SUPERFAMILY 1.75 HMM library and genome assignments server

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"Winged helix" DNA-binding domain superfamily domain assignments
in
all archaeal genomes

Assignment details

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25 selected genomes have 1166 significant domains in 1132 proteins.

Showing genomes 1 to 25 of 163
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Nanoarchaeum equitans Kin4-M has 12 significant domains in 12 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|161511236|ref|NP_963481.2|   7.74e-46   2-153   Rps19E-like  
gi|41614852|ref|NP_963350.1|   0.0000000000231   258-322   Helicase DNA-binding domain  
gi|41614895|ref|NP_963393.1|   0.0000000000224   6-95   TrmB-like  
gi|41615022|ref|NP_963520.1|   6.62e-17   4-64   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|41615093|ref|NP_963591.1|   0.000000555   2-48   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|41615146|ref|NP_963644.1|   1.74e-21   3-91   PF0610-like  
gi|41615186|ref|NP_963684.1|   0.00000000000000725   188-261   Methionine aminopeptidase, insert domain  
gi|41615238|ref|NP_963736.1|   0.000000000361   5-81   Transcriptional regulator IclR, N-terminal domain  
gi|41615248|ref|NP_963746.1|   0.00000000000109   2-83   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|41615266|ref|NP_963764.1|   0.0000000000000705   13-86   Transcription factor E/IIe-alpha, N-terminal domain  
gi|41615288|ref|NP_963786.1|   0.0000329   6-98   MarR-like transcriptional regulators  
gi|41615323|ref|NP_963821.1|   0.0000000000000922   10-101   TrmB-like  

Candidatus Caldiarchaeum subterraneum has 52 significant domains in 50 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|557693446|ref|YP_008796500.1|   0.000000000000019   293-390   Helicase DNA-binding domain  
gi|557693474|ref|YP_008796528.1|   0.0000413   34-88   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|557693494|ref|YP_008796548.1|   0.0000000000000131   2-61   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|557693579|ref|YP_008796633.1|   5.33e-22   3-102   PadR-like  
gi|557693591|ref|YP_008796645.1|   0.0000000000000803   14-90   ArsR-like transcriptional regulators  
gi|557693607|ref|YP_008796661.1|   0.00000074   2-82   Transcriptional regulator IclR, N-terminal domain  
gi|557693615|ref|YP_008796669.1|   0.0000000000000218   16-95   PF1790-like  
gi|557693629|ref|YP_008796683.1|   0.000000476   204-270   Methionine aminopeptidase, insert domain  
gi|557693644|ref|YP_008796698.1|   0.000000000165   1-69   PF1790-like  
gi|557693723|ref|YP_008796777.1|   0.00000254   3-66   MarR-like transcriptional regulators  
gi|557693728|ref|YP_008796782.1|   0.0000000000000143   76-143   ScpB/YpuH-like  
  0.000000000000532   2-71   ScpB/YpuH-like  
gi|557693833|ref|YP_008796887.1|   0.0000000000527   10-71   HxlR-like  
gi|557693933|ref|YP_008796987.1|   0.00000063   12-80   Z-DNA binding domain  
gi|557693946|ref|YP_008797000.1|   0.00000000000724   27-87   PH0730 N-terminal domain-like  
gi|557694067|ref|YP_008797121.1|   6.12e-27   35-156   PadR-like  
gi|557694070|ref|YP_008797124.1|   0.000021   42-92   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|557694152|ref|YP_008797206.1|   0.0000106   84-145   ArsR-like transcriptional regulators  
gi|557694156|ref|YP_008797210.1|   0.00000412   33-96   PH0730 N-terminal domain-like  
gi|557694163|ref|YP_008797217.1|   3.26e-23   310-413   Helicase DNA-binding domain  
gi|557694180|ref|YP_008797234.1|   0.0000000000405   60-126   Archaeal DNA-binding protein  
gi|557694206|ref|YP_008797260.1|   0.0000000000769   220-284   MarR-like transcriptional regulators  
gi|557694219|ref|YP_008797273.1|   2.62e-47   5-138   Rps19E-like  
gi|557694235|ref|YP_008797289.1|   0.0000000000000108   15-89   PF1790-like  
gi|557694252|ref|YP_008797306.1|   0.0000083   257-319   HxlR-like  
gi|557694254|ref|YP_008797308.1|   1.39e-26   9-98   ArsR-like transcriptional regulators  
gi|557694278|ref|YP_008797332.1|   3.13e-19   93-189   HxlR-like  
  5.54e-16   17-90   HxlR-like  
gi|557694291|ref|YP_008797345.1|   0.000000082   3-72   F93-like  
gi|557694326|ref|YP_008797380.1|   0.000000000000721   20-104   N-terminal domain of molybdate-dependent transcriptional regulator ModE  
gi|557694342|ref|YP_008797396.1|   0.00000000000469   11-102   TrmB-like  
gi|557694412|ref|YP_008797466.1|   8.44e-27   9-106   HxlR-like  
gi|557694424|ref|YP_008797478.1|   0.0000035   155-213   Transcriptional regulator IclR, N-terminal domain  
gi|557694442|ref|YP_008797496.1|   0.0000114   223-284   Transcriptional regulator IclR, N-terminal domain  
gi|557694495|ref|YP_008797549.1|   2.2e-17   421-505   RecQ helicase DNA-binding domain-like  
gi|557694554|ref|YP_008797608.1|   0.0000000000000329   19-83   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|557694574|ref|YP_008797628.1|   0.000000000133   13-76   HxlR-like  
gi|557694604|ref|YP_008797658.1|   0.0000149   13-63   LexA repressor, N-terminal DNA-binding domain  
gi|557694659|ref|YP_008797713.1|   0.00000216   76-131   CAP C-terminal domain-like  
gi|557694729|ref|YP_008797783.1|   0.0000000000000386   5-59   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|557694755|ref|YP_008797809.1|   0.000000064   12-95   HxlR-like  
gi|557694828|ref|YP_008797882.1|   0.0000023   200-252   TrmB-like  
gi|557694866|ref|YP_008797920.1|   0.000000421   24-98   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|557694895|ref|YP_008797949.1|   0.0000000000000569   4-64   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|557694929|ref|YP_008797983.1|   0.000000000423   8-80   MarR-like transcriptional regulators  
gi|557694948|ref|YP_008798002.1|   0.00000182   96-153   CAP C-terminal domain-like  
gi|557694972|ref|YP_008798026.1|   5.88e-28   11-110   HxlR-like  
gi|557694974|ref|YP_008798028.1|   0.00000000000017   31-145   Iron-dependent repressor protein  
gi|557695054|ref|YP_008798108.1|   0.00000000000000616   2-61   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|557695058|ref|YP_008798112.1|   0.0000000000798   9-83   Archaeal DNA-binding protein  
gi|557695071|ref|YP_008798125.1|   0.00000000000204   25-95   Hypothetical protein PH1932  
gi|557695096|ref|YP_008798150.1|   0.000000000000577   6-87   Transcription factor E/IIe-alpha, N-terminal domain  
 
Weak hits:
gi|557693729|ref|YP_008796783.1|   0.00354   161-216   Rad21/Rec8-like  
gi|557693778|ref|YP_008796832.1|   0.0014   19-128   MarR-like transcriptional regulators  
  0.062   184-225   MarR-like transcriptional regulators  
gi|557693934|ref|YP_008796988.1|   0.000571   291-353   Helicase DNA-binding domain  
gi|557694365|ref|YP_008797419.1|   0.0182   213-245   Rps19E-like  
gi|557694949|ref|YP_008798003.1|   0.00162   99-146   CAP C-terminal domain-like  
gi|557694962|ref|YP_008798016.1|   0.00937   70-130   CAP C-terminal domain-like  
gi|557695052|ref|YP_008798106.1|   0.0476   20-80   DNA-binding protein Mj223  
gi|557695078|ref|YP_008798132.1|   0.000261   48-103   LexA repressor, N-terminal DNA-binding domain  

Cenarchaeum symbiosum A has 39 significant domains in 35 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|118575258|ref|YP_875001.1|   0.000000000824   70-142   ArsR-like transcriptional regulators  
  0.000000342   11-65   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|118575334|ref|YP_875077.1|   0.000000000382   1-58   MarR-like transcriptional regulators  
gi|118575542|ref|YP_875285.1|   0.00000000132   10-71   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|118576015|ref|YP_875758.1|   0.0000000763   7-88   MarR-like transcriptional regulators  
gi|118576078|ref|YP_875821.1|   6.55e-20   19-132   Hypothetical protein PH1932  
gi|118576206|ref|YP_875949.1|   0.0000000000537   3-78   TrmB-like  
gi|118576207|ref|YP_875950.1|   0.00000000000478   17-70   Iron-dependent repressor protein  
gi|118576272|ref|YP_876015.1|   0.00000000289   8-88   Archaeal DNA-binding protein  
gi|118576386|ref|YP_876129.1|   0.000000000000188   2-115   Iron-dependent repressor protein  
gi|118576415|ref|YP_876158.1|   0.000000000000422   203-278   Methionine aminopeptidase, insert domain  
gi|118576449|ref|YP_876192.1|   0.000000501   16-90   PF1790-like  
gi|118576450|ref|YP_876193.1|   0.000000000642   17-87   PF1790-like  
gi|118576453|ref|YP_876196.1|   0.000000115   23-84   PH0730 N-terminal domain-like  
gi|118576457|ref|YP_876200.1|   0.000000000269   252-333   TrmB-like  
gi|118576485|ref|YP_876228.1|   0.00000428   5-68   Lrp/AsnC-like transcriptional regulator N-terminal domain  
  0.0253   178-237   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|118576521|ref|YP_876264.1|   0.0000000509   13-65   Biotin repressor-like  
gi|118576522|ref|YP_876265.1|   0.0000000216   5-90   MarR-like transcriptional regulators  
gi|118576592|ref|YP_876335.1|   0.000000000000019   94-160   ScpB/YpuH-like  
  0.000000786   12-88   ScpB/YpuH-like  
gi|118576642|ref|YP_876385.1|   0.000000000403   24-90   Archaeal DNA-binding protein  
gi|118576687|ref|YP_876430.1|   0.00000000000203   8-68   Lrp/AsnC-like transcriptional regulator N-terminal domain  
  0.0000045   145-204   TrmB-like  
gi|118576765|ref|YP_876508.1|   0.0000122   2-73   TrmB-like  
gi|118576883|ref|YP_876626.1|   6.68e-18   103-191   PadR-like  
gi|118576895|ref|YP_876638.1|   0.000000000000242   419-505   RecQ helicase DNA-binding domain-like  
gi|118576932|ref|YP_876675.1|   3.13e-18   5-87   Transcription factor E/IIe-alpha, N-terminal domain  
gi|118576937|ref|YP_876680.1|   1.53e-44   2-143   Rps19E-like  
gi|118576943|ref|YP_876686.1|   0.000000025   18-148   ArsR-like transcriptional regulators  
gi|118576959|ref|YP_876702.1|   0.0000000000125   59-134   Hypothetical protein PH1932  
  0.0000000132   2-65   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|118576974|ref|YP_876717.1|   0.000000849   124-168   PF1790-like  
gi|118576984|ref|YP_876727.1|   0.00000000000000395   8-68   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|118576994|ref|YP_876737.1|   0.0000000000566   16-85   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|118577006|ref|YP_876749.1|   0.00000000277   150-213   MarR-like transcriptional regulators  
gi|118577010|ref|YP_876753.1|   1.77e-22   311-409   Helicase DNA-binding domain  
gi|118577056|ref|YP_876799.1|   0.000000124   39-107   PF1790-like  
gi|118577057|ref|YP_876800.1|   0.0000000321   255-321   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|118577157|ref|YP_876900.1|   0.0000000000199   4-64   Lrp/AsnC-like transcriptional regulator N-terminal domain  
 
Weak hits:
gi|118575654|ref|YP_875397.1|   0.00464   31-65   CAP C-terminal domain-like  
gi|118575757|ref|YP_875500.1|   0.0252   254-305   MarR-like transcriptional regulators  
gi|118576075|ref|YP_875818.1|   0.000101   23-104   MarR-like transcriptional regulators  
gi|118576307|ref|YP_876050.1|   0.000204   82-167   ArsR-like transcriptional regulators  
gi|118576391|ref|YP_876134.1|   0.0327   1-27   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|118576591|ref|YP_876334.1|   0.0598   171-216   Rad21/Rec8-like  
gi|118577009|ref|YP_876752.1|   0.00245   69-119   Penicillinase repressor  
gi|118577193|ref|YP_876936.1|   0.00798   78-120   DNA-binding protein Mj223  
gi|118577195|ref|YP_876938.1|   0.00557   60-118   F93-like  
gi|118577197|ref|YP_876940.1|   0.0653   51-125   HxlR-like  

Candidatus Nitrosopumilus sp. AR2 has 67 significant domains in 65 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|407463925|ref|YP_006774807.1|   0.00000000000444   17-70   Iron-dependent repressor protein  
gi|407463926|ref|YP_006774808.1|   0.000000000149   4-73   Z-DNA binding domain  
gi|407463978|ref|YP_006774860.1|   0.00000000982   18-86   ArsR-like transcriptional regulators  
gi|407464034|ref|YP_006774916.1|   0.00000000000155   23-92   PF1790-like  
gi|407464097|ref|YP_006774979.1|   0.0000000000022   420-506   RecQ helicase DNA-binding domain-like  
gi|407464109|ref|YP_006774991.1|   4.65e-19   4-88   PadR-like  
gi|407464187|ref|YP_006775069.1|   0.000000136   6-82   Helicase DNA-binding domain  
gi|407464242|ref|YP_006775124.1|   0.000000000895   4-65   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|407464275|ref|YP_006775157.1|   0.0000000000952   14-116   Hypothetical protein PH1932  
gi|407464278|ref|YP_006775160.1|   0.0000000000439   15-144   PadR-like  
gi|407464281|ref|YP_006775163.1|   0.0000438   50-118   ReutB4095-like  
gi|407464291|ref|YP_006775173.1|   1.74e-34   5-135   FUR-like  
gi|407464346|ref|YP_006775228.1|   0.0000000000003   27-111   Hypothetical protein PH1932  
gi|407464357|ref|YP_006775239.1|   7.37e-23   5-82   ArsR-like transcriptional regulators  
gi|407464382|ref|YP_006775264.1|   0.0000454   12-75   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|407464392|ref|YP_006775274.1|   0.0000000000000484   91-157   ScpB/YpuH-like  
  0.00000022   7-85   ScpB/YpuH-like  
gi|407464396|ref|YP_006775278.1|   0.00000000000958   8-68   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|407464438|ref|YP_006775320.1|   0.0000000094   4-112   FUR-like  
gi|407464482|ref|YP_006775364.1|   0.000038   44-111   MarR-like transcriptional regulators  
gi|407464496|ref|YP_006775378.1|   0.0000000000000966   196-271   Methionine aminopeptidase, insert domain  
gi|407464642|ref|YP_006775524.1|   0.00000000000252   20-108   Hypothetical protein PH1932  
gi|407464648|ref|YP_006775530.1|   0.0000000114   9-132   PadR-like  
gi|407464656|ref|YP_006775538.1|   0.0000000000000806   21-99   Hypothetical protein PH1932  
gi|407464670|ref|YP_006775552.1|   0.0000000000000369   1-61   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|407464738|ref|YP_006775620.1|   0.0000000000000352   18-130   Hypothetical protein PH1932  
gi|407464816|ref|YP_006775698.1|   0.000000529   24-90   MarR-like transcriptional regulators  
gi|407464846|ref|YP_006775728.1|   0.00000387   20-96   TrmB-like  
gi|407464847|ref|YP_006775729.1|   0.000000000115   25-95   PF1790-like  
gi|407464850|ref|YP_006775732.1|   0.0000317   36-93   PH0730 N-terminal domain-like  
gi|407464884|ref|YP_006775766.1|   0.00000000253   19-88   MarR-like transcriptional regulators  
gi|407464893|ref|YP_006775775.1|   0.000000000151   260-327   TrmB-like  
gi|407464903|ref|YP_006775785.1|   0.0000308   43-93   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|407464924|ref|YP_006775806.1|   0.00000000179   24-90   MarR-like transcriptional regulators  
gi|407464930|ref|YP_006775812.1|   0.00000000643   19-82   Z-DNA binding domain  
gi|407464962|ref|YP_006775844.1|   0.000000584   16-84   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|407464997|ref|YP_006775879.1|   0.000000193   5-87   MarR-like transcriptional regulators  
gi|407464998|ref|YP_006775880.1|   0.00000000125   14-67   Biotin repressor-like  
gi|407465032|ref|YP_006775914.1|   0.00000089   14-82   PF1790-like  
gi|407465045|ref|YP_006775927.1|   0.0000218   89-179   MarR-like transcriptional regulators  
gi|407465048|ref|YP_006775930.1|   0.00000133   17-85   RPO3F domain-like  
gi|407465094|ref|YP_006775976.1|   7.74e-16   26-83   Iron-dependent repressor protein  
gi|407465130|ref|YP_006776012.1|   0.00000242   10-68   RPO3F domain-like  
gi|407465168|ref|YP_006776050.1|   0.00000000251   24-92   MarR-like transcriptional regulators  
gi|407465186|ref|YP_006776068.1|   0.000000000432   4-79   ArsR-like transcriptional regulators  
gi|407465288|ref|YP_006776170.1|   0.0000000000436   4-57   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|407465296|ref|YP_006776178.1|   0.00000000856   4-84   MarR-like transcriptional regulators  
gi|407465301|ref|YP_006776183.1|   0.000000403   18-86   PF1790-like  
gi|407465309|ref|YP_006776191.1|   0.0000000001   43-108   ArsR-like transcriptional regulators  
gi|407465345|ref|YP_006776227.1|   0.00000699   73-135   MarR-like transcriptional regulators  
gi|407465392|ref|YP_006776274.1|   0.00000034   3-67   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|407465416|ref|YP_006776298.1|   0.000000000152   24-91   F93-like  
gi|407465427|ref|YP_006776309.1|   0.00000000956   11-81   Archaeal DNA-binding protein  
gi|407465464|ref|YP_006776346.1|   0.000000000652   41-109   ArsR-like transcriptional regulators  
gi|407465472|ref|YP_006776354.1|   0.0000000000000327   2-63   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|407465500|ref|YP_006776382.1|   0.00000143   9-109   FaeA-like  
gi|407465558|ref|YP_006776440.1|   0.0000000000198   1-123   Hypothetical protein PH1932  
gi|407465592|ref|YP_006776474.1|   1.16e-18   5-87   Transcription factor E/IIe-alpha, N-terminal domain  
gi|407465608|ref|YP_006776490.1|   6.95e-50   3-149   Rps19E-like  
gi|407465616|ref|YP_006776498.1|   0.000000118   16-90   MarR-like transcriptional regulators  
gi|407465625|ref|YP_006776507.1|   0.0000000402   55-188   ArsR-like transcriptional regulators  
gi|407465676|ref|YP_006776558.1|   0.0000000000498   1-61   Lrp/AsnC-like transcriptional regulator N-terminal domain  
  0.0000000663   140-286   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|407465773|ref|YP_006776655.1|   0.0000000322   131-192   DNA-binding protein Mj223  
gi|407465776|ref|YP_006776658.1|   1.69e-23   300-399   Helicase DNA-binding domain  
gi|407465806|ref|YP_006776688.1|   0.00000000442   16-80   PF1790-like  
gi|407465807|ref|YP_006776689.1|   0.0000019   271-326   Lrp/AsnC-like transcriptional regulator N-terminal domain  
 
Weak hits:
gi|407464574|ref|YP_006775456.1|   0.00174   28-103   Transcription factor E/IIe-alpha, N-terminal domain  
gi|407464617|ref|YP_006775499.1|   0.000133   80-148   Z-DNA binding domain  
gi|407464696|ref|YP_006775578.1|   0.0141   9-82   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|407464712|ref|YP_006775594.1|   0.000762   10-87   HxlR-like  
gi|407464937|ref|YP_006775819.1|   0.0171   114-153   Transcriptional regulator IclR, N-terminal domain  
gi|407465025|ref|YP_006775907.1|   0.00644   111-152   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|407465125|ref|YP_006776007.1|   0.00603   48-93   HxlR-like  
gi|407465131|ref|YP_006776013.1|   0.0635   22-70   DNA-binding protein Mj223  
gi|407465145|ref|YP_006776027.1|   0.000419   23-66   RPO3F domain-like  
gi|407465201|ref|YP_006776083.1|   0.00454   8-90   PadR-like  
gi|407465343|ref|YP_006776225.1|   0.0163   208-262   Iron-dependent repressor protein  
gi|407465491|ref|YP_006776373.1|   0.0836   6-47   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|407465775|ref|YP_006776657.1|   0.00272   61-120   Penicillinase repressor  

Nitrosopumilus maritimus SCM1 has 71 significant domains in 63 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|161527513|ref|YP_001581339.1|   4.42e-24   301-399   Helicase DNA-binding domain  
gi|161527545|ref|YP_001581371.1|   0.00000000126   16-80   PF1790-like  
gi|161527546|ref|YP_001581372.1|   0.000000525   265-319   Z-DNA binding domain  
gi|161527625|ref|YP_001581451.1|   0.00000000000109   18-71   Iron-dependent repressor protein  
gi|161527626|ref|YP_001581452.1|   0.0000000000746   4-74   TrmB-like  
gi|161527710|ref|YP_001581536.1|   0.000000000000291   23-82   PF1790-like  
gi|161527751|ref|YP_001581577.1|   0.000000000000239   420-506   RecQ helicase DNA-binding domain-like  
gi|161527765|ref|YP_001581591.1|   2.58e-19   4-89   PadR-like  
gi|161527834|ref|YP_001581660.1|   0.000000261   6-69   Helicase DNA-binding domain  
gi|161527891|ref|YP_001581717.1|   0.0000000811   2-58   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|161527980|ref|YP_001581806.1|   0.0000000000000031   23-113   Hypothetical protein PH1932  
gi|161527995|ref|YP_001581821.1|   2.81e-21   5-82   ArsR-like transcriptional regulators  
gi|161528020|ref|YP_001581846.1|   0.00000689   4-67   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|161528029|ref|YP_001581855.1|   0.00000000000000359   91-157   ScpB/YpuH-like  
  0.00000139   6-85   ScpB/YpuH-like  
gi|161528093|ref|YP_001581919.1|   0.0000301   45-112   Archaeal DNA-binding protein  
gi|161528109|ref|YP_001581935.1|   0.0000000000000231   196-271   Methionine aminopeptidase, insert domain  
gi|161528213|ref|YP_001582039.1|   0.0000000268   31-93   Z-DNA binding domain  
gi|161528235|ref|YP_001582061.1|   0.00000974   80-179   Hypothetical protein PH1932  
gi|161528246|ref|YP_001582072.1|   0.00000000000000118   3-63   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|161528268|ref|YP_001582094.1|   0.00000038   8-92   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|161528293|ref|YP_001582119.1|   0.0000000000000101   17-147   Hypothetical protein PH1932  
gi|161528332|ref|YP_001582158.1|   0.000000645   8-71   MarR-like transcriptional regulators  
gi|161528384|ref|YP_001582210.1|   0.000000249   16-72   Hypothetical protein PH1932  
gi|161528385|ref|YP_001582211.1|   0.0000000000555   17-87   PF1790-like  
gi|161528388|ref|YP_001582214.1|   0.000000000683   27-90   PH0730 N-terminal domain-like  
gi|161528409|ref|YP_001582235.1|   0.0000963   5-58   Z-DNA binding domain  
gi|161528429|ref|YP_001582255.1|   0.000000000151   260-327   TrmB-like  
gi|161528491|ref|YP_001582317.1|   0.00000000333   7-90   MarR-like transcriptional regulators  
gi|161528492|ref|YP_001582318.1|   0.00000000469   14-67   Biotin repressor-like  
gi|161528522|ref|YP_001582348.1|   0.0000000322   15-147   MarR-like transcriptional regulators  
gi|161528561|ref|YP_001582387.1|   0.00000000000000105   26-83   Iron-dependent repressor protein  
gi|161528599|ref|YP_001582425.1|   0.00000489   10-66   RPO3F domain-like  
gi|161528640|ref|YP_001582466.1|   0.00000000000000331   31-90   Iron-dependent repressor protein  
gi|161528655|ref|YP_001582481.1|   0.0000000000284   4-62   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|161528660|ref|YP_001582486.1|   0.000000386   4-61   PF1790-like  
gi|161528663|ref|YP_001582489.1|   5.61e-25   17-112   ArsR-like transcriptional regulators  
gi|161528784|ref|YP_001582610.1|   0.000000000485   89-179   C-terminal fragment of elongation factor SelB  
  0.0000000708   24-81   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|161528789|ref|YP_001582615.1|   0.000000000694   70-136   Hypothetical protein PH1932  
  0.00000134   2-68   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|161528800|ref|YP_001582626.1|   0.000000000158   4-58   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|161528809|ref|YP_001582635.1|   0.0000000447   5-82   MarR-like transcriptional regulators  
gi|161528814|ref|YP_001582640.1|   0.000000436   22-88   PF1790-like  
gi|161528821|ref|YP_001582647.1|   0.0000000000369   43-103   PF1790-like  
gi|161528834|ref|YP_001582660.1|   0.0000000000000138   82-165   PF1790-like  
  0.000000027   9-69   Transcriptional regulator IclR, N-terminal domain  
gi|161528846|ref|YP_001582672.1|   0.00000000000727   14-154   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|161528860|ref|YP_001582686.1|   0.0000000000863   2-79   MarR-like transcriptional regulators  
gi|161528867|ref|YP_001582693.1|   0.0000000000000348   25-107   Hypothetical protein PH1932  
gi|161528870|ref|YP_001582696.1|   0.00000499   18-86   PF1790-like  
gi|161528880|ref|YP_001582706.1|   2.09e-22   12-99   ArsR-like transcriptional regulators  
gi|161528934|ref|YP_001582760.1|   0.0000000000669   24-92   Archaeal DNA-binding protein  
gi|161528954|ref|YP_001582780.1|   0.000000000451   6-89   Archaeal DNA-binding protein  
gi|161528965|ref|YP_001582791.1|   0.00000357   7-84   C-terminal fragment of elongation factor SelB  
gi|161529005|ref|YP_001582831.1|   0.00000323   9-93   FaeA-like  
gi|161529115|ref|YP_001582941.1|   1.16e-18   5-87   Transcription factor E/IIe-alpha, N-terminal domain  
gi|161529132|ref|YP_001582958.1|   1.31e-49   3-149   Rps19E-like  
gi|161529136|ref|YP_001582962.1|   0.0000000443   50-183   ArsR-like transcriptional regulators  
gi|161529153|ref|YP_001582979.1|   0.00000000000182   62-154   Hypothetical protein PH1932  
  0.0000000972   3-75   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|161529169|ref|YP_001582995.1|   5.01e-27   11-109   HxlR-like  
gi|161529172|ref|YP_001582998.1|   0.00000000000000395   31-89   Iron-dependent repressor protein  
gi|161529182|ref|YP_001583008.1|   0.0000000781   159-236   HxlR-like  
  0.00000212   73-145   ArsR-like transcriptional regulators  
  0.0000527   28-72   DNA-binding protein Mj223  
gi|161529191|ref|YP_001583017.1|   0.000011   299-391   Helicase DNA-binding domain  
gi|161529203|ref|YP_001583029.1|   0.0000289   2-64   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|161529223|ref|YP_001583049.1|   0.000000000000115   1-61   Lrp/AsnC-like transcriptional regulator N-terminal domain  
  0.00000123   137-182   Lrp/AsnC-like transcriptional regulator N-terminal domain  
  0.0399   138-273   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|161529305|ref|YP_001583131.1|   0.0000000185   124-193   TrmB-like  
 
Weak hits:
gi|161527961|ref|YP_001581787.1|   0.00654   96-157   TrmB-like  
gi|161527972|ref|YP_001581798.1|   0.00156   109-154   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|161528030|ref|YP_001581856.1|   0.0408   174-217   Rad21/Rec8-like  
gi|161528257|ref|YP_001582083.1|   0.00363   14-86   F93-like  
gi|161528438|ref|YP_001582264.1|   0.000193   45-91   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|161528508|ref|YP_001582334.1|   0.00327   208-262   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|161528615|ref|YP_001582441.1|   0.000395   17-69   RPO3F domain-like  
gi|161528676|ref|YP_001582502.1|   0.00191   17-79   DNA-binding protein Mj223  
gi|161528904|ref|YP_001582730.1|   0.000264   171-233   Transcriptional regulator IclR, N-terminal domain  
gi|161528912|ref|YP_001582738.1|   0.00605   6-59   DNA-binding protein Mj223  
gi|161529095|ref|YP_001582921.1|   0.0295   2-37   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|161529307|ref|YP_001583133.1|   0.000417   60-120   Penicillinase repressor  

Candidatus Korarchaeum cryptofilum OPF8 has 51 significant domains in 49 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|170289631|ref|YP_001736447.1|   0.000000000000544   18-133   Iron-dependent repressor protein  
gi|170289648|ref|YP_001736464.1|   0.00000000000146   7-71   ArsR-like transcriptional regulators  
gi|170289667|ref|YP_001736483.1|   0.0000925   24-68   MarR-like transcriptional regulators  
gi|170289739|ref|YP_001736555.1|   0.000000000572   23-78   Z-DNA binding domain  
gi|170289754|ref|YP_001736570.1|   3.91e-23   7-115   PF1790-like  
  0.0000145   163-202   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|170289757|ref|YP_001736573.1|   0.0000318   41-106   F93-like  
gi|170289801|ref|YP_001736617.1|   0.0000283   187-229   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|170289813|ref|YP_001736629.1|   0.0000000000000264   158-221   MarR-like transcriptional regulators  
gi|170289834|ref|YP_001736650.1|   0.00000000116   180-238   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|170289854|ref|YP_001736670.1|   4.5e-23   3-157   PF1790-like  
gi|170289860|ref|YP_001736676.1|   0.0000528   7-75   F93-like  
gi|170289868|ref|YP_001736684.1|   0.0000000000128   74-140   ScpB/YpuH-like  
  0.00000136   1-70   ScpB/YpuH-like  
gi|170289871|ref|YP_001736687.1|   0.00000000000000226   28-84   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|170290034|ref|YP_001736850.1|   2.47e-23   12-125   PadR-like  
gi|170290050|ref|YP_001736866.1|   0.000000949   135-197   Transcriptional regulator IclR, N-terminal domain  
gi|170290082|ref|YP_001736898.1|   0.00000000000000109   2-90   MarR-like transcriptional regulators  
gi|170290115|ref|YP_001736931.1|   0.00000000000000442   3-63   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|170290153|ref|YP_001736969.1|   0.000000000634   242-302   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|170290165|ref|YP_001736981.1|   0.00000152   26-95   MarR-like transcriptional regulators  
gi|170290198|ref|YP_001737014.1|   3.27e-16   256-323   Helicase DNA-binding domain  
gi|170290204|ref|YP_001737020.1|   7.35e-17   8-69   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|170290205|ref|YP_001737021.1|   0.000000769   219-270   MarR-like transcriptional regulators  
gi|170290233|ref|YP_001737049.1|   1.17e-16   271-336   Helicase DNA-binding domain  
gi|170290234|ref|YP_001737050.1|   1.09e-16   289-356   Helicase DNA-binding domain  
gi|170290256|ref|YP_001737072.1|   0.0000000191   21-67   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|170290375|ref|YP_001737191.1|   3.36e-17   266-354   N-terminal domain of molybdate-dependent transcriptional regulator ModE  
gi|170290384|ref|YP_001737200.1|   0.00000000000000148   5-66   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|170290407|ref|YP_001737223.1|   1.92e-20   5-92   PadR-like  
gi|170290466|ref|YP_001737282.1|   3.6e-18   274-344   Helicase DNA-binding domain  
gi|170290490|ref|YP_001737306.1|   0.0000000707   14-73   N-terminal domain of molybdate-dependent transcriptional regulator ModE  
gi|170290557|ref|YP_001737373.1|   0.0000000026   25-86   PH0730 N-terminal domain-like  
gi|170290609|ref|YP_001737425.1|   0.0000000806   15-78   MarR-like transcriptional regulators  
gi|170290623|ref|YP_001737439.1|   1.45e-23   270-375   Helicase DNA-binding domain  
gi|170290648|ref|YP_001737464.1|   0.00000187   300-364   Hypothetical protein PH1932  
gi|170290756|ref|YP_001737572.1|   0.000000108   54-133   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|170290768|ref|YP_001737584.1|   0.0000000000000453   19-132   Hypothetical protein PH1932  
gi|170290831|ref|YP_001737647.1|   1.12e-17   5-99   PadR-like  
gi|170290853|ref|YP_001737669.1|   0.000000000000165   11-66   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|170290888|ref|YP_001737704.1|   0.000000158   6-92   TrmB-like  
gi|170290938|ref|YP_001737754.1|   4.21e-53   13-151   Rps19E-like  
gi|170290966|ref|YP_001737782.1|   0.00000000000000907   392-478   RecQ helicase DNA-binding domain-like  
gi|170290997|ref|YP_001737813.1|   1.36e-20   294-393   Helicase DNA-binding domain  
gi|170291009|ref|YP_001737825.1|   0.000000000547   5-70   Dissimilatory sulfite reductase DsvD  
gi|170291011|ref|YP_001737827.1|   0.000000372   220-283   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|170291066|ref|YP_001737882.1|   0.0000000000894   293-362   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|170291089|ref|YP_001737905.1|   0.0000000000133   205-272   Methionine aminopeptidase, insert domain  
gi|170291166|ref|YP_001737982.1|   7.21e-17   2-76   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|170291168|ref|YP_001737984.1|   8.98e-31   8-105   PF0610-like  
gi|170291226|ref|YP_001738042.1|   0.00000654   21-84   Transcription factor E/IIe-alpha, N-terminal domain  
 
Weak hits:
gi|170289659|ref|YP_001736475.1|   0.059   72-108   Transcriptional regulator IclR, N-terminal domain  
gi|170289743|ref|YP_001736559.1|   0.0653   323-377   Helicase DNA-binding domain  
gi|170289800|ref|YP_001736616.1|   0.0545   223-303   MarR-like transcriptional regulators  
gi|170290243|ref|YP_001737059.1|   0.000238   214-307   FaeA-like  
gi|170290244|ref|YP_001737060.1|   0.00381   250-325   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|170290355|ref|YP_001737171.1|   0.0544   19-77   Transcription factor E/IIe-alpha, N-terminal domain  
gi|170290396|ref|YP_001737212.1|   0.00726   126-180   GntR-like transcriptional regulators  
gi|170290581|ref|YP_001737397.1|   0.0159   137-176   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|170290973|ref|YP_001737789.1|   0.00113   7-71   MarR-like transcriptional regulators  
gi|170291059|ref|YP_001737875.1|   0.000534   153-199   Transcription factor E/IIe-alpha, N-terminal domain  

Acidilobus saccharovorans 345-15 has 36 significant domains in 36 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|302347910|ref|YP_003815548.1|   0.00000102   15-69   TrmB-like  
gi|302347950|ref|YP_003815588.1|   0.00000362   8-107   MarR-like transcriptional regulators  
  0.000229   113-165   MarR-like transcriptional regulators  
gi|302348059|ref|YP_003815697.1|   2.57e-16   9-78   GntR-like transcriptional regulators  
gi|302348093|ref|YP_003815731.1|   0.00000000087   40-104   Transcription factor E/IIe-alpha, N-terminal domain  
gi|302348096|ref|YP_003815734.1|   0.000000182   36-99   Biotin repressor-like  
  0.00876   182-231   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|302348097|ref|YP_003815735.1|   0.00000011   21-89   PH0730 N-terminal domain-like  
gi|302348119|ref|YP_003815757.1|   1.42e-17   16-139   FUR-like  
gi|302348158|ref|YP_003815796.1|   0.0000000066   22-65   MarR-like transcriptional regulators  
gi|302348215|ref|YP_003815853.1|   2.46e-23   21-123   PadR-like  
gi|302348242|ref|YP_003815880.1|   0.000000000000258   201-277   Methionine aminopeptidase, insert domain  
gi|302348289|ref|YP_003815927.1|   0.000000000682   17-91   YjcQ-like  
gi|302348303|ref|YP_003815941.1|   0.0000231   11-118   MarR-like transcriptional regulators  
gi|302348306|ref|YP_003815944.1|   0.00000132   8-64   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|302348315|ref|YP_003815953.1|   0.0000000000497   45-162   Iron-dependent repressor protein  
gi|302348318|ref|YP_003815956.1|   0.0000000000828   2-61   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|302348395|ref|YP_003816033.1|   0.00000169   49-113   LexA repressor, N-terminal DNA-binding domain  
gi|302348441|ref|YP_003816079.1|   0.0000000299   249-313   Helicase DNA-binding domain  
gi|302348489|ref|YP_003816127.1|   0.00000000000015   322-391   Helicase DNA-binding domain  
gi|302348516|ref|YP_003816154.1|   0.00000000000273   226-288   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|302348548|ref|YP_003816186.1|   3.13e-25   293-397   Helicase DNA-binding domain  
gi|302348720|ref|YP_003816358.1|   0.0000000000354   413-498   RecQ helicase DNA-binding domain-like  
gi|302348728|ref|YP_003816366.1|   4.36e-19   15-101   PadR-like  
gi|302348796|ref|YP_003816434.1|   0.0000000813   272-336   Transcriptional regulator IclR, N-terminal domain  
gi|302348961|ref|YP_003816599.1|   0.0000000109   22-107   Rio2 serine protein kinase N-terminal domain  
gi|302348962|ref|YP_003816600.1|   0.00000000000000209   26-93   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|302348989|ref|YP_003816627.1|   0.00000000000000401   17-107   PadR-like  
gi|302349011|ref|YP_003816649.1|   1.86e-53   2-150   Rps19E-like  
gi|302349029|ref|YP_003816667.1|   0.000000000224   8-89   PF1790-like  
gi|302349039|ref|YP_003816677.1|   0.00000156   6-96   PadR-like  
gi|302349049|ref|YP_003816687.1|   0.000062   47-93   MarR-like transcriptional regulators  
gi|302349097|ref|YP_003816735.1|   4.3e-21   10-127   PadR-like  
gi|302349116|ref|YP_003816754.1|   0.0000000000000052   9-68   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|302349122|ref|YP_003816760.1|   1.36e-20   300-403   Helicase DNA-binding domain  
gi|302349123|ref|YP_003816761.1|   0.0000000000501   6-72   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|302349143|ref|YP_003816781.1|   3.88e-16   15-90   PF1790-like  
gi|302349208|ref|YP_003816846.1|   0.0000000000839   3-86   ArsR-like transcriptional regulators  
 
Weak hits:
gi|302347805|ref|YP_003815443.1|   0.000496   119-173   Plant O-methyltransferase, N-terminal domain  
gi|302347913|ref|YP_003815551.1|   0.000375   4-64   C-terminal fragment of elongation factor SelB  
gi|302348083|ref|YP_003815721.1|   0.00253   46-113   ArsR-like transcriptional regulators  
gi|302348138|ref|YP_003815776.1|   0.000243   4-80   MarR-like transcriptional regulators  
gi|302348155|ref|YP_003815793.1|   0.00185   5-65   Hypothetical protein YhgG  
gi|302348528|ref|YP_003816166.1|   0.00091   3-54   CodY HTH domain  
gi|302348750|ref|YP_003816388.1|   0.000464   218-260   CodY HTH domain  

Fervidicoccus fontis Kam940 has 36 significant domains in 36 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|385805106|ref|YP_005841504.1|   0.0000000000000705   147-210   ArsR-like transcriptional regulators  
gi|385805118|ref|YP_005841516.1|   0.000000038   1-59   F93-like  
gi|385805220|ref|YP_005841618.1|   0.00000000707   288-355   Helicase DNA-binding domain  
gi|385805229|ref|YP_005841627.1|   0.000000662   5-109   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|385805257|ref|YP_005841655.1|   0.000000000000361   13-121   DNA-binding protein Mj223  
gi|385805284|ref|YP_005841682.1|   0.000000000000102   7-81   MarR-like transcriptional regulators  
gi|385805291|ref|YP_005841689.1|   0.0000594   9-52   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|385805302|ref|YP_005841700.1|   0.00000000473   3-104   Transcriptional regulator IclR, N-terminal domain  
gi|385805340|ref|YP_005841738.1|   0.000000000000033   7-92   Rio2 serine protein kinase N-terminal domain  
gi|385805375|ref|YP_005841773.1|   0.0000000694   198-277   Methionine aminopeptidase, insert domain  
gi|385805395|ref|YP_005841793.1|   0.00000000000249   32-125   TrmB-like  
gi|385805424|ref|YP_005841822.1|   0.00000000000000325   37-105   DNA-binding protein Mj223  
gi|385805433|ref|YP_005841831.1|   0.0000043   267-314   Z-DNA binding domain  
gi|385805455|ref|YP_005841853.1|   0.00000000000227   229-289   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|385805743|ref|YP_005842141.1|   1.04e-23   12-110   PadR-like  
gi|385805829|ref|YP_005842227.1|   2.4e-16   7-121   N-terminal domain of molybdate-dependent transcriptional regulator ModE  
gi|385805830|ref|YP_005842228.1|   0.0000327   321-375   FUR-like  
gi|385805871|ref|YP_005842269.1|   1.04e-19   7-90   Transcription factor E/IIe-alpha, N-terminal domain  
gi|385805880|ref|YP_005842278.1|   0.0000577   35-80   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|385805895|ref|YP_005842293.1|   5.98e-24   296-402   Helicase DNA-binding domain  
gi|385805910|ref|YP_005842308.1|   0.0000000000165   21-96   PadR-like  
gi|385805964|ref|YP_005842362.1|   0.000000766   32-101   MarR-like transcriptional regulators  
gi|385806106|ref|YP_005842504.1|   0.00000000000731   3-74   Heat-inducible transcription repressor HrcA, N-terminal domain  
gi|385806178|ref|YP_005842576.1|   0.000000000338   4-70   Archaeal DNA-binding protein  
gi|385806202|ref|YP_005842600.1|   1.63e-22   5-107   PF0610-like  
gi|385806204|ref|YP_005842602.1|   0.00000344   12-73   Archaeal DNA-binding protein  
gi|385806230|ref|YP_005842628.1|   0.00000000000000634   10-72   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|385806254|ref|YP_005842652.1|   0.00000000806   5-78   HxlR-like  
gi|385806265|ref|YP_005842663.1|   0.0000234   14-74   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|385806298|ref|YP_005842696.1|   8.59e-49   3-153   Rps19E-like  
gi|385806339|ref|YP_005842737.1|   0.0000000000000886   15-94   TrmB-like  
gi|385806368|ref|YP_005842766.1|   6.52e-21   10-90   ArsR-like transcriptional regulators  
gi|385806407|ref|YP_005842805.1|   4.22e-20   303-402   Helicase DNA-binding domain  
gi|385806408|ref|YP_005842806.1|   0.00000000000625   10-68   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|385806411|ref|YP_005842809.1|   6.44e-16   414-499   RecQ helicase DNA-binding domain-like  
gi|385806435|ref|YP_005842833.1|   0.000000000238   144-206   Lrp/AsnC-like transcriptional regulator N-terminal domain  
 
Weak hits:
gi|385805388|ref|YP_005841786.1|   0.000126   6-63   Penicillinase repressor  
gi|385805709|ref|YP_005842107.1|   0.0363   12-32   SCF ubiquitin ligase complex WHB domain  
gi|385805779|ref|YP_005842177.1|   0.00136   43-94   Transcriptional regulator IclR, N-terminal domain  
gi|385806253|ref|YP_005842651.1|   0.00619   18-76   Biotin repressor-like  
  0.0241   192-235   Lrp/AsnC-like transcriptional regulator N-terminal domain  

Pyrolobus fumarii 1A has 42 significant domains in 42 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|347522555|ref|YP_004780125.1|   6.94e-29   292-396   Helicase DNA-binding domain  
gi|347522578|ref|YP_004780148.1|   0.000000489   46-101   MarR-like transcriptional regulators  
gi|347522643|ref|YP_004780213.1|   1.11e-56   2-155   Rps19E-like  
gi|347522792|ref|YP_004780362.1|   7e-18   7-67   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|347522818|ref|YP_004780388.1|   0.00000000000000126   14-95   PadR-like  
gi|347522981|ref|YP_004780551.1|   0.00000065   171-231   Z-DNA binding domain  
gi|347523055|ref|YP_004780625.1|   0.00000249   143-217   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|347523111|ref|YP_004780681.1|   0.00000000115   8-73   Z-DNA binding domain  
gi|347523148|ref|YP_004780718.1|   0.0000000000107   18-102   MarR-like transcriptional regulators  
gi|347523193|ref|YP_004780763.1|   0.00000000554   16-70   ScpB/YpuH-like  
gi|347523195|ref|YP_004780765.1|   0.00000721   215-281   Transcriptional regulator IclR, N-terminal domain  
gi|347523204|ref|YP_004780774.1|   2.65e-17   30-116   N-terminal domain of molybdate-dependent transcriptional regulator ModE  
gi|347523288|ref|YP_004780858.1|   0.00000000000137   245-309   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|347523349|ref|YP_004780919.1|   8.94e-20   32-101   ArsR-like transcriptional regulators  
gi|347523350|ref|YP_004780920.1|   9.3e-21   8-90   Rio2 serine protein kinase N-terminal domain  
gi|347523427|ref|YP_004780997.1|   0.00000436   29-139   ROK associated domain  
gi|347523483|ref|YP_004781053.1|   0.000000000000389   75-166   TrmB-like  
gi|347523490|ref|YP_004781060.1|   0.0000000000326   197-279   Methionine aminopeptidase, insert domain  
gi|347523561|ref|YP_004781131.1|   0.0000022   21-80   C-terminal fragment of elongation factor SelB  
gi|347523569|ref|YP_004781139.1|   1.25e-21   5-83   Transcription factor E/IIe-alpha, N-terminal domain  
gi|347523574|ref|YP_004781144.1|   2.83e-25   36-173   PadR-like  
gi|347523579|ref|YP_004781149.1|   0.000000000000312   14-91   PadR-like  
gi|347523645|ref|YP_004781215.1|   0.000000000649   21-83   CAP C-terminal domain-like  
gi|347523678|ref|YP_004781248.1|   0.0000000121   4-92   RPO3F domain-like  
gi|347523680|ref|YP_004781250.1|   0.0000142   125-179   MarR-like transcriptional regulators  
  0.000206   2-65   MarR-like transcriptional regulators  
  0.00273   235-281   FtsK C-terminal domain-like  
gi|347523747|ref|YP_004781317.1|   0.0000841   21-74   MarR-like transcriptional regulators  
gi|347523754|ref|YP_004781324.1|   0.000000575   234-313   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|347523850|ref|YP_004781420.1|   0.0000000000000106   4-132   Iron-dependent repressor protein  
gi|347523867|ref|YP_004781437.1|   4.35e-27   18-119   PF0610-like  
gi|347523969|ref|YP_004781539.1|   0.00000648   1418-1477   TrmB-like  
gi|347523979|ref|YP_004781549.1|   0.000000000000257   4-75   Heat-inducible transcription repressor HrcA, N-terminal domain  
gi|347524016|ref|YP_004781586.1|   0.0000024   5-92   MarR-like transcriptional regulators  
gi|347524027|ref|YP_004781597.1|   0.000000000000043   33-140   TrmB-like  
gi|347524063|ref|YP_004781633.1|   0.0000000067   39-100   ArsR-like transcriptional regulators  
  0.000734   172-256   Z-DNA binding domain  
gi|347524103|ref|YP_004781673.1|   0.0000294   21-86   Transcriptional regulator IclR, N-terminal domain  
gi|347524104|ref|YP_004781674.1|   0.00000169   33-116   Transcriptional regulator IclR, N-terminal domain  
gi|347524130|ref|YP_004781700.1|   0.00000145   36-92   Transcriptional regulator IclR, N-terminal domain  
gi|347524259|ref|YP_004781829.1|   0.000000043   23-68   CAP C-terminal domain-like  
gi|347524347|ref|YP_004781917.1|   0.0000452   41-98   Archaeal DNA-binding protein  
gi|347524472|ref|YP_004782042.1|   0.00000000000000153   5-87   TrmB-like  
gi|347524473|ref|YP_004782043.1|   4.08e-27   311-410   Helicase DNA-binding domain  
gi|347524503|ref|YP_004782073.1|   0.000000000000217   2-71   Lrp/AsnC-like transcriptional regulator N-terminal domain  
 
Weak hits:
gi|347522575|ref|YP_004780145.1|   0.000154   10-77   Biotin repressor-like  
gi|347522628|ref|YP_004780198.1|   0.0762   640-693   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|347522664|ref|YP_004780234.1|   0.00762   10-82   MarR-like transcriptional regulators  
gi|347522881|ref|YP_004780451.1|   0.0286   770-830   MarR-like transcriptional regulators  
gi|347522915|ref|YP_004780485.1|   0.00757   27-94   Z-DNA binding domain  
gi|347522917|ref|YP_004780487.1|   0.00113   66-141   F93-like  
gi|347523088|ref|YP_004780658.1|   0.00161   66-122   F93-like  
gi|347523243|ref|YP_004780813.1|   0.00161   158-216   Z-DNA binding domain  
gi|347523244|ref|YP_004780814.1|   0.000159   435-489   TrmB-like  
gi|347523301|ref|YP_004780871.1|   0.000155   5-79   MarR-like transcriptional regulators  
gi|347523311|ref|YP_004780881.1|   0.000272   42-147   Transcriptional regulator IclR, N-terminal domain  
gi|347523358|ref|YP_004780928.1|   0.00105   6-60   PCI domain (PINT motif)  
gi|347523450|ref|YP_004781020.1|   0.000185   291-337   CodY HTH domain  
gi|347523520|ref|YP_004781090.1|   0.0748   14-68   Z-DNA binding domain  
gi|347523707|ref|YP_004781277.1|   0.000599   203-265   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|347523891|ref|YP_004781461.1|   0.00418   21-81   Lrp/AsnC-like transcriptional regulator N-terminal domain  
  0.0152   207-252   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|347524072|ref|YP_004781642.1|   0.0308   40-96   PH0730 N-terminal domain-like  

Hyperthermus butylicus DSM 5456 has 35 significant domains in 35 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|124026959|ref|YP_001012279.1|   0.0000000000502   39-129   TrmB-like  
gi|124026974|ref|YP_001012294.1|   3.12e-21   8-90   Rio2 serine protein kinase N-terminal domain  
gi|124026975|ref|YP_001012295.1|   3.35e-16   36-100   ArsR-like transcriptional regulators  
gi|124027000|ref|YP_001012320.1|   0.0000000000000944   7-75   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|124027015|ref|YP_001012335.1|   0.0000145   18-91   F93-like  
gi|124027016|ref|YP_001012336.1|   0.0000000000000054   2-94   FUR-like  
gi|124027017|ref|YP_001012337.1|   0.0000000000107   6-76   Heat-inducible transcription repressor HrcA, N-terminal domain  
gi|124027060|ref|YP_001012380.1|   0.000000000000618   22-81   Iron-dependent repressor protein  
gi|124027215|ref|YP_001012535.1|   0.00000211   144-220   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|124027233|ref|YP_001012553.1|   5.44e-21   17-102   N-terminal domain of molybdate-dependent transcriptional regulator ModE  
gi|124027350|ref|YP_001012670.1|   0.0000000000139   13-79   RPO3F domain-like  
gi|124027452|ref|YP_001012772.1|   0.000023   6-56   ReutB4095-like  
gi|124027479|ref|YP_001012799.1|   4.72e-27   292-398   Helicase DNA-binding domain  
gi|124027528|ref|YP_001012848.1|   0.000000101   165-224   Hypothetical protein YhgG  
gi|124027572|ref|YP_001012892.1|   0.00000000000674   31-88   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|124027582|ref|YP_001012902.1|   0.000000000291   1-88   PF1790-like  
gi|124027587|ref|YP_001012907.1|   0.000000000172   1-67   FaeA-like  
gi|124027675|ref|YP_001012995.1|   0.0000458   239-284   Z-DNA binding domain  
gi|124027759|ref|YP_001013079.1|   0.000000000000143   199-277   Methionine aminopeptidase, insert domain  
gi|124027781|ref|YP_001013101.1|   0.00000000000221   8-81   PF1790-like  
gi|124027782|ref|YP_001013102.1|   1.63e-28   303-407   Helicase DNA-binding domain  
gi|124027928|ref|YP_001013248.1|   0.000000000000319   243-307   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|124027971|ref|YP_001013291.1|   0.0000000000403   5-72   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|124027972|ref|YP_001013292.1|   0.00000469   20-72   Transcriptional regulator IclR, N-terminal domain  
gi|124027998|ref|YP_001013318.1|   3.76e-19   9-87   Transcription factor E/IIe-alpha, N-terminal domain  
gi|124028031|ref|YP_001013351.1|   0.0000000000044   213-302   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|124028069|ref|YP_001013389.1|   0.0000221   11-62   PH0730 N-terminal domain-like  
gi|124028075|ref|YP_001013395.1|   0.0000000309   39-97   TrmB-like  
gi|124028083|ref|YP_001013403.1|   0.000000017   42-100   TrmB-like  
gi|124028118|ref|YP_001013438.1|   0.00000000000000202   31-112   TrmB-like  
gi|124028194|ref|YP_001013514.1|   0.000000000000862   12-67   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|124028278|ref|YP_001013598.1|   1.31e-31   4-105   PF0610-like  
gi|124028320|ref|YP_001013640.1|   4.37e-29   9-142   PadR-like  
gi|124028373|ref|YP_001013693.1|   0.00000000672   3-87   MarR-like transcriptional regulators  
gi|124028439|ref|YP_001013759.1|   1.02e-58   2-151   Rps19E-like  
 
Weak hits:
gi|124027058|ref|YP_001012378.1|   0.0221   14-55   MarR-like transcriptional regulators  
gi|124027380|ref|YP_001012700.1|   0.00231   74-168   Hypothetical protein PH1932  
gi|124027400|ref|YP_001012720.1|   0.0486   9-75   Biotin repressor-like  
gi|124027761|ref|YP_001013081.1|   0.000224   11-75   MarR-like transcriptional regulators  
gi|124027845|ref|YP_001013165.1|   0.00247   3-68   MarR-like transcriptional regulators  
gi|124027903|ref|YP_001013223.1|   0.000467   333-384   Hypothetical protein PH1932  
gi|124027993|ref|YP_001013313.1|   0.001   26-62   Z-DNA binding domain  
gi|124028043|ref|YP_001013363.1|   0.0025   22-83   Lrp/AsnC-like transcriptional regulator N-terminal domain  

Thermogladius cellulolyticus 1633 has 28 significant domains in 28 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|389860347|ref|YP_006362586.1|   0.00000000000144   7-89   Rio2 serine protein kinase N-terminal domain  
gi|389860383|ref|YP_006362622.1|   0.000000000212   9-69   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|389860409|ref|YP_006362648.1|   0.0000000938   5-54   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|389860410|ref|YP_006362649.1|   3.26e-27   303-407   Helicase DNA-binding domain  
gi|389860546|ref|YP_006362785.1|   0.000000272   254-313   Helicase DNA-binding domain  
gi|389860577|ref|YP_006362816.1|   0.00000177   197-272   Methionine aminopeptidase, insert domain  
gi|389860597|ref|YP_006362837.1|   0.00000000544   17-89   Transcription factor E/IIe-alpha, N-terminal domain  
gi|389860699|ref|YP_006362939.1|   3.2e-51   3-151   Rps19E-like  
gi|389860838|ref|YP_006363078.1|   3.86e-23   293-393   Helicase DNA-binding domain  
gi|389860948|ref|YP_006363188.1|   0.000000286   30-84   Transcriptional regulator IclR, N-terminal domain  
gi|389860991|ref|YP_006363231.1|   0.000000000000963   17-98   PadR-like  
gi|389860996|ref|YP_006363236.1|   0.0000176   9-52   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|389861022|ref|YP_006363262.1|   0.00000000000714   248-321   MarR-like transcriptional regulators  
gi|389861188|ref|YP_006363428.1|   0.0000000000000401   19-91   Iron-dependent repressor protein  
gi|389861190|ref|YP_006363430.1|   0.0000000000212   12-72   PH0730 N-terminal domain-like  
gi|389861234|ref|YP_006363474.1|   0.0000803   12-74   Hypothetical protein YhgG  
gi|389861246|ref|YP_006363486.1|   1.48e-21   2-83   PadR-like  
gi|389861288|ref|YP_006363528.1|   0.0000000669   14-86   MarR-like transcriptional regulators  
gi|389861301|ref|YP_006363541.1|   5.67e-18   2-62   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|389861341|ref|YP_006363581.1|   0.00000000597   140-193   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|389861367|ref|YP_006363607.1|   0.00000735   143-195   Penicillinase repressor  
gi|389861368|ref|YP_006363608.1|   0.000000429   5-65   MarR-like transcriptional regulators  
gi|389861421|ref|YP_006363661.1|   0.000000000107   13-76   Transcriptional regulator IclR, N-terminal domain  
gi|389861534|ref|YP_006363774.1|   0.00000000594   10-57   TrmB-like  
gi|389861662|ref|YP_006363902.1|   0.0000000000729   373-430   F93-like  
gi|389861663|ref|YP_006363903.1|   0.0000000000000924   11-72   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|389861672|ref|YP_006363912.1|   0.00000000000112   412-499   RecQ helicase DNA-binding domain-like  
gi|389861704|ref|YP_006363944.1|   0.0000053   8-75   LexA repressor, N-terminal DNA-binding domain  
 
Weak hits:
gi|389860359|ref|YP_006362598.1|   0.00151   221-266   CodY HTH domain  
gi|389860569|ref|YP_006362808.1|   0.0109   20-83   Penicillinase repressor  
gi|389860793|ref|YP_006363033.1|   0.0486   159-204   TrmB-like  
gi|389860887|ref|YP_006363127.1|   0.00191   13-55   PadR-like  
gi|389861628|ref|YP_006363868.1|   0.0192   43-93   TrmB-like  

Ignisphaera aggregans DSM 17230 has 44 significant domains in 44 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|305662446|ref|YP_003858734.1|   1.1e-27   297-402   Helicase DNA-binding domain  
gi|305662463|ref|YP_003858751.1|   0.0000331   6-80   RPO3F domain-like  
gi|305662517|ref|YP_003858805.1|   0.00000119   15-74   FtsK C-terminal domain-like  
gi|305662549|ref|YP_003858837.1|   2.63e-17   3-82   Transcription factor E/IIe-alpha, N-terminal domain  
gi|305662693|ref|YP_003858981.1|   6.48e-23   3-97   PadR-like  
gi|305662728|ref|YP_003859016.1|   2.99e-26   7-101   PF0610-like  
gi|305662774|ref|YP_003859062.1|   0.0000000177   198-277   Methionine aminopeptidase, insert domain  
gi|305662779|ref|YP_003859067.1|   0.000000000000463   7-66   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|305662933|ref|YP_003859221.1|   0.00000000116   22-96   Archaeal DNA-binding protein  
gi|305662952|ref|YP_003859240.1|   0.00000000000592   7-84   TrmB-like  
gi|305662993|ref|YP_003859281.1|   0.0000000333   7-55   FaeA-like  
gi|305663024|ref|YP_003859312.1|   0.00000000000213   5-86   Archaeal DNA-binding protein  
gi|305663035|ref|YP_003859323.1|   0.0000000429   157-216   Transcription factor E/IIe-alpha, N-terminal domain  
gi|305663185|ref|YP_003859473.1|   0.00000000107   227-292   Penicillinase repressor  
gi|305663211|ref|YP_003859499.1|   4.16e-18   15-99   MarR-like transcriptional regulators  
gi|305663267|ref|YP_003859555.1|   0.0000000000257   5-120   TrmB-like  
gi|305663296|ref|YP_003859584.1|   0.00000000000201   35-88   Transcription factor E/IIe-alpha, N-terminal domain  
gi|305663320|ref|YP_003859608.1|   0.00000000645   160-229   Penicillinase repressor  
gi|305663370|ref|YP_003859658.1|   0.000000000319   8-61   Biotin repressor-like  
gi|305663403|ref|YP_003859691.1|   0.000000000749   390-470   PadR-like  
gi|305663619|ref|YP_003859907.1|   0.000000178   22-76   Transcriptional regulator IclR, N-terminal domain  
gi|305663666|ref|YP_003859954.1|   0.00000141   10-75   PF1790-like  
gi|305663673|ref|YP_003859961.1|   0.0000000000000535   6-102   F93-like  
gi|305663683|ref|YP_003859971.1|   0.000000252   55-117   MarR-like transcriptional regulators  
  0.00273   202-256   MarR-like transcriptional regulators  
gi|305663699|ref|YP_003859987.1|   0.0000000000000145   11-67   Iron-dependent repressor protein  
gi|305663703|ref|YP_003859991.1|   0.0000000000573   13-78   F93-like  
gi|305663803|ref|YP_003860091.1|   4.3e-50   2-151   Rps19E-like  
gi|305663833|ref|YP_003860121.1|   5.81e-19   11-101   PadR-like  
gi|305663883|ref|YP_003860171.1|   0.0000000000000486   29-109   ArsR-like transcriptional regulators  
gi|305663894|ref|YP_003860182.1|   3.81e-26   301-396   Helicase DNA-binding domain  
gi|305663915|ref|YP_003860203.1|   0.00000718   249-295   Transcriptional regulator IclR, N-terminal domain  
gi|305663925|ref|YP_003860213.1|   0.0000000816   6-89   Rio2 serine protein kinase N-terminal domain  
gi|305663928|ref|YP_003860216.1|   0.00000000278   27-92   PH0730 N-terminal domain-like  
gi|305663944|ref|YP_003860232.1|   0.0000141   11-74   ArsR-like transcriptional regulators  
gi|305663977|ref|YP_003860265.1|   0.0000000000000517   432-522   RecQ helicase DNA-binding domain-like  
gi|305663982|ref|YP_003860270.1|   0.00000000000422   3-64   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|305663991|ref|YP_003860279.1|   0.000000000319   250-311   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|305664000|ref|YP_003860288.1|   0.00000000772   5-69   Transcriptional regulator IclR, N-terminal domain  
gi|305664040|ref|YP_003860328.1|   0.000000000295   31-112   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|305664145|ref|YP_003860433.1|   0.000000000000172   3-55   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|305664206|ref|YP_003860494.1|   4.4e-21   288-359   Helicase DNA-binding domain  
gi|305664239|ref|YP_003860527.1|   0.00000000000608   10-139   ArsR-like transcriptional regulators  
  0.0013   347-395   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|305664360|ref|YP_003860648.1|   0.0000000602   31-115   DNA-binding protein Mj223  
gi|305664361|ref|YP_003860649.1|   0.00000384   33-90   Lrp/AsnC-like transcriptional regulator N-terminal domain  
 
Weak hits:
gi|305662627|ref|YP_003858915.1|   0.000522   39-95   MarR-like transcriptional regulators  
gi|305662967|ref|YP_003859255.1|   0.000764   8-77   Hypothetical protein PH1932  
gi|305663095|ref|YP_003859383.1|   0.000118   4-79   MarR-like transcriptional regulators  
gi|305663164|ref|YP_003859452.1|   0.0425   32-98   DNA-binding protein Mj223  
gi|305663532|ref|YP_003859820.1|   0.0422   67-112   TrmB-like  
gi|305663624|ref|YP_003859912.1|   0.0735   87-125   F93-like  
gi|305663680|ref|YP_003859968.1|   0.00163   53-103   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|305663696|ref|YP_003859984.1|   0.000163   224-284   Helicase DNA-binding domain  
gi|305663893|ref|YP_003860181.1|   0.000177   11-82   FtsK C-terminal domain-like  
gi|305664154|ref|YP_003860442.1|   0.000693   151-191   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|305664332|ref|YP_003860620.1|   0.00199   56-100   Z-DNA binding domain  

Aeropyrum pernix K1 has 43 significant domains in 43 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|118430846|ref|NP_146909.2|   0.00000000000554   4-93   TrmB-like  
gi|118430906|ref|NP_147003.2|   2.18e-25   299-405   Helicase DNA-binding domain  
gi|118430907|ref|YP_874803.1|   0.0000000000967   5-74   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|118430925|ref|NP_147034.2|   0.00000000272   416-499   RecQ helicase DNA-binding domain-like  
gi|118430978|ref|NP_147120.2|   9.4e-18   23-137   Hypothetical protein PH1932  
gi|118431069|ref|NP_147262.2|   5.99e-27   288-394   Helicase DNA-binding domain  
gi|118431117|ref|NP_147346.2|   0.000000000277   8-89   Archaeal DNA-binding protein  
gi|118431168|ref|YP_874841.1|   0.00000000000432   7-77   PH0730 N-terminal domain-like  
gi|118431169|ref|YP_874842.1|   0.00000368   8-87   F93-like  
gi|118431194|ref|NP_147491.2|   0.0000000941   8-64   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|118431240|ref|YP_874858.1|   0.000000000000937   12-75   ScpB/YpuH-like  
gi|118431274|ref|YP_874867.1|   0.000000568   215-262   CodY HTH domain  
gi|118431283|ref|NP_147639.2|   0.000000000000397   3-78   Heat-inducible transcription repressor HrcA, N-terminal domain  
gi|118431332|ref|NP_147721.2|   0.00000000000015   199-276   Methionine aminopeptidase, insert domain  
gi|118431370|ref|NP_147791.2|   0.00000196   22-114   MarR-like transcriptional regulators  
gi|118431377|ref|NP_147813.2|   0.00000000041   171-237   ArsR-like transcriptional regulators  
gi|118431422|ref|NP_147893.2|   7.45e-26   19-153   PadR-like  
gi|118431464|ref|YP_874895.1|   0.00000000000216   4-56   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|118431479|ref|NP_147981.2|   0.0000243   5-65   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|118431528|ref|NP_148049.2|   2.97e-26   4-91   Rio2 serine protein kinase N-terminal domain  
gi|118431529|ref|YP_874909.1|   1.88e-20   7-85   PF1790-like  
gi|118431682|ref|NP_148312.2|   0.000000103   24-80   PH0730 N-terminal domain-like  
gi|118431683|ref|NP_148313.2|   0.00000000269   36-98   TrmB-like  
  0.067   172-247   MarR-like transcriptional regulators  
gi|118431685|ref|NP_148319.2|   0.000000000000744   23-101   Transcription factor E/IIe-alpha, N-terminal domain  
gi|118431690|ref|NP_148328.2|   3.29e-23   9-128   FUR-like  
gi|118431707|ref|NP_148351.2|   0.0000195   4-69   HxlR-like  
gi|118431822|ref|NP_148525.2|   0.0000118   3-77   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|118431907|ref|NP_148663.2|   5.46e-28   4-102   HxlR-like  
gi|118431924|ref|NP_148695.2|   0.000000000000174   8-67   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|14600381|ref|NP_146895.1|   8.09e-24   4-103   PadR-like  
gi|14600480|ref|NP_146995.1|   0.000000000264   25-91   MarR-like transcriptional regulators  
gi|14600602|ref|NP_147119.1|   4.2e-28   4-140   MarR-like transcriptional regulators  
gi|14600606|ref|NP_147123.1|   0.00000000000000577   24-85   PF1790-like  
gi|14600610|ref|NP_147127.1|   0.00000128   68-137   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|14600727|ref|NP_147248.1|   0.00000013   11-71   CAP C-terminal domain-like  
gi|14600918|ref|NP_147443.1|   0.000000819   8-91   ROK associated domain  
  0.0435   159-190   LexA repressor, N-terminal DNA-binding domain  
gi|14600993|ref|NP_147519.1|   0.0000194   132-195   PSPTO2686-like  
  0.0436   35-85   Penicillinase repressor  
gi|14601043|ref|NP_147569.1|   9.79e-56   1-92   F93-like  
gi|14601178|ref|NP_147710.1|   9.1e-53   3-152   Rps19E-like  
gi|14601575|ref|NP_148115.1|   0.00000000135   248-303   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|14602047|ref|NP_148593.1|   0.0000000000607   23-102   PF1790-like  
gi|14602087|ref|NP_148634.1|   0.0000141   43-90   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|14602108|ref|NP_148656.1|   0.00000000000277   90-143   MarR-like transcriptional regulators  
 
Weak hits:
gi|118430908|ref|NP_147005.2|   0.000186   16-83   Cell cycle transcription factor e2f-dp  
gi|118430915|ref|NP_147017.2|   0.00422   7-47   PF1790-like  
gi|118431059|ref|NP_147255.2|   0.00181   56-122   TrmB-like  
gi|118431099|ref|NP_147314.2|   0.000611   70-117   CAP C-terminal domain-like  
gi|118431443|ref|YP_874891.1|   0.0168   9-73   GntR-like transcriptional regulators  
gi|118431586|ref|YP_874913.1|   0.00177   23-68   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|118431590|ref|NP_148164.2|   0.000515   10-89   MarR-like transcriptional regulators  
gi|118431832|ref|NP_148546.2|   0.0068   141-191   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|118431888|ref|YP_874948.1|   0.000332   14-68   DNA-binding protein Mj223  
gi|14600914|ref|NP_147439.1|   0.0044   41-91   PH0730 N-terminal domain-like  
gi|14601165|ref|NP_147694.1|   0.00272   15-82   GntR-like transcriptional regulators  
gi|14601483|ref|NP_148021.1|   0.0221   210-261   Forkhead DNA-binding domain  
gi|14601519|ref|NP_148059.1|   0.0413   25-80   Z-DNA binding domain  

Ignicoccus hospitalis KIN4/I has 27 significant domains in 27 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|156936809|ref|YP_001434605.1|   7.16e-18   5-101   MarR-like transcriptional regulators  
gi|156936894|ref|YP_001434690.1|   2.7e-18   43-127   HxlR-like  
gi|156936917|ref|YP_001434713.1|   0.0000000000000125   23-83   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|156936988|ref|YP_001434784.1|   0.000000448   57-111   MarR-like transcriptional regulators  
gi|156937008|ref|YP_001434804.1|   0.0000000000286   5-73   RPO3F domain-like  
gi|156937045|ref|YP_001434841.1|   4.22e-25   295-398   Helicase DNA-binding domain  
gi|156937078|ref|YP_001434874.1|   2.12e-52   3-152   Rps19E-like  
gi|156937089|ref|YP_001434885.1|   0.00000000000019   190-269   Methionine aminopeptidase, insert domain  
gi|156937288|ref|YP_001435084.1|   1.14e-16   7-67   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|156937495|ref|YP_001435291.1|   0.00000000000087   12-124   Iron-dependent repressor protein  
gi|156937499|ref|YP_001435295.1|   1.69e-16   7-67   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|156937503|ref|YP_001435299.1|   0.0000000033   3-101   MarR-like transcriptional regulators  
gi|156937543|ref|YP_001435339.1|   0.0000413   322-392   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|156937621|ref|YP_001435417.1|   2.34e-33   2-97   PF0610-like  
gi|156937632|ref|YP_001435428.1|   0.000000889   2-62   Lrp/AsnC-like transcriptional regulator N-terminal domain  
  0.00136   190-234   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|156937651|ref|YP_001435447.1|   5.92e-20   13-96   PadR-like  
gi|156937675|ref|YP_001435471.1|   0.000000000308   3-87   MarR-like transcriptional regulators  
gi|156937745|ref|YP_001435541.1|   0.00000000389   4-74   MarR-like transcriptional regulators  
gi|156937785|ref|YP_001435581.1|   0.000002   215-254   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|156937902|ref|YP_001435698.1|   0.00000436   151-211   PadR-like  
gi|156937912|ref|YP_001435708.1|   1.28e-20   10-88   Transcription factor E/IIe-alpha, N-terminal domain  
gi|156937930|ref|YP_001435726.1|   0.000000000786   132-184   F93-like  
gi|156938074|ref|YP_001435870.1|   0.0000000462   404-486   RecQ helicase DNA-binding domain-like  
gi|156938082|ref|YP_001435878.1|   1.9e-22   313-410   Helicase DNA-binding domain  
gi|156938083|ref|YP_001435879.1|   0.00000017   7-70   Helicase DNA-binding domain  
gi|156938180|ref|YP_001435976.1|   1.97e-18   2-89   Rio2 serine protein kinase N-terminal domain  
gi|156938213|ref|YP_001436009.1|   0.00000000000000588   2-84   MarR-like transcriptional regulators  
 
Weak hits:
gi|156936821|ref|YP_001434617.1|   0.0428   43-89   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|156936876|ref|YP_001434672.1|   0.00739   783-873   TrmB-like  
gi|156936921|ref|YP_001434717.1|   0.000122   333-388   F93-like  
  0.00378   173-212   MarR-like transcriptional regulators  
  0.0171   39-98   MarR-like transcriptional regulators  
gi|156936986|ref|YP_001434782.1|   0.0189   776-811   TrmB-like  
gi|156937155|ref|YP_001434951.1|   0.000838   85-153   MarR-like transcriptional regulators  
gi|156938014|ref|YP_001435810.1|   0.000134   8-80   Lrp/AsnC-like transcriptional regulator N-terminal domain  

Thermosphaera aggregans DSM 11486 has 31 significant domains in 31 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|296241749|ref|YP_003649236.1|   2.04e-19   291-386   Helicase DNA-binding domain  
gi|296241871|ref|YP_003649358.1|   3.26e-26   312-417   Helicase DNA-binding domain  
gi|296241896|ref|YP_003649383.1|   0.000000000024   5-74   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|296241937|ref|YP_003649424.1|   5.17e-21   6-89   Rio2 serine protein kinase N-terminal domain  
gi|296242004|ref|YP_003649491.1|   0.0000000655   4-68   HxlR-like  
gi|296242019|ref|YP_003649506.1|   0.0000532   76-135   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|296242069|ref|YP_003649556.1|   0.0000000000408   412-498   RecQ helicase DNA-binding domain-like  
gi|296242105|ref|YP_003649592.1|   0.000000529   8-54   CAP C-terminal domain-like  
gi|296242140|ref|YP_003649627.1|   4.78e-20   10-136   PadR-like  
gi|296242230|ref|YP_003649717.1|   0.0000000000188   2-93   PF1790-like  
gi|296242235|ref|YP_003649722.1|   0.0000000000000239   12-120   MarR-like transcriptional regulators  
gi|296242237|ref|YP_003649724.1|   0.00000000009   9-69   Rps19E-like  
gi|296242247|ref|YP_003649734.1|   0.00000787   21-100   TrmB-like  
gi|296242261|ref|YP_003649748.1|   0.000000000000652   3-63   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|296242326|ref|YP_003649813.1|   8.1e-16   3-63   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|296242383|ref|YP_003649870.1|   0.0000000463   15-69   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|296242443|ref|YP_003649930.1|   0.0000000000872   6-103   PadR-like  
gi|296242447|ref|YP_003649934.1|   0.000000718   5-56   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|296242454|ref|YP_003649941.1|   0.0000000000000238   241-320   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|296242495|ref|YP_003649982.1|   0.0000000391   29-102   HxlR-like  
gi|296242543|ref|YP_003650030.1|   0.000000154   138-195   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|296242544|ref|YP_003650031.1|   0.00000000042   142-207   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|296242638|ref|YP_003650125.1|   0.00000000000752   4-85   Archaeal DNA-binding protein  
gi|296242650|ref|YP_003650137.1|   1.06e-23   52-128   ArsR-like transcriptional regulators  
gi|296242666|ref|YP_003650153.1|   5.65e-50   3-151   Rps19E-like  
gi|296242725|ref|YP_003650212.1|   0.000000908   8-78   Transcriptional regulator IclR, N-terminal domain  
gi|296242830|ref|YP_003650317.1|   6.12e-29   4-105   PF0610-like  
gi|296242962|ref|YP_003650449.1|   0.00000258   201-279   Methionine aminopeptidase, insert domain  
gi|296243019|ref|YP_003650506.1|   0.0000462   17-89   Transcription factor E/IIe-alpha, N-terminal domain  
gi|296243053|ref|YP_003650540.1|   0.0000462   15-65   TrmB-like  
gi|296243078|ref|YP_003650565.1|   0.00000000000607   7-63   DNA-binding protein Mj223  
 
Weak hits:
gi|296241761|ref|YP_003649248.1|   0.000313   310-358   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|296241813|ref|YP_003649300.1|   0.0245   157-204   Transcription factor E/IIe-alpha, N-terminal domain  
gi|296241864|ref|YP_003649351.1|   0.0204   44-91   Transcription factor E/IIe-alpha, N-terminal domain  
gi|296241922|ref|YP_003649409.1|   0.00711   228-271   CodY HTH domain  
gi|296242034|ref|YP_003649521.1|   0.0143   16-91   Plant O-methyltransferase, N-terminal domain  

Staphylothermus hellenicus DSM 12710 has 36 significant domains in 36 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|297526029|ref|YP_003668053.1|   9.11e-24   293-389   Helicase DNA-binding domain  
gi|297526097|ref|YP_003668121.1|   0.0000263   7-66   Hypothetical protein PH1932  
gi|297526284|ref|YP_003668308.1|   9.52e-30   4-106   PF0610-like  
gi|297526294|ref|YP_003668318.1|   0.000011   128-224   Transcription factor E/IIe-alpha, N-terminal domain  
gi|297526361|ref|YP_003668385.1|   0.00000000936   432-546   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|297526384|ref|YP_003668408.1|   0.0000000000218   303-374   Z-DNA binding domain  
gi|297526408|ref|YP_003668432.1|   0.0000000153   5-59   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|297526420|ref|YP_003668444.1|   0.000015   75-139   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|297526450|ref|YP_003668474.1|   0.000000000251   19-87   F93-like  
gi|297526461|ref|YP_003668485.1|   0.000000000267   4-78   ArsR-like transcriptional regulators  
gi|297526524|ref|YP_003668548.1|   0.000000000000101   15-95   PadR-like  
gi|297526541|ref|YP_003668565.1|   7.39e-16   4-124   N-terminal domain of molybdate-dependent transcriptional regulator ModE  
gi|297526562|ref|YP_003668586.1|   0.00000000839   11-83   Helicase DNA-binding domain  
gi|297526610|ref|YP_003668634.1|   1.58e-16   423-511   RecQ helicase DNA-binding domain-like  
gi|297526628|ref|YP_003668652.1|   0.00000000012   7-67   MarR-like transcriptional regulators  
gi|297526630|ref|YP_003668654.1|   0.000000000000627   11-68   Iron-dependent repressor protein  
gi|297526639|ref|YP_003668663.1|   0.00000000105   369-429   PadR-like  
gi|297526640|ref|YP_003668664.1|   0.00000000000000143   7-68   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|297526653|ref|YP_003668677.1|   0.000000859   19-96   Z-DNA binding domain  
gi|297526722|ref|YP_003668746.1|   0.00000000172   8-105   MarR-like transcriptional regulators  
gi|297526759|ref|YP_003668783.1|   5.6e-20   1-62   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|297526776|ref|YP_003668800.1|   0.000000000000008   8-64   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|297526917|ref|YP_003668941.1|   0.0000000539   24-108   PF1790-like  
gi|297526946|ref|YP_003668970.1|   0.000000000832   10-56   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|297526987|ref|YP_003669011.1|   7.8e-16   9-102   Replication terminator protein (RTP)  
gi|297527017|ref|YP_003669041.1|   0.0000000000455   10-84   ScpB/YpuH-like  
gi|297527040|ref|YP_003669064.1|   0.00000000000351   9-74   Transcriptional regulator IclR, N-terminal domain  
gi|297527130|ref|YP_003669154.1|   2.33e-18   11-93   Rio2 serine protein kinase N-terminal domain  
gi|297527131|ref|YP_003669155.1|   5.36e-17   31-105   PF1790-like  
gi|297527177|ref|YP_003669201.1|   0.000000000504   3-66   DNA-binding protein Mj223  
gi|297527201|ref|YP_003669225.1|   2.36e-19   37-119   ArsR-like transcriptional regulators  
gi|297527207|ref|YP_003669231.1|   0.000000000101   2-64   Hypothetical protein PH1932  
gi|297527208|ref|YP_003669232.1|   2.27e-29   319-424   Helicase DNA-binding domain  
gi|297527357|ref|YP_003669381.1|   2.26e-54   2-152   Rps19E-like  
gi|297527510|ref|YP_003669534.1|   0.0000000000127   22-101   Transcription factor E/IIe-alpha, N-terminal domain  
gi|297527538|ref|YP_003669562.1|   0.000000000476   199-276   Methionine aminopeptidase, insert domain  
 
Weak hits:
gi|297526062|ref|YP_003668086.1|   0.00018   3-46   PadR-like  
gi|297526132|ref|YP_003668156.1|   0.00151   121-188   ArsR-like transcriptional regulators  
gi|297526133|ref|YP_003668157.1|   0.000816   95-178   Archaeal DNA-binding protein  
gi|297526281|ref|YP_003668305.1|   0.0224   40-94   Penicillinase repressor  
gi|297526305|ref|YP_003668329.1|   0.000635   26-87   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|297526934|ref|YP_003668958.1|   0.0908   9-52   MarR-like transcriptional regulators  
gi|297527059|ref|YP_003669083.1|   0.000488   4-40   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|297527149|ref|YP_003669173.1|   0.00143   215-259   Z-DNA binding domain  
gi|297527498|ref|YP_003669522.1|   0.0231   34-71   CAP C-terminal domain-like  
gi|297527536|ref|YP_003669560.1|   0.00435   21-82   PF0610-like  
gi|297527563|ref|YP_003669587.1|   0.000272   8-65   MarR-like transcriptional regulators  

Staphylothermus marinus F1 has 38 significant domains in 38 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|126464930|ref|YP_001040039.1|   0.0000000000000752   16-69   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|126464960|ref|YP_001040069.1|   2.51e-20   1-62   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|126464998|ref|YP_001040107.1|   0.000000000324   7-104   MarR-like transcriptional regulators  
gi|126465076|ref|YP_001040185.1|   0.00000111   20-80   Z-DNA binding domain  
gi|126465096|ref|YP_001040205.1|   0.00000000000000149   7-68   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|126465097|ref|YP_001040206.1|   0.000000000713   372-428   PadR-like  
gi|126465106|ref|YP_001040215.1|   0.000000000000364   11-68   Iron-dependent repressor protein  
gi|126465108|ref|YP_001040217.1|   0.00000000000922   7-67   MarR-like transcriptional regulators  
gi|126465121|ref|YP_001040230.1|   4.52e-17   416-504   RecQ helicase DNA-binding domain-like  
gi|126465169|ref|YP_001040278.1|   0.00000000755   11-100   Plant O-methyltransferase, N-terminal domain  
gi|126465191|ref|YP_001040300.1|   1.74e-16   9-97   N-terminal domain of molybdate-dependent transcriptional regulator ModE  
gi|126465209|ref|YP_001040318.1|   0.00000000000013   15-97   PadR-like  
gi|126465231|ref|YP_001040340.1|   0.000000000000217   141-215   MarR-like transcriptional regulators  
gi|126465262|ref|YP_001040371.1|   0.0000000000564   5-88   F93-like  
gi|126465311|ref|YP_001040420.1|   0.00000000616   7-61   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|126465339|ref|YP_001040448.1|   0.000000000000198   270-343   HxlR-like  
gi|126465361|ref|YP_001040470.1|   0.00000000212   431-546   Hypothetical protein PH1932  
gi|126465423|ref|YP_001040532.1|   0.00000494   128-194   Transcription factor E/IIe-alpha, N-terminal domain  
gi|126465432|ref|YP_001040541.1|   1.66e-29   3-106   PF0610-like  
gi|126465473|ref|YP_001040582.1|   0.00000000000000506   22-97   PF1790-like  
gi|126465620|ref|YP_001040729.1|   0.0000421   12-69   Replication terminator protein (RTP)  
gi|126465658|ref|YP_001040767.1|   3.57e-25   5-109   PadR-like  
gi|126465661|ref|YP_001040770.1|   0.0000039   22-91   MarR-like transcriptional regulators  
gi|126465697|ref|YP_001040806.1|   1.9e-23   294-388   Helicase DNA-binding domain  
gi|126465791|ref|YP_001040900.1|   0.000000000803   199-276   Methionine aminopeptidase, insert domain  
gi|126465816|ref|YP_001040925.1|   0.000000000333   1-72   Transcription factor E/IIe-alpha, N-terminal domain  
gi|126465980|ref|YP_001041089.1|   1.56e-53   2-152   Rps19E-like  
gi|126466115|ref|YP_001041224.1|   1.41e-29   307-412   Helicase DNA-binding domain  
gi|126466116|ref|YP_001041225.1|   0.000000000317   2-64   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|126466142|ref|YP_001041251.1|   0.000000000167   3-67   DNA-binding protein Mj223  
gi|126466185|ref|YP_001041294.1|   8.33e-17   32-109   PF1790-like  
gi|126466186|ref|YP_001041295.1|   9.79e-17   8-90   Rio2 serine protein kinase N-terminal domain  
gi|126466277|ref|YP_001041386.1|   0.0000000000215   11-75   Archaeal DNA-binding protein  
gi|126466298|ref|YP_001041407.1|   0.000000000174   5-79   ScpB/YpuH-like  
gi|126466331|ref|YP_001041440.1|   7.79e-16   12-133   Replication terminator protein (RTP)  
gi|126466367|ref|YP_001041476.1|   0.000000000703   10-57   TrmB-like  
gi|126466396|ref|YP_001041505.1|   0.00000000493   3-101   DNA-binding protein Mj223  
gi|126466473|ref|YP_001041582.1|   0.00000111   110-181   PF1790-like  
 
Weak hits:
gi|126465298|ref|YP_001040407.1|   0.000104   64-132   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|126465412|ref|YP_001040521.1|   0.0231   26-81   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|126465435|ref|YP_001040544.1|   0.007   40-94   TrmB-like  
gi|126465766|ref|YP_001040875.1|   0.000363   15-71   MarR-like transcriptional regulators  
gi|126465793|ref|YP_001040902.1|   0.00734   31-82   PF0610-like  
gi|126465863|ref|YP_001040972.1|   0.0635   23-90   TrmB-like  
gi|126466167|ref|YP_001041276.1|   0.00347   214-258   Z-DNA binding domain  

Desulfurococcus fermentans DSM 16532 has 32 significant domains in 32 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|390937753|ref|YP_006401491.1|   2.45e-18   291-390   Helicase DNA-binding domain  
gi|390937775|ref|YP_006401513.1|   0.0000000000000269   298-365   Helicase DNA-binding domain  
gi|390937801|ref|YP_006401539.1|   3.54e-22   304-405   Helicase DNA-binding domain  
gi|390937803|ref|YP_006401541.1|   2.01e-18   31-113   ArsR-like transcriptional regulators  
gi|390937848|ref|YP_006401586.1|   2.73e-16   5-66   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|390937872|ref|YP_006401610.1|   4.28e-17   5-90   Rio2 serine protein kinase N-terminal domain  
gi|390937879|ref|YP_006401617.1|   0.0000000001   5-95   Penicillinase repressor  
gi|390938005|ref|YP_006401743.1|   0.000091   238-291   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|390938075|ref|YP_006401813.1|   3.14e-16   1-62   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|390938154|ref|YP_006401892.1|   0.0000000000041   9-68   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|390938175|ref|YP_006401913.1|   0.00000000161   188-247   Penicillinase repressor  
gi|390938195|ref|YP_006401933.1|   0.00000114   308-372   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|390938202|ref|YP_006401940.1|   0.000000000639   43-117   MarR-like transcriptional regulators  
gi|390938292|ref|YP_006402030.1|   6.07e-19   9-95   PadR-like  
gi|390938312|ref|YP_006402050.1|   0.00000000000165   7-98   DNA-binding protein Mj223  
gi|390938480|ref|YP_006402218.1|   0.0000000169   10-56   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|390938522|ref|YP_006402260.1|   0.00000000000022   413-501   RecQ helicase DNA-binding domain-like  
gi|390938580|ref|YP_006402318.1|   0.00000000435   6-72   Rps19E-like  
gi|390938582|ref|YP_006402320.1|   0.000000000000362   10-85   Iron-dependent repressor protein  
gi|390938590|ref|YP_006402328.1|   0.000000141   22-92   TrmB-like  
gi|390938609|ref|YP_006402347.1|   0.0000000000078   17-95   F93-like  
gi|390938613|ref|YP_006402351.1|   0.0000136   5-53   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|390938618|ref|YP_006402356.1|   6.43e-16   250-326   MarR-like transcriptional regulators  
gi|390938683|ref|YP_006402421.1|   0.00000000118   5-73   ArsR-like transcriptional regulators  
gi|390938716|ref|YP_006402454.1|   1.12e-27   2-103   PF0610-like  
gi|390938730|ref|YP_006402468.1|   0.000000001   136-207   TrmB-like  
gi|390938735|ref|YP_006402473.1|   0.000000939   136-196   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|390938745|ref|YP_006402483.1|   0.00000000000544   276-341   Helicase DNA-binding domain  
gi|390938892|ref|YP_006402630.1|   0.00000863   11-85   Hypothetical protein PH1932  
gi|390938894|ref|YP_006402632.1|   0.000000105   36-82   F93-like  
gi|390938936|ref|YP_006402674.1|   6.34e-50   2-151   Rps19E-like  
gi|390939046|ref|YP_006402784.1|   0.00000000517   198-272   Methionine aminopeptidase, insert domain  
 
Weak hits:
gi|390938043|ref|YP_006401781.1|   0.00176   74-137   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|390938059|ref|YP_006401797.1|   0.0674   9-74   MarR-like transcriptional regulators  
gi|390938483|ref|YP_006402221.1|   0.0227   8-54   Penicillinase repressor  
gi|390938628|ref|YP_006402366.1|   0.00326   15-83   Archaeal DNA-binding protein  
gi|390938676|ref|YP_006402414.1|   0.00796   12-49   Biotin repressor-like  
gi|390938705|ref|YP_006402443.1|   0.0716   30-81   CAP C-terminal domain-like  
gi|390938789|ref|YP_006402527.1|   0.0163   36-78   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|390939058|ref|YP_006402796.1|   0.0299   27-89   Transcription factor MotA, activation domain  
gi|390939070|ref|YP_006402808.1|   0.000744   2-70   Transcription factor E/IIe-alpha, N-terminal domain  

Desulfurococcus kamchatkensis 1221n has 30 significant domains in 30 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|218883336|ref|YP_002427718.1|   8.38e-17   5-90   Rio2 serine protein kinase N-terminal domain  
gi|218883343|ref|YP_002427725.1|   0.000000000071   6-96   MarR-like transcriptional regulators  
gi|218883493|ref|YP_002427875.1|   0.00001   237-291   CAP C-terminal domain-like  
gi|218883659|ref|YP_002428041.1|   0.00000000000298   9-68   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|218883742|ref|YP_002428124.1|   1.18e-16   1-62   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|218883784|ref|YP_002428166.1|   0.00000229   1-60   MarR-like transcriptional regulators  
gi|218883791|ref|YP_002428173.1|   0.000000247   313-373   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|218883807|ref|YP_002428189.1|   1.09e-18   12-142   PadR-like  
gi|218883861|ref|YP_002428243.1|   0.00000000000225   10-100   DNA-binding protein Mj223  
gi|218883957|ref|YP_002428339.1|   0.000000147   22-92   TrmB-like  
gi|218883965|ref|YP_002428347.1|   0.000000000000482   10-86   Iron-dependent repressor protein  
gi|218883967|ref|YP_002428349.1|   0.0000000461   2-63   Rps19E-like  
gi|218884027|ref|YP_002428409.1|   0.0000000000000163   417-505   RecQ helicase DNA-binding domain-like  
gi|218884075|ref|YP_002428457.1|   0.00000000804   12-59   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|218884090|ref|YP_002428472.1|   0.00000364   138-195   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|218884095|ref|YP_002428477.1|   0.000000000485   135-196   TrmB-like  
gi|218884120|ref|YP_002428502.1|   2.99e-28   7-111   PF0610-like  
gi|218884140|ref|YP_002428522.1|   0.00000000236   5-70   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|218884212|ref|YP_002428594.1|   7.81e-16   250-327   Transcription factor E/IIe-alpha, N-terminal domain  
gi|218884217|ref|YP_002428599.1|   0.0000136   5-53   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|218884221|ref|YP_002428603.1|   0.00000000000209   17-95   FUR-like  
gi|218884380|ref|YP_002428762.1|   0.0000121   8-82   Hypothetical protein PH1932  
gi|218884382|ref|YP_002428764.1|   0.0000000909   32-78   F93-like  
gi|218884425|ref|YP_002428807.1|   5.86e-50   2-151   Rps19E-like  
gi|218884432|ref|YP_002428814.1|   0.000000115   5-65   Transcriptional regulator IclR, N-terminal domain  
gi|218884520|ref|YP_002428902.1|   0.00000735   39-77   Transcriptional regulator IclR, N-terminal domain  
gi|218884550|ref|YP_002428932.1|   0.000000000843   200-274   Methionine aminopeptidase, insert domain  
gi|218884688|ref|YP_002429070.1|   1.36e-18   295-389   Helicase DNA-binding domain  
gi|218884711|ref|YP_002429093.1|   0.0000000000000269   298-365   Helicase DNA-binding domain  
gi|218884738|ref|YP_002429120.1|   2.58e-22   305-406   Helicase DNA-binding domain  
 
Weak hits:
gi|218883531|ref|YP_002427913.1|   0.00672   74-136   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|218883548|ref|YP_002427930.1|   0.00686   9-64   MarR-like transcriptional regulators  
gi|218884068|ref|YP_002428450.1|   0.0363   8-54   Penicillinase repressor  
gi|218884133|ref|YP_002428515.1|   0.00182   11-52   Biotin repressor-like  
gi|218884199|ref|YP_002428581.1|   0.000207   15-86   Archaeal DNA-binding protein  
gi|218884273|ref|YP_002428655.1|   0.0354   37-75   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|218884577|ref|YP_002428959.1|   0.000435   2-71   Transcription factor E/IIe-alpha, N-terminal domain  

Desulfurococcus mucosus DSM 2162 has 28 significant domains in 28 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|320100211|ref|YP_004175803.1|   4.68e-19   291-390   Helicase DNA-binding domain  
gi|320100317|ref|YP_004175909.1|   9.07e-26   302-404   Helicase DNA-binding domain  
gi|320100376|ref|YP_004175968.1|   0.00000000000000224   5-66   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|320100402|ref|YP_004175994.1|   8.17e-18   6-89   Rio2 serine protein kinase N-terminal domain  
gi|320100459|ref|YP_004176051.1|   0.000000000101   7-82   Penicillinase repressor  
gi|320100486|ref|YP_004176078.1|   0.00000000923   10-57   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|320100577|ref|YP_004176169.1|   0.000000000000654   10-84   Iron-dependent repressor protein  
gi|320100579|ref|YP_004176171.1|   0.0000000734   9-74   MarR-like transcriptional regulators  
gi|320100652|ref|YP_004176244.1|   0.00000000000000493   254-321   ArsR-like transcriptional regulators  
gi|320100660|ref|YP_004176252.1|   0.00000000000354   414-501   RecQ helicase DNA-binding domain-like  
gi|320100693|ref|YP_004176285.1|   0.000000019   22-95   TrmB-like  
gi|320100767|ref|YP_004176359.1|   0.0000000403   311-373   Transcriptional regulator IclR, N-terminal domain  
gi|320100797|ref|YP_004176389.1|   0.00000000000617   7-96   PF1790-like  
gi|320100815|ref|YP_004176407.1|   2.9e-19   10-96   PadR-like  
gi|320100871|ref|YP_004176463.1|   0.0000000000013   4-56   TrmB-like  
gi|320100949|ref|YP_004176541.1|   0.0000000000195   7-70   PF1790-like  
gi|320101024|ref|YP_004176616.1|   2.3e-16   8-69   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|320101054|ref|YP_004176646.1|   1.55e-29   4-104   PF0610-like  
gi|320101067|ref|YP_004176659.1|   0.0000899   14-51   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|320101074|ref|YP_004176666.1|   0.00000000117   2-80   PF1790-like  
gi|320101108|ref|YP_004176700.1|   0.00000000000415   6-104   FUR-like  
gi|320101113|ref|YP_004176705.1|   0.00000234   7-48   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|320101118|ref|YP_004176710.1|   0.0000000000000193   250-325   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|320101191|ref|YP_004176783.1|   0.000000000000885   147-214   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|320101280|ref|YP_004176872.1|   0.00000000669   36-86   F93-like  
gi|320101312|ref|YP_004176904.1|   3.4e-51   2-151   Rps19E-like  
gi|320101419|ref|YP_004177011.1|   0.000000000435   198-271   Methionine aminopeptidase, insert domain  
gi|320101440|ref|YP_004177032.1|   0.00000242   23-97   Transcription factor E/IIe-alpha, N-terminal domain  
 
Weak hits:
gi|320100278|ref|YP_004175870.1|   0.000517   158-206   GntR-like transcriptional regulators  
gi|320100320|ref|YP_004175912.1|   0.0109   43-84   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|320100479|ref|YP_004176071.1|   0.0698   8-55   Penicillinase repressor  
gi|320100547|ref|YP_004176139.1|   0.0109   36-134   MerB N-terminal domain-like  
gi|320101034|ref|YP_004176626.1|   0.00218   236-289   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|320101050|ref|YP_004176642.1|   0.0326   133-208   Plant O-methyltransferase, N-terminal domain  
gi|320101141|ref|YP_004176733.1|   0.00272   119-182   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|320101157|ref|YP_004176749.1|   0.00559   7-75   MarR-like transcriptional regulators  
gi|320101276|ref|YP_004176868.1|   0.000178   8-81   Hypothetical protein PH1932  

Metallosphaera cuprina Ar-4 has 56 significant domains in 53 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|330833868|ref|YP_004408596.1|   3.32e-24   286-385   Helicase DNA-binding domain  
gi|330833880|ref|YP_004408608.1|   0.0000817   176-235   Lrp/AsnC-like transcriptional regulator N-terminal domain  
  0.00744   4-64   Archaeal DNA-binding protein  
gi|330833941|ref|YP_004408669.1|   0.0000000000000859   9-94   DNA-binding protein Mj223  
gi|330833979|ref|YP_004408707.1|   0.0000000000409   16-108   TrmB-like  
gi|330834027|ref|YP_004408755.1|   0.0000000000000444   197-273   Methionine aminopeptidase, insert domain  
gi|330834029|ref|YP_004408757.1|   0.000000000141   2-103   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|330834038|ref|YP_004408766.1|   0.0000000000553   4-75   Heat-inducible transcription repressor HrcA, N-terminal domain  
gi|330834043|ref|YP_004408771.1|   0.0000000258   6-71   MarR-like transcriptional regulators  
gi|330834090|ref|YP_004408818.1|   0.000000000234   6-84   MarR-like transcriptional regulators  
gi|330834112|ref|YP_004408840.1|   1.35e-27   305-410   Helicase DNA-binding domain  
gi|330834118|ref|YP_004408846.1|   0.00000000189   7-59   MarR-like transcriptional regulators  
gi|330834125|ref|YP_004408853.1|   0.00000000000135   27-117   TrmB-like  
gi|330834136|ref|YP_004408864.1|   0.0000000000299   16-88   Iron-dependent repressor protein  
gi|330834178|ref|YP_004408906.1|   0.0000000000381   27-86   Hypothetical protein PH1932  
gi|330834192|ref|YP_004408920.1|   0.0000000000000139   11-71   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|330834354|ref|YP_004409082.1|   0.0000000000259   10-74   MarR-like transcriptional regulators  
gi|330834364|ref|YP_004409092.1|   0.000000000279   10-70   RPO3F domain-like  
gi|330834384|ref|YP_004409112.1|   0.000000011   27-90   Z-DNA binding domain  
gi|330834386|ref|YP_004409114.1|   0.0000000000336   27-88   PH0730 N-terminal domain-like  
gi|330834466|ref|YP_004409194.1|   4.54e-43   2-154   Rps19E-like  
gi|330834520|ref|YP_004409248.1|   0.000000000091   5-79   Archaeal DNA-binding protein  
gi|330834527|ref|YP_004409255.1|   3.34e-16   23-125   TrmB-like  
gi|330834529|ref|YP_004409257.1|   0.00000136   1-55   TrmB-like  
gi|330834608|ref|YP_004409336.1|   0.000000514   4-76   MarR-like transcriptional regulators  
gi|330834645|ref|YP_004409373.1|   0.0000000000000227   1-105   N-terminal domain of molybdate-dependent transcriptional regulator ModE  
gi|330834659|ref|YP_004409387.1|   0.0000000192   2-63   TrmB-like  
gi|330834699|ref|YP_004409427.1|   0.00000000000000391   25-120   TrmB-like  
gi|330834724|ref|YP_004409452.1|   3.94e-21   14-132   PadR-like  
gi|330834831|ref|YP_004409559.1|   4.1e-31   6-140   MarR-like transcriptional regulators  
gi|330834843|ref|YP_004409571.1|   0.0000000000819   253-323   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|330834869|ref|YP_004409597.1|   0.0000000396   194-259   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|330834878|ref|YP_004409606.1|   0.000000000101   3-60   Lrp/AsnC-like transcriptional regulator N-terminal domain  
  0.000000396   128-179   TrmB-like  
gi|330835010|ref|YP_004409738.1|   0.0000000106   138-205   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|330835027|ref|YP_004409755.1|   9.47e-22   7-91   ArsR-like transcriptional regulators  
gi|330835096|ref|YP_004409824.1|   9.97e-28   4-129   FUR-like  
gi|330835133|ref|YP_004409861.1|   0.000000000000236   1-59   Lrp/AsnC-like transcriptional regulator N-terminal domain  
  0.00000000177   125-203   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|330835146|ref|YP_004409874.1|   0.00000000338   12-84   ReutB4095-like  
gi|330835169|ref|YP_004409897.1|   0.0000000000347   1-60   Lrp/AsnC-like transcriptional regulator N-terminal domain  
  0.000000000343   125-181   Z-DNA binding domain  
gi|330835197|ref|YP_004409925.1|   2.78e-23   1-115   PadR-like  
gi|330835239|ref|YP_004409967.1|   0.00000000000000293   3-74   ArsR-like transcriptional regulators  
gi|330835241|ref|YP_004409969.1|   0.000000000552   4-57   PadR-like  
gi|330835265|ref|YP_004409993.1|   4.68e-17   5-66   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|330835278|ref|YP_004410006.1|   3.13e-20   282-376   Helicase DNA-binding domain  
gi|330835328|ref|YP_004410056.1|   0.0000000527   172-233   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|330835389|ref|YP_004410117.1|   8.91e-19   1-74   PadR-like  
gi|330835459|ref|YP_004410187.1|   0.000000000682   8-53   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|330835623|ref|YP_004410351.1|   0.00000359   5-81   Archaeal DNA-binding protein  
gi|330835662|ref|YP_004410390.1|   2.81e-29   10-107   HxlR-like  
gi|330835697|ref|YP_004410425.1|   0.0000163   6-92   MarR-like transcriptional regulators  
gi|330835701|ref|YP_004410429.1|   6.23e-18   7-89   ArsR-like transcriptional regulators  
gi|330835739|ref|YP_004410467.1|   0.0000000000943   1-96   MarR-like transcriptional regulators  
gi|330835765|ref|YP_004410493.1|   0.00000000000233   5-57   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|330835883|ref|YP_004410611.1|   1.47e-24   7-90   Transcription factor E/IIe-alpha, N-terminal domain  
 
Weak hits:
gi|330833940|ref|YP_004408668.1|   0.0028   51-97   RPO3F domain-like  
gi|330833971|ref|YP_004408699.1|   0.00159   126-178   Iron-dependent repressor protein  
gi|330834098|ref|YP_004408826.1|   0.000237   9-105   RPO3F domain-like  
gi|330834137|ref|YP_004408865.1|   0.00369   3-109   MarR-like transcriptional regulators  
gi|330834420|ref|YP_004409148.1|   0.00744   197-242   Z-DNA binding domain  
gi|330834643|ref|YP_004409371.1|   0.0101   2-27   MarR-like transcriptional regulators  
gi|330834716|ref|YP_004409444.1|   0.00394   361-434   RecQ helicase DNA-binding domain-like  
gi|330834721|ref|YP_004409449.1|   0.0201   416-494   HxlR-like  
gi|330835194|ref|YP_004409922.1|   0.0292   6-51   GntR-like transcriptional regulators  
gi|330835319|ref|YP_004410047.1|   0.00762   387-444   Lrp/AsnC-like transcriptional regulator N-terminal domain  

Metallosphaera sedula DSM 5348 has 73 significant domains in 71 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|146302786|ref|YP_001190102.1|   8.84e-28   286-385   Helicase DNA-binding domain  
gi|146302915|ref|YP_001190231.1|   0.00000000448   12-76   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|146302921|ref|YP_001190237.1|   0.000000291   14-93   ReutB4095-like  
gi|146302922|ref|YP_001190238.1|   0.0000000000000911   6-92   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|146302951|ref|YP_001190267.1|   0.0000000000021   5-57   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|146302977|ref|YP_001190293.1|   0.00000000118   1-97   Hypothetical protein PH1932  
gi|146303014|ref|YP_001190330.1|   4.69e-17   17-86   ArsR-like transcriptional regulators  
gi|146303018|ref|YP_001190334.1|   0.0000000816   6-92   MarR-like transcriptional regulators  
gi|146303050|ref|YP_001190366.1|   9.76e-31   10-108   HxlR-like  
gi|146303086|ref|YP_001190402.1|   0.000000105   3-69   Archaeal DNA-binding protein  
gi|146303277|ref|YP_001190593.1|   0.00000000332   8-53   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|146303280|ref|YP_001190596.1|   0.00000117   188-273   TrmB-like  
gi|146303348|ref|YP_001190664.1|   8.75e-25   6-98   F93-like  
gi|146303374|ref|YP_001190690.1|   0.0000000512   173-233   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|146303471|ref|YP_001190787.1|   6.64e-17   5-66   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|146303484|ref|YP_001190800.1|   5.71e-21   298-392   Helicase DNA-binding domain  
gi|146303498|ref|YP_001190814.1|   1.01e-17   16-106   PadR-like  
gi|146303500|ref|YP_001190816.1|   1.54e-16   1-74   PF1790-like  
gi|146303516|ref|YP_001190832.1|   5.44e-24   8-86   PF0610-like  
gi|146303550|ref|YP_001190866.1|   6.71e-28   4-129   FUR-like  
gi|146303580|ref|YP_001190896.1|   0.000000000000749   1-58   Lrp/AsnC-like transcriptional regulator N-terminal domain  
  0.00000000286   128-182   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|146303593|ref|YP_001190909.1|   0.000000011   15-88   ReutB4095-like  
gi|146303615|ref|YP_001190931.1|   0.000000000119   125-186   Z-DNA binding domain  
  0.000000000465   1-60   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|146303649|ref|YP_001190965.1|   6.07e-23   11-111   PadR-like  
gi|146303701|ref|YP_001191017.1|   0.0000341   17-60   F93-like  
gi|146303706|ref|YP_001191022.1|   5.82e-21   18-103   HxlR-like  
gi|146303750|ref|YP_001191066.1|   0.0000000117   11-76   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|146303781|ref|YP_001191097.1|   6.02e-24   4-92   ArsR-like transcriptional regulators  
gi|146303833|ref|YP_001191149.1|   0.000000000000032   8-76   GntR-like transcriptional regulators  
gi|146303896|ref|YP_001191212.1|   0.00000000000000406   4-71   GntR-like transcriptional regulators  
gi|146303914|ref|YP_001191230.1|   0.00000000183   170-233   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|146303959|ref|YP_001191275.1|   0.0000000102   218-277   TrmB-like  
gi|146303971|ref|YP_001191287.1|   0.000000000000492   4-66   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|146303978|ref|YP_001191294.1|   0.00000000000031   4-66   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|146303993|ref|YP_001191309.1|   0.00000000000000868   8-76   ArsR-like transcriptional regulators  
gi|146304026|ref|YP_001191342.1|   0.0000000000528   5-89   Archaeal DNA-binding protein  
gi|146304035|ref|YP_001191351.1|   0.0000000000141   6-83   Archaeal DNA-binding protein  
gi|146304036|ref|YP_001191352.1|   0.00000000026   252-324   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|146304046|ref|YP_001191362.1|   4.75e-31   5-138   MarR-like transcriptional regulators  
gi|146304104|ref|YP_001191420.1|   0.000000000745   16-85   HxlR-like  
  0.000341   140-214   HxlR-like  
gi|146304137|ref|YP_001191453.1|   2.55e-21   15-127   PadR-like  
gi|146304163|ref|YP_001191479.1|   0.00000000000000814   19-120   TrmB-like  
gi|146304203|ref|YP_001191519.1|   0.00000000000009   19-116   TrmB-like  
gi|146304215|ref|YP_001191531.1|   0.0000000000000979   1-105   N-terminal domain of molybdate-dependent transcriptional regulator ModE  
gi|146304224|ref|YP_001191540.1|   0.000000000233   2-85   F93-like  
gi|146304262|ref|YP_001191578.1|   0.00000000509   6-67   MarR-like transcriptional regulators  
gi|146304326|ref|YP_001191642.1|   0.00000000000000391   12-105   TrmB-like  
gi|146304329|ref|YP_001191645.1|   1.58e-16   23-123   TrmB-like  
gi|146304336|ref|YP_001191652.1|   0.000000000000458   5-84   Archaeal DNA-binding protein  
gi|146304387|ref|YP_001191703.1|   5.45e-44   3-154   Rps19E-like  
gi|146304467|ref|YP_001191783.1|   0.0000000000117   27-88   PH0730 N-terminal domain-like  
gi|146304469|ref|YP_001191785.1|   0.000000000851   21-85   PF1790-like  
gi|146304490|ref|YP_001191806.1|   0.000000000136   9-70   RPO3F domain-like  
gi|146304500|ref|YP_001191816.1|   0.00000000000709   11-78   MarR-like transcriptional regulators  
gi|146304704|ref|YP_001192020.1|   0.0000000000000214   10-71   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|146304718|ref|YP_001192034.1|   0.00000000000011   27-87   ROK associated domain  
gi|146304764|ref|YP_001192080.1|   0.0000000000504   12-89   Iron-dependent repressor protein  
gi|146304775|ref|YP_001192091.1|   0.000000000000683   27-122   TrmB-like  
gi|146304794|ref|YP_001192110.1|   2.31e-28   305-410   Helicase DNA-binding domain  
gi|146304795|ref|YP_001192111.1|   0.00000398   6-79   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|146304801|ref|YP_001192117.1|   0.00000000179   4-65   PF1790-like  
gi|146304813|ref|YP_001192129.1|   0.000000001   8-84   MarR-like transcriptional regulators  
gi|146304856|ref|YP_001192172.1|   0.0000000111   6-72   MarR-like transcriptional regulators  
gi|146304862|ref|YP_001192178.1|   0.0000000000537   4-75   Heat-inducible transcription repressor HrcA, N-terminal domain  
gi|146304871|ref|YP_001192187.1|   0.00000000000885   2-96   PadR-like  
gi|146304873|ref|YP_001192189.1|   0.00000000000000748   197-273   Methionine aminopeptidase, insert domain  
gi|146304922|ref|YP_001192238.1|   0.00000000000928   7-108   TrmB-like  
gi|146304942|ref|YP_001192258.1|   0.0000231   3-58   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|146304947|ref|YP_001192263.1|   0.0000146   16-66   Transcriptional regulator IclR, N-terminal domain  
gi|146304979|ref|YP_001192295.1|   0.000000000000129   8-105   DNA-binding protein Mj223  
gi|146305025|ref|YP_001192341.1|   7.86e-25   6-89   Transcription factor E/IIe-alpha, N-terminal domain  
 
Weak hits:
gi|146302798|ref|YP_001190114.1|   0.00299   176-234   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|146303736|ref|YP_001191052.1|   0.0188   64-118   CAP C-terminal domain-like  
gi|146303813|ref|YP_001191129.1|   0.0445   251-333   ArsR-like transcriptional regulators  
gi|146303824|ref|YP_001191140.1|   0.0259   233-309   Helicase DNA-binding domain  
gi|146303838|ref|YP_001191154.1|   0.00199   185-232   Z-DNA binding domain  
  0.0761   13-69   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|146303877|ref|YP_001191193.1|   0.000811   176-262   TrmB-like  
gi|146303920|ref|YP_001191236.1|   0.000148   151-211   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|146303941|ref|YP_001191257.1|   0.0769   330-362   CAP C-terminal domain-like  
gi|146304140|ref|YP_001191456.1|   0.000571   416-494   RecQ helicase DNA-binding domain-like  
gi|146304144|ref|YP_001191460.1|   0.0979   364-434   RecQ helicase DNA-binding domain-like  
gi|146304434|ref|YP_001191750.1|   0.00303   223-267   Z-DNA binding domain  
gi|146304763|ref|YP_001192079.1|   0.0467   3-61   MarR-like transcriptional regulators  
gi|146304805|ref|YP_001192121.1|   0.000243   1-102   RPO3F domain-like  
gi|146304921|ref|YP_001192237.1|   0.000112   4-66   MarR-like transcriptional regulators  
gi|146304930|ref|YP_001192246.1|   0.0223   132-185   Iron-dependent repressor protein  
gi|146304980|ref|YP_001192296.1|   0.00178   47-102   Lrp/AsnC-like transcriptional regulator N-terminal domain  

Acidianus hospitalis W1 has 74 significant domains in 71 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|332795694|ref|YP_004457194.1|   4.35e-19   282-376   Helicase DNA-binding domain  
gi|332795736|ref|YP_004457236.1|   4.34e-27   6-96   PadR-like  
gi|332795927|ref|YP_004457427.1|   0.00000101   30-122   MarR-like transcriptional regulators  
gi|332795946|ref|YP_004457446.1|   0.0000000000223   6-55   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|332795987|ref|YP_004457487.1|   0.000000758   193-263   ArsR-like transcriptional regulators  
gi|332795988|ref|YP_004457488.1|   0.00000000499   26-89   ArsR-like transcriptional regulators  
gi|332795997|ref|YP_004457497.1|   4.38e-17   5-95   MarR-like transcriptional regulators  
gi|332795999|ref|YP_004457499.1|   0.000000000000154   6-102   TrmB-like  
gi|332796010|ref|YP_004457510.1|   0.0000000000000058   10-75   GntR-like transcriptional regulators  
gi|332796072|ref|YP_004457572.1|   0.0000158   315-368   Helicase DNA-binding domain  
gi|332796116|ref|YP_004457616.1|   2.24e-16   2-61   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|332796189|ref|YP_004457689.1|   0.00000000636   4-94   MarR-like transcriptional regulators  
gi|332796193|ref|YP_004457693.1|   0.0000000000672   5-83   PF1790-like  
gi|332796207|ref|YP_004457707.1|   4.9e-25   302-402   Helicase DNA-binding domain  
gi|332796233|ref|YP_004457733.1|   0.000000000372   2-58   Iron-dependent repressor protein  
gi|332796245|ref|YP_004457745.1|   0.00000000000181   27-118   TrmB-like  
gi|332796257|ref|YP_004457757.1|   0.000000048   7-75   MarR-like transcriptional regulators  
gi|332796263|ref|YP_004457763.1|   0.00000000000856   4-76   Heat-inducible transcription repressor HrcA, N-terminal domain  
gi|332796274|ref|YP_004457774.1|   0.0000000000000286   197-274   Methionine aminopeptidase, insert domain  
gi|332796287|ref|YP_004457787.1|   0.0000000000000473   17-97   ArsR-like transcriptional regulators  
gi|332796291|ref|YP_004457791.1|   0.00000599   10-88   PH0730 N-terminal domain-like  
gi|332796389|ref|YP_004457889.1|   0.0000000000000264   12-88   DNA-binding protein Mj223  
gi|332796390|ref|YP_004457890.1|   0.0000124   47-105   PCI domain (PINT motif)  
gi|332796452|ref|YP_004457952.1|   0.00000202   3-62   Lrp/AsnC-like transcriptional regulator N-terminal domain  
  0.000038   194-236   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|332796464|ref|YP_004457964.1|   9.79e-25   286-385   Helicase DNA-binding domain  
gi|332796493|ref|YP_004457993.1|   2.98e-25   6-89   Transcription factor E/IIe-alpha, N-terminal domain  
gi|332796569|ref|YP_004458069.1|   0.00000000000327   4-57   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|332796586|ref|YP_004458086.1|   8.16e-18   1-103   N-terminal domain of molybdate-dependent transcriptional regulator ModE  
gi|332796591|ref|YP_004458091.1|   0.00000000000253   4-65   MarR-like transcriptional regulators  
gi|332796618|ref|YP_004458118.1|   0.0000000000000269   16-118   DNA-binding protein Mj223  
gi|332796636|ref|YP_004458136.1|   0.00000000101   6-88   Transcription factor E/IIe-alpha, N-terminal domain  
gi|332796657|ref|YP_004458157.1|   0.00000000000017   3-92   TrmB-like  
gi|332796721|ref|YP_004458221.1|   5.7e-24   4-113   MarR-like transcriptional regulators  
gi|332796744|ref|YP_004458244.1|   0.0000000844   1-86   LexA repressor, N-terminal DNA-binding domain  
gi|332796805|ref|YP_004458305.1|   0.000000000000377   25-89   Hypothetical protein PH1932  
gi|332796819|ref|YP_004458319.1|   0.00000000000000716   11-71   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|332796954|ref|YP_004458454.1|   0.000000000189   4-69   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|332796966|ref|YP_004458466.1|   1.65e-42   3-150   Rps19E-like  
gi|332797049|ref|YP_004458549.1|   0.0000000000976   27-88   PH0730 N-terminal domain-like  
gi|332797051|ref|YP_004458551.1|   0.000000000361   28-92   HxlR-like  
gi|332797073|ref|YP_004458573.1|   0.00000000000344   3-66   RPO3F domain-like  
gi|332797083|ref|YP_004458583.1|   0.00000000000155   10-76   MarR-like transcriptional regulators  
gi|332797125|ref|YP_004458625.1|   0.000000000000112   282-348   Helicase DNA-binding domain  
gi|332797136|ref|YP_004458636.1|   0.000000000487   6-71   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|332797174|ref|YP_004458674.1|   0.0000000000000554   5-90   Archaeal DNA-binding protein  
gi|332797176|ref|YP_004458676.1|   0.000000000000405   11-97   TrmB-like  
gi|332797183|ref|YP_004458683.1|   0.00000000000675   1-60   Lrp/AsnC-like transcriptional regulator N-terminal domain  
  0.00000000671   130-179   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|332797185|ref|YP_004458685.1|   0.0000000000233   135-201   CAP C-terminal domain-like  
gi|332797186|ref|YP_004458686.1|   6.52e-23   22-123   PadR-like  
gi|332797199|ref|YP_004458699.1|   3.67e-27   27-123   HxlR-like  
gi|332797204|ref|YP_004458704.1|   0.000000000618   6-66   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|332797228|ref|YP_004458728.1|   0.0000000546   9-63   Z-DNA binding domain  
gi|332797409|ref|YP_004458909.1|   0.00000527   20-117   Transcription factor E/IIe-alpha, N-terminal domain  
gi|332797422|ref|YP_004458922.1|   0.00000257   133-193   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|332797427|ref|YP_004458927.1|   0.00000215   152-220   MarR-like transcriptional regulators  
gi|332797465|ref|YP_004458965.1|   2.62e-16   40-134   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|332797474|ref|YP_004458974.1|   4.91e-22   3-91   ArsR-like transcriptional regulators  
gi|332797591|ref|YP_004459091.1|   0.00000000000607   2-69   ArsR-like transcriptional regulators  
gi|332797603|ref|YP_004459103.1|   3.55e-16   19-115   TrmB-like  
gi|332797604|ref|YP_004459104.1|   0.00000000000196   24-116   TrmB-like  
gi|332797614|ref|YP_004459114.1|   0.0000133   4-53   Z-DNA binding domain  
gi|332797636|ref|YP_004459136.1|   0.00000000000000183   17-116   TrmB-like  
gi|332797744|ref|YP_004459244.1|   0.000000000157   1-60   Lrp/AsnC-like transcriptional regulator N-terminal domain  
  0.00000802   126-227   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|332797784|ref|YP_004459284.1|   0.000000000068   418-499   RecQ helicase DNA-binding domain-like  
gi|332797808|ref|YP_004459308.1|   0.000000226   535-633   Transcriptional regulator IclR, N-terminal domain  
gi|332797816|ref|YP_004459316.1|   4.85e-18   5-66   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|332797918|ref|YP_004459418.1|   0.000000056   167-242   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|332797968|ref|YP_004459468.1|   1.37e-28   6-129   FUR-like  
gi|332797998|ref|YP_004459498.1|   7.44e-31   2-100   PF0610-like  
gi|332798012|ref|YP_004459512.1|   3.97e-19   1-77   Hypothetical protein PH1932  
gi|332798015|ref|YP_004459515.1|   4.43e-18   2-86   PadR-like  
 
Weak hits:
gi|332795867|ref|YP_004457367.1|   0.0015   5-41   DNA-binding protein Mj223  
gi|332796069|ref|YP_004457569.1|   0.0015   144-187   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|332796197|ref|YP_004457697.1|   0.00107   1-101   PadR-like  
gi|332796656|ref|YP_004458156.1|   0.00182   1-58   Z-DNA binding domain  
gi|332796666|ref|YP_004458166.1|   0.0126   134-178   Transcriptional regulator IclR, N-terminal domain  
gi|332797015|ref|YP_004458515.1|   0.00649   211-255   Z-DNA binding domain  
gi|332797057|ref|YP_004458557.1|   0.00116   43-93   C-terminal fragment of elongation factor SelB  
gi|332797173|ref|YP_004458673.1|   0.0952   8-103   CAP C-terminal domain-like  
gi|332797310|ref|YP_004458810.1|   0.000278   183-250   TrmB-like  
gi|332797338|ref|YP_004458838.1|   0.0241   308-365   CAP C-terminal domain-like  
gi|332797540|ref|YP_004459040.1|   0.000236   335-385   Transcriptional regulator IclR, N-terminal domain  
gi|332797792|ref|YP_004459292.1|   0.00181   327-399   LysR-like transcriptional regulators  

Sulfolobus tokodaii str. 7 has 94 significant domains in 90 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|15920291|ref|NP_375960.1|   0.0000000000253   114-174   Transcriptional regulator IclR, N-terminal domain  
  0.0000000362   1-59   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|15920337|ref|NP_376006.1|   0.00000000000116   15-91   F93-like  
gi|15920352|ref|NP_376021.1|   0.000000000000116   12-108   TrmB-like  
gi|15920372|ref|NP_376041.1|   0.000000000000281   4-56   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|15920414|ref|NP_376083.1|   0.0000000000000998   6-91   Rio2 serine protein kinase N-terminal domain  
gi|15920419|ref|NP_376088.1|   3.94e-17   7-91   Hypothetical protein PH1932  
gi|15920435|ref|NP_376104.1|   0.00000000000239   11-83   Archaeal DNA-binding protein  
gi|15920437|ref|NP_376106.1|   0.000000000000737   5-87   MarR-like transcriptional regulators  
gi|15920485|ref|NP_376154.1|   0.00000192   3-62   Lrp/AsnC-like transcriptional regulator N-terminal domain  
  0.0000128   192-234   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|15920497|ref|NP_376166.1|   5.03e-29   287-388   Helicase DNA-binding domain  
gi|15920509|ref|NP_376178.1|   5.35e-17   729-797   P4 origin-binding domain-like  
gi|15920533|ref|NP_376202.1|   1.2e-22   6-89   Transcription factor E/IIe-alpha, N-terminal domain  
gi|15920573|ref|NP_376242.1|   0.00000000000000827   18-109   DNA-binding protein Mj223  
gi|15920687|ref|NP_376356.1|   2.27e-30   307-413   Helicase DNA-binding domain  
gi|15920704|ref|NP_376373.1|   2.2e-20   3-65   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|15920808|ref|NP_376477.1|   0.0000000000789   420-502   RecQ helicase DNA-binding domain-like  
gi|15920856|ref|NP_376525.1|   0.00000000155   4-80   MarR-like transcriptional regulators  
gi|15920879|ref|NP_376548.1|   6.7e-16   10-96   Archaeal DNA-binding protein  
gi|15920928|ref|NP_376597.1|   0.000000000000814   4-69   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|15920950|ref|NP_376619.1|   0.0000000000146   4-70   ArsR-like transcriptional regulators  
gi|15920980|ref|NP_376649.1|   0.00000000000000519   17-95   TrmB-like  
gi|15920988|ref|NP_376657.1|   1.08e-25   13-124   PadR-like  
gi|15920989|ref|NP_376658.1|   5.91e-30   4-103   HxlR-like  
gi|15921000|ref|NP_376669.1|   0.00000000000000264   7-96   Archaeal DNA-binding protein  
gi|15921006|ref|NP_376675.1|   0.00000000014   8-92   PadR-like  
gi|15921037|ref|NP_376706.1|   0.000000000000177   2-83   MarR-like transcriptional regulators  
gi|15921043|ref|NP_376712.1|   3.9e-17   1-102   N-terminal domain of molybdate-dependent transcriptional regulator ModE  
gi|15921071|ref|NP_376740.1|   3.19e-16   19-118   TrmB-like  
gi|15921148|ref|NP_376817.1|   0.000000367   4-53   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|15921192|ref|NP_376861.1|   0.000000136   759-808   P4 origin-binding domain-like  
gi|15921222|ref|NP_376891.1|   0.0000000000000345   6-91   Archaeal DNA-binding protein  
gi|15921223|ref|NP_376892.1|   6.3e-16   5-92   TrmB-like  
gi|15921269|ref|NP_376938.1|   0.00000000000000346   1-59   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|15921294|ref|NP_376963.1|   0.0000000000000401   9-114   TrmB-like  
gi|15921311|ref|NP_376980.1|   0.00000000000281   49-109   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|15921315|ref|NP_376984.1|   1.57e-16   21-106   MarR-like transcriptional regulators  
gi|15921328|ref|NP_376997.1|   2.73e-24   18-105   ArsR-like transcriptional regulators  
gi|15921370|ref|NP_377039.1|   0.0000000000000348   1-59   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|15921419|ref|NP_377088.1|   0.0000000911   139-194   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|15921509|ref|NP_377178.1|   0.0000000000654   27-89   PH0730 N-terminal domain-like  
gi|15921511|ref|NP_377180.1|   0.0000000251   49-116   TrmB-like  
gi|15921534|ref|NP_377203.1|   0.00000000000696   5-69   RPO3F domain-like  
gi|15921574|ref|NP_377243.1|   0.000000463   14-60   CAP C-terminal domain-like  
gi|15921581|ref|NP_377250.1|   0.0000000196   14-89   Transcriptional regulator IclR, N-terminal domain  
gi|15921582|ref|NP_377251.1|   0.0000000000000911   6-92   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|15921588|ref|NP_377257.1|   0.00000059   4-60   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|15921597|ref|NP_377266.1|   0.0000000000000482   4-87   MarR-like transcriptional regulators  
gi|15921598|ref|NP_377267.1|   0.00000000358   10-89   TrmB-like  
gi|15921620|ref|NP_377289.1|   0.00000000672   29-103   Transcription factor MotA, activation domain  
gi|15921621|ref|NP_377290.1|   1.32e-16   12-120   MarR-like transcriptional regulators  
gi|15921663|ref|NP_377332.1|   5.96e-45   3-151   Rps19E-like  
gi|15921674|ref|NP_377343.1|   0.000000000611   3-54   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|15921694|ref|NP_377363.1|   0.0000000000237   4-77   Heat-inducible transcription repressor HrcA, N-terminal domain  
gi|15921705|ref|NP_377374.1|   0.0000000022   3-72   Transcriptional regulator IclR, N-terminal domain  
gi|15921708|ref|NP_377377.1|   0.0000000000000834   197-273   Methionine aminopeptidase, insert domain  
gi|15921765|ref|NP_377434.1|   0.0000000000000683   12-72   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|15921779|ref|NP_377448.1|   0.0000000000000724   23-83   Hypothetical protein PH1932  
gi|15921853|ref|NP_377522.1|   0.0000000000422   10-94   Archaeal DNA-binding protein  
gi|15921859|ref|NP_377528.1|   0.00000000000000937   27-111   Archaeal DNA-binding protein  
gi|15921882|ref|NP_377551.1|   0.0000000000254   151-226   Transcriptional regulator IclR, N-terminal domain  
gi|15921886|ref|NP_377555.1|   0.000000000258   1-60   Lrp/AsnC-like transcriptional regulator N-terminal domain  
  0.0000000369   132-180   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|15921904|ref|NP_377573.1|   0.000000000108   7-78   Archaeal DNA-binding protein  
gi|15921912|ref|NP_377581.1|   0.000000000345   1-60   Lrp/AsnC-like transcriptional regulator N-terminal domain  
  0.0000000122   131-176   TrmB-like  
gi|15921933|ref|NP_377602.1|   0.000000000347   3-96   TrmB-like  
gi|15922014|ref|NP_377683.1|   2.54e-30   8-142   MarR-like transcriptional regulators  
gi|15922021|ref|NP_377690.1|   0.00000000118   4-50   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|15922051|ref|NP_377720.1|   0.000000192   18-100   CAP C-terminal domain-like  
gi|15922084|ref|NP_377753.1|   7.16e-22   12-130   PadR-like  
gi|15922155|ref|NP_377824.1|   0.0000000000592   47-128   MarR-like transcriptional regulators  
gi|15922180|ref|NP_377849.1|   3.09e-17   18-121   TrmB-like  
gi|15922203|ref|NP_377872.1|   5.72e-18   4-94   TrmB-like  
gi|15922206|ref|NP_377875.1|   4.35e-17   24-126   TrmB-like  
gi|15922267|ref|NP_377936.1|   0.0000109   23-82   Penicillinase repressor  
gi|15922357|ref|NP_378026.1|   0.0000000000129   3-57   Iron-dependent repressor protein  
gi|15922368|ref|NP_378037.1|   0.00000000000000369   27-124   TrmB-like  
gi|15922424|ref|NP_378093.1|   0.0000892   1-102   PadR-like  
gi|15922441|ref|NP_378110.1|   2.98e-28   5-130   FUR-like  
gi|15922471|ref|NP_378140.1|   1.14e-30   4-102   PF0610-like  
gi|15922486|ref|NP_378155.1|   1.65e-19   3-84   ArsR-like transcriptional regulators  
gi|15922492|ref|NP_378161.1|   2.18e-20   283-379   Helicase DNA-binding domain  
gi|15922538|ref|NP_378207.1|   2.09e-25   14-103   PadR-like  
gi|15922563|ref|NP_378232.1|   0.0000000000299   10-108   Hypothetical protein PH1932  
gi|15922567|ref|NP_378236.1|   0.00000000408   16-91   Transcriptional regulator IclR, N-terminal domain  
gi|15922651|ref|NP_378320.1|   0.000000486   11-63   Z-DNA binding domain  
gi|15922667|ref|NP_378336.1|   0.000000236   1-83   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|15922704|ref|NP_378373.1|   0.0000000000273   172-244   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|15922719|ref|NP_378388.1|   5.74e-26   5-113   MarR-like transcriptional regulators  
gi|15922841|ref|NP_378510.1|   0.00000000000873   5-67   C-terminal domain of RPA32  
gi|15922849|ref|NP_378518.1|   0.0000000000013   23-92   MarR-like transcriptional regulators  
  0.000236   122-196   PF1790-like  
gi|15922895|ref|NP_378564.1|   4.04e-16   2-68   GntR-like transcriptional regulators  
 
Weak hits:
gi|15920228|ref|NP_375897.1|   0.0499   162-211   ArsR-like transcriptional regulators  
gi|15920343|ref|NP_376012.1|   0.0152   152-180   Z-DNA binding domain  
gi|15920431|ref|NP_376100.1|   0.00016   12-80   CAP C-terminal domain-like  
gi|15920512|ref|NP_376181.1|   0.0299   11-48   Arginine repressor (ArgR), N-terminal DNA-binding domain  
gi|15920574|ref|NP_376243.1|   0.000179   48-95   Transcription factor E/IIe-alpha, N-terminal domain  
gi|15920683|ref|NP_376352.1|   0.00235   493-545   Helicase DNA-binding domain  
gi|15920945|ref|NP_376614.1|   0.000319   12-81   CAP C-terminal domain-like  
gi|15921084|ref|NP_376753.1|   0.00581   11-64   TrmB-like  
gi|15921167|ref|NP_376836.1|   0.0436   102-146   Transcription factor E/IIe-alpha, N-terminal domain  
gi|15921331|ref|NP_377000.1|   0.00562   12-77   Arginine repressor (ArgR), N-terminal DNA-binding domain  
gi|15921400|ref|NP_377069.1|   0.0894   244-288   ROK associated domain  
gi|15921518|ref|NP_377187.1|   0.00284   47-97   Penicillinase repressor  
gi|15921557|ref|NP_377226.1|   0.00989   759-798   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|15921608|ref|NP_377277.1|   0.000133   649-705   CodY HTH domain  
gi|15921609|ref|NP_377278.1|   0.000985   102-145   MarR-like transcriptional regulators  
gi|15921750|ref|NP_377419.1|   0.00151   130-184   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|15921848|ref|NP_377517.1|   0.0599   13-59   Iron-dependent repressor protein  
gi|15922269|ref|NP_377938.1|   0.000116   25-80   Penicillinase repressor  
gi|15922332|ref|NP_378001.1|   0.000909   184-262   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|15922356|ref|NP_378025.1|   0.000718   4-108   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|15922409|ref|NP_378078.1|   0.00159   3-44   F112-like  
gi|15922509|ref|NP_378178.1|   0.000127   25-80   Penicillinase repressor  
gi|15922931|ref|NP_378600.1|   0.0172   33-86   Arginine repressor (ArgR), N-terminal DNA-binding domain  
gi|15922973|ref|NP_378642.1|   0.00133   144-202   MarR-like transcriptional regulators  

Sulfolobus islandicus Y.N.15.51 has 91 significant domains in 87 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|228288722|ref|YP_002841974.1|   0.00000173   3-47   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|228288725|ref|YP_002841977.1|   0.0000165   16-66   Transcriptional regulator IclR, N-terminal domain  
gi|228288739|ref|YP_002841991.1|   0.00000434   9-81   F93-like  
gi|228288748|ref|YP_002842000.1|   0.0000000682   669-743   YjcQ-like  
gi|228288760|ref|YP_002842012.1|   0.000000000000118   12-91   MarR-like transcriptional regulators  
gi|228288761|ref|YP_002842013.1|   0.00000000000000273   12-85   MarR-like transcriptional regulators  
gi|229580724|ref|YP_002839123.1|   1.29e-20   284-378   Helicase DNA-binding domain  
gi|229580780|ref|YP_002839179.1|   3.94e-29   5-129   FUR-like  
gi|229580799|ref|YP_002839198.1|   0.00000000475   5-76   MarR-like transcriptional regulators  
gi|229580804|ref|YP_002839203.1|   0.00000000418   8-87   MarR-like transcriptional regulators  
gi|229580926|ref|YP_002839325.1|   0.0000000169   36-105   MarR-like transcriptional regulators  
gi|229580930|ref|YP_002839329.1|   0.0000000000103   282-347   Helicase DNA-binding domain  
gi|229580942|ref|YP_002839341.1|   0.000000881   11-77   MarR-like transcriptional regulators  
gi|229580960|ref|YP_002839359.1|   0.0000000000674   1-60   Lrp/AsnC-like transcriptional regulator N-terminal domain  
  0.0000000228   132-179   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|229580992|ref|YP_002839391.1|   0.000000000133   2-85   Archaeal DNA-binding protein  
gi|229581086|ref|YP_002839485.1|   0.000000000000393   3-88   Archaeal DNA-binding protein  
gi|229581186|ref|YP_002839585.1|   0.000000000871   198-255   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|229581248|ref|YP_002839647.1|   8.4e-28   9-106   HxlR-like  
gi|229581316|ref|YP_002839715.1|   0.0000000686   1-99   Penicillinase repressor  
gi|229581363|ref|YP_002839762.1|   1.34e-23   15-123   F93-like  
gi|229581371|ref|YP_002839770.1|   0.00000000000048   28-119   TrmB-like  
gi|229581372|ref|YP_002839771.1|   6.55e-24   9-124   PadR-like  
gi|229581415|ref|YP_002839814.1|   0.00000000000019   197-274   Methionine aminopeptidase, insert domain  
gi|229581417|ref|YP_002839816.1|   0.00000000861   2-73   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|229581426|ref|YP_002839825.1|   0.00000000000992   4-80   Heat-inducible transcription repressor HrcA, N-terminal domain  
gi|229581432|ref|YP_002839831.1|   0.0000000796   7-75   MarR-like transcriptional regulators  
gi|229581461|ref|YP_002839860.1|   0.00000000000386   6-58   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|229581508|ref|YP_002839907.1|   4.71e-18   6-90   ArsR-like transcriptional regulators  
gi|229581516|ref|YP_002839915.1|   0.00000431   10-62   Z-DNA binding domain  
gi|229581549|ref|YP_002839948.1|   0.00000551   9-66   Penicillinase repressor  
gi|229581582|ref|YP_002839981.1|   0.00000519   6-65   Lrp/AsnC-like transcriptional regulator N-terminal domain  
  0.0000816   181-238   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|229581593|ref|YP_002839992.1|   2.54e-28   287-387   Helicase DNA-binding domain  
gi|229581603|ref|YP_002840002.1|   9.25e-26   3-88   Transcription factor E/IIe-alpha, N-terminal domain  
gi|229581688|ref|YP_002840087.1|   5.67e-49   3-152   Rps19E-like  
gi|229581701|ref|YP_002840100.1|   0.0000000062   6-52   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|229581756|ref|YP_002840155.1|   0.00000155   47-108   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|229581757|ref|YP_002840156.1|   0.0000000000135   10-103   DNA-binding protein Mj223  
gi|229581793|ref|YP_002840192.1|   0.0000000000011   19-108   TrmB-like  
gi|229581847|ref|YP_002840246.1|   0.000000000000923   18-86   PF1790-like  
gi|229581924|ref|YP_002840323.1|   0.0000000000000235   15-75   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|229581938|ref|YP_002840337.1|   0.000000000000546   17-83   Hypothetical protein PH1932  
gi|229581980|ref|YP_002840379.1|   0.0000000000000369   13-91   MarR-like transcriptional regulators  
gi|229582000|ref|YP_002840399.1|   0.000000000469   116-190   MarR-like transcriptional regulators  
gi|229582089|ref|YP_002840488.1|   0.00000545   2-59   ReutB4095-like  
gi|229582090|ref|YP_002840489.1|   3.13e-29   304-409   Helicase DNA-binding domain  
gi|229582126|ref|YP_002840525.1|   0.0000000273   35-99   Z-DNA binding domain  
gi|229582128|ref|YP_002840527.1|   0.0000000127   30-87   PH0730 N-terminal domain-like  
gi|229582192|ref|YP_002840591.1|   0.0000000000063   6-69   RPO3F domain-like  
gi|229582203|ref|YP_002840602.1|   0.0000000803   2-47   MarR-like transcriptional regulators  
gi|229582241|ref|YP_002840640.1|   2.59e-19   14-108   PadR-like  
gi|229582304|ref|YP_002840703.1|   0.000000000000043   2-86   MarR-like transcriptional regulators  
gi|229582308|ref|YP_002840707.1|   0.00000000000000177   1-103   N-terminal domain of molybdate-dependent transcriptional regulator ModE  
gi|229582319|ref|YP_002840718.1|   6.66e-33   22-151   MarR-like transcriptional regulators  
gi|229582334|ref|YP_002840733.1|   1.35e-16   17-113   TrmB-like  
gi|229582341|ref|YP_002840740.1|   2.42e-17   19-121   TrmB-like  
gi|229582344|ref|YP_002840743.1|   0.0000000000000331   10-78   TrmB-like  
gi|229582423|ref|YP_002840822.1|   0.000000000364   1-60   Lrp/AsnC-like transcriptional regulator N-terminal domain  
  0.00000000307   130-181   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|229582483|ref|YP_002840882.1|   0.00000123   30-114   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|229582572|ref|YP_002840971.1|   0.0000102   10-127   MarR-like transcriptional regulators  
gi|229582631|ref|YP_002841030.1|   0.0000000279   2-82   ArsR-like transcriptional regulators  
gi|229582662|ref|YP_002841061.1|   0.000000289   154-227   Penicillinase repressor  
gi|229582688|ref|YP_002841087.1|   0.00000000312   13-84   Transcriptional regulator IclR, N-terminal domain  
gi|229582756|ref|YP_002841155.1|   0.0000000156   10-62   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|229582797|ref|YP_002841196.1|   0.0000000000391   5-84   Archaeal DNA-binding protein  
gi|229582835|ref|YP_002841234.1|   0.000000000254   7-89   Archaeal DNA-binding protein  
gi|229582843|ref|YP_002841242.1|   0.0000000000000105   5-88   Archaeal DNA-binding protein  
gi|229582860|ref|YP_002841259.1|   0.000000000649   4-93   RPO3F domain-like  
gi|229582954|ref|YP_002841353.1|   0.00000000304   18-100   MarR-like transcriptional regulators  
gi|229582986|ref|YP_002841385.1|   6.98e-19   9-81   GntR-like transcriptional regulators  
gi|229583017|ref|YP_002841416.1|   0.0000000000000289   280-349   Helicase DNA-binding domain  
gi|229583042|ref|YP_002841441.1|   0.00000000000000163   2-88   GntR-like transcriptional regulators  
gi|229583050|ref|YP_002841449.1|   0.00000662   144-198   Hypothetical protein PH1932  
gi|229583052|ref|YP_002841451.1|   0.0000000000503   277-342   Helicase DNA-binding domain  
gi|229583144|ref|YP_002841543.1|   0.0000000000000862   7-67   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|229583174|ref|YP_002841573.1|   4.75e-18   6-67   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|229583283|ref|YP_002841682.1|   0.00000000907   425-507   RecQ helicase DNA-binding domain-like  
gi|229583295|ref|YP_002841694.1|   0.0000000000000379   15-97   TrmB-like  
gi|229583296|ref|YP_002841695.1|   1.17e-18   5-90   Archaeal DNA-binding protein  
gi|229583348|ref|YP_002841747.1|   4.7e-20   7-84   PadR-like  
gi|229583365|ref|YP_002841764.1|   1.02e-24   8-110   HxlR-like  
gi|229583398|ref|YP_002841797.1|   1.45e-24   5-91   ArsR-like transcriptional regulators  
gi|229583433|ref|YP_002841832.1|   0.000000000403   4-49   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|229583451|ref|YP_002841850.1|   0.000000000000106   3-69   RPO3F domain-like  
gi|229583503|ref|YP_002841902.1|   0.00000000948   1-59   Lrp/AsnC-like transcriptional regulator N-terminal domain  
  0.0000000577   127-177   TrmB-like  
gi|229583509|ref|YP_002841908.1|   0.00000000137   4-88   MarR-like transcriptional regulators  
gi|229583547|ref|YP_002841946.1|   2.99e-31   2-100   PF0610-like  
gi|229583563|ref|YP_002841962.1|   7.7e-19   2-81   Hypothetical protein PH1932  
 
Weak hits:
gi|228288741|ref|YP_002841993.1|   0.00504   2-48   ArsR-like transcriptional regulators  
gi|229580795|ref|YP_002839194.1|   0.00151   21-107   PadR-like  
gi|229580870|ref|YP_002839269.1|   0.00245   6-56   DNA-binding protein Mj223  
gi|229580871|ref|YP_002839270.1|   0.0816   103-143   C-terminal fragment of elongation factor SelB  
gi|229580920|ref|YP_002839319.1|   0.049   19-74   Vacuolar sorting protein domain  
gi|229581087|ref|YP_002839486.1|   0.0114   4-68   Penicillinase repressor  
gi|229581269|ref|YP_002839668.1|   0.000327   1-28   Archaeal DNA-binding protein  
gi|229581337|ref|YP_002839736.1|   0.000162   3-57   Penicillinase repressor  
gi|229581483|ref|YP_002839882.1|   0.0141   4-61   GntR-like transcriptional regulators  
gi|229581504|ref|YP_002839903.1|   0.000408   5-85   Rio2 serine protein kinase N-terminal domain  
gi|229581525|ref|YP_002839924.1|   0.0114   50-90   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|229581782|ref|YP_002840181.1|   0.00458   134-182   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|229581794|ref|YP_002840193.1|   0.00603   4-54   Dissimilatory sulfite reductase DsvD  
gi|229581909|ref|YP_002840308.1|   0.00173   134-192   Transcription factor E/IIe-alpha, N-terminal domain  
gi|229581979|ref|YP_002840378.1|   0.008   6-61   MarR-like transcriptional regulators  
gi|229582106|ref|YP_002840505.1|   0.00457   94-137   Iron-dependent repressor protein  
gi|229582120|ref|YP_002840519.1|   0.000555   45-96   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|229582163|ref|YP_002840562.1|   0.0444   212-256   Transcriptional regulator IclR, N-terminal domain  
gi|229582215|ref|YP_002840614.1|   0.00094   763-805   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|229582579|ref|YP_002840978.1|   0.00125   31-112   C-terminal fragment of elongation factor SelB  
gi|229582597|ref|YP_002840996.1|   0.000538   422-489   CAP C-terminal domain-like  
gi|229582732|ref|YP_002841131.1|   0.00151   248-337   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|229582935|ref|YP_002841334.1|   0.0016   230-309   DNA-binding protein Mj223  
gi|229582959|ref|YP_002841358.1|   0.00261   308-366   Cell cycle transcription factor e2f-dp  
gi|229583129|ref|YP_002841528.1|   0.00222   4-51   Lrp/AsnC-like transcriptional regulator N-terminal domain  
gi|229583371|ref|YP_002841770.1|   0.0272   92-145   Transcriptional regulator IclR, N-terminal domain  

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Select to display   Genome       Domains   Proteins
No Yes ALL   12536306 12536306
No Yes Homo sapiens 76_38 Human 739 706
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 207 193
No Yes Gorilla gorilla 76_3.1 Western gorilla 299 282
No Yes Pongo abelii 76_2 Sumatran orangutan 219 206
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 212 196
No Yes Papio anubis 76 Olive baboon 236 220
No Yes Macaca mulatta 76_1 Rhesus monkey 337 313
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 459 429
No Yes Otolemur garnettii 76_3 Small-eared galago 219 204
No Yes Microcebus murinus 76_1 Gray mouse lemur 158 150
No Yes Rattus norvegicus 76_5.0 Norway rat 232 217
No Yes Mus musculus 76_38 House mouse 502 463
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 160 147
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 213 196
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 223 207
No Yes Cavia porcellus 76_3 Domestic guinea pig 207 193
No Yes Oryctolagus cuniculus 76_2 Rabbit 220 206
No Yes Ochotona princeps 76 American pika 165 154
No Yes Tupaia belangeri 76 Northern tree shrew 129 119
No Yes Sus scrofa 76_10.2 Pig 229 216
No Yes Bos taurus 76_3.1 Cattle 241 224
No Yes Ovis aries 76_3.1 Sheep 230 216
No Yes Vicugna pacos 76_1 Alpaca 130 123
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 191 178
No Yes Mustela putorius furo 76_1.0 Domestic ferret 199 185
No Yes Ailuropoda melanoleuca 76_1 Giant panda 240 223
No Yes Canis familiaris 76_3.1 Dog 271 252
No Yes Felis catus 76_6.2 Domestic cat 216 201
No Yes Equus caballus 76_2 Horse 227 210
No Yes Myotis lucifugus 76_2.0 Little brown bat 223 206
No Yes Pteropus vampyrus 76_1 Large flying fox 198 184
No Yes Sorex araneus 76_1 European shrew 112 102
No Yes Erinaceus europaeus 76 Western European hedgehog 149 137
No Yes Procavia capensis 76_1 Cape rock hyrax 163 152
No Yes Loxodonta africana 76_3 African savanna elephant 303 278
No Yes Echinops telfairi 76 Small Madagascar hedgehog 164 152
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 244 229
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 106 98
No Yes Macropus eugenii 76_1.0 Tammar wallaby 168 158
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 215 201
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 215 201
No Yes Ornithorhynchus anatinus 76_5 Platypus 168 158
No Yes Saccoglossus kowalevskii v3.0   352 332
No Yes Petromyzon marinus 76_7.0 Sea lamprey 113 107
No Yes Meleagris gallopavo 76_2 Turkey 191 178
No Yes Gallus gallus 76_4 Chicken 191 177
No Yes Anas platyrhynchos 76_1.0 Mallard 173 159
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 184 171
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 184 170
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 216 199
No Yes Anolis carolinensis 76_2.0 Green anole 202 188
No Yes Xenopus laevis African clawed frog 637 613
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 254 240
No Yes Latimeria chalumnae 76_1 Coelacanth 271 255
No Yes Lepisosteus oculatus 76 Spotted gar 280 259
No Yes Gadus morhua 76_1 Atlantic cod 248 235
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 304 284
No Yes Takifugu rubripes 76_4 Torafugu 703 675
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 311 296
No Yes Oryzias latipes 76_1 Japanese medaka 267 252
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 228 214
No Yes Poecilia formosa 76 Amazon molly 264 249
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 298 281
No Yes Astyanax mexicanus 76 Mexican tetra 255 245
No Yes Danio rerio 76_9 Zebrafish 456 431
No Yes Oikopleura dioica   110 104
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 168 155
No Yes Ciona intestinalis 76 Vase tunicate 129 123
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 211 196
No Yes Adineta vaga   273 259
No Yes Octopus bimaculoides 280   160 147
No Yes Crassostrea gigas 22 Pacific oyster 156 149
No Yes Lottia gigantea Owl limpet 142 135
No Yes Helobdella robusta   140 133
No Yes Capitella sp. I   183 174
No Yes Danaus plexippus OGS1.0 Monarch butterfly 95 89
No Yes Heliconius melpomene Postman butterfly 81 75
No Yes Bombyx mori Domestic silkworm 76 69
No Yes Nasonia vitripennis Jewel wasp 96 89
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 195 190
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 121 115
No Yes Linepithema humile v1.1 Argentine ant 98 90
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 96 92
No Yes Solenopsis invicta v.2.2.3 Red fire ant 89 85
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 126 120
No Yes Atta cephalotes v1.1   97 92
No Yes Camponotus floridanus v3.3 Florida carpenter ant 106 100
No Yes Lucilia cuprina Australian sheep blowfly 101 93
No Yes Drosophila grimshawi 1.3   116 110
No Yes Drosophila willistoni 1.3   98 93
No Yes Drosophila pseudoobscura 2.13   108 101
No Yes Drosophila persimilis 1.3   106 100
No Yes Drosophila suzukii   105 91
No Yes Drosophila yakuba 1.3   104 97
No Yes Drosophila simulans 1.3   85 81
No Yes Drosophila sechellia 1.3   143 135
No Yes Drosophila melanogaster 76_5 Fruit fly 206 199
No Yes Drosophila erecta 1.3   123 116
No Yes Drosophila ananassae 1.3   115 109
No Yes Drosophila virilis 1.2   102 96
No Yes Drosophila mojavensis 1.3   92 86
No Yes Megaselia scalaris 22   35 35
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 114 108
No Yes Culex pipiens quinquefasciatus Southern house mosquito 121 115
No Yes Anopheles darlingi 22 American malaria mosquito 82 76
No Yes Anopheles gambiae 49_3j African malaria mosquito 95 89
No Yes Tribolium castaneum 3.0 Red flour beetle 106 101
No Yes Pediculus humanus corporis (Early assembly) Human body louse 98 92
No Yes Acyrthosiphon pisum Pea aphid 94 88
No Yes Rhodnius prolixus 22   98 91
No Yes Daphnia pulex Common water flea 127 119
No Yes Strigamia maritima 22   119 109
No Yes Sarcoptes scabiei   74 69
No Yes Tetranychus urticae Two-spotted spider mite 106 100
No Yes Ixodes scapularis (Preliminary) Black-legged tick 89 85
No Yes Pristionchus pacificus   138 129
No Yes Meloidogyne incognita Southern root-knot nematode 99 90
No Yes Meloidogyne hapla   58 53
No Yes Onchocerca volvulus 22   88 81
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 117 110
No Yes Caenorhabditis japonica   192 185
No Yes Caenorhabditis brenneri   136 131
No Yes Caenorhabditis remanei   137 130
No Yes Caenorhabditis elegans 76_235 Roundworm 183 173
No Yes Caenorhabditis briggsae 2   112 105
No Yes Trichinella spiralis 22   71 68
No Yes Hymenolepis microstoma   98 93
No Yes Echinococcus multilocularis   88 85
No Yes Echinococcus granulosus   85 82
No Yes Taenia solium Pork tapeworm 93 88
No Yes Schistosoma mansoni   108 104
No Yes Mnemiopsis leidyi Sea walnut 84 80
No Yes Thelohanellus kitauei   54 51
No Yes Acropora digitifera v1.0   104 102
No Yes Nematostella vectensis 1.0 Starlet sea anemone 177 170
No Yes Hydra vulgaris   106 99
No Yes Amphimedon queenslandica   151 139
No Yes Trichoplax adhaerens   102 94
No Yes Proterospongia sp. ATCC 50818   84 77
No Yes Monosiga brevicollis   76 72
No Yes Sphaeroforma arctica JP610   72 67
No Yes Capsaspora owczarzaki ATCC 30864   80 66
No Yes Conidiobolus coronatus NRRL28638 v1.0   80 76
No Yes Mortierella verticillata NRRL 6337   78 71
No Yes Phycomyces blakesleeanus   89 86
No Yes Rhizopus oryzae RA 99-880   100 98
No Yes Mucor circinelloides   90 86
No Yes Rhizomucor miehei CAU432   89 84
No Yes Malassezia globosa CBS 7966   72 70
No Yes Sporisorium reilianum 22   55 51
No Yes Ustilago maydis   50 48
No Yes Mixia osmundae IAM 14324 v1.0   55 51
No Yes Cronartium quercuum f. sp. fusiforme G11 v1.0   56 53
No Yes Puccinia graminis f. sp. tritici CRL 75-36-700-3   55 52
No Yes Melampsora laricis-populina   50 47
No Yes Rhodotorula graminis WP1 v1.0   55 52
No Yes Sporobolomyces roseus IAM 13481   47 44
No Yes Microbotryum violaceum 22   58 55
No Yes Wallemia sebi v1.0   44 40
No Yes Sphaerobolus stellatus v1.0   93 90
No Yes Piloderma croceum F 1598 v1.0   87 83
No Yes Serpula lacrymans var. lacrymans S7.9   53 50
No Yes Coniophora puteana   72 67
No Yes Hydnomerulius pinastri v2.0   65 61
No Yes Paxillus rubicundulus Ve08.2h10 v1.0   63 59
No Yes Pisolithus microcarpus 441 v1.0   68 64
No Yes Pisolithus tinctorius Marx 270 v1.0   64 60
No Yes Scleroderma citrinum Foug A v1.0   74 67
No Yes Coprinopsis cinerea okayama7 130 v3   59 55
No Yes Pleurotus ostreatus Oyster mushroom 75 72
No Yes Amanita thiersii Skay4041 v1.0   61 57
No Yes Amanita muscaria Koide v1.0 Fly agaric 73 69
No Yes Galerina marginata v1.0   82 78
No Yes Hebeloma cylindrosporum h7 v2.0   67 63
No Yes Laccaria bicolor S238N-H82   79 71
No Yes Agaricus bisporus var. bisporus   69 66
No Yes Schizophyllum commune   66 62
No Yes Stereum hirsutum FP-91666 SS1 v1.0   80 77
No Yes Heterobasidion annosum   61 57
No Yes Gloeophyllum trabeumv1.0   72 68
No Yes Punctularia strigosozonata v1.0   62 58
No Yes Sebacina vermifera MAFF 305830 v1.0   60 57
No Yes Fomitiporia mediterranea v1.0   69 65
No Yes Tulasnella calospora AL13/4D v1.0   89 86
No Yes Postia placenta   88 81
No Yes Wolfiporia cocos MD-104 SS10 v1.0   70 66
No Yes Fomitopsis pinicolav1.0   68 64
No Yes Fomitopsis pinicola FP-58527 SS1 v3.0   68 65
No Yes Phanerochaete chrysosporium RP-78 2.1   56 53
No Yes Dichomitus squalens   60 55
No Yes Trametes versicolor v1.0   68 63
No Yes Tremella mesenterica Witches' butter 57 54
No Yes Daldinia eschscholzii EC12 v1.0   77 74
No Yes Apiospora montagnei NRRL 25634 v1.0   80 77
No Yes Magnaporthe poae ATCC 64411 22   54 51
No Yes Magnaporthe grisea 70-15   61 58
No Yes Podospora anserina   60 57
No Yes Sporotrichum thermophile ATCC 42464   58 55
No Yes Thielavia terrestris NRRL 8126   57 54
No Yes Chaetomium globosum CBS 148.51   58 55
No Yes Neurospora tetrasperma   56 53
No Yes Neurospora discreta FGSC 8579   54 51
No Yes Neurospora crassa OR74A   58 55
No Yes Cryphonectria parasitica Chestnut blight fungus 60 57
No Yes Verticillium albo-atrum VaMs.102   49 46
No Yes Verticillium dahliae VdLs.17   52 50
No Yes Acremonium alcalophilumv 1.0   56 53
No Yes Glomerella graminicola 22   66 63
No Yes Fusarium graminearum   59 55
No Yes Nectria haematococca mpVI   66 62
No Yes Fusarium oxysporum f. sp. lycopersici 4286   73 66
No Yes Fusarium verticillioides 7600   58 56
No Yes Trichoderma asperellum CBS 433.97 v1.0   58 55
No Yes Trichoderma atroviride   51 50
No Yes Trichoderma citrinoviride v1.0   57 54
No Yes Trichoderma reesei 1.2   51 48
No Yes Trichoderma virens Gv29-8   60 57
No Yes Trichoderma longibrachiatum ATCC 18648 v1.0   52 49
No Yes Trichoderma harzianum CBS 226.95 v1.0   63 60
No Yes Amorphotheca resinae v1.0 Creosote fungus 57 54
No Yes Botrytis cinerea B05.10   63 61
No Yes Sclerotinia sclerotiorum   51 48
No Yes Blumeria graminis 22   55 51
No Yes Didymella exigua CBS 183.55 v1.0   53 50
No Yes Leptosphaeria maculans 22   58 54
No Yes Setosphaeria turcica v1.0   71 67
No Yes Cochliobolus miyabeanus ATCC 44560 v1.0   68 64
No Yes Cochliobolus victoriae FI3 v1.0   71 67
No Yes Cochliobolus carbonum 26-R-13 v1.0   69 65
No Yes Cochliobolus heterostrophus Southern corn leaf blight pathogen 67 62
No Yes Alternaria brassicicola   54 51
No Yes Cochliobolus lunatus m118 v2.0   65 61
No Yes Pyrenophora teres f. teres 22   64 59
No Yes Pyrenophora tritici-repentis   66 61
No Yes Stagonospora nodorum   73 69
No Yes Mycosphaerella graminicola IPO323   56 53
No Yes Zasmidium cellare ATCC 36951 v1.0   90 87
No Yes Dothistroma septosporum   58 55
No Yes Septoria musiva v1.0   62 58
No Yes Mycosphaerella fijiensis CIRAD86   51 48
No Yes Aureobasidium pullulans var. subglaciale EXF-2481 v1.0   58 54
No Yes Paracoccidioides brasiliensis Pb18   48 45
No Yes Coccidioides posadasii RMSCC 3488   61 58
No Yes Coccidioides immitis RS   60 57
No Yes Ajellomyces dermatitidis SLH14081   52 49
No Yes Histoplasma capsulatum class NAmI strain WU24   49 45
No Yes Microsporum canis CBS 113480   63 59
No Yes Trichophyton equinum CBS 127.97   58 55
No Yes Trichophyton verrucosum HKI 0517   64 60
No Yes Arthroderma benhamiae CBS 112371   61 57
No Yes Trichophyton tonsurans CBS 112818   62 59
No Yes Trichophyton rubrum CBS 118892   60 57
No Yes Uncinocarpus reesii 1704   52 49
No Yes Aspergillus zonatus v1.0   104 97
No Yes Penicillium chrysogenum Wisconsin 54-1255   67 63
No Yes Penicillium chrysogenum v1.0   64 60
No Yes Aspergillus acidus v1.0   82 79
No Yes Aspergillus fumigatus Af293   65 62
No Yes Aspergillus brasiliensis v1.0   82 79
No Yes Aspergillus nidulans FGSC A4   69 66
No Yes Aspergillus sydowii v1.0   80 77
No Yes Aspergillus versicolor v1.0   79 76
No Yes Aspergillus glaucus   66 63
No Yes Aspergillus carbonarius ITEM 5010   77 74
No Yes Neosartorya fischeri NRRL 181   68 65
No Yes Aspergillus terreus NIH2624   74 71
No Yes Aspergillus tubingensis v1.0   76 73
No Yes Aspergillus wentii v1.0   64 61
No Yes Aspergillus oryzae RIB40   74 71
No Yes Aspergillus niger 22   75 72
No Yes Aspergillus niger ATCC 1015   56 53
No Yes Aspergillus flavus NRRL3357   76 74
No Yes Aspergillus clavatus NRRL 1   62 59
No Yes Penicillium marneffei ATCC 18224   77 73
No Yes Tuber melanosporum Mel28 22   54 51
No Yes Tuber melanosporum Vittad Perigord truffle 57 54
No Yes Hansenula polymorpha v2.0   37 35
No Yes Dekkera bruxellensis CBS 2499 v2.0   44 39
No Yes Pichia membranifaciensv1.0   43 38
No Yes Candida tanzawaensis NRRL Y-17324 v1.0   43 40
No Yes Candida dubliniensis CD36   48 45
No Yes Candida tropicalis MYA-3404   45 42
No Yes Candida parapsilosis   44 41
No Yes Candida albicans SC5314   46 43
No Yes Lodderomyces elongisporus NRRL YB-4239   42 40
No Yes Babjeviella inositovora NRRL Y-12698 v1.0   50 47
No Yes Pichia stipitis CBS 6054   47 44
No Yes Candida guilliermondii ATCC 6260   47 45
No Yes Hyphopichia burtonii NRRL Y-1933 v1.0   44 41
No Yes Debaromyces hansenii   51 48
No Yes Wickerhamomyces anomalus   50 47
No Yes Pichia pastoris GS115   48 44
No Yes Hanseniaspora valbyensis NRRL Y-1626 v1.1   26 25
No Yes Yarrowia lipolytica CLIB122   47 45
No Yes Candida lusitaniae ATCC 42720   40 37
No Yes Metschnikowia bicuspidata NRRL YB-4993 v1.0   43 40
No Yes Vanderwaltozyma polyspora DSM 70294   41 37
No Yes Candida glabrata CBS138   46 42
No Yes Kluyveromyces thermotolerans CBS 6340   44 41
No Yes Lachancea kluyveri   45 42
No Yes Kluyveromyces waltii   42 38
No Yes Ashbya gossypii ATCC 10895   43 40
No Yes Zygosaccharomyces rouxii   42 38
No Yes Saccharomyces mikatae MIT   46 43
No Yes Saccharomyces paradoxus MIT   48 44
No Yes Saccharomyces cerevisiae 76 Baker's yeast 50 45
No Yes Saccharomyces bayanus MIT   47 44
No Yes Kluyveromyces lactis   42 40
No Yes Schizosaccharomyces cryophilus OY26 22   51 47
No Yes Schizosaccharomyces octosporus yFS286   53 49
No Yes Schizosaccharomyces japonicus yFS275   50 47
No Yes Schizosaccharomyces pombe Fission yeast 53 49
No Yes Catenaria anguillulae PL171 v1.0   56 53
No Yes Allomyces macrogynus ATCC 38327   97 89
No Yes Spizellomyces punctatus DAOM BR117   69 64
No Yes Dictyostelium discoideum   66 60
No Yes Dictyostelium purpureum   62 56
No Yes Entamoeba dispar 1.2   45 42
No Yes Entamoeba invadens 1.2   52 49
No Yes Entamoeba histolytica 1   42 39
No Yes Selaginella moellendorffii   162 152
No Yes Pinus taeda Loblolly pine 279 259
No Yes Picea abies Norway spruce 129 125
No Yes Eucalyptus grandis v201 Rose gum 505 496
No Yes Theobroma cacao B97-61/B2 v1 Cacao 143 136
No Yes Gossypium raimondii v221   475 461
No Yes Citrus clementina v165   297 291
No Yes Citrus sinensis v154 Sweet orange 311 305
No Yes Thellungiella halophila v173   211 198
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 346 331
No Yes Capsella rubella v183   197 185
No Yes Arabidopsis lyrata Lyrate rockcress 255 241
No Yes Arabidopsis thaliana 10 Thale cress 285 267
No Yes Carica papaya Papaya 109 104
No Yes Medicago truncatula Barrel medic 614 593
No Yes Phaseolus vulgaris v186 French bean 284 277
No Yes Glycine max v109 Soybean 445 435
No Yes Cucumis sativus v122 Cucumber 192 181
No Yes Fragaria vesca Wild strawberry 149 139
No Yes Malus domestica v196 Apple 506 498
No Yes Prunus persica v139 Peach 206 201
No Yes Linum usitatissimum v200 Flax 288 276
No Yes Manihot esculenta v147 Cassava 242 237
No Yes Populus trichocarpa v156 Black cottonwood 297 290
No Yes Vitis vinifera Wine grape 145 136
No Yes Mimulus guttatus v140 Spotted monkey flower 144 136
No Yes Solanum lycopersicum v.2.3 Tomato 170 163
No Yes Solanum tuberosum Potato 285 277
No Yes Actinidia chinensis Hongyang   162 158
No Yes Aquilegia coerulea v195   251 237
No Yes Triticum urartu 22   149 141
No Yes Triticum aestivum 22 Bread wheat 428 414
No Yes Aegilops tauschii 22   163 151
No Yes Brachypodium distachyon Stiff brome 170 163
No Yes Oryza barthii 22 African wild rice 191 178
No Yes Oryza meridionalis 22   185 177
No Yes Oryza glumaepatula 22   197 184
No Yes Oryza glaberrima African rice 142 136
No Yes Oryza punctata 22   199 194
No Yes Oryza nivara 22   195 178
No Yes Oryza brachyantha 22 Malo sina 126 120
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 221 214
No Yes Oryza sativa v193 Rice 217 210
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 160 155
No Yes Panicum virgatum v202 Switchgrass 297 286
No Yes Setaria italica v164 Foxtail millet 201 191
No Yes Zea mays subsp. mays Maize 286 278
No Yes Zea mays v181 Maize 324 312
No Yes Sorghum bicolor Sorghum 182 171
No Yes Musa balbisiana Balbis banana 196 192
No Yes Musa acuminata 22 Wild Malaysian banana 211 203
No Yes Amborella trichopoda 22   109 104
No Yes Physcomitrella patens   129 120
No Yes Coccomyxa subellipsoidea sp. C-169 v2   51 46
No Yes Asterochloris sp. Cgr/DA1pho v1.0   45 41
No Yes Chlorella variabilis sp. NC64A   43 39
No Yes Chlorella vulgaris   53 49
No Yes Volvox carteri f. nagariensis   46 43
No Yes Volvox carteri v199   44 41
No Yes Chlamydomonas reinhardtii 4.0   46 42
No Yes Ostreococcus sp. RCC809   45 41
No Yes Ostreococcus lucimarinus CCE9901   46 42
No Yes Ostreococcus tauri   43 39
No Yes Bathycoccus prasinos   39 36
No Yes Micromonas sp. RCC299   51 46
No Yes Micromonas pusilla CCMP1545 v3.0   55 50
No Yes Cyanidioschyzon merolae strain 10D 22   45 44
No Yes Cyanidioschyzon merolae   46 45
No Yes Porphyridium purpureum 02_2012   59 52
No Yes Thecamonas trahens ATCC 50062   84 74
No Yes Bigelowiella natans CCMP2755 22   87 80
No Yes Giardia lamblia 2.3   16 14
No Yes Cyanophora paradoxa   44 42
No Yes Leishmania mexicana 2.4   29 28
No Yes Leishmania major strain Friedlin   31 29
No Yes Leishmania infantum JPCM5 2.4   31 29
No Yes Leishmania braziliensis MHOM/BR/75/M2904 2.4   30 28
No Yes Trypanosoma vivax   31 29
No Yes Trypanosoma cruzi strain CL Brener   24 24
No Yes Trypanosoma congolense 2.4   39 38
No Yes Trypanosoma brucei gambiense v4.1   32 31
No Yes Trypanosoma brucei TREU927 v4.1   32 31
No Yes Ectocarpus siliculosus   90 84
No Yes Aureococcus anophagefferens   59 55
No Yes Albugo laibachii 22   113 105
No Yes Pythium iwayamai DAOM BR242034 22   74 69
No Yes Pythium arrhenomanes ATCC 12531 22   74 70
No Yes Pythium ultimum v1.7-2   89 83
No Yes Pythium aphanidermatum DAOM BR444 22   81 72
No Yes Pythium irregulare DAOM BR486 22   85 79
No Yes Pythium vexans DAOM BR484 22   77 70
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 74 70
No Yes Phytophthora sojae 1.1   81 74
No Yes Phytophthora infestans T30-4   78 71
No Yes Phytophthora capsici   110 103
No Yes Hyaloperonospora arabidopsidis 22   61 60
No Yes Phaeodactylum tricornutumCCAP 1055/1   113 106
No Yes Fragilariopsis cylindrus   187 170
No Yes Thalassiosira pseudonana CCMP1335   143 139
No Yes Perkinsus marinus ATCC 50983   71 67
No Yes Paramecium tetraurelia   189 180
No Yes Tetrahymena thermophila SB210 1   50 45
No Yes Ichthyophthirius multifiliis strain G5   32 31
No Yes Cryptosporidium hominis   26 26
No Yes Cryptosporidium muris   32 32
No Yes Cryptosporidium parvum Iowa II   30 30
No Yes Neospora caninum   24 23
No Yes Toxoplasma gondii VEG   22 21
No Yes Toxoplasma gondii ME49   23 22
No Yes Toxoplasma gondii GT1   22 21
No Yes Babesia bovis T2Bo   57 53
No Yes Theileria parva   26 24
No Yes Theileria annulata   28 26
No Yes Plasmodium falciparum 3D7   22 21
No Yes Plasmodium vivax SaI-1 7.0   20 19
No Yes Plasmodium knowlesi strain H   21 20
No Yes Plasmodium yoelii ssp. yoelii 1   17 16
No Yes Plasmodium chabaudi   21 20
No Yes Plasmodium berghei ANKA   20 19
No Yes Symbiodinium minutum clade B1 v1.2   66 63
No Yes Naegleria gruberi   58 53
No Yes Trichomonas vaginalis   117 114
No Yes Guillardia theta CCMP2712 v1.0   63 58
No Yes Emiliania huxleyi CCMP1516   65 62
No Yes Acholeplasma laidlawii PG-8A   23 23
No Yes Thermobaculum terrenum ATCC BAA-798   63 61
No Yes Leptolyngbya sp. PCC 7376   37 36
No Yes Pseudanabaena sp. PCC 7367   37 35
No Yes Acaryochloris marina MBIC11017   85 84
No Yes Synechocystis sp. PCC 6803   36 35
No Yes Thermosynechococcus sp. NK55   25 24
No Yes Thermosynechococcus elongatus BP-1   23 22
No Yes Synechococcus sp. PCC 7502   38 37
No Yes Synechococcus sp. PCC 6312   40 39
No Yes Synechococcus sp. CC9311   17 16
No Yes Synechococcus elongatus PCC 7942   32 31
No Yes Prochlorococcus marinus str. MIT 9515   11 10
No Yes Microcoleus sp. PCC 7113   57 56
No Yes Trichodesmium erythraeum IMS101   26 25
No Yes Geitlerinema sp. PCC 7407   42 41
No Yes Cyanothece sp. PCC 8802   37 36
No Yes Gloeocapsa sp. PCC 7428   68 67
No Yes cyanobacterium UCYN-A   11 10
No Yes Halothece sp. PCC 7418   33 32
No Yes Microcystis aeruginosa NIES-843   33 32
No Yes Gloeobacter violaceus PCC 7421   69 66
No Yes Rivularia sp. PCC 7116   68 67
No Yes Calothrix sp. PCC 7507   44 43
No Yes Anabaena variabilis ATCC 29413   55 54
No Yes 'Nostoc azollae' 0708   25 24
No Yes Nostoc sp. PCC 7107   42 41
No Yes Nostoc punctiforme PCC 73102   61 60
No Yes Nostoc sp. PCC 7120   50 49
No Yes Nostoc sp. PCC 7524   47 46
No Yes Anabaena sp. 90   24 23
No Yes Candidatus Phytoplasma mali   2 2
No Yes Aster yellows witches'-broom phytoplasma AYWB   2 2
No Yes Onion yellows phytoplasma OY-M   2 2
No Yes Mesoplasma florum L1   10 9
No Yes Ureaplasma parvum serovar 3 str. ATCC 27815   7 6
No Yes Ureaplasma urealyticum serovar 10 str. ATCC 33699   6 5
No Yes Mycoplasma leachii 99/014/6   10 9
No Yes Mycoplasma mycoides subsp. capri LC str. 95010   9 8
No Yes Mycoplasma capricolum subsp. capricolum ATCC 27343   9 8
No Yes Mycoplasma haemocanis str. Illinois   1 1
No Yes Mycoplasma wenyonii str. Massachusetts   2 2
No Yes Mycoplasma suis KI3806   2 2
No Yes Mycoplasma crocodyli MP145   6 5
No Yes Mycoplasma conjunctivae HRC/581   3 3
No Yes Mycoplasma haemofelis Ohio2   1 1
No Yes Mycoplasma bovis HB0801   4 3
No Yes Mycoplasma penetrans HF-2   11 10
No Yes Mycoplasma putrefaciens KS1   6 5
No Yes Mycoplasma mobile 163K   6 5
No Yes Mycoplasma fermentans M64   11 10
No Yes Mycoplasma arthritidis 158L3-1   4 3
No Yes Mycoplasma agalactiae PG2   4 3
No Yes Mycoplasma synoviae 53   5 4
No Yes Mycoplasma pulmonis UAB CTIP   4 4
No Yes Mycoplasma pneumoniae 309   6 5
No Yes Mycoplasma hyorhinis GDL-1   5 4
No Yes Mycoplasma hyopneumoniae 168   4 3
No Yes Mycoplasma hominis ATCC 23114   4 3
No Yes Mycoplasma genitalium G37   6 5
No Yes Mycoplasma gallisepticum str. F   7 6
No Yes Conexibacter woesei DSM 14684   227 225
No Yes Cryptobacterium curtum DSM 15641   38 35
No Yes Eggerthella sp. YY7918   84 79
No Yes Eggerthella lenta DSM 2243   81 76
No Yes Slackia heliotrinireducens DSM 20476   79 71
No Yes Olsenella uli DSM 7084   60 58
No Yes Atopobium parvulum DSM 20469   36 34
No Yes Coriobacterium glomerans PW2   47 46
No Yes Rubrobacter xylanophilus DSM 9941   90 89
No Yes Ilumatobacter coccineus   81 79
No Yes Acidimicrobium ferrooxidans DSM 10331   41 41
No Yes Thermobispora bispora DSM 43833   107 103
No Yes Nakamurella multipartita DSM 44233   141 140
No Yes Acidothermus cellulolyticus 11B   42 41
No Yes Modestobacter marinus   129 127
No Yes Blastococcus saxobsidens DD2   94 93
No Yes Geodermatophilus obscurus DSM 43160   108 107
No Yes Kineococcus radiotolerans SRS30216   135 134
No Yes Catenulispora acidiphila DSM 44928   344 339
No Yes Stackebrandtia nassauensis DSM 44728   253 250
No Yes Frankia symbiont of Datisca glomerata   91 89
No Yes Frankia sp. EAN1pec   166 163
No Yes Frankia alni ACN14a   149 146
No Yes Thermobifida fusca YX   73 71
No Yes Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111   193 190
No Yes Thermomonospora curvata DSM 43183   128 125
No Yes Streptosporangium roseum DSM 43021   406 399
No Yes Kitasatospora setae KM-6054   250 245
No Yes Streptomyces coelicolor A3(2)   292 288
No Yes Streptomyces sp. PAMC26508   220 215
No Yes Streptomyces flavogriseus ATCC 33331   224 219
No Yes Streptomyces sp. SirexAA-E   228 221
No Yes Streptomyces griseus subsp. griseus NBRC 13350   232 229
No Yes Streptomyces bingchenggensis BCW-1   395 391
No Yes Streptomyces violaceusniger Tu 4113   369 359
No Yes Streptomyces avermitilis MA-4680   250 248
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488   253 245
No Yes Streptomyces scabiei 87.22   286 278
No Yes Streptomyces hygroscopicus subsp. jinggangensis 5008   302 299
No Yes Actinosynnema mirum DSM 43827   216 215
No Yes Saccharomonospora viridis DSM 43017   107 105
No Yes Pseudonocardia dioxanivorans CB1190   261 258
No Yes Saccharopolyspora erythraea NRRL 2338   272 270
No Yes Amycolatopsis mediterranei U32   388 383
No Yes Kribbella flavida DSM 17836   297 296
No Yes Nocardioides sp. JS614   123 121
No Yes Propionibacterium propionicum F0230a   70 68
No Yes Propionibacterium acnes SK137   42 41
No Yes Microlunatus phosphovorus NM-1   174 170
No Yes Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1   45 44
No Yes Salinispora arenicola CNS-205   125 122
No Yes Salinispora tropica CNB-440   110 109
No Yes Verrucosispora maris AB-18-032   176 174
No Yes Micromonospora sp. L5   191 190
No Yes Micromonospora aurantiaca ATCC 27029   179 178
No Yes Actinoplanes sp. N902-109   238 235
No Yes Actinoplanes sp. SE50/110   232 230
No Yes Actinoplanes missouriensis 431   258 254
No Yes Segniliparus rotundus DSM 44985   39 38
No Yes Tsukamurella paurometabola DSM 20162   117 114
No Yes Gordonia sp. KTR9   124 122
No Yes Gordonia polyisoprenivorans VH2   169 166
No Yes Gordonia bronchialis DSM 43247   127 126
No Yes Rhodococcus jostii RHA1   314 307
No Yes Rhodococcus equi 103S   152 150
No Yes Rhodococcus opacus B4   310 307
No Yes Rhodococcus erythropolis PR4   213 209
No Yes Nocardia cyriacigeorgica GUH-2   152 151
No Yes Nocardia farcinica IFM 10152   175 172
No Yes Amycolicicoccus subflavus DQS3-9A1   111 110
No Yes Mycobacterium massiliense str. GO 06   83 82
No Yes Mycobacterium abscessus ATCC 19977   129 128
No Yes Mycobacterium sp. JLS   149 147
No Yes Mycobacterium intracellulare ATCC 13950   94 92
No Yes Mycobacterium avium 104   82 80
No Yes Mycobacterium vanbaalenii PYR-1   148 145
No Yes Mycobacterium canettii CIPT 140010059   66 64
No Yes Mycobacterium africanum GM041182   65 63
No Yes Mycobacterium tuberculosis KZN 1435   66 64
No Yes Mycobacterium tuberculosis   67 65
No Yes Mycobacterium bovis BCG str. Pasteur 1173P2   67 65
No Yes Mycobacterium rhodesiae NBB3   124 122
No Yes Mycobacterium ulcerans Agy99   79 78
No Yes Mycobacterium gilvum PYR-GCK   124 122
No Yes Mycobacterium chubuense NBB4   126 124
No Yes Mycobacterium marinum M   92 90
No Yes Mycobacterium smegmatis str. MC2 155   232 227
No Yes Mycobacterium leprae Br4923   20 19
No Yes Corynebacterium resistens DSM 45100   36 35
No Yes Corynebacterium aurimucosum ATCC 700975   59 57
No Yes Corynebacterium kroppenstedtii DSM 44385   28 27
No Yes Corynebacterium efficiens YS-314   71 70
No Yes Corynebacterium ulcerans 0102   40 38
No Yes Corynebacterium urealyticum DSM 7109   30 29
No Yes Corynebacterium jeikeium K411   34 33
No Yes Corynebacterium variabile DSM 44702   63 62
No Yes Corynebacterium pseudotuberculosis 316   35 33
No Yes Corynebacterium glutamicum R   90 88
No Yes Corynebacterium diphtheriae NCTC 13129   39 38
No Yes Tropheryma whipplei TW08/27   4 4
No Yes Sanguibacter keddieii DSM 10542   110 109
No Yes Kytococcus sedentarius DSM 20547   55 54
No Yes Beutenbergia cavernae DSM 12333   140 138
No Yes Leifsonia xyli subsp. xyli str. CTCB07   50 49
No Yes Microbacterium testaceum StLB037   124 123
No Yes Clavibacter michiganensis subsp. michiganensis NCPPB 382   81 80
No Yes Jonesia denitrificans DSM 20603   57 56
No Yes Intrasporangium calvum DSM 43043   84 83
No Yes Brachybacterium faecium DSM 4810   81 81
No Yes Isoptericola variabilis 225   70 68
No Yes Xylanimonas cellulosilytica DSM 15894   72 71
No Yes Cellulomonas flavigena DSM 20109   92 91
No Yes Cellulomonas fimi ATCC 484   104 103
No Yes [Cellvibrio] gilvus ATCC 13127   85 84
No Yes Arthrobacter phenanthrenivorans Sphe3   145 144
No Yes Arthrobacter chlorophenolicus A6   151 150
No Yes Arthrobacter aurescens TC1   185 184
No Yes Arthrobacter arilaitensis Re117   126 125
No Yes Kocuria rhizophila DC2201   59 58
No Yes Rothia mucilaginosa DY-18   25 24
No Yes Rothia dentocariosa ATCC 17931   38 37
No Yes Arthrobacter sp. Rue61a   174 173
No Yes Arthrobacter sp. FB24   175 174
No Yes Renibacterium salmoninarum ATCC 33209   101 100
No Yes Micrococcus luteus NCTC 2665   43 43
No Yes Gardnerella vaginalis 409-05   14 14
No Yes Bifidobacterium longum subsp. longum JDM301   42 40
No Yes Bifidobacterium animalis subsp. lactis Bl-04   28 27
No Yes Bifidobacterium dentium Bd1   33 32
No Yes Bifidobacterium breve ACS-071-V-Sch8b   40 38
No Yes Bifidobacterium bifidum S17   32 31
No Yes Bifidobacterium adolescentis ATCC 15703   27 26
No Yes Arcanobacterium haemolyticum DSM 20595   31 30
No Yes Mobiluncus curtisii ATCC 43063   25 24
No Yes Actinomyces sp. F0330   62 61
No Yes Caldilinea aerophila DSM 14535 = NBRC 104270   59 56
No Yes Dehalococcoides ethenogenes 195   27 27
No Yes Dehalococcoides sp. BAV1   23 23
No Yes Dehalogenimonas lykanthroporepellens BL-DC-9   28 27
No Yes Anaerolinea thermophila UNI-1   49 46
No Yes Thermomicrobium roseum DSM 5159   44 42
No Yes Sphaerobacter thermophilus DSM 20745   57 55
No Yes Herpetosiphon aurantiacus DSM 785   77 75
No Yes Roseiflexus sp. RS-1   49 48
No Yes Roseiflexus castenholzii DSM 13941   53 52
No Yes Chloroflexus sp. MS-G   62 60
No Yes Chloroflexus sp. Y-400-fl   64 62
No Yes Chloroflexus aggregans DSM 9485   64 63
No Yes Chloroflexus aurantiacus J-10-fl   63 61
No Yes Truepera radiovictrix DSM 17093   50 49
No Yes Deinococcus gobiensis I-0   87 86
No Yes Deinococcus deserti VCD115   82 81
No Yes Deinococcus maricopensis DSM 21211   74 72
No Yes Deinococcus geothermalis DSM 11300   64 63
No Yes Deinococcus proteolyticus MRP   51 49
No Yes Deinococcus radiodurans R1   59 57
No Yes Oceanithermus profundus DSM 14977   39 38
No Yes Marinithermus hydrothermalis DSM 14884   40 39
No Yes Meiothermus silvanus DSM 9946   68 67
No Yes Meiothermus ruber DSM 1279   65 63
No Yes Thermus sp. CCB_US3_UF1   38 38
No Yes Thermus scotoductus SA-01   42 42
No Yes Thermus thermophilus HB27   36 35
No Yes Anaerococcus prevotii DSM 20548   41 40
No Yes Finegoldia magna ATCC 29328   36 33
No Yes Veillonella parvula DSM 2008   38 37
No Yes Megasphaera elsdenii DSM 20460   70 68
No Yes Acidaminococcus intestini RyC-MR95   72 71
No Yes Acidaminococcus fermentans DSM 20731   82 80
No Yes Megamonas hypermegale   54 52
No Yes Selenomonas sputigena ATCC 35185   38 37
No Yes Selenomonas ruminantium subsp. lactilytica TAM6421   76 70
No Yes Erysipelothrix rhusiopathiae str. Fujisawa   44 42
No Yes Natranaerobius thermophilus JW/NM-WN-LF   54 51
No Yes Symbiobacterium thermophilum IAM 14863   67 63
No Yes Clostridiales genomosp. BVAB3 str. UPII9-5   35 34
No Yes Clostridium clariflavum DSM 19732   58 57
No Yes Eubacterium siraeum   32 31
No Yes Clostridium cellulolyticum H10   57 56
No Yes Clostridium thermocellum ATCC 27405   51 50
No Yes Ethanoligenens harbinense YUAN-3   63 62
No Yes Faecalibacterium prausnitzii   60 59
No Yes Ruminococcus sp.   60 60
No Yes Ruminococcus bromii   30 29
No Yes Ruminococcus albus 7   54 52
No Yes Thermaerobacter marianensis DSM 12885   52 49
No Yes Sulfobacillus acidophilus DSM 10332   76 73
No Yes Oscillibacter valericigenes Sjm18-20   136 134
No Yes butyrate-producing bacterium SS3/4   73 72
No Yes butyrate-producing bacterium SM4/1   42 40
No Yes Candidatus Desulforudis audaxviator MP104C   32 30
No Yes Thermincola potens JR   59 57
No Yes Pelotomaculum thermopropionicum SI   52 50
No Yes Desulfosporosinus acidiphilus SJ4   121 119
No Yes Desulfosporosinus orientis DSM 765   152 150
No Yes Dehalobacter sp. DCA   85 84
No Yes Dehalobacter sp. CF   85 84
No Yes Syntrophobotulus glycolicus DSM 8271   81 80
No Yes Desulfitobacterium hafniense Y51   172 170
No Yes Desulfitobacterium dehalogenans ATCC 51507   118 116
No Yes Desulfotomaculum reducens MI-1   60 57
No Yes Desulfotomaculum acetoxidans DSM 771   74 72
No Yes Desulfotomaculum kuznetsovii DSM 6115   69 66
No Yes Desulfotomaculum carboxydivorans CO-1-SRB   58 55
No Yes Desulfotomaculum ruminis DSM 2154   104 101
No Yes Acetobacterium woodii DSM 1030   102 100
No Yes Eubacterium eligens ATCC 27750   59 58
No Yes Eubacterium limosum KIST612   117 111
No Yes Clostridium difficile 630   128 123
No Yes Clostridium sticklandii DSM 519   65 63
No Yes Filifactor alocis ATCC 35896   30 29
No Yes Clostridium saccharolyticum WM1   147 144
No Yes Clostridium phytofermentans ISDg   100 99
No Yes Clostridium lentocellum DSM 5427   90 89
No Yes [Ruminococcus] obeum   67 66
No Yes [Ruminococcus] torques   74 73
No Yes Eubacterium rectale M104/1   53 52
No Yes Eubacterium rectale ATCC 33656   66 65
No Yes Coprococcus sp. ART55/1   47 46
No Yes Roseburia hominis A2-183   73 72
No Yes Roseburia intestinalis   60 60
No Yes Butyrivibrio proteoclasticus B316   60 52
No Yes Butyrivibrio fibrisolvens   45 45
No Yes Syntrophothermus lipocalidus DSM 12680   38 35
No Yes Syntrophomonas wolfei subsp. wolfei str. Goettingen   42 39
No Yes Heliobacterium modesticaldum Ice1   51 48
No Yes Alkaliphilus oremlandii OhILAs   66 64
No Yes Alkaliphilus metalliredigens QYMF   100 96
No Yes Candidatus Arthromitus sp. SFB-mouse-Japan   24 22
No Yes Clostridium sp. BNL1100   75 73
No Yes Clostridium novyi NT   48 47
No Yes Clostridium ljungdahlii DSM 13528   152 148
No Yes Clostridium kluyveri DSM 555   105 104
No Yes Clostridium beijerinckii NCIMB 8052   181 180
No Yes Clostridium tetani E88   58 57
No Yes Clostridium perfringens ATCC 13124   75 72
No Yes Clostridium cellulovorans 743B   88 87
No Yes Clostridium botulinum A str. ATCC 3502   98 95
No Yes Clostridium acetobutylicum ATCC 824   112 110
No Yes Mahella australiensis 50-1 BON   57 56
No Yes Thermosediminibacter oceani DSM 16646   61 57
No Yes Caldicellulosiruptor obsidiansis OB47   47 46
No Yes Caldicellulosiruptor kronotskyensis 2002   47 46
No Yes Caldicellulosiruptor hydrothermalis 108   57 56
No Yes Caldicellulosiruptor owensensis OL   42 41
No Yes Caldicellulosiruptor lactoaceticus 6A   44 43
No Yes Caldicellulosiruptor kristjanssonii 177R1B   44 43
No Yes Caldicellulosiruptor saccharolyticus DSM 8903   60 59
No Yes Caldicellulosiruptor bescii DSM 6725   52 51
No Yes Thermoanaerobacterium xylanolyticum LX-11   51 49
No Yes Thermoanaerobacterium thermosaccharolyticum DSM 571   59 58
No Yes Thermodesulfobium narugense DSM 14796   24 23
No Yes Coprothermobacter proteolyticus DSM 5265   18 17
No Yes Tepidanaerobacter acetatoxydans Re1   64 63
No Yes Thermoanaerobacter tengcongensis MB4   55 52
No Yes Carboxydothermus hydrogenoformans Z-2901   57 54
No Yes Moorella thermoacetica ATCC 39073   69 65
No Yes Ammonifex degensii KC4   36 34
No Yes Thermoanaerobacter mathranii subsp. mathranii str. A3   53 51
No Yes Thermoanaerobacter pseudethanolicus ATCC 33223   55 52
No Yes Thermoanaerobacter sp. X514   63 60
No Yes Thermoanaerobacter italicus Ab9   57 54
No Yes Thermoanaerobacter wiegelii Rt8.B1   64 60
No Yes Thermoanaerobacter brockii subsp. finnii Ako-1   56 53
No Yes Acetohalobium arabaticum DSM 5501   49 46
No Yes Halothermothrix orenii H 168   49 48
No Yes Halanaerobium hydrogeniformans   52 50
No Yes Halanaerobium praevalens DSM 2228   47 45
No Yes Carnobacterium sp. 17-4   85 84
No Yes Carnobacterium sp. WN1359   73 69
No Yes Aerococcus urinae ACS-120-V-Col10a   32 31
No Yes Tetragenococcus halophilus NBRC 12172   69 68
No Yes Melissococcus plutonius DAT561   44 43
No Yes Enterococcus sp. 7L76   66 65
No Yes Enterococcus hirae ATCC 9790   66 64
No Yes Enterococcus faecium Aus0004   81 79
No Yes Enterococcus faecalis 62   88 85
No Yes Weissella koreensis KACC 15510   46 45
No Yes Oenococcus oeni PSU-1   42 41
No Yes Leuconostoc sp. C2   54 52
No Yes Leuconostoc kimchii IMSNU 11154   62 57
No Yes Leuconostoc citreum KM20   53 50
No Yes Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293   50 49
No Yes Leuconostoc gasicomitatum LMG 18811   56 55
No Yes Lactobacillus casei ATCC 334   74 72
No Yes Lactobacillus kefiranofaciens ZW3   43 41
No Yes Lactobacillus crispatus ST1   38 37
No Yes Lactobacillus rhamnosus Lc 705   84 81
No Yes Lactobacillus johnsonii FI9785   39 38
No Yes Lactobacillus sanfranciscensis TMW 1.1304   25 24
No Yes Lactobacillus salivarius CECT 5713   35 33
No Yes Lactobacillus ruminis ATCC 27782   46 45
No Yes Lactobacillus fermentum IFO 3956   46 45
No Yes Lactobacillus amylovorus GRL1118   42 41
No Yes Lactobacillus sakei subsp. sakei 23K   68 67
No Yes Lactobacillus reuteri DSM 20016   48 47
No Yes Lactobacillus gasseri ATCC 33323   42 41
No Yes Lactobacillus plantarum JDM1   119 118
No Yes Lactobacillus helveticus DPC 4571   30 29
No Yes Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365   37 36
No Yes Lactobacillus buchneri NRRL B-30929   56 55
No Yes Lactobacillus buchneri   55 54
No Yes Lactobacillus brevis ATCC 367   86 85
No Yes Lactobacillus acidophilus 30SC   41 40
No Yes Pediococcus claussenii ATCC BAA-344   58 55
No Yes Pediococcus pentosaceus ATCC 25745   61 60
No Yes Lactococcus garvieae ATCC 49156   43 42
No Yes Lactococcus lactis subsp. cremoris MG1363   58 57
No Yes Streptococcus sp. I-P16   37 36
No Yes Streptococcus sp. I-G2   35 34
No Yes Streptococcus intermedius JTH08   55 54
No Yes Streptococcus gallolyticus UCN34   68 67
No Yes Streptococcus pseudopneumoniae IS7493   42 40
No Yes Streptococcus pasteurianus ATCC 43144   62 61
No Yes Streptococcus equi subsp. equi 4047   49 46
No Yes Streptococcus dysgalactiae subsp. equisimilis GGS_124   48 47
No Yes Streptococcus infantarius subsp. infantarius CJ18   48 47
No Yes Streptococcus macedonicus ACA-DC 198   58 56
No Yes Streptococcus mitis B6   41 40
No Yes Streptococcus uberis 0140J   54 53
No Yes Streptococcus parauberis KCTC 11537   56 55
No Yes Streptococcus parasanguinis ATCC 15912   45 44
No Yes Streptococcus pyogenes str. Manfredo   48 47
No Yes Streptococcus pneumoniae P1031   39 38
No Yes Streptococcus agalactiae A909   46 45
No Yes Streptococcus mutans NN2025   56 55
No Yes Streptococcus thermophilus LMD-9   28 27
No Yes Streptococcus suis P1/7   53 52
No Yes Streptococcus sanguinis SK36   59 58
No Yes Streptococcus salivarius 57.I   40 39
No Yes Streptococcus oralis Uo5   41 40
No Yes Streptococcus gordonii str. Challis substr. CH1   51 50
No Yes Exiguobacterium sp. MH3   100 99
No Yes Exiguobacterium sp. AT1b   79 78
No Yes Exiguobacterium sibiricum 255-15   85 84
No Yes Kyrpidia tusciae DSM 2912   71 70
No Yes Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446   64 63
No Yes Brevibacillus brevis NBRC 100599   210 209
No Yes Paenibacillus sp. JDR-2   228 226
No Yes Paenibacillus terrae HPL-003   196 194
No Yes Paenibacillus mucilaginosus 3016   223 221
No Yes Paenibacillus polymyxa M1   184 182
No Yes Bacillus selenitireducens MLS10   77 75
No Yes Listeria welshimeri serovar 6b str. SLCC5334   103 101
No Yes Listeria innocua Clip11262   109 107
No Yes Listeria seeligeri serovar 1/2b str. SLCC3954   101 100
No Yes Listeria monocytogenes serotype 4b str. CLIP 80459   105 104
No Yes Listeria ivanovii subsp. ivanovii PAM 55   104 102
No Yes Solibacillus silvestris StLB046   96 95
No Yes Geobacillus thermoglucosidasius C56-YS93   88 86
No Yes Lysinibacillus sphaericus C3-41   135 133
No Yes Oceanobacillus iheyensis HTE831   84 82
No Yes Anoxybacillus flavithermus WK1   61 59
No Yes Geobacillus thermoleovorans CCB_US3_UF5   76 74
No Yes Geobacillus kaustophilus HTA426   78 75
No Yes Geobacillus sp. GHH01   80 78
No Yes Geobacillus sp. WCH70   60 58
No Yes Geobacillus thermodenitrificans NG80-2   78 77
No Yes Halobacillus halophilus DSM 2266   79 77
No Yes Bacillus sp. JS   127 125
No Yes Bacillus sp. 1NLA3E   108 105
No Yes Bacillus amyloliquefaciens FZB42   127 125
No Yes Bacillus atrophaeus 1942   129 127
No Yes Bacillus subtilis subsp. subtilis str. 168   138 136
No Yes Bacillus licheniformis DSM 13 = ATCC 14580   136 135
No Yes Bacillus halodurans C-125   114 113
No Yes Bacillus weihenstephanensis KBAB4   163 161
No Yes Bacillus thuringiensis str. Al Hakam   144 142
No Yes Bacillus cereus 03BB102   165 162
No Yes Bacillus anthracis str. A0248   153 152
No Yes Bacillus pseudofirmus OF4   89 84
No Yes Bacillus clausii KSM-K16   139 138
No Yes Bacillus cellulosilyticus DSM 2522   81 80
No Yes Bacillus pumilus SAFR-032   111 108
No Yes Bacillus megaterium DSM 319   167 165
No Yes Bacillus coagulans 2-6   61 60
No Yes Macrococcus caseolyticus JCSC5402   52 52
No Yes Staphylococcus pseudintermedius HKU10-03   63 63
No Yes Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305   88 86
No Yes Staphylococcus lugdunensis HKU09-01   74 71
No Yes Staphylococcus haemolyticus JCSC1435   69 66
No Yes Staphylococcus epidermidis RP62A   67 64
No Yes Staphylococcus carnosus subsp. carnosus TM300   76 75
No Yes Staphylococcus aureus subsp. aureus JH1   74 69
No Yes Staphylococcus aureus   43 39
No Yes Candidatus Cloacamonas acidaminovorans   12 12
No Yes Gemmatimonas aurantiaca T-27   59 58
No Yes Melioribacter roseus P3M   30 29
No Yes Ignavibacterium album JCM 16511   35 34
No Yes Pelodictyon phaeoclathratiforme BU-1   25 24
No Yes Chlorobium luteolum DSM 273   21 20
No Yes Chlorobium chlorochromatii CaD3   22 21
No Yes Chlorobium phaeobacteroides DSM 266   32 31
No Yes Chlorobium phaeovibrioides DSM 265   23 22
No Yes Chlorobium limicola DSM 245   29 28
No Yes Chlorobaculum parvum NCIB 8327   23 22
No Yes Chlorobium tepidum TLS   25 24
No Yes Chloroherpeton thalassium ATCC 35110   25 24
No Yes Prosthecochloris aestuarii DSM 271   31 30
No Yes Haliscomenobacter hydrossis DSM 1100   83 80
No Yes Saprospira grandis str. Lewin   33 31
No Yes Niastella koreensis GR20-10   103 102
No Yes Chitinophaga pinensis DSM 2588   145 144
No Yes Salinibacter ruber M8   32 30
No Yes Rhodothermus marinus DSM 4252   37 36
No Yes Flexibacter litoralis DSM 6794   32 31
No Yes Candidatus Amoebophilus asiaticus 5a2   8 8
No Yes Candidatus Cardinium hertigii   4 4
No Yes Belliella baltica DSM 15883   51 50
No Yes Cyclobacterium marinum DSM 745   60 59
No Yes Marivirga tractuosa DSM 4126   48 47
No Yes Fibrella aestuarina   72 71
No Yes Leadbetterella byssophila DSM 17132   49 48
No Yes Dyadobacter fermentans DSM 18053   95 95
No Yes Cytophaga hutchinsonii ATCC 33406   40 39
No Yes Spirosoma linguale DSM 74   117 110
No Yes Runella slithyformis DSM 19594   88 84
No Yes Parabacteroides distasonis ATCC 8503   30 30
No Yes Tannerella forsythia ATCC 43037   26 26
No Yes Paludibacter propionicigenes WB4   41 41
No Yes Odoribacter splanchnicus DSM 20712   32 32
No Yes Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2   17 12
No Yes Bacteroides sp. CF50   28 28
No Yes Prevotella melaninogenica ATCC 25845   24 24
No Yes Prevotella intermedia 17   21 21
No Yes Prevotella denticola F0289   24 24
No Yes Prevotella ruminicola 23   25 25
No Yes Porphyromonas asaccharolytica DSM 20707   14 14
No Yes Porphyromonas gingivalis ATCC 33277   20 20
No Yes Alistipes finegoldii DSM 17242   24 24
No Yes Bacteroides salanitronis DSM 18170   33 31
No Yes Bacteroides helcogenes P 36-108   34 34
No Yes Bacteroides vulgatus ATCC 8482   37 37
No Yes Bacteroides thetaiotaomicron VPI-5482   45 45
No Yes Bacteroides fragilis YCH46   38 38
No Yes Pedobacter saltans DSM 12145   52 50
No Yes Solitalea canadensis DSM 3403   72 70
No Yes Pedobacter heparinus DSM 2366   74 73
No Yes Sphingobacterium sp. 21   107 105
No Yes Fluviicola taffensis DSM 16823   48 48
No Yes Owenweeksia hongkongensis DSM 17368   36 36
No Yes Zunongwangia profunda SM-A87   58 58
No Yes Krokinobacter sp. 4H-3-7-5   31 31
No Yes Gramella forsetii KT0803   42 42
No Yes Lacinutrix sp. 5H-3-7-4   34 34
No Yes Maribacter sp. HTCC2170   40 40
No Yes Robiginitalea biformata HTCC2501   31 31
No Yes Croceibacter atlanticus HTCC2559   29 29
No Yes Aequorivita sublithincola DSM 14238   29 29
No Yes Zobellia galactanivorans   57 57
No Yes Muricauda ruestringensis DSM 13258   56 56
No Yes Cellulophaga algicola DSM 14237   52 52
No Yes Cellulophaga lytica DSM 7489   44 44
No Yes Flavobacteriaceae bacterium 3519-10   26 26
No Yes Polaribacter sp. MED152   26 26
No Yes Riemerella anatipestifer ATCC 11845 = DSM 15868   20 20
No Yes Ornithobacterium rhinotracheale DSM 15997   13 13
No Yes Capnocytophaga canimorsus Cc5   25 25
No Yes Capnocytophaga ochracea DSM 7271   17 17
No Yes Weeksella virosa DSM 16922   19 19
No Yes Flavobacterium indicum GPTSA100-9   22 22
No Yes Flavobacterium psychrophilum JIP02/86   20 20
No Yes Flavobacterium branchiophilum FL-15   25 24
No Yes Flavobacterium columnare ATCC 49512   31 31
No Yes Flavobacterium johnsoniae UW101   86 86
No Yes Blattabacterium sp. (Nauphoeta cinerea)   3 3
No Yes Blattabacterium sp. (Blattella germanica) str. Bge   2 2
No Yes Fibrobacter succinogenes subsp. succinogenes S85   32 30
No Yes Waddlia chondrophila WSU 86-1044   12 11
No Yes Candidatus Protochlamydia amoebophila UWE25   11 10
No Yes Parachlamydia acanthamoebae UV-7   13 12
No Yes Simkania negevensis Z   10 10
No Yes Chlamydophila pecorum E58   4 4
No Yes Chlamydia muridarum Nigg   3 3
No Yes Chlamydophila pneumoniae TW-183   4 4
No Yes Chlamydophila caviae GPIC   4 4
No Yes Chlamydophila felis Fe/C-56   4 4
No Yes Chlamydophila abortus S26/3   3 3
No Yes Chlamydia psittaci 01DC11   4 4
No Yes Chlamydia trachomatis B/Jali20/OT   3 3
No Yes Phycisphaera mikurensis NBRC 102666   31 30
No Yes Isosphaera pallida ATCC 43644   32 30
No Yes Planctomyces brasiliensis DSM 5305   48 44
No Yes Planctomyces limnophilus DSM 3776   47 43
No Yes Rhodopirellula baltica SH 1   51 48
No Yes Pirellula staleyi DSM 6068   57 54
No Yes Methylacidiphilum infernorum V4   15 15
No Yes Coraliomargarita akajimensis DSM 45221   36 35
No Yes Opitutus terrae PB90-1   53 52
No Yes Akkermansia muciniphila ATCC BAA-835   26 26
No Yes Fretibacterium fastidiosum   26 25
No Yes Thermovirga lienii DSM 17291   44 42
No Yes Aminobacterium colombiense DSM 12261   48 46
No Yes Thermanaerovibrio acidaminovorans DSM 6589   39 38
No Yes Anaerobaculum mobile DSM 13181   43 41
No Yes Turneriella parva DSM 21527   33 31
No Yes Leptospira borgpetersenii serovar Hardjo-bovis str. L550   26 25
No Yes Leptospira interrogans serovar Lai str. IPAV   26 25
No Yes Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'   40 39
No Yes Brachyspira murdochii DSM 12563   31 30
No Yes Brachyspira intermedia PWS/A   31 30
No Yes Brachyspira pilosicoli 95/1000   29 28
No Yes Brachyspira hyodysenteriae WA1   33 32
No Yes Borrelia garinii PBi   4 4
No Yes Borrelia bissettii DN127   4 4
No Yes Borrelia afzelii PKo   4 4
No Yes Borrelia burgdorferi B31   4 4
No Yes Borrelia recurrentis A1   5 5
No Yes Borrelia duttonii Ly   4 4
No Yes Borrelia crocidurae str. Achema   5 5
No Yes Borrelia turicatae 91E135   4 4
No Yes Borrelia hermsii DAH   4 4
No Yes Spirochaeta smaragdinae DSM 11293   131 130
No Yes Sphaerochaeta pleomorpha str. Grapes   93 92
No Yes Sphaerochaeta globus str. Buddy   83 82
No Yes Sphaerochaeta coccoides DSM 17374   45 44
No Yes Spirochaeta caldaria DSM 7334   51 50
No Yes Treponema azotonutricium ZAS-9   38 37
No Yes Treponema primitia ZAS-2   44 43
No Yes Treponema brennaborense DSM 12168   49 48
No Yes Treponema paraluiscuniculi Cuniculi A   5 5
No Yes Treponema succinifaciens DSM 2489   31 30
No Yes Treponema pallidum subsp. pallidum SS14   10 10
No Yes Treponema denticola ATCC 35405   35 34
No Yes Spirochaeta africana DSM 8902   38 37
No Yes Spirochaeta thermophila DSM 6192   37 35
No Yes Thermodesulfatator indicus DSM 15286   26 23
No Yes Thermodesulfobacterium sp. OPB45   18 16
No Yes Desulfurispirillum indicum S5   35 34
No Yes Calditerrivibrio nitroreducens DSM 19672   27 27
No Yes Denitrovibrio acetiphilus DSM 12809   59 59
No Yes Deferribacter desulfuricans SSM1   37 36
No Yes Flexistipes sinusarabici DSM 4947   38 37
No Yes Marinitoga piezophila KA3   31 30
No Yes Petrotoga mobilis SJ95   37 36
No Yes Mesotoga prima MesG1.Ag.4.2   53 52
No Yes Kosmotoga olearia TBF 19.5.1   43 42
No Yes Fervidobacterium pennivorans DSM 9078   30 29
No Yes Fervidobacterium nodosum Rt17-B1   28 27
No Yes Thermosipho melanesiensis BI429   31 30
No Yes Thermosipho africanus TCF52B   35 34
No Yes Thermotoga lettingae TMO   52 51
No Yes Thermotoga thermarum DSM 5069   38 37
No Yes Thermotoga sp. RQ2   37 36
No Yes Thermotoga naphthophila RKU-10   40 39
No Yes Thermotoga petrophila RKU-1   38 37
No Yes Thermotoga neapolitana DSM 4359   39 38
No Yes Thermotoga maritima MSB8   37 36
No Yes Thermovibrio ammonificans HB-1   22 20
No Yes Desulfurobacterium thermolithotrophum DSM 11699   21 19
No Yes Sulfurihydrogenibium sp. YO3AOP1   16 16
No Yes Sulfurihydrogenibium azorense Az-Fu1   16 16
No Yes Persephonella marina EX-H1   27 26
No Yes Hydrogenobaculum sp. SN   10 10
No Yes Hydrogenobaculum sp. HO   10 10
No Yes Hydrogenobaculum sp. Y04AAS1   10 10
No Yes Thermocrinis albus DSM 14484   9 9
No Yes Aquifex aeolicus VF5   14 14
No Yes Hydrogenobacter thermophilus TK-6   15 15
No Yes Elusimicrobium minutum Pei191   16 15
No Yes uncultured Termite group 1 bacterium phylotype Rs-D17   5 4
No Yes Dictyoglomus turgidum DSM 6724   34 33
No Yes Dictyoglomus thermophilum H-6-12   31 30
No Yes Caldisericum exile AZM16c01   27 26
No Yes Candidatus Chloracidobacterium thermophilum B   27 25
No Yes Candidatus Solibacter usitatus Ellin6076   148 144
No Yes Granulicella tundricola MP5ACTX9   66 64
No Yes Granulicella mallensis MP5ACTX8   109 107
No Yes Candidatus Koribacter versatilis Ellin345   83 79
No Yes Terriglobus saanensis SP1PR4   110 107
No Yes Terriglobus roseus DSM 18391   78 76
No Yes Acidobacterium capsulatum ATCC 51196   56 55
No Yes Thermodesulfovibrio yellowstonii DSM 11347   21 19
No Yes Candidatus Nitrospira defluvii   31 30
No Yes Leptospirillum ferrooxidans C2-3   29 29
No Yes Streptobacillus moniliformis DSM 12112   17 16
No Yes Sebaldella termitidis ATCC 33386   142 141
No Yes Leptotrichia buccalis C-1013-b   31 30
No Yes Ilyobacter polytropus DSM 2926   71 69
No Yes Fusobacterium nucleatum subsp. nucleatum ATCC 25586   43 42
No Yes Candidatus Methylomirabilis oxyfera   25 22
No Yes candidate division WWE3 bacterium RAAC2_WWE3_1   11 11
No Yes candidate division SR1 bacterium RAAC1_SR1_1   9 9
No Yes Candidatus Saccharibacteria bacterium RAAC3_TM7_1   16 16
No Yes Candidatus Saccharimonas aalborgensis   13 13
No Yes Acidithiobacillus ferrivorans SS3   53 52
No Yes Acidithiobacillus caldus SM-1   48 47
No Yes Acidithiobacillus ferrooxidans ATCC 53993   55 54
No Yes Bacteriovorax marinus SJ   42 40
No Yes Bdellovibrio bacteriovorus HD100   37 36
No Yes Nautilia profundicola AmH   16 16
No Yes Nitratifractor salsuginis DSM 16511   16 16
No Yes Sulfurospirillum deleyianum DSM 6946   29 29
No Yes Sulfurospirillum barnesii SES-3   30 30
No Yes Arcobacter sp. L   36 36
No Yes Arcobacter nitrofigilis DSM 7299   48 48
No Yes Arcobacter butzleri RM4018   32 31
No Yes Campylobacter hominis ATCC BAA-381   13 13
No Yes Campylobacter lari RM2100   15 15
No Yes Campylobacter curvus 525.92   23 23
No Yes Campylobacter concisus 13826   18 17
No Yes Campylobacter jejuni subsp. doylei 269.97   12 12
No Yes Campylobacter sp. 03-427   20 20
No Yes Campylobacter fetus subsp. fetus 82-40   19 19
No Yes uncultured Sulfuricurvum sp. RIFRC-1   23 23
No Yes Sulfuricurvum kujiense DSM 16994   31 30
No Yes Sulfurimonas autotrophica DSM 16294   20 20
No Yes Sulfurimonas denitrificans DSM 1251   19 19
No Yes Wolinella succinogenes DSM 1740   24 24
No Yes Helicobacter cetorum MIT 00-7128   11 9
No Yes Helicobacter bizzozeronii CIII-1   6 6
No Yes Helicobacter hepaticus ATCC 51449   16 16
No Yes Helicobacter mustelae 12198   7 7
No Yes Helicobacter felis ATCC 49179   10 10
No Yes Helicobacter cinaedi PAGU611   11 11
No Yes Helicobacter acinonychis str. Sheeba   7 7
No Yes Helicobacter pylori B38   5 5
No Yes Nitratiruptor sp. SB155-2   15 15
No Yes Sulfurovum sp. NBC37-1   18 18
No Yes Desulfarculus baarsii DSM 2075   53 50
No Yes Desulfobacca acetoxidans DSM 11109   35 33
No Yes Syntrophus aciditrophicus SB   34 32
No Yes Desulfomonile tiedjei DSM 6799   72 69
No Yes Syntrophobacter fumaroxidans MPOB   48 46
No Yes Desulfurivibrio alkaliphilus AHT2   29 27
No Yes Desulfotalea psychrophila LSv54   36 33
No Yes Desulfobulbus propionicus DSM 2032   37 34
No Yes Desulfatibacillum alkenivorans AK-01   74 71
No Yes Desulfobacterium autotrophicum HRM2   74 71
No Yes Desulfococcus oleovorans Hxd3   37 34
No Yes Desulfohalobium retbaense DSM 5692   39 37
No Yes Desulfomicrobium baculatum DSM 4028   52 50
No Yes Desulfovibrio piezophilus   64 62
No Yes Desulfovibrio aespoeensis Aspo-2   51 49
No Yes Lawsonia intracellularis PHE/MN1-00   11 9
No Yes Desulfovibrio magneticus RS-1   55 53
No Yes Desulfovibrio alaskensis G20   63 61
No Yes Desulfovibrio vulgaris subsp. vulgaris DP4   49 47
No Yes Desulfovibrio salexigens DSM 2638   68 66
No Yes Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774   31 29
No Yes Desulfovibrio africanus str. Walvis Bay   42 40
No Yes Hippea maritima DSM 10411   15 15
No Yes Geobacter daltonii FRC-32   54 50
No Yes Geobacter sp. M21   59 54
No Yes Geobacter uraniireducens Rf4   69 64
No Yes Geobacter lovleyi SZ   42 38
No Yes Geobacter bemidjiensis Bem   62 57
No Yes Geobacter sulfurreducens KN400   57 53
No Yes Geobacter metallireducens GS-15   51 47
No Yes Pelobacter propionicus DSM 2379   52 49
No Yes Pelobacter carbinolicus DSM 2380   53 50
No Yes Babela massiliensis   3 3
No Yes Haliangium ochraceum DSM 14365   74 71
No Yes Sorangium cellulosum 'So ce 56'   128 127
No Yes Anaeromyxobacter sp. Fw109-5   51 48
No Yes Anaeromyxobacter dehalogenans 2CP-1   65 62
No Yes Stigmatella aurantiaca DW4/3-1   149 146
No Yes Corallococcus coralloides DSM 2259   149 146
No Yes Myxococcus xanthus DK 1622   92 88
No Yes Myxococcus fulvus HW-1   92 87
No Yes Dechloromonas aromatica RCB   81 77
No Yes Thauera sp. MZ1T   87 85
No Yes Azoarcus sp. KH32C   130 128
No Yes Azoarcus sp. BH72   93 91
No Yes Aromatoleum aromaticum EbN1   69 67
No Yes Dechlorosoma suillum PS   73 72
No Yes Pseudogulbenkiania sp. NH8B   148 144
No Yes Laribacter hongkongensis HLHK9   58 55
No Yes Chromobacterium violaceum ATCC 12472   141 139
No Yes Neisseria meningitidis alpha14   28 27
No Yes Neisseria meningitidis FAM18   27 26
No Yes Neisseria lactamica 020-06   24 23
No Yes Neisseria gonorrhoeae NCCP11945   29 28
No Yes syncytium symbiont of Diaphorina citri   1 1
No Yes Candidatus Accumulibacter phosphatis clade IIA str. UW-1   67 66
No Yes beta proteobacterium CB   37 36
No Yes Methylibium petroleiphilum PM1   102 99
No Yes Thiomonas arsenitoxydans   69 68
No Yes Thiomonas intermedia K12   75 74
No Yes Rubrivivax gelatinosus IL144   122 118
No Yes Leptothrix cholodnii SP-6   110 108
No Yes Burkholderia rhizoxinica HKI 454   63 63
No Yes Burkholderia phytofirmans PsJN   379 375
No Yes Burkholderia phymatum STM815   346 341
No Yes Burkholderia xenovorans LB400   391 385
No Yes Ralstonia eutropha JMP134   351 349
No Yes Cupriavidus taiwanensis LMG 19424   277 275
No Yes Cupriavidus metallidurans CH34   279 276
No Yes Cupriavidus necator N-1   437 433
No Yes Ralstonia eutropha H16   370 365
No Yes Ralstonia pickettii 12D   198 196
No Yes Ralstonia solanacearum CFBP2957   161 160
No Yes Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1   34 33
No Yes Burkholderia sp. RPE64   327 322
No Yes Burkholderia sp. CCGE1002   302 297
No Yes Burkholderia thailandensis E264   214 210
No Yes Burkholderia pseudomallei 1106a   217 213
No Yes Burkholderia mallei SAVP1   166 163
No Yes Burkholderia ambifaria AMMD   358 353
No Yes Burkholderia cenocepacia HI2424   396 391
No Yes Burkholderia multivorans ATCC 17616   320 314
No Yes Burkholderia vietnamiensis G4   297 290
No Yes Burkholderia gladioli BSR3   418 412
No Yes Burkholderia glumae BGR1   209 205
No Yes Verminephrobacter eiseniae EF01-2   167 162
No Yes Alicycliphilus denitrificans K601   189 187
No Yes Ramlibacter tataouinensis TTB310   124 123
No Yes Delftia sp. Cs1-4   331 325
No Yes Delftia acidovorans SPH-1   327 321
No Yes Polaromonas sp. JS666   237 235
No Yes Polaromonas naphthalenivorans CJ2   134 132
No Yes Variovorax paradoxus S110   316 313
No Yes Rhodoferax ferrireducens T118   120 117
No Yes Acidovorax ebreus TPSY   110 108
No Yes Acidovorax sp. KKS102   190 187
No Yes Acidovorax sp. JS42   116 114
No Yes Acidovorax citrulli AAC00-1   149 147
No Yes Acidovorax avenae subsp. avenae ATCC 19860   190 187
No Yes Comamonas testosteroni CNB-2   225 221
No Yes Herminiimonas arsenicoxydans   74 72
No Yes Collimonas fungivorans Ter331   177 173
No Yes Janthinobacterium sp. Marseille   124 122
No Yes Herbaspirillum seropedicae SmR1   207 206
No Yes Pusillimonas sp. T7-7   149 146
No Yes Advenella kashmirensis WT001   194 193
No Yes Taylorella asinigenitalis MCE3   18 17
No Yes Taylorella equigenitalis MCE9   17 16
No Yes Bordetella petrii DSM 12804   261 260
No Yes Bordetella avium 197N   139 135
No Yes Bordetella pertussis Tohama I   176 175
No Yes Bordetella parapertussis 12822   253 252
No Yes Bordetella bronchiseptica RB50   306 305
No Yes Achromobacter xylosoxidans A8   467 462
No Yes Achromobacter xylosoxidans   368 364
No Yes Thiobacillus denitrificans ATCC 25259   35 34
No Yes Nitrosospira multiformis ATCC 25196   31 30
No Yes Nitrosomonas sp. Is79A3   33 32
No Yes Nitrosomonas eutropha C91   26 25
No Yes Nitrosomonas europaea ATCC 19718   24 23
No Yes Sideroxydans lithotrophicus ES-1   37 36
No Yes Gallionella capsiferriformans ES-2   38 36
No Yes Methylotenera versatilis 301   50 48
No Yes Methylotenera mobilis JLW8   41 40
No Yes Methylovorus sp. MP688   47 46
No Yes Methylovorus glucosetrophus SIP3-4   47 46
No Yes Methylobacillus flagellatus KT   39 38
No Yes Magnetococcus marinus MC-1   38 36
No Yes Parvularcula bermudensis HTCC2503   42 41
No Yes Asticcacaulis excentricus CB 48   90 87
No Yes Brevundimonas subvibrioides ATCC 15264   60 58
No Yes Caulobacter sp. K31   153 151
No Yes Caulobacter crescentus NA1000   89 87
No Yes Caulobacter segnis ATCC 21756   139 134
No Yes Phenylobacterium zucineum HLK1   89 88
No Yes Erythrobacter litoralis HTCC2594   36 35
No Yes Sphingopyxis alaskensis RB2256   75 72
No Yes Novosphingobium sp. PP1Y   114 112
No Yes Novosphingobium aromaticivorans DSM 12444   92 90
No Yes Sphingobium sp. SYK-6   116 110
No Yes Sphingobium japonicum UT26S   101 99
No Yes Sphingobium chlorophenolicum L-1   105 103
No Yes Sphingomonas sp. MM-1   97 96
No Yes Sphingomonas wittichii RW1   171 170
No Yes Zymomonas mobilis subsp. mobilis NCIMB 11163   38 38
No Yes Maricaulis maris MCS10   64 63
No Yes Hirschia baltica ATCC 49814   77 74
No Yes Hyphomonas neptunium ATCC 15444   72 71
No Yes Dinoroseobacter shibae DFL 12   114 111
No Yes Phaeobacter gallaeciensis 2.10   147 146
No Yes Pseudovibrio sp. FO-BEG1   203 201
No Yes Jannaschia sp. CCS1   142 141
No Yes Ruegeria sp. TM1040   146 144
No Yes Ruegeria pomeroyi DSS-3   191 189
No Yes Ketogulonicigenium vulgare Y25   98 97
No Yes Ketogulonigenium vulgarum WSH-001   102 101
No Yes Roseobacter litoralis Och 149   127 126
No Yes Roseobacter denitrificans OCh 114   106 104
No Yes Rhodobacter sphaeroides ATCC 17029   112 110
No Yes Rhodobacter capsulatus SB 1003   87 86
No Yes Paracoccus denitrificans PD1222   198 192
No Yes Rhodospirillum photometricum DSM 122   56 55
No Yes Tistrella mobilis KA081020-065   262 259
No Yes Magnetospirillum magneticum AMB-1   78 77
No Yes Rhodospirillum centenum SW   67 65
No Yes Rhodospirillum rubrum F11   100 99
No Yes Azospirillum lipoferum 4B   169 168
No Yes Azospirillum sp. B510   207 206
No Yes Azospirillum brasilense Sp245   206 204
No Yes Gluconacetobacter xylinus NBRC 3288   81 80
No Yes Granulibacter bethesdensis CGDNIH1   47 46
No Yes Gluconacetobacter diazotrophicus PAl 5   94 93
No Yes Acidiphilium multivorum AIU301   104 102
No Yes Acidiphilium cryptum JF-5   98 95
No Yes Gluconobacter oxydans 621H   54 54
No Yes Acetobacter pasteurianus IFO 3283-01   62 61
No Yes Polymorphum gilvum SL003B-26A1   134 130
No Yes Micavibrio aeruginosavorus ARL-13   24 23
No Yes Candidatus Puniceispirillum marinum IMCC1322   45 44
No Yes alpha proteobacterium HIMB5   14 13
No Yes alpha proteobacterium HIMB59   20 19
No Yes Candidatus Pelagibacter sp. IMCC9063   14 13
No Yes Candidatus Midichloria mitochondrii IricVA   5 5
No Yes Neorickettsia sennetsu str. Miyayama   3 3
No Yes Neorickettsia risticii str. Illinois   3 3
No Yes Wolbachia endosymbiont of Culex quinquefasciatus Pel   2 2
No Yes Wolbachia sp. wRi   6 6
No Yes Ehrlichia chaffeensis str. Arkansas   3 3
No Yes Ehrlichia canis str. Jake   3 3
No Yes Ehrlichia ruminantium str. Gardel   4 4
No Yes Anaplasma phagocytophilum HZ   3 3
No Yes Anaplasma marginale str. Florida   3 3
No Yes Anaplasma centrale str. Israel   3 3
No Yes Orientia tsutsugamushi str. Boryong   3 3
No Yes Rickettsia bellii OSU 85-389   5 5
No Yes Rickettsia canadensis str. McKiel   2 2
No Yes Rickettsia typhi str. Wilmington   2 2
No Yes Rickettsia prowazekii str. BuV67-CWPP   2 2
No Yes Rickettsia philipii str. 364D   4 4
No Yes Rickettsia heilongjiangensis 054   4 4
No Yes Rickettsia peacockii str. Rustic   3 3
No Yes Rickettsia felis URRWXCal2   5 5
No Yes Rickettsia slovaca 13-B   4 4
No Yes Rickettsia parkeri str. Portsmouth   4 4
No Yes Rickettsia massiliae MTU5   4 4
No Yes Rickettsia japonica YH   4 4
No Yes Rickettsia africae ESF-5   4 4
No Yes Rickettsia rhipicephali str. 3-7-female6-CWPP   5 5
No Yes Rickettsia montanensis str. OSU 85-930   4 4
No Yes Candidatus Rickettsia amblyommii str. GAT-30V   5 5
No Yes Rickettsia australis str. Cutlack   3 3
No Yes Rickettsia akari str. Hartford   3 3
No Yes Rickettsia rickettsii str. 'Sheila Smith'   4 4
No Yes Rickettsia conorii str. Malish 7   4 4
No Yes Starkeya novella DSM 506   170 166
No Yes Xanthobacter autotrophicus Py2   156 151
No Yes Azorhizobium caulinodans ORS 571   192 188
No Yes Methylobacterium chloromethanicum CM4   106 106
No Yes Methylobacterium extorquens AM1   116 113
No Yes Methylobacterium sp. 4-46   176 174
No Yes Methylobacterium populi BJ001   110 110
No Yes Methylobacterium nodulans ORS 2060   228 227
No Yes Methylobacterium radiotolerans JCM 2831   164 163
No Yes Parvibaculum lavamentivorans DS-1   80 79
No Yes Ochrobactrum anthropi ATCC 49188   199 195
No Yes Brucella microti CCM 4915   105 104
No Yes Brucella pinnipedialis B2/94   102 101
No Yes Brucella canis ATCC 23365   100 99
No Yes Brucella suis ATCC 23445   99 98
No Yes Brucella melitensis ATCC 23457   103 102
No Yes Brucella ovis ATCC 25840   91 90
No Yes Brucella abortus S19   103 102
No Yes Sinorhizobium fredii NGR234   234 230
No Yes Sinorhizobium medicae WSM419   253 250
No Yes Sinorhizobium meliloti AK83   261 256
No Yes Genome sequence of Rhizobium sp. strain IRBG74   213 211
No Yes Rhizobium etli CIAT 652   239 236
No Yes Rhizobium leguminosarum bv. viciae 3841   336 327
No Yes Agrobacterium tumefaciens str. C58   232 231
No Yes Agrobacterium radiobacter K84   342 334
No Yes Agrobacterium sp. H13-3   230 228
No Yes Agrobacterium vitis S4   203 198
No Yes Candidatus Liberibacter asiaticus str. psy62   6 6
No Yes Mesorhizobium sp. BNC1   179 171
No Yes Mesorhizobium opportunistum WSM2075   249 246
No Yes Mesorhizobium ciceri biovar biserrulae WSM1271   247 243
No Yes Mesorhizobium loti MAFF303099   288 282
No Yes Methylocella silvestris BL2   81 78
No Yes Beijerinckia indica subsp. indica ATCC 9039   106 103
No Yes Pelagibacterium halotolerans B2   150 146
No Yes Rhodomicrobium vannielii ATCC 17100   63 62
No Yes Hyphomicrobium sp. MC1   103 98
No Yes Hyphomicrobium denitrificans ATCC 51888   62 61
No Yes Oligotropha carboxidovorans OM4   89 85
No Yes Rhodopseudomonas palustris BisA53   81 80
No Yes Nitrobacter winogradskyi Nb-255   43 42
No Yes Nitrobacter hamburgensis X14   62 59
No Yes Bradyrhizobium japonicum USDA 110   244 243
No Yes Bradyrhizobium sp. ORS 278   181 180
No Yes Methylocystis sp. SC2   51 50
No Yes Bartonella tribocorum CIP 105476   14 14
No Yes Bartonella clarridgeiae 73   10 10
No Yes Bartonella henselae str. Houston-1   12 12
No Yes Bartonella grahamii as4aup   13 13
No Yes Bartonella quintana str. Toulouse   10 10
No Yes Bartonella bacilliformis KC583   9 9
No Yes Saccharophagus degradans 2-40   59 57
No Yes Teredinibacter turnerae T7901   65 63
No Yes Cellvibrio japonicus Ueda107   57 55
No Yes Aggregatibacter aphrophilus NJ8700   32 30
No Yes Aggregatibacter actinomycetemcomitans D7S-1   38 36
No Yes Haemophilus somnus 129PT   37 35
No Yes Gallibacterium anatis UMN179   54 52
No Yes Pasteurella multocida subsp. multocida str. 3480   35 33
No Yes Haemophilus parasuis SH0165   38 37
No Yes Haemophilus ducreyi 35000HP   25 24
No Yes Haemophilus parainfluenzae T3T1   32 31
No Yes Haemophilus influenzae PittEE   29 28
No Yes Actinobacillus succinogenes 130Z   57 55
No Yes Actinobacillus pleuropneumoniae serovar 5b str. L20   36 35
No Yes Oceanimonas sp. GK1   91 90
No Yes Tolumonas auensis DSM 9187   103 103
No Yes Aeromonas veronii B565   112 110
No Yes Aeromonas salmonicida subsp. salmonicida A449   112 109
No Yes Aeromonas hydrophila subsp. hydrophila ATCC 7966   124 121
No Yes Aliivibrio salmonicida LFI1238   76 74
No Yes Vibrio fischeri MJ11   108 107
No Yes Vibrio sp. Ex25   133 132
No Yes Vibrio harveyi ATCC BAA-1116   131 129
No Yes Vibrio parahaemolyticus RIMD 2210633   138 137
No Yes Vibrio splendidus LGP32   142 141
No Yes Vibrio anguillarum 775   87 86
No Yes Vibrio furnissii NCTC 11218   149 148
No Yes Vibrio vulnificus MO6-24/O   125 124
No Yes Vibrio cholerae O395   83 82
No Yes Photobacterium profundum SS9   156 154
No Yes Psychromonas ingrahamii 37   65 64
No Yes Psychromonas sp. CNPT3   53 53
No Yes Idiomarina loihiensis L2TR   49 48
No Yes Ferrimonas balearica DSM 9799   85 83
No Yes Shewanella piezotolerans WP3   111 109
No Yes Shewanella loihica PV-4   102 100
No Yes Shewanella halifaxensis HAW-EB4   108 105
No Yes Shewanella sediminis HAW-EB3   134 132
No Yes Shewanella denitrificans OS217   66 64
No Yes Shewanella pealeana ATCC 700345   112 109
No Yes Shewanella oneidensis MR-1   98 95
No Yes Shewanella baltica OS185   108 105
No Yes Shewanella woodyi ATCC 51908   116 114
No Yes Shewanella sp. MR-4   89 86
No Yes Shewanella amazonensis SB2B   84 82
No Yes Shewanella violacea DSS12   92 90
No Yes Shewanella frigidimarina NCIMB 400   100 98
No Yes Shewanella putrefaciens CN-32   98 96
No Yes Colwellia psychrerythraea 34H   118 117
No Yes Pseudoalteromonas sp. SM9913   65 63
No Yes Pseudoalteromonas atlantica T6c   106 102
No Yes Pseudoalteromonas haloplanktis TAC125   80 77
No Yes Glaciecola sp. 4H-3-7+YE-5   107 105
No Yes Glaciecola nitratireducens FR1064   49 48
No Yes Marinobacter adhaerens HP15   80 78
No Yes Marinobacter sp. BSs20148   88 87
No Yes Marinobacter hydrocarbonoclasticus ATCC 49840   75 74
No Yes Marinobacter aquaeolei VT8   73 70
No Yes Alteromonas sp. SN2   80 78
No Yes Alteromonas macleodii str. 'Deep ecotype'   67 66
No Yes Kangiella koreensis DSM 16069   37 36
No Yes Hahella chejuensis KCTC 2396   140 138
No Yes Alcanivorax borkumensis SK2   43 42
No Yes Marinomonas posidonica IVIA-Po-181   131 130
No Yes Marinomonas sp. MWYL1   189 186
No Yes Marinomonas mediterranea MMB-1   149 147
No Yes Chromohalobacter salexigens DSM 3043   117 114
No Yes Halomonas elongata DSM 2581   121 119
No Yes Methylomicrobium alcaliphilum   40 39
No Yes Methylomonas methanica MC09   57 56
No Yes Methylococcus capsulatus str. Bath   29 28
No Yes Dichelobacter nodosus VCS1703A   11 10
No Yes Rhodanobacter denitrificans   72 71
No Yes Frateuria aurantia DSM 6220   87 85
No Yes Pseudoxanthomonas spadix BD-a59   47 45
No Yes Pseudoxanthomonas suwonensis 11-1   46 45
No Yes Stenotrophomonas maltophilia K279a   116 112
No Yes Xylella fastidiosa M23   20 19
No Yes Xanthomonas axonopodis pv. citri str. 306   85 82
No Yes Xanthomonas albilineans GPE PC73   45 43
No Yes Xanthomonas oryzae pv. oryzae PXO99A   62 59
No Yes Xanthomonas campestris pv. campestris str. B100   87 84
No Yes Halothiobacillus neapolitanus c2   35 34
No Yes Spiribacter sp. UAH-SP71   39 38
No Yes Alkalilimnicola ehrlichii MLHE-1   41 40
No Yes Thioalkalivibrio sulfidophilus HL-EbGr7   46 45
No Yes Thioalkalivibrio sp. K90mix   36 35
No Yes Halorhodospira halophila SL1   33 32
No Yes Allochromatium vinosum DSM 180   48 42
No Yes Thiocystis violascens DSM 198   46 44
No Yes Nitrosococcus watsonii C-113   24 23
No Yes Nitrosococcus halophilus Nc4   34 33
No Yes Nitrosococcus oceani ATCC 19707   28 26
No Yes Coxiella burnetii Dugway 5J108-111   22 20
No Yes Legionella longbeachae NSW150   43 42
No Yes Legionella pneumophila str. Corby   35 34
No Yes Baumannia cicadellinicola str. Hc (Homalodisca coagulata)   7 7
No Yes gamma proteobacterium HdN1   41 40
No Yes Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)   5 5
No Yes Candidatus Vesicomyosocius okutanii HA   5 5
No Yes Photorhabdus asymbiotica   72 70
No Yes Photorhabdus luminescens subsp. laumondii TTO1   86 84
No Yes Xenorhabdus bovienii SS-2004   72 71
No Yes Xenorhabdus nematophila ATCC 19061   76 75
No Yes Providencia stuartii MRSN 2154   104 102
No Yes Proteus mirabilis HI4320   81 79
No Yes Edwardsiella ictaluri 93-146   77 74
No Yes Edwardsiella tarda EIB202   85 82
No Yes Rahnella sp. Y9602   205 200
No Yes Rahnella aquatilis CIP 78.65 = ATCC 33071   187 185
No Yes Yersinia pseudotuberculosis IP 31758   95 91
No Yes Yersinia pestis Pestoides F   91 88
No Yes Yersinia enterocolitica subsp. enterocolitica 8081   115 112
No Yes Serratia sp. AS12   225 222
No Yes Serratia symbiotica str. 'Cinara cedri'   3 3
No Yes Serratia sp. ATCC 39006   170 166
No Yes Serratia plymuthica AS9   225 222
No Yes Serratia proteamaculans 568   215 211
No Yes Dickeya dadantii Ech703   137 136
No Yes Dickeya zeae Ech1591   137 135
No Yes Pectobacterium wasabiae WPP163   124 123
No Yes Pectobacterium sp. SCC3193   127 126
No Yes Pectobacterium atrosepticum SCRI1043   141 139
No Yes Pectobacterium carotovorum subsp. carotovorum PC1   136 134
No Yes Sodalis glossinidius str. 'morsitans'   56 56
No Yes Halyomorpha halys symbiont   8 8
No Yes Pantoea sp. At-9b   255 248
No Yes Pantoea vagans C9-1   155 153
No Yes Pantoea ananatis LMG 20103   144 141
No Yes Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis   2 2
No Yes Erwinia tasmaniensis Et1/99   97 92
No Yes Erwinia sp. Ejp617   77 75
No Yes Erwinia billingiae Eb661   196 190
No Yes Erwinia pyrifoliae Ep1/96   79 77
No Yes Erwinia amylovora ATCC 49946   76 74
No Yes Escherichia blattae DSM 4481   124 120
No Yes Candidatus Moranella endobia PCIT   1 1
No Yes Cronobacter turicensis z3032   127 124
No Yes Cronobacter sakazakii ES15   120 117
No Yes secondary endosymbiont of Ctenarytaina eucalypti   6 6
No Yes Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)   12 11
No Yes Candidatus Blochmannia floridanus   4 4
No Yes Enterobacteriaceae bacterium strain FGI 57   148 145
No Yes Shigella sonnei Ss046   95 92
No Yes Shigella flexneri 5 str. 8401   101 98
No Yes Shigella dysenteriae Sd197   91 87
No Yes Shigella boydii CDC 3083-94   98 94
No Yes Salmonella bongori NCTC 12419   123 120
No Yes Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594   124 121
No Yes Klebsiella oxytoca E718   221 215
No Yes Klebsiella variicola At-22   223 217
No Yes Klebsiella pneumoniae NTUH-K2044   207 203
No Yes Enterobacter aerogenes KCTC 2190   189 186
No Yes Escherichia fergusonii ATCC 35469   123 119
No Yes Escherichia coli 'BL21-Gold(DE3)pLysS AG'   110 107
No Yes Enterobacter sp. R4-368   156 152
No Yes Enterobacter sp. 638   138 135
No Yes Enterobacter asburiae LF7a   162 158
No Yes Enterobacter cloacae subsp. dissolvens SDM   167 164
No Yes Citrobacter rodentium ICC168   139 133
No Yes Citrobacter koseri ATCC BAA-895   124 121
No Yes Azotobacter vinelandii DJ   139 136
No Yes Pseudomonas sp. TKP   246 243
No Yes Pseudomonas sp. UW4   208 204
No Yes Pseudomonas brassicacearum subsp. brassicacearum NFM421   252 248
No Yes Pseudomonas entomophila L48   184 180
No Yes Pseudomonas syringae pv. tomato str. DC3000   156 153
No Yes Pseudomonas stutzeri A1501   79 76
No Yes Pseudomonas fulva 12-X   151 149
No Yes Pseudomonas putida F1   216 211
No Yes Pseudomonas protegens Pf-5   249 246
No Yes Pseudomonas fluorescens SBW25   240 236
No Yes Pseudomonas mendocina ymp   131 129
No Yes Pseudomonas aeruginosa UCBPP-PA14   221 217
No Yes Pseudomonas sp. VLB120   199 195
No Yes Psychrobacter sp. G   53 49
No Yes Psychrobacter sp. PRwf-1   37 36
No Yes Psychrobacter arcticus 273-4   31 30
No Yes Psychrobacter cryohalolentis K5   48 46
No Yes Moraxella catarrhalis RH4   21 20
No Yes Acinetobacter oleivorans DR1   150 149
No Yes Acinetobacter calcoaceticus PHEA-2   142 141
No Yes Acinetobacter baumannii ATCC 17978   82 79
No Yes Acinetobacter sp. ADP1   102 100
No Yes Methylophaga sp. JAM1   37 37
No Yes Cycloclasticus sp. P1   27 26
No Yes Thiomicrospira crunogena XCL-2   26 26
No Yes Thioalkalimicrobium cyclicum ALM1   16 16
No Yes Francisella noatunensis subsp. orientalis str. Toba 04   23 23
No Yes Francisella sp. TX077308   30 30
No Yes Francisella philomiragia subsp. philomiragia ATCC 25017   26 26
No Yes Francisella tularensis subsp. tularensis WY96-3418   24 24
No Yes Francisella cf. novicida 3523   21 21
No Yes Francisella novicida U112   24 24
No Yes Nanoarchaeum equitans Kin4-M   12 12
No Yes Candidatus Caldiarchaeum subterraneum   52 50
No Yes Cenarchaeum symbiosum A   39 35
No Yes Candidatus Nitrosopumilus sp. AR2   67 65
No Yes Nitrosopumilus maritimus SCM1   71 63
No Yes Candidatus Korarchaeum cryptofilum OPF8   51 49
No Yes Acidilobus saccharovorans 345-15   36 36
No Yes Fervidicoccus fontis Kam940   36 36
No Yes Pyrolobus fumarii 1A   42 42
No Yes Hyperthermus butylicus DSM 5456   35 35
No Yes Thermogladius cellulolyticus 1633   28 28
No Yes Ignisphaera aggregans DSM 17230   44 44
No Yes Aeropyrum pernix K1   43 43
No Yes Ignicoccus hospitalis KIN4/I   27 27
No Yes Thermosphaera aggregans DSM 11486   31 31
No Yes Staphylothermus hellenicus DSM 12710   36 36
No Yes Staphylothermus marinus F1   38 38
No Yes Desulfurococcus fermentans DSM 16532   32 32
No Yes Desulfurococcus kamchatkensis 1221n   30 30
No Yes Desulfurococcus mucosus DSM 2162   28 28
No Yes Metallosphaera cuprina Ar-4   56 53
No Yes Metallosphaera sedula DSM 5348   73 71
No Yes Acidianus hospitalis W1   74 71
No Yes Sulfolobus tokodaii str. 7   94 90
No Yes Sulfolobus islandicus Y.N.15.51   91 87
No Yes Sulfolobus solfataricus P2   79 75
No Yes Sulfolobus acidocaldarius DSM 639   84 80
No Yes Thermofilum sp. 1910b   53 53
No Yes Thermofilum pendens Hrk 5   54 54
No Yes Vulcanisaeta moutnovskia 768-28   51 51
No Yes Vulcanisaeta distributa DSM 14429   66 66
No Yes Caldivirga maquilingensis IC-167   56 56
No Yes Pyrobaculum sp. 1860   66 66
No Yes Pyrobaculum calidifontis JCM 11548   47 47
No Yes Pyrobaculum arsenaticum DSM 13514   61 61
No Yes Pyrobaculum oguniense TE7   66 66
No Yes Thermoproteus neutrophilus V24Sta   57 57
No Yes Pyrobaculum aerophilum str. IM2   61 61
No Yes Pyrobaculum islandicum DSM 4184   51 51
No Yes Thermoproteus uzoniensis 768-20   59 59
No Yes Thermoproteus tenax Kra 1   52 52
No Yes halophilic archaeon DL31   115 112
No Yes Methanocella arvoryzae MRE50   120 103
No Yes Methanocella conradii HZ254   83 75
No Yes Methanocella paludicola SANAE   95 86
No Yes Methanosaeta harundinacea 6Ac   49 47
No Yes Methanosaeta thermophila PT   46 44
No Yes Methanosaeta concilii GP6   66 65
No Yes Methanosalsum zhilinae DSM 4017   59 57
No Yes Methanohalobium evestigatum Z-7303   71 66
No Yes Methanococcoides burtonii DSM 6242   78 73
No Yes Methanosarcina acetivorans C2A   146 138
No Yes Methanosarcina mazei Go1   117 114
No Yes Methanosarcina barkeri str. Fusaro   119 111
No Yes Methanohalophilus mahii DSM 5219   63 61
No Yes Methanosphaerula palustris E1-9c   83 80
No Yes Methanoregula boonei 6A8   64 62
No Yes Methanospirillum hungatei JF-1   69 67
No Yes Methanocorpusculum labreanum Z   44 43
No Yes Methanoplanus petrolearius DSM 11571   85 75
No Yes Methanoculleus bourgensis MS2   72 68
No Yes Methanoculleus marisnigri JR1   67 61
No Yes Methanopyrus kandleri AV19   27 26
No Yes Ferroglobus placidus DSM 10642   93 89
No Yes Archaeoglobus profundus DSM 5631   72 70
No Yes Archaeoglobus veneficus SNP6   71 68
No Yes Archaeoglobus fulgidus DSM 4304   83 80
No Yes Thermococcus sp. 4557   78 75
No Yes Thermococcus onnurineus NA1   63 59
No Yes Thermococcus kodakarensis KOD1   70 68
No Yes Thermococcus gammatolerans EJ3   73 69
No Yes Thermococcus sibiricus MM 739   63 60
No Yes Thermococcus barophilus MP   82 78
No Yes Pyrococcus sp. ST04   58 56
No Yes Pyrococcus yayanosii CH1   61 59
No Yes Pyrococcus horikoshii OT3   70 67
No Yes Pyrococcus abyssi GE5   72 70
No Yes Pyrococcus furiosus COM1   68 66
No Yes Thermoplasmatales archaeon BRNA1   31 29
No Yes Thermoplasma volcanium GSS1   44 44
No Yes Thermoplasma acidophilum DSM 1728   48 48
No Yes Picrophilus torridus DSM 9790   53 50
No Yes Salinarchaeum sp. Harcht-Bsk1   100 97
No Yes Halopiger xanaduensis SH-6   147 142
No Yes Haloterrigena turkmenica DSM 5511   211 206
No Yes Natrinema sp. J7-2   144 139
No Yes Natrialba magadii ATCC 43099   139 136
No Yes Halorubrum lacusprofundi ATCC 49239   137 133
No Yes Haloquadratum walsbyi DSM 16790   83 81
No Yes Halogeometricum borinquense DSM 11551   151 147
No Yes Haloferax mediterranei ATCC 33500   152 149
No Yes Haloferax volcanii DS2   168 163
No Yes Halomicrobium mukohataei DSM 12286   109 108
No Yes Halorhabdus utahensis DSM 12940   105 102
No Yes Natronomonas pharaonis DSM 2160   88 85
No Yes Haloarcula hispanica ATCC 33960   128 125
No Yes Haloarcula marismortui ATCC 43049   157 152
No Yes Halalkalicoccus jeotgali B3   157 154
No Yes Halobacterium salinarum R1   120 116
No Yes Halobacterium sp. NRC-1   105 103
No Yes Methanotorris igneus Kol 5   39 38
No Yes Methanocaldococcus sp. FS406-22   47 45
No Yes Methanocaldococcus fervens AG86   36 36
No Yes Methanocaldococcus vulcanius M7   42 41
No Yes methanocaldococcus infernus ME   28 28
No Yes Methanocaldococcus jannaschii DSM 2661   41 40
No Yes Methanothermococcus okinawensis IH1   40 39
No Yes Methanococcus aeolicus Nankai-3   32 31
No Yes Methanococcus maripaludis C5   55 55
No Yes Methanococcus voltae A3   40 40
No Yes Methanococcus vannielii SB   40 40
No Yes Methanothermus fervidus DSM 2088   17 17
No Yes Methanothermobacter marburgensis str. Marburg   35 35
No Yes Methanothermobacter thermautotrophicus str. Delta H   36 36
No Yes Methanosphaera stadtmanae DSM 3091   23 23
No Yes Methanobrevibacter sp. AbM4   33 33
No Yes Methanobrevibacter ruminantium M1   45 45
No Yes Methanobrevibacter smithii ATCC 35061   37 37
No Yes Complete genome sequence of Methanobacterium sp. Mb1   45 45
No Yes Aciduliprofundum sp. MAR08-339   55 51
No Yes Aciduliprofundum boonei T469   55 51
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 499 480
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 176 170
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 109 103
No Yes Ascaris suum Victoria/Ghent Pig roundworm 109 99
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 142 135
No Yes Cryptococcus neoformans var. grubii H99   53 49
No Yes Cryptococcus neoformans B-3501A   56 51
No Yes Cryptococcus neoformans JEC21   48 44
No Yes Paracoccidioides brasiliensis Pb01   48 44
No Yes Paracoccidioides brasiliensis Pb03   43 42
No Yes Coccidioides posadasii str. Silveira   59 56
No Yes Coccidioides immitis RMSCC 3703   48 45
No Yes Coccidioides immitis RMSCC 2394   60 57
No Yes Coccidioides immitis H538.4   47 45
No Yes Ajellomyces dermatitidis ER-3   51 49
No Yes Histoplasma capsulatum H143   49 46
No Yes Histoplasma capsulatum H88   54 50
No Yes Histoplasma capsulatum G186AR   54 50
No Yes Aspergillus fumigatus A1163   66 64
No Yes Candida albicans WO-1   43 40
No Yes Saccharomyces cerevisiae UC5   39 35
No Yes Saccharomyces cerevisiae PW5   46 41
No Yes Saccharomyces cerevisiae FL100   29 27
No Yes Saccharomyces cerevisiae CLIB382   3 2
No Yes Saccharomyces cerevisiae CLIB324   22 19
No Yes Saccharomyces cerevisiae CBS7960   39 35
No Yes Saccharomyces cerevisiae YJM269   41 37
No Yes Saccharomyces cerevisiae T7   50 45
No Yes Saccharomyces cerevisiae FostersB   41 37
No Yes Saccharomyces cerevisiae FostersO   42 40
No Yes Saccharomyces cerevisiae VL3   37 35
No Yes Saccharomyces cerevisiae Vin13   38 36
No Yes Saccharomyces cerevisiae LalvinQA23   40 37
No Yes Saccharomyces cerevisiae AWRI796   33 30
No Yes Saccharomyces cerevisiae Sigma1278b   50 45
No Yes Saccharomyces cerevisiae W303   50 45
No Yes Saccharomyces cerevisiae JAY291   49 44
No Yes Saccharomyces cerevisiae AWRI1631   34 33
No Yes Saccharomyces cerevisiae YPS163   19 17
No Yes Saccharomyces cerevisiae M22   14 12
No Yes Saccharomyces cerevisiae T73   15 12
No Yes Saccharomyces cerevisiae CLIB215   34 32
No Yes Saccharomyces cerevisiae Y10   23 20
No Yes Saccharomyces cerevisiae YJM789   50 45
No Yes Saccharomyces cerevisiae YJM789   50 45
No Yes Saccharomyces cerevisiae RM11-1a   50 45
No Yes Saccharomyces cerevisiae RM11-1a   48 43
No Yes Saccharomyces cerevisiae SGD (SGD) Baker's yeast 50 45
No Yes Schizosaccharomyces pombe 972h-   53 49
No Yes Batrachochytrium dendrobatidis JEL423   45 41
No Yes Batrachochytrium dendrobatidis JAM81   58 53
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 133 128
No Yes Hordeum vulgare 22 Domesticated barley 216 211
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 259 250
No Yes Trypanosoma brucei Lister 427 v4.1   32 31
No Yes Neospora caninum Nc-Liverpool 6.2   24 23
No Yes Plasmodium falciparum HB3   20 19
No Yes Plasmodium falciparum Dd2   15 14
No Yes Chroococcidiopsis thermalis PCC 7203   67 66
No Yes Chamaesiphon minutus PCC 6605   70 69
No Yes Synechocystis sp. PCC 6803 substr. PCC-P   28 27
No Yes Synechocystis sp. PCC 6803 substr. PCC-N   28 27
No Yes Synechocystis sp. PCC 6803 substr. GT-I   28 27
No Yes Synechocystis sp. PCC 6803   36 35
No Yes Cyanobium gracile PCC 6307   31 30
No Yes Dactylococcopsis salina PCC 8305   31 30
No Yes Synechococcus sp. JA-2-3B'a(2-13)   26 25
No Yes Synechococcus sp. JA-3-3Ab   25 24
No Yes Synechococcus sp. CC9902   15 14
No Yes Synechococcus sp. RCC307   16 15
No Yes Synechococcus sp. CC9605   18 17
No Yes Synechococcus sp. WH 8102   16 15
No Yes Synechococcus sp. WH 7803   15 14
No Yes Synechococcus sp. PCC 7002   30 29
No Yes Synechococcus elongatus PCC 6301   30 29
No Yes Prochlorococcus marinus str. NATL1A   12 11
No Yes Prochlorococcus marinus str. MIT 9301   10 10
No Yes Prochlorococcus marinus str. AS9601   9 9
No Yes Prochlorococcus marinus subsp. marinus str. CCMP1375   12 11
No Yes Prochlorococcus marinus subsp. pastoris str. CCMP1986   14 13
No Yes Prochlorococcus marinus str. MIT 9215   9 9
No Yes Prochlorococcus marinus str. MIT 9211   10 9
No Yes Prochlorococcus marinus str. MIT 9313   17 16
No Yes Prochlorococcus marinus str. MIT 9312   11 10
No Yes Prochlorococcus marinus str. MIT 9303   18 17
No Yes Prochlorococcus marinus str. NATL2A   12 11
No Yes Crinalium epipsammum PCC 9333   32 31
No Yes Oscillatoria nigro-viridis PCC 7112   42 41
No Yes Oscillatoria acuminata PCC 6304   38 37
No Yes Arthrospira platensis NIES-39   37 36
No Yes Cyanothece sp. PCC 7822   51 47
No Yes Cyanothece sp. PCC 7425   53 52
No Yes Cyanothece sp. PCC 7424   38 37
No Yes Cyanothece sp. ATCC 51142   40 39
No Yes Cyanothece sp. PCC 8801   34 33
No Yes Cyanobacterium aponinum PCC 10605   30 29
No Yes Cyanobacterium stanieri PCC 7202   27 26
No Yes Gloeobacter kilaueensis Gloeobacter sp. JS   59 56
No Yes Pleurocapsa minor Pleurocapsa sp. PCC 7327   43 42
No Yes Stanieria cyanosphaera PCC 7437   44 43
No Yes Calothrix parietina Calothrix sp. PCC 6303   39 38
No Yes Cylindrospermum stagnale PCC 7417   45 44
No Yes Anabaena cylindrica PCC 7122   43 42
No Yes Candidatus Phytoplasma solani tobfin_28409   2 2
No Yes Candidatus Phytoplasma australiense Strawberry lethal yellows phytoplasma (CPA) str. NZSb11   2 2
No Yes Candidatus Phytoplasma australiense   2 2
No Yes Mesoplasma florum W37   9 8
No Yes Spiroplasma syrphidicola EA-1   8 7
No Yes Spiroplasma diminutum CUAS-1   10 9
No Yes Spiroplasma chrysopicola DF-1   9 8
No Yes Spiroplasma taiwanense CT-1   10 9
No Yes Spiroplasma apis B31   10 9