SUPERFAMILY 1.75 HMM library and genome assignments server

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Phage repressors family domain assignments
in
all bacterial and archaeal genomes

Assignment details

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25 selected genomes have 37 significant domains in 37 proteins.

Showing genomes 1 to 25 of 38
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Escherichia coli 'BL21-Gold(DE3)pLysS AG' has 2 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|253774260|ref|YP_003037091.1|   5.81e-18   0.0000996   1-58   1rzs A:  
gi|253774261|ref|YP_003037092.1|   9.73e-17   0.0000685   1-70   1adr A:  
 
Weak hits:
gi|253771978|ref|YP_003034809.1|   5.06e-29   0.00042   3-72   1ner A:  
gi|253772141|ref|YP_003034972.1|   0.0000000315   0.056   69-126   1adr A:  
gi|253772590|ref|YP_003035421.1|   0.00000000965   0.043   14-83   1sq8 A:  
gi|253773470|ref|YP_003036301.1|   3.66e-16   0.0011   2-72   1adr A:  
gi|253773471|ref|YP_003036302.1|   0.00000000000484   0.0058   1-59   1rzs A:  
gi|253773587|ref|YP_003036418.1|   0.00000965   0.047   89-143   1r69 A:  

Salmonella enterica subsp. enterica Serovar Heidelberg str. CFSAN002069 has 2 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|525827654|ref|YP_008250322.1|   4.86e-16   0.0000472   1-70   1adr A:  
gi|525830348|ref|YP_008250321.1|   8.89e-18   0.0000907   1-58   1rzs A:  
 
Weak hits:
gi|525828919|ref|YP_008251898.1|   1.07e-28   0.0004   3-72   1ner A:  
gi|525829369|ref|YP_008252461.1|   2.95e-30   0.0008   2-73   1ner A:  
gi|525829472|ref|YP_008252580.1|   0.0000000231   0.043   14-83   1sq8 A:  
gi|525829596|ref|YP_008252735.1|   4.57e-30   0.00071   1-72   1ner A:  
gi|525829740|ref|YP_008252910.1|   0.0000000000504   0.054   7-66   2cro A:  
gi|525830222|ref|YP_008249646.1|   0.00000000337   0.079   4-63   1rzs A:  
gi|525830563|ref|YP_008251410.1|   0.0000000000509   0.063   52-106   1adr A:  

Salmonella enterica subsp. enterica serovar Heidelberg str. B182 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|386590222|ref|YP_006086622.1|   4.86e-16   0.0000472   1-70   1adr A:  
 
Weak hits:
gi|386590880|ref|YP_006087280.1|   0.00000000337   0.079   4-63   1rzs A:  
gi|386592006|ref|YP_006088406.1|   0.0000000000504   0.054   7-66   2cro A:  
gi|386592183|ref|YP_006088583.1|   4.57e-30   0.00071   1-72   1ner A:  
gi|386592329|ref|YP_006088729.1|   0.0000000231   0.043   14-83   1sq8 A:  
gi|386592446|ref|YP_006088846.1|   2.95e-30   0.0008   2-73   1ner A:  
gi|386592991|ref|YP_006089391.1|   1.07e-28   0.0004   3-72   1ner A:  
gi|386593450|ref|YP_006089850.1|   0.0000000000509   0.063   52-106   1adr A:  
gi|386593573|ref|YP_006089972.1|   0.00389   0.075   6-41   2cro A:  

Salmonella enterica subsp. enterica serovar Heidelberg str. 41578 has 2 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|525816213|ref|YP_008246231.1|   4.86e-16   0.0000472   1-70   1adr A:  
gi|525816214|ref|YP_008246232.1|   8.89e-18   0.0000907   1-58   1rzs A:  
 
Weak hits:
gi|525814582|ref|YP_008244600.1|   1.07e-28   0.0004   3-72   1ner A:  
gi|525815063|ref|YP_008245081.1|   0.0000000000509   0.063   52-106   1adr A:  
gi|525816899|ref|YP_008246917.1|   0.00000000337   0.079   4-63   1rzs A:  
gi|525818085|ref|YP_008248103.1|   0.0000000000504   0.054   7-66   2cro A:  
gi|525818262|ref|YP_008248280.1|   4.57e-30   0.00071   1-72   1ner A:  
gi|525818420|ref|YP_008248438.1|   0.0000000231   0.043   14-83   1sq8 A:  
gi|525818540|ref|YP_008248558.1|   2.95e-30   0.0008   2-73   1ner A:  

Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|194451869|ref|YP_002044323.1|   4.86e-16   0.0000472   1-70   1adr A:  
 
Weak hits:
gi|194449644|ref|YP_002047809.1|   0.0000000000509   0.063   52-106   1adr A:  
gi|194450209|ref|YP_002047212.1|   0.00309   0.04   11-38   1rzs A:  
gi|194450890|ref|YP_002046430.1|   4.57e-30   0.00071   1-72   1ner A:  
gi|194451427|ref|YP_002046707.1|   2.95e-30   0.0008   2-73   1ner A:  
gi|194451759|ref|YP_002046248.1|   0.0000000000504   0.054   7-66   2cro A:  
gi|194451943|ref|YP_002046582.1|   0.0000000231   0.043   14-83   1sq8 A:  
gi|194451945|ref|YP_002047335.1|   1.07e-28   0.0004   3-72   1ner A:  

Escherichia coli LY180 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|544389125|ref|YP_008563462.1|   8.44e-28   0.0000209   4-73   1ner A:  
 
Weak hits:
gi|544390047|ref|YP_008564495.1|   0.000489   0.08   15-64   1rzs A:  
gi|544390110|ref|YP_008564604.1|   0.0000844   0.042   89-143   1r69 A:  
gi|544390223|ref|YP_008564742.1|   0.0000000000247   0.0083   1-60   1rzs A:  
gi|544390224|ref|YP_008564743.1|   2.56e-17   0.00099   4-74   1adr A:  
gi|544391080|ref|YP_008565660.1|   0.00000000965   0.043   14-83   1sq8 A:  
gi|544391673|ref|YP_008566354.1|   5.06e-29   0.00042   3-72   1ner A:  
gi|544392926|ref|YP_008564494.1|   0.0000000059   0.03   10-80   1adr A:  

Escherichia coli O7:K1 str. CE10 has 2 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|386623407|ref|YP_006143135.1|   1.3e-20   0.0000149   4-95   1rio A:  
gi|386623408|ref|YP_006143136.1|   5.76e-29   0.0000196   1-65   1cop D:  
 
Weak hits:
gi|386622391|ref|YP_006147220.1|   0.00000000333   0.042   4-62   1adr A:  
gi|386623236|ref|YP_006142964.1|   0.0000000000456   0.028   47-96   1adr A:  
gi|386623409|ref|YP_006143137.1|   0.000619   0.085   16-54   1rzs A:  
gi|386624807|ref|YP_006144535.1|   0.00000000000000512   0.011   2-70   1adr A:  
gi|386624808|ref|YP_006144536.1|   7.35e-16   0.034   67-132   1adr A:  
gi|386625231|ref|YP_006144959.1|   0.00201   0.059   21-67   1rzs A:  
gi|386625253|ref|YP_006144981.1|   0.00000000965   0.043   14-83   1sq8 A:  
gi|386625831|ref|YP_006145559.1|   0.0000000315   0.056   69-126   1adr A:  
gi|386625994|ref|YP_006145722.1|   7.87e-29   0.00043   3-72   1ner A:  
gi|386626560|ref|YP_006146288.1|   0.0000000000402   0.051   52-106   1adr A:  
gi|386627344|ref|YP_006147072.1|   0.00000000563   0.02   2-50   1sq8 A:  

Escherichia coli O104:H4 str. 2009EL-2050 has 2 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|410482566|ref|YP_006770112.1|   5.07e-20   0.0000125   4-95   1rio A:  
gi|410482567|ref|YP_006770113.1|   7.31e-28   0.000044   1-65   1cop D:  
 
Weak hits:
gi|410480742|ref|YP_006768288.1|   5.06e-29   0.00042   3-72   1ner A:  
gi|410481492|ref|YP_006769038.1|   0.00000000965   0.043   14-83   1sq8 A:  
gi|410482162|ref|YP_006769708.1|   0.0000000000000384   0.055   1-66   1sq8 A:  
gi|410482568|ref|YP_006770114.1|   0.000253   0.064   17-53   1rzs A:  
gi|410482579|ref|YP_006770125.1|   0.0000000000252   0.027   48-98   1adr A:  
gi|410482750|ref|YP_006770296.1|   0.00000965   0.047   89-143   1r69 A:  
gi|410482953|ref|YP_006770499.1|   0.000619   0.068   15-64   1rzs A:  
gi|410482954|ref|YP_006770500.1|   0.0000000059   0.03   10-80   1adr A:  
gi|410483314|ref|YP_006770860.1|   1.07e-25   0.0012   3-66   1cop D:  
gi|410483315|ref|YP_006770861.1|   1.07e-22   0.00027   3-91   1rio A:  
gi|410483625|ref|YP_006771171.1|   0.000000000000622   0.037   5-64   1rzs A:  
gi|410483626|ref|YP_006771172.1|   0.00000000000000563   0.016   2-70   1sq8 A:  

Escherichia coli O104:H4 str. 2009EL-2071 has 2 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|407469321|ref|YP_006784237.1|   7.31e-28   0.000044   1-65   1cop D:  
gi|407469322|ref|YP_006784236.1|   5.07e-20   0.0000125   4-95   1rio A:  
 
Weak hits:
gi|407468193|ref|YP_006785365.1|   0.00000000000000563   0.016   2-70   1sq8 A:  
gi|407468194|ref|YP_006785364.1|   0.000000000000622   0.037   5-64   1rzs A:  
gi|407468507|ref|YP_006785051.1|   1.07e-22   0.00027   3-91   1rio A:  
gi|407468508|ref|YP_006785050.1|   1.07e-25   0.0012   3-66   1cop D:  
gi|407468763|ref|YP_006784795.1|   7.6e-20   0.0097   2-84   1rio A:  
gi|407468933|ref|YP_006784625.1|   0.0000000059   0.03   10-80   1adr A:  
gi|407468934|ref|YP_006784624.1|   0.000619   0.068   15-64   1rzs A:  
gi|407469137|ref|YP_006784421.1|   0.00000965   0.047   89-143   1r69 A:  
gi|407469309|ref|YP_006784249.1|   0.0000000000252   0.027   48-98   1adr A:  
gi|407469320|ref|YP_006784238.1|   0.000253   0.064   17-53   1rzs A:  
gi|407469723|ref|YP_006783834.1|   0.0000000000000384   0.055   1-66   1sq8 A:  
gi|407470412|ref|YP_006783145.1|   0.00000000965   0.043   14-83   1sq8 A:  
gi|407471162|ref|YP_006782395.1|   5.06e-29   0.00042   3-72   1ner A:  

Escherichia coli O104:H4 str. 2011C-3493 has 2 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|407482016|ref|YP_006779165.1|   5.07e-20   0.0000125   4-95   1rio A:  
gi|407482017|ref|YP_006779166.1|   7.31e-28   0.000044   1-65   1cop D:  
 
Weak hits:
gi|407480181|ref|YP_006777330.1|   5.06e-29   0.00042   3-72   1ner A:  
gi|407480926|ref|YP_006778075.1|   0.00000000965   0.043   14-83   1sq8 A:  
gi|407481612|ref|YP_006778761.1|   0.0000000000000384   0.055   1-66   1sq8 A:  
gi|407482018|ref|YP_006779167.1|   0.000253   0.064   17-53   1rzs A:  
gi|407482029|ref|YP_006779178.1|   0.0000000000252   0.027   48-98   1adr A:  
gi|407482200|ref|YP_006779349.1|   0.00000965   0.047   89-143   1r69 A:  
gi|407482400|ref|YP_006779549.1|   0.000619   0.068   15-64   1rzs A:  
gi|407482401|ref|YP_006779550.1|   0.0000000059   0.03   10-80   1adr A:  
gi|407482762|ref|YP_006779911.1|   1.07e-25   0.0012   3-66   1cop D:  
gi|407482763|ref|YP_006779912.1|   1.07e-22   0.00027   3-91   1rio A:  
gi|407483072|ref|YP_006780221.1|   0.000000000000622   0.037   5-64   1rzs A:  
gi|407483073|ref|YP_006780222.1|   0.00000000000000563   0.016   2-70   1sq8 A:  

Escherichia coli UM146 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|386603590|ref|YP_006109890.1|   2.63e-16   0.0000952   1-70   1adr A:  
 
Weak hits:
gi|386602729|ref|YP_006109029.1|   1.24e-27   0.00037   3-72   1ner A:  
gi|386603444|ref|YP_006109744.1|   0.00000000965   0.043   14-83   1sq8 A:  
gi|386603591|ref|YP_006109891.1|   4.87e-18   0.00011   1-57   1rzs A:  
gi|386604730|ref|YP_006111030.1|   0.000000000000231   0.008   1-59   1rzs A:  
gi|386604731|ref|YP_006111031.1|   0.00000000282   0.01   2-69   1r69 A:  
gi|386604888|ref|YP_006111188.1|   0.000444   0.085   16-54   1rzs A:  
gi|386604889|ref|YP_006111189.1|   0.00000000000182   0.044   60-109   1adr A:  
gi|386604890|ref|YP_006111190.1|   0.0000000000000724   0.051   5-75   1rio A:  

Escherichia coli 042 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|387606270|ref|YP_006095126.1|   0.00000000000000536   0.0001   4-63   2cro A:  
 
Weak hits:
gi|387606269|ref|YP_006095125.1|   0.00000000000000115   0.00019   3-62   1r69 A:  
gi|387606386|ref|YP_006095242.1|   0.0000000000456   0.028   47-96   1adr A:  
gi|387606774|ref|YP_006095630.1|   8.31e-18   0.026   13-92   1rio A:  
gi|387606932|ref|YP_006095788.1|   0.0000222   0.039   3-44   1adr A:  
gi|387606933|ref|YP_006095789.1|   0.000489   0.08   15-64   1rzs A:  
gi|387607023|ref|YP_006095879.1|   0.00000683   0.04   89-143   1r69 A:  
gi|387607175|ref|YP_006096031.1|   0.0000000000247   0.0083   1-60   1rzs A:  
gi|387607176|ref|YP_006096032.1|   2.56e-17   0.00099   4-74   1adr A:  
gi|387607649|ref|YP_006096505.1|   0.0000000169   0.01   3-69   1r69 A:  
gi|387608166|ref|YP_006097022.1|   0.00000000965   0.043   14-83   1sq8 A:  
gi|387608910|ref|YP_006097766.1|   7.87e-29   0.00043   3-72   1ner A:  
gi|387609444|ref|YP_006098300.1|   0.0000000000402   0.051   52-106   1adr A:  

Escherichia coli Xuzhou21 has 2 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|387880828|ref|YP_006311130.1|   5.07e-20   0.0000125   4-95   1rio A:  
gi|387880829|ref|YP_006311131.1|   5.76e-29   0.0000196   1-65   1cop D:  
 
Weak hits:
gi|387881444|ref|YP_006311746.1|   0.0000000000456   0.028   47-96   1adr A:  
gi|387881592|ref|YP_006311894.1|   0.0000000000000208   0.015   11-73   1r69 A:  
gi|387881593|ref|YP_006311895.1|   0.00000163   0.058   14-63   1rzs A:  
gi|387881706|ref|YP_006312008.1|   0.0000113   0.026   6-76   1adr A:  
gi|387881707|ref|YP_006312009.1|   0.00000219   0.033   12-64   1rzs A:  
gi|387882010|ref|YP_006312312.1|   0.0107   0.087   17-69   1rzs A:  
gi|387882011|ref|YP_006312313.1|   0.00000000000000563   0.026   8-69   1rzs A:  
gi|387882261|ref|YP_006312563.1|   0.00000000000000206   0.00065   3-71   1adr A:  
gi|387882262|ref|YP_006312564.1|   0.000000000000366   0.0057   1-59   1rzs A:  
gi|387882454|ref|YP_006312756.1|   0.00000965   0.047   89-143   1r69 A:  
gi|387882613|ref|YP_006312915.1|   0.000000000000214   0.0094   1-59   1rzs A:  
gi|387883120|ref|YP_006313422.1|   0.0000000000675   0.024   1-61   1rzs A:  
gi|387883121|ref|YP_006313423.1|   0.00000000000000282   0.017   1-70   1adr A:  
gi|387883710|ref|YP_006314012.1|   0.00000000965   0.043   14-83   1sq8 A:  
gi|387884372|ref|YP_006314674.1|   5.06e-29   0.00042   3-72   1ner A:  
gi|387884895|ref|YP_006315197.1|   0.0000000000402   0.051   52-106   1adr A:  

Escherichia coli IHE3034 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|386600306|ref|YP_006101812.1|   2.63e-16   0.0000952   1-70   1adr A:  
 
Weak hits:
gi|386598256|ref|YP_006099762.1|   0.0000000158   0.087   28-93   1r69 A:  
gi|386598960|ref|YP_006100466.1|   0.0000000000000724   0.051   5-75   1rio A:  
gi|386598961|ref|YP_006100467.1|   0.000444   0.085   16-54   1rzs A:  
gi|386599111|ref|YP_006100617.1|   0.00000000282   0.01   2-69   1r69 A:  
gi|386599287|ref|YP_006100793.1|   0.000000563   0.087   11-65   1r69 A:  
gi|386599800|ref|YP_006101306.1|   0.0000000000000118   0.015   3-65   1r69 A:  
gi|386600305|ref|YP_006101811.1|   4.87e-18   0.00011   1-57   1rzs A:  
gi|386600474|ref|YP_006101980.1|   0.00201   0.059   21-67   1rzs A:  
gi|386600494|ref|YP_006102000.1|   0.00000000965   0.043   14-83   1sq8 A:  
gi|386601214|ref|YP_006102720.1|   1.24e-27   0.00037   3-72   1ner A:  

Escherichia coli UMNK88 has 2 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|386615006|ref|YP_006134672.1|   1.66e-28   0.0000411   1-65   1cop D:  
gi|386615007|ref|YP_006134673.1|   5.91e-20   0.0000129   4-95   1rio A:  
 
Weak hits:
gi|386613935|ref|YP_006133601.1|   0.00000683   0.047   67-121   1r69 A:  
gi|386614112|ref|YP_006133778.1|   0.0000000000247   0.0083   1-60   1rzs A:  
gi|386615200|ref|YP_006134866.1|   0.00201   0.059   21-67   1rzs A:  
gi|386615219|ref|YP_006134885.1|   0.00000000965   0.043   14-83   1sq8 A:  
gi|386615809|ref|YP_006135475.1|   0.0000000315   0.056   69-126   1adr A:  
gi|386615976|ref|YP_006135642.1|   5.06e-29   0.00042   3-72   1ner A:  
gi|386617510|ref|YP_006142137.1|   1.01e-17   0.01   11-78   1ner A:  

Escherichia coli O83:H1 str. NRG 857C has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|387616258|ref|YP_006119280.1|   2.63e-16   0.0000952   1-70   1adr A:  
 
Weak hits:
gi|387616259|ref|YP_006119281.1|   4.87e-18   0.00011   1-57   1rzs A:  
gi|387616451|ref|YP_006119473.1|   0.000000356   0.017   1-50   1sq8 A:  
gi|387616452|ref|YP_006119474.1|   0.00000000000005   0.069   5-64   1rzs A:  
gi|387616758|ref|YP_006119780.1|   0.00000152   0.069   9-63   1r69 A:  
gi|387616909|ref|YP_006119931.1|   0.00000000000152   0.0057   1-59   1rzs A:  
gi|387616910|ref|YP_006119932.1|   3.66e-16   0.0011   2-72   1adr A:  
gi|387617331|ref|YP_006120353.1|   3.02e-29   0.00038   3-67   1ner A:  
gi|387617832|ref|YP_006120854.1|   0.00000000965   0.043   14-83   1sq8 A:  
gi|387618484|ref|YP_006121506.1|   5.06e-29   0.00042   3-72   1ner A:  

Escherichia coli KO11FL has 2 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|378714348|ref|YP_005279241.1|   8.44e-28   0.0000209   4-73   1ner A:  
gi|378714891|ref|YP_005279784.1|   8.44e-28   0.0000209   4-73   1ner A:  
 
Weak hits:
gi|378711357|ref|YP_005276250.1|   5.06e-29   0.00042   3-72   1ner A:  
gi|378712023|ref|YP_005276916.1|   0.00000000965   0.043   14-83   1sq8 A:  
gi|378712180|ref|YP_005277073.1|   0.000000000000158   0.054   5-69   1rio A:  
gi|378712181|ref|YP_005277074.1|   0.000000000000416   0.044   12-61   1adr A:  
gi|378712995|ref|YP_005277888.1|   2.56e-17   0.00099   4-74   1adr A:  
gi|378712996|ref|YP_005277889.1|   0.0000000000247   0.0083   1-60   1rzs A:  
gi|378713157|ref|YP_005278050.1|   0.0000844   0.042   89-143   1r69 A:  
gi|378713265|ref|YP_005278158.1|   0.000489   0.08   15-64   1rzs A:  
gi|378713266|ref|YP_005278159.1|   0.0000000059   0.03   10-80   1adr A:  

Escherichia coli KO11FL has 2 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|378714348|ref|YP_005279241.1|   8.44e-28   0.0000209   4-73   1ner A:  
gi|378714891|ref|YP_005279784.1|   8.44e-28   0.0000209   4-73   1ner A:  
 
Weak hits:
gi|378711357|ref|YP_005276250.1|   5.06e-29   0.00042   3-72   1ner A:  
gi|378712023|ref|YP_005276916.1|   0.00000000965   0.043   14-83   1sq8 A:  
gi|378712180|ref|YP_005277073.1|   0.000000000000158   0.054   5-69   1rio A:  
gi|378712181|ref|YP_005277074.1|   0.000000000000416   0.044   12-61   1adr A:  
gi|378712995|ref|YP_005277888.1|   2.56e-17   0.00099   4-74   1adr A:  
gi|378712996|ref|YP_005277889.1|   0.0000000000247   0.0083   1-60   1rzs A:  
gi|378713157|ref|YP_005278050.1|   0.0000844   0.042   89-143   1r69 A:  
gi|378713265|ref|YP_005278158.1|   0.000489   0.08   15-64   1rzs A:  
gi|378713266|ref|YP_005278159.1|   0.0000000059   0.03   10-80   1adr A:  

Escherichia coli LF82 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|222155718|ref|YP_002555857.1|   3.07e-16   0.0000952   1-70   1adr A:  
 
Weak hits:
gi|222155719|ref|YP_002555858.1|   4.87e-18   0.00011   1-57   1rzs A:  
gi|222155897|ref|YP_002556036.1|   0.00000000000682   0.015   3-68   1sq8 A:  
gi|222156181|ref|YP_002556320.1|   0.00000173   0.069   11-65   1r69 A:  
gi|222156324|ref|YP_002556463.1|   0.00124   0.068   39-88   1rzs A:  
gi|222156325|ref|YP_002556464.1|   0.0000000059   0.03   10-80   1adr A:  
gi|222157222|ref|YP_002557361.1|   0.00000000965   0.043   14-83   1sq8 A:  
gi|222157900|ref|YP_002558039.1|   5.06e-29   0.00042   3-72   1ner A:  
gi|387823204|ref|YP_006118313.1|   0.00000000000005   0.069   5-64   1rzs A:  
gi|387823214|ref|YP_006118323.1|   3.66e-29   0.00038   2-66   1ner A:  

Escherichia coli ED1a has 2 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|218688908|ref|YP_002397120.1|   5.07e-20   0.0000125   4-95   1rio A:  
gi|218688909|ref|YP_002397121.1|   7.31e-28   0.000044   1-65   1cop D:  
 
Weak hits:
gi|218688818|ref|YP_002397030.1|   6.19e-20   0.0091   2-84   1rio A:  
gi|218688910|ref|YP_002397122.1|   0.000253   0.064   17-53   1rzs A:  
gi|218688918|ref|YP_002397130.1|   0.000000000000921   0.061   28-101   1sq8 A:  
gi|218689855|ref|YP_002398067.1|   0.0000000000000461   0.055   1-66   1sq8 A:  
gi|218690636|ref|YP_002398848.1|   0.00000000965   0.043   14-83   1sq8 A:  
gi|218690768|ref|YP_002398980.1|   0.00000178   0.092   81-127   1adr A:  
gi|218691478|ref|YP_002399690.1|   5.06e-29   0.00042   3-72   1ner A:  

Escherichia coli 55989 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|218695990|ref|YP_002403657.1|   2.63e-16   0.0000952   1-70   1adr A:  
 
Weak hits:
gi|218694199|ref|YP_002401866.1|   0.00000000000000322   0.018   22-92   1sq8 A:  
gi|218694200|ref|YP_002401867.1|   0.000000000000622   0.037   5-64   1rzs A:  
gi|218694455|ref|YP_002402122.1|   0.00000000000000206   0.00065   3-71   1adr A:  
gi|218694456|ref|YP_002402123.1|   0.000000000000371   0.0058   1-59   1rzs A:  
gi|218694781|ref|YP_002402448.1|   9.47e-18   0.003   17-89   1adr A:  
gi|218694782|ref|YP_002402449.1|   0.00000000000000281   0.0036   10-68   1rzs A:  
gi|218694979|ref|YP_002402646.1|   0.00000965   0.047   89-143   1r69 A:  
gi|218695132|ref|YP_002402799.1|   0.00000000000506   0.0058   2-60   1rzs A:  
gi|218695133|ref|YP_002402800.1|   3.66e-16   0.0011   2-72   1adr A:  
gi|218695476|ref|YP_002403143.1|   0.000000000429   0.034   2-66   1adr A:  
gi|218695989|ref|YP_002403656.1|   4.87e-18   0.00011   1-57   1rzs A:  
gi|218696143|ref|YP_002403810.1|   0.00000000965   0.043   14-83   1sq8 A:  
gi|218696893|ref|YP_002404560.1|   5.06e-29   0.00042   3-72   1ner A:  

Escherichia coli S88 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|218559304|ref|YP_002392217.1|   2.63e-16   0.0000952   1-70   1adr A:  
 
Weak hits:
gi|218557450|ref|YP_002390363.1|   0.0000000000000461   0.055   1-66   1sq8 A:  
gi|218558038|ref|YP_002390951.1|   0.0000000000000209   0.054   15-91   1rio A:  
gi|218558039|ref|YP_002390952.1|   0.00000000000182   0.044   60-109   1adr A:  
gi|218558040|ref|YP_002390953.1|   0.000444   0.085   16-54   1rzs A:  
gi|218558195|ref|YP_002391108.1|   0.00000000282   0.01   2-69   1r69 A:  
gi|218558196|ref|YP_002391109.1|   0.000000000000422   0.008   17-75   1rzs A:  
gi|218559303|ref|YP_002392216.1|   4.87e-18   0.00011   1-57   1rzs A:  
gi|218559442|ref|YP_002392355.1|   0.00000000965   0.043   14-83   1sq8 A:  
gi|218560258|ref|YP_002393171.1|   1.24e-27   0.00037   3-72   1ner A:  
gi|218561557|ref|YP_002394470.1|   0.0000000000000384   0.055   1-66   1sq8 A:  

Escherichia coli W has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|386708044|ref|YP_006171765.1|   8.44e-28   0.0000209   4-73   1ner A:  
 
Weak hits:
gi|386709151|ref|YP_006172872.1|   0.0000000059   0.03   10-80   1adr A:  
gi|386709152|ref|YP_006172873.1|   0.000489   0.08   15-64   1rzs A:  
gi|386709261|ref|YP_006172982.1|   0.0000844   0.042   89-143   1r69 A:  
gi|386709426|ref|YP_006173147.1|   0.0000000000247   0.0083   1-60   1rzs A:  
gi|386709427|ref|YP_006173148.1|   2.56e-17   0.00099   4-74   1adr A:  
gi|386710247|ref|YP_006173968.1|   0.00000000000182   0.044   60-109   1adr A:  
gi|386710248|ref|YP_006173969.1|   0.000000000000158   0.054   5-69   1rio A:  
gi|386710406|ref|YP_006174127.1|   0.00000000965   0.043   14-83   1sq8 A:  
gi|386711095|ref|YP_006174816.1|   5.06e-29   0.00042   3-72   1ner A:  

Escherichia coli W has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|386708044|ref|YP_006171765.1|   8.44e-28   0.0000209   4-73   1ner A:  
 
Weak hits:
gi|386709151|ref|YP_006172872.1|   0.0000000059   0.03   10-80   1adr A:  
gi|386709152|ref|YP_006172873.1|   0.000489   0.08   15-64   1rzs A:  
gi|386709261|ref|YP_006172982.1|   0.0000844   0.042   89-143   1r69 A:  
gi|386709426|ref|YP_006173147.1|   0.0000000000247   0.0083   1-60   1rzs A:  
gi|386709427|ref|YP_006173148.1|   2.56e-17   0.00099   4-74   1adr A:  
gi|386710247|ref|YP_006173968.1|   0.00000000000182   0.044   60-109   1adr A:  
gi|386710248|ref|YP_006173969.1|   0.000000000000158   0.054   5-69   1rio A:  
gi|386710406|ref|YP_006174127.1|   0.00000000965   0.043   14-83   1sq8 A:  
gi|386711095|ref|YP_006174816.1|   5.06e-29   0.00042   3-72   1ner A:  

Escherichia coli BL21(DE3) has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|387823324|ref|YP_006094184.1|   9.73e-17   0.0000685   1-70   1adr A:  
 
Weak hits:
gi|251784918|ref|YP_002999222.1|   0.00000965   0.047   89-143   1r69 A:  
gi|251785031|ref|YP_002999335.1|   3.66e-16   0.0011   2-72   1adr A:  
gi|251785841|ref|YP_003000145.1|   0.00000000965   0.043   14-83   1sq8 A:  
gi|251786300|ref|YP_003000604.1|   0.0000000315   0.056   69-126   1adr A:  
gi|251786458|ref|YP_003000762.1|   5.06e-29   0.00042   3-72   1ner A:  

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Select to display   Genome       Domains   Proteins
No Yes ALL   5686 5686
No Yes Adineta vaga   1 1
No Yes Amphimedon queenslandica   1 1
No Yes Escherichia coli 'BL21-Gold(DE3)pLysS AG'   2 2
No Yes Salmonella enterica subsp. enterica Serovar Heidelberg str. CFSAN002069   2 2
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. B182   1 1
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. 41578   2 2
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. SL476   1 1
No Yes Escherichia coli LY180   1 1
No Yes Escherichia coli O7:K1 str. CE10   2 2
No Yes Escherichia coli O104:H4 str. 2009EL-2050   2 2
No Yes Escherichia coli O104:H4 str. 2009EL-2071   2 2
No Yes Escherichia coli O104:H4 str. 2011C-3493   2 2
No Yes Escherichia coli UM146   1 1
No Yes Escherichia coli 042   1 1
No Yes Escherichia coli Xuzhou21   2 2
No Yes Escherichia coli IHE3034   1 1
No Yes Escherichia coli UMNK88   2 2
No Yes Escherichia coli O83:H1 str. NRG 857C   1 1
No Yes Escherichia coli KO11FL   2 2
No Yes Escherichia coli KO11FL   2 2
No Yes Escherichia coli LF82   1 1
No Yes Escherichia coli ED1a   2 2
No Yes Escherichia coli 55989   1 1
No Yes Escherichia coli S88   1 1
No Yes Escherichia coli W   1 1
No Yes Escherichia coli W   1 1
No Yes Escherichia coli BL21(DE3)   1 1
No Yes Escherichia coli BL21(DE3)   1 1
No Yes Escherichia coli APEC O1   1 1
No Yes Escherichia coli UTI89   1 1
No Yes Escherichia coli HS   2 2
No Yes Escherichia coli O55:H7 str. CB9615   3 3
No Yes Escherichia coli O26:H11 str. 11368   2 2
No Yes Escherichia coli O127:H6 str. E2348/69   2 2
No Yes Escherichia coli O157:H7 str. TW14359   2 2
No Yes Escherichia coli O157:H7 str. EC4115   2 2
No Yes Escherichia coli O157:H7 str. Sakai   2 2
No Yes Escherichia coli O157:H7 str. EDL933   1 1
No Yes Escherichia coli BW2952   2 2
No Yes Enterobacter cloacae subsp. cloacae ATCC 13047   1 1
No Yes Activated sludge plasmid pool Visp-2009 (Newbler) (meta-genome)   1 1
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome)   2 2
No Yes NCBI 2017_08 genome   5081 5081
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   24 24
No Yes Uniprot 2018_03 genome   231 231
No Yes NCBI viral sequences (Viral)   27 27
No Yes PDB chains (SCOP 1.75) (PDB)   14 14
No Yes Protein Data Bank (all PDB sequenc)   52 52
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   141 141
No Yes The Salmonella enterica Pan-genome (meta-genome)   2 2
No Yes UniProt viral sequences (Viral)   35 35

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