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Hemerythrin-like superfamily domain assignments
in
Vibrio vulnificus YJ016

Assignment details

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Vibrio vulnificus YJ016 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|37680156|ref|NP_934765.1|   1.44e-27   1-131   Hemerythrin-like  

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Select to display   Genome       Domains   Proteins
No Yes ALL   32988 32988
No Yes Helobdella robusta   18 18
No Yes Nematostella vectensis 1.0 Starlet sea anemone 2 2
No Yes Aspergillus carbonarius ITEM 5010   1 1
No Yes Vitis vinifera Wine grape 1 1
No Yes Ostreococcus sp. RCC809   1 1
No Yes Micromonas sp. RCC299   1 1
No Yes Micromonas pusilla CCMP1545 v3.0   1 1
No Yes Bigelowiella natans CCMP2755 22   1 1
No Yes Fragilariopsis cylindrus   2 2
No Yes Symbiodinium minutum clade B1 v1.2   2 2
No Yes Naegleria gruberi   9 9
No Yes Emiliania huxleyi CCMP1516   2 2
No Yes Thermosynechococcus sp. NK55   2 2
No Yes Thermosynechococcus elongatus BP-1   2 2
No Yes Microcoleus sp. PCC 7113   2 1
No Yes Geitlerinema sp. PCC 7407   1 1
No Yes Halothece sp. PCC 7418   3 3
No Yes Rubrobacter xylanophilus DSM 9941   1 1
No Yes Anaerolinea thermophila UNI-1   1 1
No Yes Deinococcus proteolyticus MRP   1 1
No Yes Meiothermus silvanus DSM 9946   1 1
No Yes Meiothermus ruber DSM 1279   1 1
No Yes Selenomonas sputigena ATCC 35185   2 1
No Yes Natranaerobius thermophilus JW/NM-WN-LF   1 1
No Yes Symbiobacterium thermophilum IAM 14863   1 1
No Yes Clostridium clariflavum DSM 19732   2 2
No Yes Clostridium cellulolyticum H10   2 2
No Yes Clostridium thermocellum ATCC 27405   2 2
No Yes Ethanoligenens harbinense YUAN-3   1 1
No Yes Ruminococcus sp.   1 1
No Yes Oscillibacter valericigenes Sjm18-20   2 2
No Yes butyrate-producing bacterium SS3/4   1 1
No Yes butyrate-producing bacterium SM4/1   1 1
No Yes Thermincola potens JR   2 2
No Yes Desulfosporosinus acidiphilus SJ4   1 1
No Yes Desulfosporosinus orientis DSM 765   1 1
No Yes Syntrophobotulus glycolicus DSM 8271   1 1
No Yes Desulfitobacterium hafniense Y51   2 2
No Yes Desulfitobacterium dehalogenans ATCC 51507   2 2
No Yes Desulfotomaculum carboxydivorans CO-1-SRB   1 1
No Yes Acetobacterium woodii DSM 1030   3 3
No Yes Eubacterium eligens ATCC 27750   3 2
No Yes Clostridium sticklandii DSM 519   3 3
No Yes Clostridium saccharolyticum WM1   4 4
No Yes Clostridium phytofermentans ISDg   2 2
No Yes Clostridium lentocellum DSM 5427   3 3
No Yes [Ruminococcus] obeum   1 1
No Yes Eubacterium rectale M104/1   3 3
No Yes Eubacterium rectale ATCC 33656   3 3
No Yes Roseburia hominis A2-183   3 2
No Yes Roseburia intestinalis   2 1
No Yes Syntrophothermus lipocalidus DSM 12680   1 1
No Yes Syntrophomonas wolfei subsp. wolfei str. Goettingen   1 1
No Yes Heliobacterium modesticaldum Ice1   1 1
No Yes Alkaliphilus oremlandii OhILAs   3 3
No Yes Alkaliphilus metalliredigens QYMF   1 1
No Yes Clostridium sp. BNL1100   2 2
No Yes Clostridium ljungdahlii DSM 13528   2 2
No Yes Clostridium kluyveri DSM 555   1 1
No Yes Clostridium beijerinckii NCIMB 8052   8 8
No Yes Clostridium tetani E88   1 1
No Yes Clostridium cellulovorans 743B   2 2
No Yes Clostridium botulinum A str. ATCC 3502   1 1
No Yes Clostridium acetobutylicum ATCC 824   1 1
No Yes Mahella australiensis 50-1 BON   1 1
No Yes Thermosediminibacter oceani DSM 16646   1 1
No Yes Caldicellulosiruptor obsidiansis OB47   1 1
No Yes Caldicellulosiruptor kronotskyensis 2002   1 1
No Yes Caldicellulosiruptor hydrothermalis 108   1 1
No Yes Caldicellulosiruptor owensensis OL   1 1
No Yes Caldicellulosiruptor lactoaceticus 6A   1 1
No Yes Caldicellulosiruptor kristjanssonii 177R1B   1 1
No Yes Caldicellulosiruptor saccharolyticus DSM 8903   2 2
No Yes Caldicellulosiruptor bescii DSM 6725   3 3
No Yes Thermoanaerobacterium xylanolyticum LX-11   2 2
No Yes Thermoanaerobacterium thermosaccharolyticum DSM 571   2 2
No Yes Thermodesulfobium narugense DSM 14796   2 2
No Yes Coprothermobacter proteolyticus DSM 5265   2 2
No Yes Tepidanaerobacter acetatoxydans Re1   1 1
No Yes Thermoanaerobacter tengcongensis MB4   1 1
No Yes Thermoanaerobacter mathranii subsp. mathranii str. A3   2 2
No Yes Thermoanaerobacter italicus Ab9   2 2
No Yes Acetohalobium arabaticum DSM 5501   1 1
No Yes Halothermothrix orenii H 168   1 1
No Yes Halanaerobium praevalens DSM 2228   1 1
No Yes Melioribacter roseus P3M   2 2
No Yes Chloroherpeton thalassium ATCC 35110   3 3
No Yes Bacteroides sp. CF50   1 1
No Yes Opitutus terrae PB90-1   1 1
No Yes Turneriella parva DSM 21527   7 5
No Yes Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'   3 2
No Yes Brachyspira murdochii DSM 12563   6 6
No Yes Brachyspira intermedia PWS/A   5 5
No Yes Brachyspira pilosicoli 95/1000   4 4
No Yes Brachyspira hyodysenteriae WA1   5 5
No Yes Spirochaeta smaragdinae DSM 11293   3 3
No Yes Spirochaeta caldaria DSM 7334   1 1
No Yes Treponema azotonutricium ZAS-9   3 3
No Yes Treponema primitia ZAS-2   4 4
No Yes Treponema brennaborense DSM 12168   3 3
No Yes Treponema succinifaciens DSM 2489   1 1
No Yes Treponema denticola ATCC 35405   2 2
No Yes Spirochaeta africana DSM 8902   1 1
No Yes Spirochaeta thermophila DSM 6192   1 1
No Yes Thermodesulfatator indicus DSM 15286   3 3
No Yes Thermodesulfobacterium sp. OPB45   2 2
No Yes Desulfurispirillum indicum S5   5 5
No Yes Calditerrivibrio nitroreducens DSM 19672   2 2
No Yes Denitrovibrio acetiphilus DSM 12809   4 4
No Yes Deferribacter desulfuricans SSM1   3 3
No Yes Flexistipes sinusarabici DSM 4947   1 1
No Yes Thermovibrio ammonificans HB-1   1 1
No Yes Sulfurihydrogenibium sp. YO3AOP1   1 1
No Yes Sulfurihydrogenibium azorense Az-Fu1   2 2
No Yes Persephonella marina EX-H1   2 2
No Yes Hydrogenobaculum sp. SN   1 1
No Yes Hydrogenobaculum sp. HO   1 1
No Yes Hydrogenobaculum sp. Y04AAS1   1 1
No Yes Aquifex aeolicus VF5   1 1
No Yes Hydrogenobacter thermophilus TK-6   2 2
No Yes Elusimicrobium minutum Pei191   1 1
No Yes Candidatus Solibacter usitatus Ellin6076   3 3
No Yes Candidatus Koribacter versatilis Ellin345   5 5
No Yes Bdellovibrio bacteriovorus HD100   1 1
No Yes Nautilia profundicola AmH   1 1
No Yes Sulfurospirillum deleyianum DSM 6946   1 1
No Yes Sulfurospirillum barnesii SES-3   1 1
No Yes Arcobacter sp. L   3 2
No Yes Arcobacter nitrofigilis DSM 7299   1 1
No Yes Arcobacter butzleri RM4018   1 1
No Yes Campylobacter lari RM2100   2 2
No Yes Campylobacter sp. 03-427   2 2
No Yes Campylobacter fetus subsp. fetus 82-40   2 2
No Yes Sulfuricurvum kujiense DSM 16994   1 1
No Yes Sulfurimonas autotrophica DSM 16294   1 1
No Yes Sulfurimonas denitrificans DSM 1251   1 1
No Yes Wolinella succinogenes DSM 1740   2 2
No Yes Helicobacter hepaticus ATCC 51449   2 2
No Yes Helicobacter cinaedi PAGU611   2 2
No Yes Nitratiruptor sp. SB155-2   1 1
No Yes Sulfurovum sp. NBC37-1   1 1
No Yes Desulfomonile tiedjei DSM 6799   2 2
No Yes Desulfurivibrio alkaliphilus AHT2   2 2
No Yes Desulfotalea psychrophila LSv54   3 3
No Yes Desulfobulbus propionicus DSM 2032   5 5
No Yes Desulfatibacillum alkenivorans AK-01   2 2
No Yes Desulfobacterium autotrophicum HRM2   2 2
No Yes Desulfomicrobium baculatum DSM 4028   1 1
No Yes Desulfovibrio piezophilus   7 6
No Yes Desulfovibrio aespoeensis Aspo-2   7 7
No Yes Desulfovibrio magneticus RS-1   12 12
No Yes Desulfovibrio alaskensis G20   3 3
No Yes Desulfovibrio vulgaris subsp. vulgaris DP4   4 4
No Yes Desulfovibrio salexigens DSM 2638   9 9
No Yes Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774   2 2
No Yes Desulfovibrio africanus str. Walvis Bay   2 2
No Yes Geobacter daltonii FRC-32   2 2
No Yes Geobacter sp. M21   11 11
No Yes Geobacter uraniireducens Rf4   2 2
No Yes Geobacter lovleyi SZ   7 7
No Yes Geobacter bemidjiensis Bem   9 9
No Yes Geobacter sulfurreducens KN400   5 5
No Yes Geobacter metallireducens GS-15   2 2
No Yes Pelobacter propionicus DSM 2379   3 3
No Yes Pelobacter carbinolicus DSM 2380   1 1
No Yes Anaeromyxobacter sp. Fw109-5   8 8
No Yes Anaeromyxobacter dehalogenans 2CP-1   7 7
No Yes Dechloromonas aromatica RCB   14 14
No Yes Thauera sp. MZ1T   8 8
No Yes Azoarcus sp. KH32C   6 6
No Yes Azoarcus sp. BH72   5 5
No Yes Dechlorosoma suillum PS   6 6
No Yes Candidatus Accumulibacter phosphatis clade IIA str. UW-1   9 9
No Yes Rubrivivax gelatinosus IL144   2 2
No Yes Leptothrix cholodnii SP-6   1 1
No Yes Burkholderia phymatum STM815   1 1
No Yes Burkholderia xenovorans LB400   3 3
No Yes Ralstonia eutropha JMP134   1 1
No Yes Cupriavidus taiwanensis LMG 19424   1 1
No Yes Cupriavidus metallidurans CH34   1 1
No Yes Cupriavidus necator N-1   3 3
No Yes Ralstonia eutropha H16   1 1
No Yes Ralstonia pickettii 12D   3 3
No Yes Ralstonia solanacearum CFBP2957   1 1
No Yes Burkholderia sp. CCGE1002   2 2
No Yes Burkholderia thailandensis E264   1 1
No Yes Burkholderia pseudomallei 1106a   1 1
No Yes Burkholderia mallei SAVP1   1 1
No Yes Burkholderia multivorans ATCC 17616   1 1
No Yes Burkholderia vietnamiensis G4   1 1
No Yes Verminephrobacter eiseniae EF01-2   1 1
No Yes Alicycliphilus denitrificans K601   1 1
No Yes Delftia sp. Cs1-4   3 3
No Yes Delftia acidovorans SPH-1   2 2
No Yes Polaromonas naphthalenivorans CJ2   3 3
No Yes Rhodoferax ferrireducens T118   3 3
No Yes Acidovorax ebreus TPSY   2 2
No Yes Acidovorax sp. KKS102   1 1
No Yes Acidovorax sp. JS42   2 2
No Yes Acidovorax citrulli AAC00-1   1 1
No Yes Acidovorax avenae subsp. avenae ATCC 19860   1 1
No Yes Comamonas testosteroni CNB-2   4 4
No Yes Herminiimonas arsenicoxydans   1 1
No Yes Herbaspirillum seropedicae SmR1   2 2
No Yes Bordetella avium 197N   1 1
No Yes Nitrosomonas sp. Is79A3   1 1
No Yes Sideroxydans lithotrophicus ES-1   14 14
No Yes Gallionella capsiferriformans ES-2   5 5
No Yes Methylotenera versatilis 301   1 1
No Yes Magnetococcus marinus MC-1   15 15
No Yes Rhodospirillum photometricum DSM 122   5 5
No Yes Magnetospirillum magneticum AMB-1   38 38
No Yes Rhodospirillum rubrum F11   7 6
No Yes Azospirillum lipoferum 4B   6 6
No Yes Azospirillum sp. B510   6 6
No Yes Azospirillum brasilense Sp245   15 14
No Yes Mesorhizobium sp. BNC1   1 1
No Yes Rhodopseudomonas palustris BisA53   1 1
No Yes Teredinibacter turnerae T7901   5 5
No Yes Tolumonas auensis DSM 9187   2 2
No Yes Aeromonas veronii B565   1 1
No Yes Aeromonas salmonicida subsp. salmonicida A449   1 1
No Yes Aeromonas hydrophila subsp. hydrophila ATCC 7966   2 2
No Yes Vibrio parahaemolyticus RIMD 2210633   1 1
No Yes Vibrio furnissii NCTC 11218   1 1
No Yes Vibrio vulnificus MO6-24/O   1 1
No Yes Vibrio cholerae O395   1 1
No Yes Idiomarina loihiensis L2TR   1 1
No Yes Shewanella loihica PV-4   1 1
No Yes Shewanella sediminis HAW-EB3   1 1
No Yes Shewanella oneidensis MR-1   1 1
No Yes Shewanella baltica OS185   1 1
No Yes Shewanella sp. MR-4   1 1
No Yes Shewanella amazonensis SB2B   1 1
No Yes Shewanella putrefaciens CN-32   1 1
No Yes Colwellia psychrerythraea 34H   8 8
No Yes Marinobacter hydrocarbonoclasticus ATCC 49840   1 1
No Yes Marinobacter aquaeolei VT8   1 1
No Yes Alteromonas sp. SN2   1 1
No Yes Alcanivorax borkumensis SK2   1 1
No Yes Methylomicrobium alcaliphilum   2 2
No Yes Methylomonas methanica MC09   6 6
No Yes Methylococcus capsulatus str. Bath   1 1
No Yes Pseudoxanthomonas spadix BD-a59   1 1
No Yes Pseudoxanthomonas suwonensis 11-1   1 1
No Yes Stenotrophomonas maltophilia K279a   1 1
No Yes Xanthomonas axonopodis pv. citri str. 306   1 1
No Yes Xanthomonas campestris pv. campestris str. B100   1 1
No Yes Alkalilimnicola ehrlichii MLHE-1   1 1
No Yes Thioalkalivibrio sulfidophilus HL-EbGr7   1 1
No Yes Allochromatium vinosum DSM 180   2 2
No Yes Thiocystis violascens DSM 198   2 2
No Yes gamma proteobacterium HdN1   2 2
No Yes Serratia sp. ATCC 39006   1 1
No Yes Dickeya dadantii Ech703   1 1
No Yes Azotobacter vinelandii DJ   1 1
No Yes Pseudomonas aeruginosa UCBPP-PA14   1 1
No Yes Acinetobacter oleivorans DR1   1 1
No Yes Acinetobacter calcoaceticus PHEA-2   1 1
No Yes Acinetobacter baumannii ATCC 17978   1 1
No Yes Methylophaga sp. JAM1   1 1
No Yes Cycloclasticus sp. P1   1 1
No Yes Pyrolobus fumarii 1A   1 1
No Yes Thermogladius cellulolyticus 1633   1 1
No Yes Thermosphaera aggregans DSM 11486   2 2
No Yes Staphylothermus hellenicus DSM 12710   1 1
No Yes Desulfurococcus fermentans DSM 16532   1 1
No Yes Desulfurococcus mucosus DSM 2162   1 1
No Yes Methanosphaerula palustris E1-9c   1 1
No Yes Methanoregula boonei 6A8   1 1
No Yes Methanospirillum hungatei JF-1   2 2
No Yes Methanoplanus petrolearius DSM 11571   1 1
No Yes Halomicrobium mukohataei DSM 12286   1 1
No Yes Haloarcula hispanica ATCC 33960   1 1
No Yes Haloarcula marismortui ATCC 43049   1 1
No Yes Methanotorris igneus Kol 5   1 1
No Yes Methanocaldococcus sp. FS406-22   1 1
No Yes Methanocaldococcus fervens AG86   1 1
No Yes Methanocaldococcus vulcanius M7   1 1
No Yes methanocaldococcus infernus ME   1 1
No Yes Methanocaldococcus jannaschii DSM 2661   1 1
No Yes Methanothermococcus okinawensis IH1   1 1
No Yes Dactylococcopsis salina PCC 8305   1 1
No Yes Oscillatoria nigro-viridis PCC 7112   1 1
No Yes Arthrospira platensis NIES-39   1 1
No Yes Cyanothece sp. PCC 7425   3 3
No Yes Cyanobacterium aponinum PCC 10605   1 1
No Yes Clostridium thermocellum DSM 1313   2 2
No Yes [Clostridium] stercorarium Clostridiu subsp. stercorarium DSM 8532   2 2
No Yes Clostridium acidurici 9a   2 2
No Yes Desulfosporosinus meridiei DSM 13257   1 1
No Yes Desulfitobacterium dichloroeliminans LMG P-21439   1 1
No Yes Desulfitobacterium hafniense DCB-2   2 2
No Yes Clostridium saccharolyticum Clostridium cf. saccharolyticum K10   1 1
No Yes Roseburia intestinalis XB6B4   2 1
No Yes Clostridium saccharobutylicum DSM 13864   3 3
No Yes Clostridium autoethanogenum DSM 10061   2 2
No Yes Clostridium saccharoperbutylacetonicum N1-4(HMT)   10 10
No Yes Clostridium kluyveri NBRC 12016   1 1
No Yes Clostridium tetani genome 12124569   1 1
No Yes Clostridium pasteurianum BC1   1 1
No Yes Clostridium botulinum H04402 065   1 1
No Yes Clostridium botulinum F str. 230613   1 1
No Yes Clostridium botulinum F str. Langeland   1 1
No Yes Clostridium botulinum E3 str. Alaska E43   2 2
No Yes Clostridium botulinum B1 str. Okra   1 1
No Yes Clostridium botulinum Ba4 str. 657   1 1
No Yes Clostridium botulinum A2 str. Kyoto   1 1
No Yes Clostridium botulinum A3 str. Loch Maree   2 2
No Yes Clostridium botulinum A str. Hall   1 1
No Yes Clostridium botulinum A str. ATCC 19397   1 1
No Yes Clostridium acetobutylicum DSM 1731   1 1
No Yes Clostridium acetobutylicum EA 2018   1 1
No Yes Thermoanaerobacterium saccharolyticum JW/SL-YS485   2 2
No Yes Thermoanaerobacterium thermosaccharolyticum M0795   2 2
No Yes Halobacteroides halobius DSM 5150   2 2
No Yes Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'   3 2
No Yes Brachyspira pilosicoli WesB   4 4
No Yes Brachyspira pilosicoli B2904   4 4
No Yes Brachyspira pilosicoli P43/6/78   3 3
No Yes Treponema pedis str. T A4   2 2
No Yes Hydrogenobacter thermophilus TK-6   2 2
No Yes Arcobacter butzleri 7h1h   1 1
No Yes Arcobacter butzleri ED-1   1 1
No Yes Campylobacter jejuni Waterborne C.jejuni Outbreak   7 7
No Yes Campylobacter jejuni RM1221   2 2
No Yes Campylobacter jejuni subsp. jejuni 00-2544   4 4
No Yes Campylobacter jejuni subsp. jejuni 00-2538   4 4
No Yes Campylobacter jejuni subsp. jejuni 00-2426   4 4
No Yes Campylobacter jejuni subsp. jejuni 00-2425   4 4
No Yes Campylobacter jejuni subsp. jejuni PT14   4 4
No Yes Campylobacter jejuni subsp. jejuni ICDCCJ07001   6 6
No Yes Campylobacter jejuni subsp. jejuni S3   3 3
No Yes Campylobacter jejuni subsp. jejuni M1   6 6
No Yes Campylobacter jejuni subsp. jejuni IA3902   4 4
No Yes Campylobacter jejuni subsp. jejuni 81116   7 7
No Yes Campylobacter jejuni subsp. jejuni 81-176   4 4
No Yes Campylobacter jejuni subsp. jejuni NCTC 11168-BN148   3 3
No Yes Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819   3 3
No Yes Campylobacter coli 76339   5 5
No Yes Campylobacter coli 15-537360   4 4
No Yes Campylobacter coli CVM N29710   6 6
No Yes Desulfocapsa sulfexigens DSM 10523   4 4
No Yes Desulfobacula toluolica Tol2   3 3
No Yes Desulfovibrio hydrothermalis AM13 = DSM 14728   8 8
No Yes Desulfovibrio vulgaris RCH1   4 4
No Yes Desulfovibrio vulgaris str. 'Miyazaki F'   3 3
No Yes Desulfovibrio vulgaris str. Hildenborough   4 4
No Yes Desulfovibrio gigas DSM 1382 = ATCC 19364   3 3
No Yes Desulfovibrio desulfuricans ND132   3 3
No Yes Geobacter sp. M18   9 9
No Yes Geobacter sulfurreducens PCA   5 5
No Yes Anaeromyxobacter sp. K   7 7
No Yes Anaeromyxobacter dehalogenans 2CP-C   9 9
No Yes Ralstonia pickettii 12J   1 1
No Yes Ralstonia solanacearum FQY_4   1 1
No Yes Ralstonia solanacearum Po82   1 1
No Yes Ralstonia solanacearum PSI07   1 1
No Yes Ralstonia solanacearum CMR15   1 1
No Yes Ralstonia solanacearum GMI1000   1 1
No Yes Burkholderia sp. YI23   1 1
No Yes Burkholderia thailandensis MSMB121   1 1
No Yes Burkholderia pseudomallei MSHR305   1 1
No Yes Burkholderia pseudomallei NCTC 13179   1 1
No Yes Burkholderia pseudomallei BPC006   1 1
No Yes Burkholderia pseudomallei 1026b   1 1
No Yes Burkholderia pseudomallei MSHR346   1 1
No Yes Burkholderia pseudomallei 668   1 1
No Yes Burkholderia pseudomallei 1710b   1 1
No Yes Burkholderia pseudomallei K96243   1 1
No Yes Burkholderia mallei NCTC 10229   1 1
No Yes Burkholderia mallei NCTC 10247   1 1
No Yes Burkholderia mallei ATCC 23344   1 1
No Yes Burkholderia multivorans ATCC 17616   1 1
No Yes Candidatus Symbiobacter mobilis Comamonadaceae bacterium CR   2 2
No Yes Alicycliphilus denitrificans BC   1 1
No Yes Variovorax paradoxus B4   1 1
No Yes Sulfuricella denitrificans skB26   2 2
No Yes Magnetospirillum gryphiswaldense MSR-1 v2   30 30
No Yes Rhodospirillum rubrum ATCC 11170   7 6
No Yes Rhodopseudomonas palustris DX-1   2 2
No Yes Rhodopseudomonas palustris TIE-1   1 1
No Yes Rhodopseudomonas palustris BisB18   1 1
No Yes Rhodopseudomonas palustris CGA009   1 1
No Yes Aeromonas hydrophila ML09-119   1 1
No Yes Vibrio parahaemolyticus BB22OP   1 1
No Yes Vibrio vulnificus CMCP6   1 1
No Yes Vibrio vulnificus YJ016   1 1
No Yes Vibrio cholerae LMA3984-4   1 1
No Yes Vibrio cholerae M66-2   1 1
No Yes Vibrio cholerae O395   1 1
No Yes Vibrio cholerae IEC224   1 1
No Yes Vibrio cholerae O1 str. 2010EL-1786   1 1
No Yes Vibrio cholerae MJ-1236   1 1
No Yes Vibrio cholerae O1 biovar El Tor str. N16961   1 1
No Yes Idiomarina loihiensis GSL 199   1 1
No Yes Shewanella sp. W3-18-1   1 1
No Yes Shewanella sp. ANA-3   1 1
No Yes Shewanella baltica BA175   1 1
No Yes Shewanella baltica OS678   1 1
No Yes Shewanella baltica OS117   1 1
No Yes Shewanella baltica OS223   1 1
No Yes Shewanella baltica OS195   1 1
No Yes Shewanella baltica OS155   1 1
No Yes Shewanella sp. MR-7   1 1
No Yes Shewanella putrefaciens 200   1 1
No Yes Thalassolituus oleivorans MIL-1   1 1
No Yes Stenotrophomonas maltophilia D457   1 1
No Yes Stenotrophomonas maltophilia JV3   1 1
No Yes Stenotrophomonas maltophilia R551-3   1 1
No Yes Xanthomonas citri subsp. citri Aw12879   1 1
No Yes Xanthomonas campestris pv. vesicatoria str. 85-10   1 1
No Yes Xanthomonas axonopodis pv. citrumelo F1   1 1
No Yes Xanthomonas axonopodis Xac29-1   1 1
No Yes Xanthomonas campestris pv. raphani 756C   2 2
No Yes Xanthomonas campestris pv. campestris str. 8004   1 1
No Yes Xanthomonas campestris pv. campestris str. ATCC 33913   1 1
No Yes Thioalkalivibrio nitratireducens DSM 14787   2 2
No Yes Thioflavicoccus mobilis 8321   3 3
No Yes Dickeya dadantii Ech586   2 2
No Yes Azotobacter vinelandii CA6   1 1
No Yes Azotobacter vinelandii CA   1 1
No Yes Pseudomonas denitrificans ATCC 13867   1 1
No Yes Pseudomonas resinovorans NBRC 106553   1 1
No Yes Pseudomonas mendocina NK-01   1 1
No Yes Pseudomonas aeruginosa SCV20265   1 1
No Yes Pseudomonas aeruginosa MTB-1   1 1
No Yes Pseudomonas aeruginosa LES431   1 1
No Yes Pseudomonas aeruginosa RP73   1 1
No Yes Pseudomonas aeruginosa B136-33   1 1
No Yes Pseudomonas aeruginosa PA1R   1 1
No Yes Pseudomonas aeruginosa PA1   1 1
No Yes Pseudomonas aeruginosa DK2   1 1
No Yes Pseudomonas aeruginosa NCGM2.S1   1 1
No Yes Pseudomonas aeruginosa M18   1 1
No Yes Pseudomonas aeruginosa LESB58   1 1
No Yes Pseudomonas aeruginosa PA7   1 1
No Yes Pseudomonas aeruginosa PAO1   1 1
No Yes Acinetobacter genomosp. 13TU RUH2624   1 1
No Yes Acinetobacter sp. SH024   1 1
No Yes Acinetobacter calcoaceticus ruh2202   1 1
No Yes Acinetobacter baumannii ZW85-1   1 1
No Yes Acinetobacter baumannii TYTH-1   1 1
No Yes Acinetobacter baumannii BJAB0868   1 1
No Yes Acinetobacter baumannii BJAB0715   1 1
No Yes Acinetobacter baumannii BJAB07104   1 1
No Yes Acinetobacter baumannii TCDC-AB0715   1 1
No Yes Acinetobacter baumannii D1279779   1 1
No Yes Acinetobacter baumannii MDR-TJ   1 1
No Yes Acinetobacter baumannii 1656-2   1 1
No Yes Acinetobacter baumannii ATCC 19606   1 1
No Yes Acinetobacter baumannii AB307-0294   1 1
No Yes Acinetobacter baumannii AYE   1 1
No Yes Acinetobacter baumannii MDR-ZJ06   1 1
No Yes Acinetobacter baumannii AB0057   1 1
No Yes Acinetobacter baumannii ACICU   1 1
No Yes Acinetobacter radioresistens SH164   1 1
No Yes Acinetobacter junii SH205   1 1
No Yes Acinetobacter johnsonii SH046   1 1
No Yes Acinetobacter lwoffii SH145   1 1
No Yes Cycloclasticus zancles 7-ME   1 1
No Yes Methanolobus psychrophilus R15   1 1
No Yes Haloarcula hispanica N601   1 1
No Yes 1_050719N (meta-genome)   4 4
No Yes 3_050719R (meta-genome)   2 2
No Yes 3_Below_base_of_euphotic (meta-genome)   1 1
No Yes 4_050719Q (meta-genome)   5 5
No Yes 5_050719P (meta-genome)   2 2
No Yes Activated sludge plasmid pool Morges-2009 (Newbler) (meta-genome)   10 10
No Yes Air microbial communities Singapore indoor air filters 1 (meta-genome)   1 1
No Yes Air microbial communities Singapore indoor air filters 2 (meta-genome)   1 1
No Yes Bath Hot Springs, filamentous community (meta-genome)   5 5
No Yes Combined (meta-genome)   5 5
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   3 3
No Yes Dump bottom (Dump bottom) (meta-genome)   3 3
No Yes Dump top (Dump top) (meta-genome)   7 7
No Yes Endophytic microbiome from Rice (meta-genome)   1 1
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #1 (meta-genome)   6 5
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   13 13
No Yes Fungus garden combined (combined) (meta-genome)   1 1
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   2 2
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   8 8
No Yes Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes   6 6
No Yes Guerrero Negro salt ponds hypersaline mat 01(G) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 02(H) (meta-genome)   5 5
No Yes Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome)   2 2
No Yes Guerrero Negro salt ponds hypersaline mat 04(N) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 05(O) (meta-genome)   3 3
No Yes Guerrero Negro salt ponds hypersaline mat 06(P) (meta-genome)   2 2
No Yes Hindgut microbiome of Nasutitermes sp. (Costa Rica) (meta-genome)   45 45
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP11 from Octopus Springs (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP12 from Calcite Springs, Tower Falls Region (meta-genome)   8 8
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP13 from Bechler Spring (meta-genome)   4 4
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP14 from OSP Spring (meta-genome)   4 4
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   12 12
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome)   3 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome)   4 4
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome)   8 8
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP3 from Monarch Geyser, Norris Geyser Basin (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome)   11 11
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome)   8 8
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP9 from Dragon Spring, Norris Geyser Basin (meta-genome)   2 2
No Yes Human Gut Community Subject 8 (meta-genome)   3 3
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   2 2
No Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome)   1 1
No Yes Marine anammox bioreactor enriched for Scalindua species (meta-genome)   5 5
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   62 62
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   8 8
No Yes Methylotrophic community from Lake Washington sediment Formate enrichment (meta-genome)   4 4
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   33 33
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   11 11
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)   8 8
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   1 1
No Yes Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome)   1 1
No Yes Mouse Gut Community ob1 (meta-genome)   1 1
No Yes NCBI 2017_08 genome   22789 22696
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   5 5
No Yes Olavius algarvensis endosymbiont metagenome Delta1 (meta-genome)   2 2
No Yes Olavius algarvensis endosymbiont metagenome Gamma3 (meta-genome)   2 2
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   17 17
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   8 8
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   11 10
No Yes Sludge/Australian, Phrap Assembly (meta-genome)   15 15
No Yes Sludge/US, Jazz Assembly (meta-genome)   14 14
No Yes Sludge/US, Phrap Assembly (meta-genome)   30 30
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   4 4
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   24 24
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   7 7
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   5 5
No Yes Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)   18 18
No Yes STRING v9.0.5 (STRING)   471 467
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   2 2
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome)   1 1
No Yes Termite Protist Endosymbiont Community (meta-genome)   1 1
No Yes Uniprot 2018_03 genome   7125 7014
No Yes Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)   6 6
No Yes Global Ocean Sampling Expedition (GOS)   36 34
No Yes NCBI plasmid sequences (Plasmids)   20 20
No Yes NCBI viral sequences (Viral)   2 2
No Yes PDB chains (SCOP 1.75) (PDB)   7 7
No Yes Protein Data Bank (all PDB sequenc)   52 52
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   135 135
No Yes TargetDB (Targets)   32 32

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