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ROP protein superfamily domain assignments
in
Monodelphis domestica 69_5

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Select to display   Genome       Domains   Proteins
No Yes ALL   10369 10369
No Yes Adineta vaga   1 1
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 1 1
No Yes Musa acuminata 22 Wild Malaysian banana 1 1
No Yes Sodalis glossinidius str. 'morsitans'   1 1
No Yes Erwinia pyrifoliae Ep1/96   2 2
No Yes Shigella sonnei Ss046   1 1
No Yes Citrobacter koseri ATCC BAA-895   1 1
No Yes Ascaris suum Victoria/Ghent Pig roundworm 1 1
No Yes Yersinia pestis biovar Microtus str. 91001   1 1
No Yes Yersinia pestis biovar Medievalis str. Harbin 35   1 1
No Yes Yersinia pestis Nepal516   2 2
No Yes Yersinia pestis Antiqua   2 2
No Yes Yersinia pestis CO92   1 1
No Yes Erwinia pyrifoliae DSM 12163   2 2
No Yes Shigella sonnei 53G   1 1
No Yes Shigella flexneri 2002017   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium var. 5- str. CFSAN001921   1 1
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. SL476   1 1
No Yes Klebsiella pneumoniae JM45   1 1
No Yes Klebsiella pneumoniae subsp. pneumoniae HS11286   1 1
No Yes Klebsiella pneumoniae subsp. pneumoniae MGH 78578   2 2
No Yes Klebsiella pneumoniae subsp. rhinoscleromatis SB3432   1 1
No Yes Enterobacter aerogenes EA1509E   1 1
No Yes Escherichia coli JJ1886   1 1
No Yes Escherichia coli NA114   1 1
No Yes Escherichia coli KO11FL   1 1
No Yes Escherichia coli KO11FL   1 1
No Yes Escherichia coli W   1 1
No Yes Escherichia coli W   1 1
No Yes Escherichia coli SMS-3-5   1 1
No Yes Escherichia coli SE11   2 2
No Yes Escherichia coli ETEC H10407   1 1
No Yes Escherichia coli O55:H7 str. RM12579   2 2
No Yes Escherichia coli O26:H11 str. 11368   2 2
No Yes Escherichia coli O111:H- str. 11128   1 1
No Yes Ricinus communis (Early assembly) Castor bean 1 1
No Yes 4_050719Q (meta-genome)   1 1
No Yes Activated sludge plasmid pool Morges-2009 (Newbler) (meta-genome)   2 2
No Yes Activated sludge plasmid pool Visp-2009 (Newbler) (meta-genome)   1 1
No Yes Combined (meta-genome)   2 2
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   1 1
No Yes Fungus garden combined (combined) (meta-genome)   2 2
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   2 2
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   3 3
No Yes Human Gut Community Subject 8 (meta-genome)   1 1
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   2 2
No Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome)   4 4
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   3 3
No Yes Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome)   4 4
No Yes NCBI 2017_08 genome   9457 9457
No Yes STRING v9.0.5 (STRING)   17 17
No Yes Switchgrass field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing switchgr (meta-genome)   4 4
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome)   3 3
No Yes Uniprot 2018_03 genome   523 523
No Yes Global Ocean Sampling Expedition (GOS)   11 11
No Yes NCBI plasmid sequences (Plasmids)   103 103
No Yes PDB chains (SCOP 1.75) (PDB)   7 7
No Yes Protein Data Bank (all PDB sequenc)   41 37
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   117 111
No Yes The Salmonella enterica Pan-genome (meta-genome)   2 2

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