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EF-hand modules in multidomain proteins family domain assignments


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Select to display   Genome       Domains   Proteins
No Yes ALL   19872 19872
No Yes Homo sapiens 76_38 Human 81 61
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 14 12
No Yes Gorilla gorilla 76_3.1 Western gorilla 21 17
No Yes Pongo abelii 76_2 Sumatran orangutan 14 11
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 15 12
No Yes Papio anubis 76 Olive baboon 14 12
No Yes Macaca mulatta 76_1 Rhesus monkey 43 30
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 32 26
No Yes Otolemur garnettii 76_3 Small-eared galago 15 12
No Yes Microcebus murinus 76_1 Gray mouse lemur 12 9
No Yes Rattus norvegicus 76_5.0 Norway rat 13 11
No Yes Mus musculus 76_38 House mouse 29 21
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 13 11
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 16 12
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 18 14
No Yes Cavia porcellus 76_3 Domestic guinea pig 15 12
No Yes Oryctolagus cuniculus 76_2 Rabbit 15 11
No Yes Ochotona princeps 76 American pika 12 11
No Yes Tupaia belangeri 76 Northern tree shrew 15 12
No Yes Sus scrofa 76_10.2 Pig 26 18
No Yes Bos taurus 76_3.1 Cattle 16 13
No Yes Ovis aries 76_3.1 Sheep 19 15
No Yes Vicugna pacos 76_1 Alpaca 10 9
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 14 11
No Yes Mustela putorius furo 76_1.0 Domestic ferret 15 12
No Yes Ailuropoda melanoleuca 76_1 Giant panda 15 12
No Yes Canis familiaris 76_3.1 Dog 28 21
No Yes Felis catus 76_6.2 Domestic cat 18 14
No Yes Equus caballus 76_2 Horse 20 16
No Yes Myotis lucifugus 76_2.0 Little brown bat 16 13
No Yes Pteropus vampyrus 76_1 Large flying fox 15 12
No Yes Sorex araneus 76_1 European shrew 6 6
No Yes Erinaceus europaeus 76 Western European hedgehog 10 8
No Yes Procavia capensis 76_1 Cape rock hyrax 13 11
No Yes Loxodonta africana 76_3 African savanna elephant 25 20
No Yes Echinops telfairi 76 Small Madagascar hedgehog 8 6
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 20 16
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 6 5
No Yes Macropus eugenii 76_1.0 Tammar wallaby 7 6
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 16 13
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 15 11
No Yes Ornithorhynchus anatinus 76_5 Platypus 11 10
No Yes Saccoglossus kowalevskii v3.0   4 4
No Yes Petromyzon marinus 76_7.0 Sea lamprey 7 5
No Yes Meleagris gallopavo 76_2 Turkey 12 9
No Yes Gallus gallus 76_4 Chicken 12 9
No Yes Anas platyrhynchos 76_1.0 Mallard 14 10
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 12 9
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 12 9
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 21 16
No Yes Anolis carolinensis 76_2.0 Green anole 14 11
No Yes Xenopus laevis African clawed frog 32 28
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 16 12
No Yes Latimeria chalumnae 76_1 Coelacanth 20 15
No Yes Lepisosteus oculatus 76 Spotted gar 18 13
No Yes Gadus morhua 76_1 Atlantic cod 15 13
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 25 20
No Yes Takifugu rubripes 76_4 Torafugu 78 60
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 19 16
No Yes Oryzias latipes 76_1 Japanese medaka 22 17
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 16 13
No Yes Poecilia formosa 76 Amazon molly 16 14
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 24 21
No Yes Astyanax mexicanus 76 Mexican tetra 16 12
No Yes Danio rerio 76_9 Zebrafish 25 18
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 5 3
No Yes Ciona intestinalis 76 Vase tunicate 2 2
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 2 1
No Yes Adineta vaga   3 3
No Yes Octopus bimaculoides 280   5 3
No Yes Crassostrea gigas 22 Pacific oyster 4 3
No Yes Lottia gigantea Owl limpet 4 3
No Yes Helobdella robusta   2 2
No Yes Capitella sp. I   4 3
No Yes Danaus plexippus OGS1.0 Monarch butterfly 2 2
No Yes Heliconius melpomene Postman butterfly 2 1
No Yes Nasonia vitripennis Jewel wasp 1 1
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 7 5
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 3 2
No Yes Linepithema humile v1.1 Argentine ant 3 2
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 2 1
No Yes Solenopsis invicta v.2.2.3 Red fire ant 3 2
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 3 2
No Yes Atta cephalotes v1.1   2 1
No Yes Camponotus floridanus v3.3 Florida carpenter ant 1 1
No Yes Lucilia cuprina Australian sheep blowfly 3 2
No Yes Drosophila grimshawi 1.3   4 3
No Yes Drosophila willistoni 1.3   4 3
No Yes Drosophila pseudoobscura 2.13   4 3
No Yes Drosophila persimilis 1.3   2 1
No Yes Drosophila suzukii   6 3
No Yes Drosophila yakuba 1.3   4 3
No Yes Drosophila simulans 1.3   4 3
No Yes Drosophila sechellia 1.3   3 2
No Yes Drosophila melanogaster 76_5 Fruit fly 24 16
No Yes Drosophila erecta 1.3   4 3
No Yes Drosophila ananassae 1.3   5 4
No Yes Drosophila virilis 1.2   4 3
No Yes Drosophila mojavensis 1.3   4 3
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 3 2
No Yes Culex pipiens quinquefasciatus Southern house mosquito 2 1
No Yes Anopheles gambiae 49_3j African malaria mosquito 5 4
No Yes Tribolium castaneum 3.0 Red flour beetle 3 2
No Yes Pediculus humanus corporis (Early assembly) Human body louse 4 3
No Yes Acyrthosiphon pisum Pea aphid 3 2
No Yes Rhodnius prolixus 22   1 1
No Yes Daphnia pulex Common water flea 2 1
No Yes Strigamia maritima 22   3 2
No Yes Sarcoptes scabiei   1 1
No Yes Tetranychus urticae Two-spotted spider mite 5 3
No Yes Ixodes scapularis (Preliminary) Black-legged tick 4 3
No Yes Meloidogyne incognita Southern root-knot nematode 1 1
No Yes Onchocerca volvulus 22   2 2
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 2 2
No Yes Trichinella spiralis 22   2 2
No Yes Acropora digitifera v1.0   3 2
No Yes Nematostella vectensis 1.0 Starlet sea anemone 3 2
No Yes Hydra vulgaris   1 1
No Yes Trichoplax adhaerens   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 28 22
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 23 15
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 7 5
No Yes Ascaris suum Victoria/Ghent Pig roundworm 1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 77 59
No Yes Homo sapiens (NCBI version) Human 57 36
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 15 12
No Yes Loa loa v3.3 (Request) Eye worm 3 3
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 1 1
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 2 2
No Yes Homo sapiens 69_37 Human 16 13
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 13 11
No Yes Gorilla gorilla 69_3.1 Western gorilla 15 12
No Yes Pongo abelii 69_2 Sumatran orangutan 14 11
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 14 11
No Yes Macaca mulatta 69_1 Rhesus monkey 14 11
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 15 12
No Yes Otolemur garnettii 69_3 Small-eared galago 15 12
No Yes Microcebus murinus 69_1 Gray mouse lemur 12 9
No Yes Rattus norvegicus 69_3.4 Norway rat 15 12
No Yes Mus musculus 69_38 House mouse 15 12
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 13 11
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 14 11
No Yes Cavia porcellus 69_3 Domestic guinea pig 15 12
No Yes Oryctolagus cuniculus 69_2 Rabbit 13 10
No Yes Ochotona princeps 69 American pika 12 11
No Yes Tupaia belangeri 69 Northern tree shrew 15 12
No Yes Sus scrofa 69_10.2 Pig 14 12
No Yes Bos taurus 69_3.1 Cattle 15 12
No Yes Vicugna pacos 69_1 Alpaca 10 9
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 14 11
No Yes Mustela putorius furo 69_1.0 Domestic ferret 15 12
No Yes Ailuropoda melanoleuca 69_1 Giant panda 15 12
No Yes Canis familiaris 69_3.1 Dog 17 14
No Yes Felis catus 69 Domestic cat 13 11
No Yes Equus caballus 69_2 Horse 16 13
No Yes Myotis lucifugus 69_2.0 Little brown bat 16 13
No Yes Pteropus vampyrus 69_1 Large flying fox 15 12
No Yes Sorex araneus 69_1 European shrew 6 6
No Yes Erinaceus europaeus 69 Western European hedgehog 10 8
No Yes Procavia capensis 69_1 Cape rock hyrax 13 11
No Yes Loxodonta africana 69_3 African savanna elephant 16 13
No Yes Echinops telfairi 69 Small Madagascar hedgehog 8 6
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 8 7
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 6 5
No Yes Macropus eugenii 69_1.0 Tammar wallaby 7 6
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 11 9
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 12 9
No Yes Ornithorhynchus anatinus 69_5 Platypus 10 9
No Yes Petromyzon marinus 69_7.0 Sea lamprey 7 5
No Yes Meleagris gallopavo 69_2 Turkey 10 8
No Yes Gallus gallus 69_2 Chicken 13 9
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 12 9
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 13 10
No Yes Anolis carolinensis 69_2.0 Green anole 14 11
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 13 10
No Yes Latimeria chalumnae 69_1 Coelacanth 15 12
No Yes Gadus morhua 69_1 Atlantic cod 15 13
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 17 14
No Yes Takifugu rubripes 69_4 Torafugu 21 16
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 16 13
No Yes Oryzias latipes 69_1 Japanese medaka 13 10
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 16 13
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 17 14
No Yes Danio rerio 69_9 Zebrafish 15 12
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 3 2
No Yes Ciona intestinalis 69 Vase tunicate 2 2
No Yes Drosophila melanogaster 69_5 Fruit fly 4 3
No Yes NCBI 2017_08 genome   11053 7826
No Yes STRING v9.0.5 (STRING)   422 332
No Yes Uniprot 2018_03 genome   4580 3379
No Yes PDB chains (SCOP 1.75) (PDB)   13 12
No Yes Protein Data Bank (all PDB sequenc)   42 40
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   222 222
No Yes TargetDB (Targets)   15 12
No Yes UniProt viral sequences (Viral)   1 1

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