 3283-07   67 65
No Yes Acetobacter pasteurianus IFO 3283-03   67 65
No Yes Micavibrio aeruginosavorus EPB   11 11
No Yes Candidatus Pelagibacter ubique HTCC1062   1 1
No Yes Wolbachia endosymbiont of Drosophila melanogaster   1 1
No Yes Wolbachia endosymbiont of Drosophila simulans wHa   2 2
No Yes Wolbachia endosymbiont of Drosophila simulans wNo   1 1
No Yes Ehrlichia muris AS145   1 1
No Yes Ehrlichia ruminantium str. Welgevonden   1 1
No Yes Ehrlichia ruminantium str. Welgevonden   1 1
No Yes Anaplasma phagocytophilum str. Dog2   1 1
No Yes Anaplasma phagocytophilum str. HZ2   1 1
No Yes Anaplasma phagocytophilum str. JM   1 1
No Yes Anaplasma marginale str. Gypsy Plains   1 1
No Yes Anaplasma marginale str. St. Maries   1 1
No Yes Orientia tsutsugamushi str. Ikeda   35 35
No Yes Rickettsia bellii RML369-C   1 1
No Yes Rickettsia canadensis str. CA410   1 1
No Yes Rickettsia typhi str. B9991CWPP   1 1
No Yes Rickettsia typhi str. TH1527   1 1
No Yes Rickettsia prowazekii str. Breinl   1 1
No Yes Rickettsia prowazekii str. NMRC Madrid E   1 1
No Yes Rickettsia prowazekii str. RpGvF24   1 1
No Yes Rickettsia prowazekii str. GvV257   1 1
No Yes Rickettsia prowazekii str. Dachau   1 1
No Yes Rickettsia prowazekii str. Katsinyian   1 1
No Yes Rickettsia prowazekii str. Chernikova   1 1
No Yes Rickettsia prowazekii Rp22   1 1
No Yes Rickettsia prowazekii str. Madrid E   1 1
No Yes Rickettsia slovaca str. D-CWPP   1 1
No Yes Rickettsia massiliae str. AZT80   2 2
No Yes Rickettsia rickettsii str. Arizona   1 1
No Yes Rickettsia rickettsii str. Brazil   1 1
No Yes Rickettsia rickettsii str. Hauke   1 1
No Yes Rickettsia rickettsii str. Colombia   1 1
No Yes Rickettsia rickettsii str. Hlp#2   1 1
No Yes Rickettsia rickettsii str. Hino   1 1
No Yes Rickettsia rickettsii str. Iowa   1 1
No Yes Methylobacterium extorquens DM4   68 59
No Yes Methylobacterium extorquens PA1   54 48
No Yes Brucella ceti TE10759-12   30 27
No Yes Brucella ceti TE28753-12   24 22
No Yes Brucella canis HSK A52141   33 30
No Yes Brucella suis VBI22   33 30
No Yes Brucella suis 1330   34 31
No Yes Brucella suis 1330   34 31
No Yes Brucella melitensis NI   35 32
No Yes Brucella melitensis M5-90   31 28
No Yes Brucella melitensis M28   32 29
No Yes Brucella melitensis bv. 1 str. 16M   36 33
No Yes Brucella abortus A13334   31 28
No Yes Brucella melitensis biovar Abortus 2308   31 29
No Yes Brucella abortus bv. 1 str. 9-941   32 30
No Yes Sinorhizobium fredii USDA 257   138 109
No Yes Sinorhizobium fredii HH103   151 122
No Yes Sinorhizobium meliloti 2011   101 78
No Yes Sinorhizobium meliloti GR4   161 127
No Yes Sinorhizobium meliloti Rm41   139 109
No Yes Sinorhizobium meliloti SM11   152 121
No Yes Sinorhizobium meliloti BL225C   139 106
No Yes Sinorhizobium meliloti 1021   146 115
No Yes Rhizobium etli CFN 42   135 109
No Yes Rhizobium etli bv. mimosae str. Mim1   135 104
No Yes Rhizobium tropici CIAT 899   172 144
No Yes Rhizobium leguminosarum bv. trifolii WSM2304   148 116
No Yes Rhizobium leguminosarum bv. trifolii WSM1325   178 135
No Yes Liberibacter crescens BT-1   2 2
No Yes Candidatus Liberibacter solanacearum CLso-ZC1   2 2
No Yes Candidatus Liberibacter americanus str. Sao Paulo   2 2
No Yes Candidatus Liberibacter asiaticus str. gxpsy   1 1
No Yes Mesorhizobium australicum WSM2073   101 81
No Yes Hyphomicrobium nitrativorans NL23   26 21
No Yes Hyphomicrobium denitrificans 1NES1   23 22
No Yes Oligotropha carboxidovorans OM5   23 22
No Yes Oligotropha carboxidovorans OM5   23 22
No Yes Rhodopseudomonas palustris DX-1   82 73
No Yes Rhodopseudomonas palustris TIE-1   95 81
No Yes Rhodopseudomonas palustris HaA2   65 53
No Yes Rhodopseudomonas palustris BisB5   48 45
No Yes Rhodopseudomonas palustris BisB18   69 64
No Yes Rhodopseudomonas palustris CGA009   95 83
No Yes Bradyrhizobium sp. S23321   126 110
No Yes Bradyrhizobium sp. BTAi1   120 110
No Yes Bradyrhizobium oligotrophicum S58   115 99
No Yes Bradyrhizobium japonicum USDA 6   177 148
No Yes Bartonella australis Aust/NH1   2 2
No Yes Bartonella vinsonii subsp. berkhoffii str. Winnie   4 3
No Yes Bartonella quintana RM-11   2 2
No Yes Simiduia agarivorans SA1 = DSM 21679   52 47
No Yes Mannheimia succiniciproducens MBEL55E   30 25
No Yes Bibersteinia trehalosi USDA-ARS-USMARC-192   28 22
No Yes Aggregatibacter actinomycetemcomitans ANH9381   18 17
No Yes Aggregatibacter actinomycetemcomitans D11S-1   19 16
No Yes Haemophilus somnus 2336   15 14
No Yes Mannheimia haemolytica USMARC_2286   45 40
No Yes Mannheimia haemolytica M42548   50 45
No Yes Mannheimia haemolytica D174   33 27
No Yes Mannheimia haemolytica D171   41 37
No Yes Mannheimia haemolytica D153   42 37
No Yes Mannheimia haemolytica USDA-ARS-USMARC-183   46 41
No Yes Mannheimia haemolytica USDA-ARS-USMARC-185   41 36
No Yes Pasteurella multocida 36950   12 12
No Yes Pasteurella multocida subsp. multocida str. HN06   10 10
No Yes Pasteurella multocida subsp. multocida str. Pm70   9 9
No Yes Haemophilus parasuis ZJ0906   13 13
No Yes Haemophilus influenzae KR494   10 9
No Yes Haemophilus influenzae F3047   10 8
No Yes Haemophilus influenzae F3031   12 10
No Yes Haemophilus influenzae 10810   14 13
No Yes Haemophilus influenzae PittGG   11 10
No Yes Haemophilus influenzae 86-028NP   12 11
No Yes Haemophilus influenzae R2866   12 11
No Yes Haemophilus influenzae R2846   9 8
No Yes Haemophilus influenzae Rd KW20   15 12
No Yes Actinobacillus suis H91-0380   22 17
No Yes Actinobacillus pleuropneumoniae serovar 3 str. JL03   29 21
No Yes Actinobacillus pleuropneumoniae serovar 7 str. AP76   40 34
No Yes Aeromonas hydrophila ML09-119   79 65
No Yes Vibrio fischeri ES114   60 50
No Yes Vibrio sp. EJY3   109 86
No Yes Vibrio parahaemolyticus BB22OP   84 69
No Yes Vibrio alginolyticus NBRC 15630 = ATCC 17749   95 79
No Yes Vibrio anguillarum Listonella anguillarum M3   53 45
No Yes Vibrio nigripulchritudo VibrioScope   141 112
No Yes Vibrio vulnificus CMCP6   90 74
No Yes Vibrio vulnificus YJ016   102 85
No Yes Vibrio cholerae LMA3984-4   52 45
No Yes Vibrio cholerae M66-2   58 51
No Yes Vibrio cholerae O395   68 59
No Yes Vibrio cholerae IEC224   62 55
No Yes Vibrio cholerae O1 str. 2010EL-1786   63 56
No Yes Vibrio cholerae MJ-1236   61 54
No Yes Vibrio cholerae O1 biovar El Tor str. N16961   61 54
No Yes Idiomarina loihiensis GSL 199   26 26
No Yes Shewanella sp. W3-18-1   58 54
No Yes Shewanella sp. ANA-3   75 66
No Yes Shewanella baltica BA175   67 60
No Yes Shewanella baltica OS678   82 76
No Yes Shewanella baltica OS117   108 101
No Yes Shewanella baltica OS223   60 54
No Yes Shewanella baltica OS195   87 81
No Yes Shewanella baltica OS155   109 102
No Yes Shewanella sp. MR-7   63 58
No Yes Shewanella putrefaciens 200   65 60
No Yes Glaciecola psychrophila 170   82 72
No Yes Alteromonas macleodii str. 'Ionian Sea UM4b'   39 36
No Yes Alteromonas macleodii str. 'Ionian Sea UM7'   46 43
No Yes Alteromonas macleodii str. 'Ionian Sea U8'   38 35
No Yes Alteromonas macleodii str. 'Ionian Sea U7'   37 34
No Yes Alteromonas macleodii str. 'Ionian Sea U4'   41 38
No Yes Alteromonas macleodii str. 'Aegean Sea MED64'   44 40
No Yes Alteromonas macleodii str. 'English Channel 615'   39 35
No Yes Alteromonas macleodii AltDE1   47 44
No Yes Alteromonas macleodii str. 'English Channel 673'   39 35
No Yes Alteromonas macleodii str. 'Balearic Sea AD45'   39 34
No Yes Alteromonas macleodii str. 'Black Sea 11'   41 38
No Yes Alteromonas macleodii ATCC 27126   44 38
No Yes Alcanivorax dieselolei B5   126 109
No Yes Thalassolituus oleivorans MIL-1   66 63
No Yes Stenotrophomonas maltophilia D457   81 66
No Yes Stenotrophomonas maltophilia JV3   79 65
No Yes Stenotrophomonas maltophilia R551-3   103 83
No Yes Xylella fastidiosa subsp. fastidiosa GB514   7 6
No Yes Xylella fastidiosa M12   9 8
No Yes Xylella fastidiosa Temecula1   7 6
No Yes Xylella fastidiosa 9a5c   11 10
No Yes Xanthomonas citri subsp. citri Aw12879   95 87
No Yes Xanthomonas campestris pv. vesicatoria str. 85-10   104 95
No Yes Xanthomonas axonopodis pv. citrumelo F1   66 59
No Yes Xanthomonas axonopodis Xac29-1   76 69
No Yes Xanthomonas oryzae pv. oryzicola BLS256   68 66
No Yes Xanthomonas oryzae pv. oryzae MAFF 311018   93 91
No Yes Xanthomonas oryzae pv. oryzae KACC 10331   84 82
No Yes Xanthomonas campestris pv. raphani 756C   64 57
No Yes Xanthomonas campestris pv. campestris str. 8004   75 67
No Yes Xanthomonas campestris pv. campestris str. ATCC 33913   77 69
No Yes Spiribacter salinus M19-40   9 8
No Yes Thioalkalivibrio nitratireducens DSM 14787   40 34
No Yes Thioflavicoccus mobilis 8321   49 48
No Yes Coxiella burnetii CbuK_Q154   2 2
No Yes Coxiella burnetii CbuG_Q212   2 2
No Yes Coxiella burnetii RSA 331   2 2
No Yes Coxiella burnetii RSA 493   2 2
No Yes Legionella pneumophila str. Paris   16 15
No Yes Legionella pneumophila str. Lens   27 26
No Yes Legionella pneumophila subsp. pneumophila LPE509   18 16
No Yes Legionella pneumophila subsp. pneumophila str. Thunder Bay   21 19
No Yes Legionella pneumophila subsp. pneumophila str. Philadelphia 1   20 18
No Yes Legionella pneumophila subsp. pneumophila   20 18
No Yes Legionella pneumophila subsp. pneumophila   20 19
No Yes Legionella pneumophila subsp. pneumophila ATCC 43290   17 15
No Yes Legionella pneumophila 2300/99 Alcoy   16 15
No Yes Proteus mirabilis BB2000   56 48
No Yes Morganella morganii subsp. morganii KT   68 57
No Yes Edwardsiella tarda C07-087   50 42
No Yes Edwardsiella tarda FL6-60   50 41
No Yes Rahnella aquatilis HX2   112 86
No Yes Yersinia pseudotuberculosis PB1/+   65 57
No Yes Yersinia pseudotuberculosis YPIII   53 44
No Yes Yersinia pseudotuberculosis IP 32953   66 57
No Yes Yersinia pestis biovar Microtus str. 91001   96 88
No Yes Yersinia pestis A1122   102 93
No Yes Yersinia pestis Z176003   87 79
No Yes Yersinia pestis D182038   91 82
No Yes Yersinia pestis D106004   89 80
No Yes Yersinia pestis biovar Medievalis str. Harbin 35   96 87
No Yes Yersinia pestis Nepal516   90 82
No Yes Yersinia pestis Antiqua   141 132
No Yes Yersinia pestis Angola   103 97
No Yes Yersinia pestis CO92   107 98
No Yes Yersinia pestis KIM10+   93 84
No Yes Yersinia enterocolitica subsp. palearctica 105.5R(r)   55 47
No Yes Yersinia enterocolitica subsp. palearctica Y11   59 51
No Yes Serratia sp. AS13   127 98
No Yes Serratia plymuthica S13   132 102
No Yes Serratia plymuthica 4Rx13   125 97
No Yes Serratia marcescens FGI94   103 80
No Yes Serratia marcescens WW4   90 71
No Yes Serratia liquefaciens ATCC 27592   98 78
No Yes Dickeya dadantii Ech586   77 62
No Yes Dickeya dadantii 3937   81 63
No Yes Pectobacterium carotovorum subsp. carotovorum PCC21   86 64
No Yes Pantoea ananatis LMG 5342   82 65
No Yes Pantoea ananatis PA13   81 64
No Yes Pantoea ananatis AJ13355   76 60
No Yes Buchnera aphidicola str. Ak (Acyrthosiphon kondoi)   1 1
No Yes Buchnera aphidicola str. Ua (Uroleucon ambrosiae)   1 1
No Yes Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)   1 1
No Yes Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)   1 1
No Yes Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)   1 1
No Yes Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)   1 1
No Yes Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)   1 1
No Yes Buchnera aphidicola str. 5A (Acyrthosiphon pisum)   1 1
No Yes Buchnera aphidicola str. APS (Acyrthosiphon pisum)   1 1
No Yes Buchnera aphidicola str. Sg (Schizaphis graminum)   1 1
No Yes Erwinia pyrifoliae DSM 12163   81 75
No Yes Erwinia amylovora CFBP1430   43 37
No Yes Candidatus Moranella endobia PCVAL   1 1
No Yes Cronobacter sakazakii CMCC 45402   69 54
No Yes Cronobacter sakazakii SP291   79 62
No Yes Cronobacter sakazakii ATCC BAA-894   66 52
No Yes secondary endosymbiont of Heteropsylla cubana Thao2000   1 1
No Yes Raoultella ornithinolytica B6   135 101
No Yes Shigella sonnei 53G   198 187
No Yes Shigella flexneri 2002017   161 149
No Yes Shigella flexneri 2a str. 2457T   162 151
No Yes Shigella flexneri 2a str. 301   193 183
No Yes Shigella dysenteriae 1617   121 110
No Yes Shigella boydii Sb227   166 155
No Yes Salmonella bongori N268-08   72 60
No Yes Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980   97 80
No Yes Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. 08-1736   77 62
No Yes Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992   81 64
No Yes Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633   81 65
No Yes Salmonella enterica subsp. enterica Serovar Cubana str. CFSAN002050   88 71
No Yes Salmonella enterica subsp. enterica serovar Enteritidis str. P125109   80 65
No Yes Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67   83 68
No Yes Salmonella enterica subsp. enterica serovar Newport str. USMARC-S3124.1   74 59
No Yes Salmonella enterica subsp. enterica serovar Newport str. SL254   74 59
No Yes Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853   78 64
No Yes Salmonella enterica subsp. enterica serovar Typhimurium var. 5- str. CFSAN001921   102 86
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. U288   90 74
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. 798   81 66
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1   84 69
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74   83 68
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. T000240   92 75
No Yes Salmonella enterica The genome of subsp. enterica serovar Typhimurium str. DT2   81 66
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. D23580   81 66
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344   81 66
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S   83 68
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. LT2   84 68
No Yes Salmonella enterica subsp. enterica serovar Typhimurium Definitive Type 104   88 72
No Yes Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12   84 69
No Yes Salmonella enterica subsp. enterica serovar Typhi str. Ty21a   80 66
No Yes Salmonella enterica subsp. enterica serovar Typhi str. CT18   75 61
No Yes Salmonella enterica subsp. enterica serovar Typhi str. Ty2   72 58
No Yes Salmonella enterica serovar Bovismorbificans genomics   77 62
No Yes Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000189   75 59
No Yes Salmonella enterica subsp. enterica serovar Agona str. 24249   83 66
No Yes Salmonella enterica subsp. enterica serovar Agona str. SL483   77 61
No Yes Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1   83 67
No Yes Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7   80 64
No Yes Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601   74 59
No Yes Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150   77 62
No Yes Salmonella enterica subsp. enterica Serovar Heidelberg str. CFSAN002069   81 66
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. B182   80 66
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. 41578   87 72
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. SL476   79 66
No Yes Salmonella enterica subsp. enterica serovar Pullorum str. S06004   68 57
No Yes Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. CDC1983-67   73 61
No Yes Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. RKS5078   73 61
No Yes Salmonella enterica subsp. enterica serovar Thompson str. RM6836   79 63
No Yes Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91   69 57
No Yes Klebsiella oxytoca KCTC 1686   135 106
No Yes Klebsiella pneumoniae JM45   132 106
No Yes Klebsiella pneumoniae CG43   129 98
No Yes Klebsiella pneumoniae KCTC 2242   139 111
No Yes Klebsiella pneumoniae 342   148 113
No Yes Klebsiella pneumoniae subsp. pneumoniae 1084   119 95
No Yes Klebsiella pneumoniae subsp. pneumoniae HS11286   130 104
No Yes Klebsiella pneumoniae subsp. pneumoniae MGH 78578   135 107
No Yes Klebsiella pneumoniae subsp. rhinoscleromatis SB3432   173 152
No Yes Enterobacter aerogenes EA1509E   106 81
No Yes Escherichia coli E24377A   114 98
No Yes Escherichia coli E. coli PMV-1   74 61
No Yes Escherichia coli JJ1886   104 92
No Yes Escherichia coli LY180   81 67
No Yes Escherichia coli APEC O78   92 79
No Yes Escherichia coli O7:K1 str. CE10   137 123
No Yes Escherichia coli O104:H4 str. 2009EL-2050   101 87
No Yes Escherichia coli O104:H4 str. 2009EL-2071   101 87
No Yes Escherichia coli O104:H4 str. 2011C-3493   98 84
No Yes Escherichia coli NA114   84 72
No Yes Escherichia coli P12b   96 83
No Yes Escherichia coli str. 'clone D i2'   87 74
No Yes Escherichia coli str. 'clone D i14'   87 74
No Yes Escherichia coli UM146   84 71
No Yes Escherichia coli 042   98 86
No Yes Escherichia coli Xuzhou21   108 92
No Yes Escherichia coli IHE3034   76 63
No Yes Escherichia coli UMNK88   104 89
No Yes Escherichia coli O83:H1 str. NRG 857C   82 67
No Yes Escherichia coli ABU 83972   99 85
No Yes Escherichia coli KO11FL   87 71
No Yes Escherichia coli KO11FL   87 71
No Yes Escherichia coli LF82   77 63
No Yes Escherichia coli ED1a   92 78
No Yes Escherichia coli IAI39   151 137
No Yes Escherichia coli UMN026   101 86
No Yes Escherichia coli 55989   95 81
No Yes Escherichia coli S88   86 73
No Yes Escherichia coli IAI1   74 61
No Yes Escherichia coli W   85 70
No Yes Escherichia coli W   85 70
No Yes Escherichia coli DH1   87 74
No Yes Escherichia coli DH1   87 74
No Yes Escherichia coli ATCC 8739   83 70
No Yes Escherichia coli BL21(DE3)   87 73
No Yes Escherichia coli BL21(DE3)   87 73
No Yes Escherichia coli SMS-3-5   96 83
No Yes Escherichia coli SE15   89 77
No Yes Escherichia coli SE11   96 78
No Yes Escherichia coli APEC O1   93 80
No Yes Escherichia coli O103:H2 str. 12009   111 99
No Yes Escherichia coli UTI89   87 74
No Yes Escherichia coli 536   105 92
No Yes Escherichia coli HS   80 69
No Yes Escherichia coli ETEC H10407   120 108
No Yes Escherichia coli O55:H7 str. RM12579   93 76
No Yes Escherichia coli O55:H7 str. CB9615   93 77
No Yes Escherichia coli O26:H11 str. 11368   111 99
No Yes Escherichia coli CFT073   103 89
No Yes Escherichia coli O111:H- str. 11128   128 115
No Yes Escherichia coli O127:H6 str. E2348/69   97 83
No Yes Escherichia coli O157:H7 str. TW14359   124 108
No Yes Escherichia coli O157:H7 str. EC4115   107 92
No Yes Escherichia coli O157:H7 str. Sakai   118 102
No Yes Escherichia coli O157:H7 str. EDL933   116 100
No Yes Escherichia coli str. K-12 substr. MDS42   63 52
No Yes Escherichia coli BW2952   81 69
No Yes Escherichia coli str. K-12 substr. MG1655   83 71
No Yes Escherichia coli str. K-12 substr. W3110   93 80
No Yes Escherichia coli str. K-12 substr. DH10B   87 75
No Yes Escherichia coli B str. REL606   87 73
No Yes Enterobacter cloacae SCF1   98 78
No Yes Enterobacter cloacae EcWSU1   101 79
No Yes Enterobacter cloacae subsp. cloacae ENHKU01   84 66
No Yes Enterobacter cloacae subsp. cloacae NCTC 9394   74 58
No Yes Enterobacter cloacae subsp. cloacae ATCC 13047   134 118
No Yes Azotobacter vinelandii CA6   103 92
No Yes Azotobacter vinelandii CA   104 93
No Yes Pseudomonas denitrificans ATCC 13867   136 114
No Yes Pseudomonas syringae pv. phaseolicola 1448A   108 93
No Yes Pseudomonas syringae pv. syringae B728a   101 89
No Yes Pseudomonas stutzeri CCUG 29243   68 58
No Yes Pseudomonas stutzeri DSM 10701   66 54
No Yes Pseudomonas stutzeri DSM 4166   75 62
No Yes Pseudomonas stutzeri RCH2   75 62
No Yes Pseudomonas stutzeri ATCC 17588 = LMG 11199   77 65
No Yes Pseudomonas monteilii SB3101   130 102
No Yes Pseudomonas monteilii SB3078   133 105
No Yes Pseudomonas putida H8234   121 101
No Yes Pseudomonas putida HB3267   127 99
No Yes Pseudomonas putida NBRC 14164   118 97
No Yes Pseudomonas putida DOT-T1E   122 98
No Yes Pseudomonas putida S16   138 104
No Yes Pseudomonas putida BIRD-1   120 99
No Yes Pseudomonas putida W619   121 94
No Yes Pseudomonas putida ND6   139 112
No Yes Pseudomonas putida KT2440   127 104
No Yes Pseudomonas putida GB-1   126 104
No Yes Pseudomonas protegens CHA0   158 134
No Yes Pseudomonas poae RE*1-1-14   108 86
No Yes Pseudomonas fluorescens F113   175 138
No Yes Pseudomonas fluorescens A506   139 110
No Yes Pseudomonas fluorescens R124   124 100
No Yes Pseudomonas fluorescens Pf0-1   145 117
No Yes Pseudomonas resinovorans NBRC 106553   178 148
No Yes Pseudomonas mendocina NK-01   135 107
No Yes Pseudomonas aeruginosa SCV20265   171 141
No Yes Pseudomonas aeruginosa MTB-1   159 129
No Yes Pseudomonas aeruginosa LES431   161 132
No Yes Pseudomonas aeruginosa RP73   159 131
No Yes Pseudomonas aeruginosa B136-33   163 134
No Yes Pseudomonas aeruginosa PA1R   159 129
No Yes Pseudomonas aeruginosa PA1   167 136
No Yes Pseudomonas aeruginosa DK2   162 135
No Yes Pseudomonas aeruginosa NCGM2.S1   174 145
No Yes Pseudomonas aeruginosa M18   156 127
No Yes Pseudomonas aeruginosa LESB58   158 130
No Yes Pseudomonas aeruginosa PA7   166 135
No Yes Pseudomonas aeruginosa PAO1   159 131
No Yes Acinetobacter genomosp. 13TU RUH2624   92 85
No Yes Acinetobacter sp. SH024   91 82
No Yes Acinetobacter calcoaceticus ruh2202   114 99
No Yes Acinetobacter baumannii ZW85-1   93 83
No Yes Acinetobacter baumannii TYTH-1   91 81
No Yes Acinetobacter baumannii BJAB0868   92 81
No Yes Acinetobacter baumannii BJAB0715   96 85
No Yes Acinetobacter baumannii BJAB07104   95 84
No Yes Acinetobacter baumannii TCDC-AB0715   98 87
No Yes Acinetobacter baumannii D1279779   83 74
No Yes Acinetobacter baumannii MDR-TJ   100 89
No Yes Acinetobacter baumannii 1656-2   91 80
No Yes Acinetobacter baumannii ATCC 19606   91 80
No Yes Acinetobacter baumannii AB307-0294   86 77
No Yes Acinetobacter baumannii AYE   91 81
No Yes Acinetobacter baumannii SDF   45 42
No Yes Acinetobacter baumannii MDR-ZJ06   92 81
No Yes Acinetobacter baumannii AB0057   87 78
No Yes Acinetobacter baumannii ACICU   95 84
No Yes Acinetobacter radioresistens SH164   35 34
No Yes Acinetobacter junii SH205   59 52
No Yes Acinetobacter johnsonii SH046   63 59
No Yes Acinetobacter lwoffii SH145   38 36
No Yes Methylophaga sp. JAM7   26 21
No Yes Cycloclasticus zancles 7-ME   26 26
No Yes Francisella tularensis subsp. mediasiatica FSC147   1 1
No Yes Francisella tularensis subsp. holarctica F92   58 58
No Yes Francisella tularensis subsp. holarctica FTNF002-00   58 58
No Yes Francisella tularensis subsp. holarctica OSU18   39 39
No Yes Francisella tularensis subsp. holarctica LVS   59 59
No Yes Francisella tularensis subsp. holarctica FSC200   1 1
No Yes Francisella tularensis subsp. tularensis TIGB03   1 1
No Yes Francisella tularensis subsp. tularensis TI0902   1 1
No Yes Francisella tularensis subsp. tularensis NE061598   50 50
No Yes Francisella tularensis subsp. tularensis FSC198   47 47
No Yes Francisella tularensis subsp. tularensis SCHU S4   47 47
No Yes Francisella cf. novicida Fx1   2 2
No Yes Candidatus Nitrososphaera gargensis Ga9.2   6 6
No Yes Sulfolobus islandicus LAL14/1   4 4
No Yes Sulfolobus islandicus REY15A   8 8
No Yes Sulfolobus islandicus HVE10/4   9 9
No Yes Sulfolobus islandicus Y.G.57.14   22 22
No Yes Sulfolobus islandicus L.S.2.15   7 7
No Yes Sulfolobus islandicus M.16.27   5 5
No Yes Sulfolobus islandicus M.14.25   9 9
No Yes Sulfolobus islandicus M.16.4   7 7
No Yes Sulfolobus islandicus L.D.8.5   10 10
No Yes Sulfolobus solfataricus 98/2   17 17
No Yes Sulfolobus acidocaldarius SUSAZ   2 2
No Yes Sulfolobus acidocaldarius Ron12/I   2 2
No Yes Sulfolobus acidocaldarius N8   2 2
No Yes Methanomethylovorans hollandica DSM 15978   8 8
No Yes Methanolobus psychrophilus R15   21 21
No Yes Methanosarcina mazei Tuc01   4 4
No Yes Methanoregula formicica Methanoregula formicicum SMSP   6 6
No Yes Archaeoglobus sulfaticallidus PM70-1   6 6
No Yes Thermococcus sp. AM4   2 2
No Yes Thermococcus sp. CL1   1 1
No Yes Thermococcus litoralis DSM 5473   2 2
No Yes Pyrococcus sp. NA2   1 1
No Yes Pyrococcus furiosus DSM 3638   12 12
No Yes Candidatus Methanomethylophilus alvus Mx1201   4 4
No Yes Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1   4 4
No Yes Ferroplasma acidarmanus fer1   11 11
No Yes Halovivax ruber XH-70   5 5
No Yes Natrinema pellirubrum DSM 15624   18 18
No Yes Natronococcus occultus SP4   5 5
No Yes Natronobacterium gregoryi SP2   17 17
No Yes Haloquadratum walsbyi C23   9 9
No Yes Halorhabdus tiamatea SARL4B   12 12
No Yes Natronomonas moolapensis 8.8.11   14 14
No Yes Haloarcula hispanica N601   8 8
No Yes Methanococcus maripaludis X1   5 5
No Yes Methanococcus maripaludis C6   4 4
No Yes Methanococcus maripaludis C7   5 5
No Yes Methanococcus maripaludis S2   6 6
No Yes Methanobacterium sp. SWAN-1   7 6
No Yes Homo sapiens 75_37 (old version GRC) Human 1140 910
No Yes Homo sapiens (NCBI version) Human 571 457
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 386 324
No Yes Heliconius numata (Incomplete)   19 17
No Yes Loa loa v3.3 (Request) Eye worm 112 98
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 105 94
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 100 87
No Yes Moniliophthora perniciosa FA553 (Genome survey)   15 12
No Yes Encephalitozoon intestinalis (endoparasite)   25 21
No Yes Encephalitozoon cuniculi (endoparasite)   26 21
No Yes Picea sitchensis (Incomplete) Sitka spruce 31 31
No Yes Lotus japonicus (Early assembly)   351 335
No Yes Malus x domestica (Duplicate) Apple 754 710
No Yes Ricinus communis (Early assembly) Castor bean 393 355
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   786 720
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 465 436
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 471 441
No Yes Phoenix dactylifera (Early draft) Date palm 228 218
No Yes Guillardia theta (nucleomorph)   2 1
No Yes Acholeplasma laidlawii PG-8A (duplicate)   6 6
No Yes Mycobacterium tuberculosis H37Rv (Duplicate of ex)   80 78
No Yes Vibrio campbellii ATCC BAA-1116 (Duplicate of NC)   153 142
No Yes Homo sapiens 69_37 Human 406 330
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 321 266
No Yes Gorilla gorilla 69_3.1 Western gorilla 350 288
No Yes Pongo abelii 69_2 Sumatran orangutan 324 270
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 307 253
No Yes Macaca mulatta 69_1 Rhesus monkey 334 277
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 329 273
No Yes Otolemur garnettii 69_3 Small-eared galago 338 280
No Yes Microcebus murinus 69_1 Gray mouse lemur 253 220
No Yes Rattus norvegicus 69_3.4 Norway rat 342 283
No Yes Mus musculus 69_38 House mouse 389 327
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 217 188
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 313 265
No Yes Cavia porcellus 69_3 Domestic guinea pig 308 261
No Yes Oryctolagus cuniculus 69_2 Rabbit 287 241
No Yes Ochotona princeps 69 American pika 231 200
No Yes Tupaia belangeri 69 Northern tree shrew 183 160
No Yes Sus scrofa 69_10.2 Pig 298 260
No Yes Bos taurus 69_3.1 Cattle 320 268
No Yes Vicugna pacos 69_1 Alpaca 110 92
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 279 232
No Yes Mustela putorius furo 69_1.0 Domestic ferret 312 262
No Yes Ailuropoda melanoleuca 69_1 Giant panda 330 274
No Yes Canis familiaris 69_3.1 Dog 340 286
No Yes Felis catus 69 Domestic cat 181 157
No Yes Equus caballus 69_2 Horse 310 260
No Yes Myotis lucifugus 69_2.0 Little brown bat 292 246
No Yes Pteropus vampyrus 69_1 Large flying fox 266 228
No Yes Sorex araneus 69_1 European shrew 158 123
No Yes Erinaceus europaeus 69 Western European hedgehog 188 154
No Yes Procavia capensis 69_1 Cape rock hyrax 258 215
No Yes Loxodonta africana 69_3 African savanna elephant 315 263
No Yes Echinops telfairi 69 Small Madagascar hedgehog 275 209
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 183 159
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 164 137
No Yes Macropus eugenii 69_1.0 Tammar wallaby 232 207
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 303 257
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 320 270
No Yes Ornithorhynchus anatinus 69_5 Platypus 239 205
No Yes Petromyzon marinus 69_7.0 Sea lamprey 145 113
No Yes Meleagris gallopavo 69_2 Turkey 193 160
No Yes Gallus gallus 69_2 Chicken 230 191
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 260 220
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 415 337
No Yes Anolis carolinensis 69_2.0 Green anole 305 257
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 339 289
No Yes Latimeria chalumnae 69_1 Coelacanth 461 372
No Yes Gadus morhua 69_1 Atlantic cod 370 324
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 379 334
No Yes Takifugu rubripes 69_4 Torafugu 399 335
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 364 320
No Yes Oryzias latipes 69_1 Japanese medaka 382 338
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 362 311
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 426 370
No Yes Danio rerio 69_9 Zebrafish 445 385
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 106 98
No Yes Ciona intestinalis 69 Vase tunicate 124 108
No Yes Drosophila melanogaster 69_5 Fruit fly 164 140
No Yes Caenorhabditis elegans 69_215 Roundworm 159 132
No Yes Saccharomyces cerevisiae 69_4 Baker's yeast 39 31
No Yes Arabidopsis thaliana 10 Thale cress 435 402
No Yes 1_050719N (meta-genome)   104 100
No Yes 1_Upper_euphotic (meta-genome)   14 13
No Yes 2_050719S (meta-genome)   143 131
No Yes 2_Base_of_chrolophyll_max (meta-genome)   6 5
No Yes 3_050719R (meta-genome)   158 149
No Yes 3_Below_base_of_euphotic (meta-genome)   4 4
No Yes 4_050719Q (meta-genome)   348 326
No Yes 4_Deep_abyss (meta-genome)   50 47
No Yes 5_050719P (meta-genome)   279 256
No Yes 5_Below_upper_mesopelagic (meta-genome)   18 16
No Yes 6_Upper_euphotic (meta-genome)   16 14
No Yes 7_Oxygen_minimum_layer (meta-genome)   13 13
No Yes Activated sludge plasmid pool Morges-2009 (Newbler) (meta-genome)   130 130
No Yes Activated sludge plasmid pool Visp-2009 (Newbler) (meta-genome)   164 157
No Yes Air microbial communities Singapore indoor air filters 1 (meta-genome)   238 216
No Yes Air microbial communities Singapore indoor air filters 2 (meta-genome)   296 270
No Yes Anaerobic methane oxidation (AOM) community from Eel River Basin sediment, California (meta-genome)   13 13
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   624 489
No Yes Bath Hot Springs, filamentous community (meta-genome)   15 15
No Yes Bath Hot Springs, planktonic community (meta-genome)   50 50
No Yes Combined (meta-genome)   1768 1499
No Yes Crater Hills (meta-genome)   12 11
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   1638 1360
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)   491 425
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   526 432
No Yes Dump bottom (Dump bottom) (meta-genome)   2052 1949
No Yes Dump top (Dump top) (meta-genome)   1534 1449
No Yes Endophytic microbiome from Rice (meta-genome)   367 311
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #1 (meta-genome)   286 253
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome)   215 203
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #3 (meta-genome)   224 198
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   254 248
No Yes Fungus garden combined (combined) (meta-genome)   956 789
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   1413 1200
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   1724 1466
No Yes Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes   217 201
No Yes Guerrero Negro salt ponds hypersaline mat 01(G) (meta-genome)   56 49
No Yes Guerrero Negro salt ponds hypersaline mat 02(H) (meta-genome)   71 62
No Yes Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome)   70 64
No Yes Guerrero Negro salt ponds hypersaline mat 04(N) (meta-genome)   58 49
No Yes Guerrero Negro salt ponds hypersaline mat 05(O) (meta-genome)   94 84
No Yes Guerrero Negro salt ponds hypersaline mat 06(P) (meta-genome)   69 62
No Yes Guerrero Negro salt ponds hypersaline mat 07(S) (meta-genome)   79 71
No Yes Guerrero Negro salt ponds hypersaline mat 08(T) (meta-genome)   55 48
No Yes Guerrero Negro salt ponds hypersaline mat 09(Y) (meta-genome)   54 50
No Yes Guerrero Negro salt ponds hypersaline mat 10(Z) (meta-genome)   45 43
No Yes Hindgut microbiome of Nasutitermes sp. (Costa Rica), fosmids (meta-genome)   2 2
No Yes Hindgut microbiome of Nasutitermes sp. (Costa Rica) (meta-genome)   383 327
No Yes Hot Spring microbial communities from Yellowstone Obsidian Hot Spring, Sample 10594 (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP8 from OSP Spring (meta-genome)   30 30
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP1 from Alice Springs, Crater Hills (meta-genome)   3 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP10 from Narrow Gauge (meta-genome)   11 11
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP11 from Octopus Springs (meta-genome)   90 85
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP12 from Calcite Springs, Tower Falls Region (meta-genome)   72 72
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP13 from Bechler Spring (meta-genome)   49 49
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP14 from OSP Spring (meta-genome)   308 308
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   205 203
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome)   216 211
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime (meta-genome)   118 116
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome)   75 74
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP19 from Cistern Spring (meta-genome)   15 15
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome)   138 133
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP3 from Monarch Geyser, Norris Geyser Basin (meta-genome)   8 8
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP4 from Joseph's Coat Springs (meta-genome)   10 10
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome)   137 136
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   241 235
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome)   128 127
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP9 from Dragon Spring, Norris Geyser Basin (meta-genome)   197 197
No Yes Human Gut Community Subject 7 (meta-genome)   161 135
No Yes Human Gut Community Subject 8 (meta-genome)   313 231
No Yes Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)   583 492
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   316 311
No Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome)   242 236
No Yes Marine anammox bioreactor enriched for Scalindua species (meta-genome)   107 103
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   1647 1572
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   415 396
No Yes Methylotrophic community from Lake Washington sediment Formate enrichment (meta-genome)   196 178
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   436 420
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   357 344
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)   264 254
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   447 427
No Yes Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome)   153 151
No Yes Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome)   551 455
No Yes Mouse Gut Community lean1 (meta-genome)   18 16
No Yes Mouse Gut Community lean2 (meta-genome)   14 11
No Yes Mouse Gut Community lean3 (meta-genome)   10 9
No Yes Mouse Gut Community ob1 (meta-genome)   19 16
No Yes Mouse Gut Community ob2 (meta-genome)   13 10
No Yes NCBI 2017_08 genome   6027424 5104640
No Yes Nymph Lake Bulk Water (meta-genome)   3 3
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   761 696
No Yes Olavius algarvensis endosymbiont metagenome Delta1 (meta-genome)   106 106
No Yes Olavius algarvensis endosymbiont metagenome Delta4 (meta-genome)   51 49
No Yes Olavius algarvensis endosymbiont metagenome Gamma1 (meta-genome)   79 79
No Yes Olavius algarvensis endosymbiont metagenome Gamma3 (meta-genome)   127 120
No Yes Protozoadb 2010_08 (Protozoadb)   1797 1511
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   1115 997
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   678 609
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   755 684
No Yes Single-cell genome from subgingival tooth surface TM7a (meta-genome)   2 2
No Yes Sludge/Australian, Phrap Assembly (meta-genome)   226 204
No Yes Sludge/US, Jazz Assembly (meta-genome)   102 96
No Yes Sludge/US, Phrap Assembly (meta-genome)   181 170
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   767 705
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   1522 1463
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   2372 2272
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   1335 1264
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   1566 1499
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   1257 1203
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   1463 1407
No Yes Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)   307 279
No Yes STRING v9.0.5 (STRING)   72221 62859
No Yes Switchgrass field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing switchgr (meta-genome)   116 112
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   1268 1145
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome)   151 148
No Yes Termite Protist Endosymbiont Community (meta-genome)   42 38
No Yes Uniprot 2018_03 genome   1404420 1198814
No Yes Uranium Contaminated Groundwater FW106 (meta-genome)   113 102
No Yes Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)   457 446
No Yes Global Ocean Sampling Expedition (GOS)   11173 10466
No Yes NCBI plasmid sequences (Plasmids)   8037 7269
No Yes NCBI viral sequences (Viral)   221 213
No Yes PDB chains (SCOP 1.75) (PDB)   207 197
No Yes Protein Data Bank (all PDB sequenc)   1758 1698
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   3427 3427
No Yes TargetDB (Targets)   4360 3569
No Yes The Salmonella enterica Pan-genome (meta-genome)   2405 1944
No Yes UniProt viral sequences (Viral)   96 94

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