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Calponin-homology domain, CH-domain superfamily domain assignments
in
Aquilegia coerulea v195

Assignment details

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Aquilegia coerulea v195 has 23 significant domains in 23 proteins.

     

Sequence ID   Evalue   Region   Family  
Aquca_002_00558.1|PACid:22052090   1.21e-40   8-135   Calponin-homology domain, CH-domain  
Aquca_002_00558.2|PACid:22052089   1.21e-40   8-135   Calponin-homology domain, CH-domain  
Aquca_003_00624.1|PACid:22050266   1.17e-22   43-168   Calponin-homology domain, CH-domain  
Aquca_003_00624.2|PACid:22050267   1.1e-22   43-168   Calponin-homology domain, CH-domain  
Aquca_003_00624.3|PACid:22050268   2.23e-21   11-116   Calponin-homology domain, CH-domain  
Aquca_004_00590.1|PACid:22030125   1.37e-20   32-181   Calponin-homology domain, CH-domain  
Aquca_005_00341.1|PACid:22023641   1.81e-21   60-193   Calponin-homology domain, CH-domain  
Aquca_005_00341.2|PACid:22023642   1.81e-21   55-188   Calponin-homology domain, CH-domain  
Aquca_005_00341.3|PACid:22023643   1.81e-21   15-147   Calponin-homology domain, CH-domain  
Aquca_013_00320.1|PACid:22059238   0.0000000000000906   29-130   Calponin-homology domain, CH-domain  
Aquca_013_00320.2|PACid:22059239   0.000000000000089   29-130   Calponin-homology domain, CH-domain  
Aquca_014_00749.1|PACid:22028276   1.83e-22   28-158   Calponin-homology domain, CH-domain  
Aquca_028_00172.1|PACid:22038573   6.48e-170   120-618   Calponin-homology domain, CH-domain  
Aquca_028_00172.2|PACid:22038574   6.48e-170   120-618   Calponin-homology domain, CH-domain  
Aquca_028_00172.3|PACid:22038575   5.58e-165   120-603   Calponin-homology domain, CH-domain  
Aquca_029_00108.1|PACid:22026296   3.14e-21   3-86   Calponin-homology domain, CH-domain  
Aquca_032_00119.1|PACid:22057364   2.09e-168   121-617   Calponin-homology domain, CH-domain  
Aquca_035_00137.1|PACid:22060943   1.24e-32   3-114   Calponin-homology domain, CH-domain  
Aquca_062_00033.1|PACid:22033311   4.19e-21   3-95   Calponin-homology domain, CH-domain  
Aquca_077_00024.1|PACid:22041523   2.97e-28   247-523   Calponin-homology domain, CH-domain  
Aquca_077_00024.2|PACid:22041524   3.01e-26   247-518   Calponin-homology domain, CH-domain  
Aquca_083_00061.1|PACid:22058227   1.17e-42   5-131   Calponin-homology domain, CH-domain  
Aquca_083_00061.2|PACid:22058228   1.17e-42   5-131   Calponin-homology domain, CH-domain  
 
Weak hits:
Aquca_037_00072.1|PACid:22040610   0.0778   673-722   Calponin-homology domain, CH-domain  
Aquca_097_00008.1|PACid:22049181   0.0667   11-63   Calponin-homology domain, CH-domain  

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Select to display   Genome       Domains   Proteins
No Yes ALL   133920 133920
No Yes Homo sapiens 76_38 Human 333 333
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 66 66
No Yes Gorilla gorilla 76_3.1 Western gorilla 103 103
No Yes Pongo abelii 76_2 Sumatran orangutan 77 77
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 71 71
No Yes Papio anubis 76 Olive baboon 84 84
No Yes Macaca mulatta 76_1 Rhesus monkey 152 151
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 183 183
No Yes Otolemur garnettii 76_3 Small-eared galago 73 73
No Yes Microcebus murinus 76_1 Gray mouse lemur 65 58
No Yes Rattus norvegicus 76_5.0 Norway rat 87 87
No Yes Mus musculus 76_38 House mouse 207 207
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 70 67
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 70 70
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 84 83
No Yes Cavia porcellus 76_3 Domestic guinea pig 73 73
No Yes Oryctolagus cuniculus 76_2 Rabbit 72 72
No Yes Ochotona princeps 76 American pika 64 61
No Yes Tupaia belangeri 76 Northern tree shrew 62 59
No Yes Sus scrofa 76_10.2 Pig 80 80
No Yes Bos taurus 76_3.1 Cattle 77 77
No Yes Ovis aries 76_3.1 Sheep 86 86
No Yes Vicugna pacos 76_1 Alpaca 38 36
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 68 67
No Yes Mustela putorius furo 76_1.0 Domestic ferret 75 75
No Yes Ailuropoda melanoleuca 76_1 Giant panda 93 93
No Yes Canis familiaris 76_3.1 Dog 113 112
No Yes Felis catus 76_6.2 Domestic cat 76 76
No Yes Equus caballus 76_2 Horse 113 113
No Yes Myotis lucifugus 76_2.0 Little brown bat 71 71
No Yes Pteropus vampyrus 76_1 Large flying fox 72 71
No Yes Sorex araneus 76_1 European shrew 48 45
No Yes Erinaceus europaeus 76 Western European hedgehog 60 54
No Yes Procavia capensis 76_1 Cape rock hyrax 71 68
No Yes Loxodonta africana 76_3 African savanna elephant 97 97
No Yes Echinops telfairi 76 Small Madagascar hedgehog 55 53
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 92 92
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 33 31
No Yes Macropus eugenii 76_1.0 Tammar wallaby 74 69
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 86 86
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 79 79
No Yes Ornithorhynchus anatinus 76_5 Platypus 78 77
No Yes Saccoglossus kowalevskii v3.0   85 81
No Yes Petromyzon marinus 76_7.0 Sea lamprey 44 44
No Yes Meleagris gallopavo 76_2 Turkey 73 73
No Yes Gallus gallus 76_4 Chicken 65 65
No Yes Anas platyrhynchos 76_1.0 Mallard 62 62
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 65 65
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 64 64
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 71 71
No Yes Anolis carolinensis 76_2.0 Green anole 63 63
No Yes Xenopus laevis African clawed frog 91 91
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 76 76
No Yes Latimeria chalumnae 76_1 Coelacanth 89 89
No Yes Lepisosteus oculatus 76 Spotted gar 103 103
No Yes Gadus morhua 76_1 Atlantic cod 90 89
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 118 118
No Yes Takifugu rubripes 76_4 Torafugu 330 330
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 111 111
No Yes Oryzias latipes 76_1 Japanese medaka 103 103
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 95 95
No Yes Poecilia formosa 76 Amazon molly 99 97
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 124 124
No Yes Astyanax mexicanus 76 Mexican tetra 103 103
No Yes Danio rerio 76_9 Zebrafish 186 186
No Yes Oikopleura dioica   27 27
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 51 51
No Yes Ciona intestinalis 76 Vase tunicate 28 28
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 53 48
No Yes Adineta vaga   93 93
No Yes Octopus bimaculoides 280   116 113
No Yes Crassostrea gigas 22 Pacific oyster 53 48
No Yes Lottia gigantea Owl limpet 50 48
No Yes Helobdella robusta   62 62
No Yes Capitella sp. I   47 45
No Yes Danaus plexippus OGS1.0 Monarch butterfly 31 29
No Yes Heliconius melpomene Postman butterfly 33 30
No Yes Bombyx mori Domestic silkworm 30 28
No Yes Nasonia vitripennis Jewel wasp 27 26
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 86 82
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 30 28
No Yes Linepithema humile v1.1 Argentine ant 38 36
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 41 39
No Yes Solenopsis invicta v.2.2.3 Red fire ant 33 32
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 33 31
No Yes Atta cephalotes v1.1   38 36
No Yes Camponotus floridanus v3.3 Florida carpenter ant 31 29
No Yes Lucilia cuprina Australian sheep blowfly 30 28
No Yes Drosophila grimshawi 1.3   35 32
No Yes Drosophila willistoni 1.3   35 33
No Yes Drosophila pseudoobscura 2.13   36 34
No Yes Drosophila persimilis 1.3   32 30
No Yes Drosophila suzukii   37 32
No Yes Drosophila yakuba 1.3   35 33
No Yes Drosophila simulans 1.3   28 26
No Yes Drosophila sechellia 1.3   32 30
No Yes Drosophila melanogaster 76_5 Fruit fly 133 129
No Yes Drosophila erecta 1.3   33 31
No Yes Drosophila ananassae 1.3   30 28
No Yes Drosophila virilis 1.2   34 32
No Yes Drosophila mojavensis 1.3   34 32
No Yes Megaselia scalaris 22   23 23
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 36 35
No Yes Culex pipiens quinquefasciatus Southern house mosquito 27 26
No Yes Anopheles darlingi 22 American malaria mosquito 25 22
No Yes Anopheles gambiae 49_3j African malaria mosquito 32 29
No Yes Tribolium castaneum 3.0 Red flour beetle 32 29
No Yes Pediculus humanus corporis (Early assembly) Human body louse 32 30
No Yes Acyrthosiphon pisum Pea aphid 33 31
No Yes Rhodnius prolixus 22   25 24
No Yes Daphnia pulex Common water flea 30 28
No Yes Strigamia maritima 22   37 36
No Yes Sarcoptes scabiei   26 24
No Yes Tetranychus urticae Two-spotted spider mite 24 21
No Yes Ixodes scapularis (Preliminary) Black-legged tick 25 25
No Yes Pristionchus pacificus   30 29
No Yes Meloidogyne incognita Southern root-knot nematode 21 21
No Yes Meloidogyne hapla   14 14
No Yes Onchocerca volvulus 22   28 28
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 38 38
No Yes Caenorhabditis japonica   30 29
No Yes Caenorhabditis brenneri   44 43
No Yes Caenorhabditis remanei   31 30
No Yes Caenorhabditis elegans 76_235 Roundworm 84 79
No Yes Caenorhabditis briggsae 2   31 30
No Yes Trichinella spiralis 22   21 21
No Yes Hymenolepis microstoma   38 37
No Yes Echinococcus multilocularis   38 38
No Yes Echinococcus granulosus   41 40
No Yes Taenia solium Pork tapeworm 45 43
No Yes Schistosoma mansoni   42 42
No Yes Mnemiopsis leidyi Sea walnut 53 47
No Yes Thelohanellus kitauei   12 11
No Yes Acropora digitifera v1.0   43 41
No Yes Nematostella vectensis 1.0 Starlet sea anemone 65 62
No Yes Hydra vulgaris   37 36
No Yes Amphimedon queenslandica   52 47
No Yes Trichoplax adhaerens   34 33
No Yes Proterospongia sp. ATCC 50818   36 32
No Yes Monosiga brevicollis   22 21
No Yes Sphaeroforma arctica JP610   29 24
No Yes Capsaspora owczarzaki ATCC 30864   25 23
No Yes Conidiobolus coronatus NRRL28638 v1.0   10 10
No Yes Mortierella verticillata NRRL 6337   13 13
No Yes Phycomyces blakesleeanus   17 17
No Yes Rhizopus oryzae RA 99-880   17 17
No Yes Mucor circinelloides   16 16
No Yes Rhizomucor miehei CAU432   20 20
No Yes Malassezia globosa CBS 7966   6 6
No Yes Sporisorium reilianum 22   5 5
No Yes Ustilago maydis   5 5
No Yes Mixia osmundae IAM 14324 v1.0   4 4
No Yes Cronartium quercuum f. sp. fusiforme G11 v1.0   5 5
No Yes Puccinia graminis f. sp. tritici CRL 75-36-700-3   5 5
No Yes Melampsora laricis-populina   5 5
No Yes Rhodotorula graminis WP1 v1.0   4 4
No Yes Sporobolomyces roseus IAM 13481   5 5
No Yes Microbotryum violaceum 22   5 5
No Yes Wallemia sebi v1.0   4 4
No Yes Sphaerobolus stellatus v1.0   8 8
No Yes Piloderma croceum F 1598 v1.0   5 5
No Yes Serpula lacrymans var. lacrymans S7.9   5 5
No Yes Coniophora puteana   6 6
No Yes Hydnomerulius pinastri v2.0   5 5
No Yes Paxillus rubicundulus Ve08.2h10 v1.0   6 6
No Yes Pisolithus microcarpus 441 v1.0   5 5
No Yes Pisolithus tinctorius Marx 270 v1.0   5 5
No Yes Scleroderma citrinum Foug A v1.0   5 5
No Yes Coprinopsis cinerea okayama7 130 v3   5 5
No Yes Pleurotus ostreatus Oyster mushroom 5 5
No Yes Amanita thiersii Skay4041 v1.0   5 5
No Yes Amanita muscaria Koide v1.0 Fly agaric 5 5
No Yes Galerina marginata v1.0   7 7
No Yes Hebeloma cylindrosporum h7 v2.0   5 5
No Yes Laccaria bicolor S238N-H82   8 8
No Yes Agaricus bisporus var. bisporus   5 5
No Yes Schizophyllum commune   4 4
No Yes Stereum hirsutum FP-91666 SS1 v1.0   4 4
No Yes Heterobasidion annosum   4 4
No Yes Gloeophyllum trabeumv1.0   6 6
No Yes Punctularia strigosozonata v1.0   5 5
No Yes Sebacina vermifera MAFF 305830 v1.0   9 9
No Yes Fomitiporia mediterranea v1.0   4 4
No Yes Tulasnella calospora AL13/4D v1.0   6 6
No Yes Postia placenta   6 6
No Yes Wolfiporia cocos MD-104 SS10 v1.0   5 5
No Yes Fomitopsis pinicolav1.0   6 6
No Yes Fomitopsis pinicola FP-58527 SS1 v3.0   6 6
No Yes Phanerochaete chrysosporium RP-78 2.1   5 5
No Yes Dichomitus squalens   6 6
No Yes Trametes versicolor v1.0   6 6
No Yes Tremella mesenterica Witches' butter 4 4
No Yes Daldinia eschscholzii EC12 v1.0   5 5
No Yes Apiospora montagnei NRRL 25634 v1.0   6 6
No Yes Magnaporthe poae ATCC 64411 22   4 4
No Yes Magnaporthe grisea 70-15   5 5
No Yes Podospora anserina   5 5
No Yes Sporotrichum thermophile ATCC 42464   5 5
No Yes Thielavia terrestris NRRL 8126   5 5
No Yes Chaetomium globosum CBS 148.51   4 4
No Yes Neurospora tetrasperma   5 5
No Yes Neurospora discreta FGSC 8579   5 5
No Yes Neurospora crassa OR74A   5 5
No Yes Cryphonectria parasitica Chestnut blight fungus 5 5
No Yes Verticillium albo-atrum VaMs.102   5 5
No Yes Verticillium dahliae VdLs.17   5 5
No Yes Acremonium alcalophilumv 1.0   5 5
No Yes Glomerella graminicola 22   5 5
No Yes Fusarium graminearum   5 5
No Yes Nectria haematococca mpVI   5 5
No Yes Fusarium oxysporum f. sp. lycopersici 4286   5 5
No Yes Fusarium verticillioides 7600   5 5
No Yes Trichoderma asperellum CBS 433.97 v1.0   5 5
No Yes Trichoderma atroviride   5 5
No Yes Trichoderma citrinoviride v1.0   5 5
No Yes Trichoderma reesei 1.2   5 5
No Yes Trichoderma virens Gv29-8   5 5
No Yes Trichoderma longibrachiatum ATCC 18648 v1.0   4 4
No Yes Trichoderma harzianum CBS 226.95 v1.0   5 5
No Yes Amorphotheca resinae v1.0 Creosote fungus 5 5
No Yes Botrytis cinerea B05.10   5 5
No Yes Sclerotinia sclerotiorum   5 5
No Yes Blumeria graminis 22   7 6
No Yes Didymella exigua CBS 183.55 v1.0   7 7
No Yes Leptosphaeria maculans 22   6 6
No Yes Setosphaeria turcica v1.0   6 6
No Yes Cochliobolus miyabeanus ATCC 44560 v1.0   6 6
No Yes Cochliobolus victoriae FI3 v1.0   6 6
No Yes Cochliobolus carbonum 26-R-13 v1.0   6 6
No Yes Cochliobolus heterostrophus Southern corn leaf blight pathogen 6 6
No Yes Alternaria brassicicola   6 6
No Yes Cochliobolus lunatus m118 v2.0   6 6
No Yes Pyrenophora teres f. teres 22   7 7
No Yes Pyrenophora tritici-repentis   6 6
No Yes Stagonospora nodorum   6 6
No Yes Mycosphaerella graminicola IPO323   7 7
No Yes Zasmidium cellare ATCC 36951 v1.0   7 7
No Yes Dothistroma septosporum   6 6
No Yes Septoria musiva v1.0   6 6
No Yes Mycosphaerella fijiensis CIRAD86   7 7
No Yes Aureobasidium pullulans var. subglaciale EXF-2481 v1.0   6 6
No Yes Paracoccidioides brasiliensis Pb18   6 6
No Yes Coccidioides posadasii RMSCC 3488   8 8
No Yes Coccidioides immitis RS   8 8
No Yes Ajellomyces dermatitidis SLH14081   6 6
No Yes Histoplasma capsulatum class NAmI strain WU24   6 6
No Yes Microsporum canis CBS 113480   6 6
No Yes Trichophyton equinum CBS 127.97   6 6
No Yes Trichophyton verrucosum HKI 0517   6 6
No Yes Arthroderma benhamiae CBS 112371   6 6
No Yes Trichophyton tonsurans CBS 112818   6 6
No Yes Trichophyton rubrum CBS 118892   6 6
No Yes Uncinocarpus reesii 1704   6 6
No Yes Aspergillus zonatus v1.0   6 6
No Yes Penicillium chrysogenum Wisconsin 54-1255   5 5
No Yes Penicillium chrysogenum v1.0   5 5
No Yes Aspergillus acidus v1.0   6 6
No Yes Aspergillus fumigatus Af293   6 6
No Yes Aspergillus brasiliensis v1.0   6 6
No Yes Aspergillus nidulans FGSC A4   6 6
No Yes Aspergillus sydowii v1.0   6 6
No Yes Aspergillus versicolor v1.0   6 6
No Yes Aspergillus glaucus   6 6
No Yes Aspergillus carbonarius ITEM 5010   6 6
No Yes Neosartorya fischeri NRRL 181   6 6
No Yes Aspergillus terreus NIH2624   6 6
No Yes Aspergillus tubingensis v1.0   6 6
No Yes Aspergillus wentii v1.0   6 6
No Yes Aspergillus oryzae RIB40   6 6
No Yes Aspergillus niger 22   5 5
No Yes Aspergillus niger ATCC 1015   4 4
No Yes Aspergillus flavus NRRL3357   6 6
No Yes Aspergillus clavatus NRRL 1   6 6
No Yes Penicillium marneffei ATCC 18224   6 6
No Yes Tuber melanosporum Mel28 22   6 6
No Yes Tuber melanosporum Vittad Perigord truffle 6 6
No Yes Hansenula polymorpha v2.0   4 4
No Yes Dekkera bruxellensis CBS 2499 v2.0   5 5
No Yes Pichia membranifaciensv1.0   6 6
No Yes Candida tanzawaensis NRRL Y-17324 v1.0   5 5
No Yes Candida dubliniensis CD36   5 5
No Yes Candida tropicalis MYA-3404   5 5
No Yes Candida parapsilosis   4 4
No Yes Candida albicans SC5314   5 5
No Yes Lodderomyces elongisporus NRRL YB-4239   4 4
No Yes Babjeviella inositovora NRRL Y-12698 v1.0   4 4
No Yes Pichia stipitis CBS 6054   5 5
No Yes Candida guilliermondii ATCC 6260   4 4
No Yes Hyphopichia burtonii NRRL Y-1933 v1.0   5 5
No Yes Debaromyces hansenii   5 5
No Yes Wickerhamomyces anomalus   3 3
No Yes Pichia pastoris GS115   5 5
No Yes Hanseniaspora valbyensis NRRL Y-1626 v1.1   2 2
No Yes Yarrowia lipolytica CLIB122   5 5
No Yes Candida lusitaniae ATCC 42720   5 5
No Yes Metschnikowia bicuspidata NRRL YB-4993 v1.0   5 5
No Yes Vanderwaltozyma polyspora DSM 70294   4 4
No Yes Candida glabrata CBS138   4 4
No Yes Kluyveromyces thermotolerans CBS 6340   4 4
No Yes Lachancea kluyveri   4 4
No Yes Kluyveromyces waltii   4 4
No Yes Ashbya gossypii ATCC 10895   4 4
No Yes Zygosaccharomyces rouxii   4 4
No Yes Saccharomyces mikatae MIT   3 3
No Yes Saccharomyces paradoxus MIT   4 4
No Yes Saccharomyces cerevisiae 76 Baker's yeast 4 4
No Yes Saccharomyces bayanus MIT   4 4
No Yes Kluyveromyces lactis   4 4
No Yes Schizosaccharomyces cryophilus OY26 22   6 6
No Yes Schizosaccharomyces octosporus yFS286   6 6
No Yes Schizosaccharomyces japonicus yFS275   5 5
No Yes Schizosaccharomyces pombe Fission yeast 6 6
No Yes Catenaria anguillulae PL171 v1.0   10 10
No Yes Allomyces macrogynus ATCC 38327   23 23
No Yes Spizellomyces punctatus DAOM BR117   17 17
No Yes Dictyostelium discoideum   36 35
No Yes Dictyostelium purpureum   36 35
No Yes Entamoeba dispar 1.2   34 34
No Yes Entamoeba invadens 1.2   42 42
No Yes Entamoeba histolytica 1   35 35
No Yes Selaginella moellendorffii   33 33
No Yes Pinus taeda Loblolly pine 17 17
No Yes Picea abies Norway spruce 14 14
No Yes Eucalyptus grandis v201 Rose gum 17 17
No Yes Theobroma cacao B97-61/B2 v1 Cacao 14 14
No Yes Gossypium raimondii v221   53 53
No Yes Citrus clementina v165   17 17
No Yes Citrus sinensis v154 Sweet orange 20 20
No Yes Thellungiella halophila v173   18 18
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 22 22
No Yes Capsella rubella v183   17 17
No Yes Arabidopsis lyrata Lyrate rockcress 16 16
No Yes Arabidopsis thaliana 10 Thale cress 19 19
No Yes Carica papaya Papaya 10 10
No Yes Medicago truncatula Barrel medic 25 25
No Yes Phaseolus vulgaris v186 French bean 20 20
No Yes Glycine max v109 Soybean 31 31
No Yes Cucumis sativus v122 Cucumber 23 23
No Yes Fragaria vesca Wild strawberry 12 12
No Yes Malus domestica v196 Apple 31 27
No Yes Prunus persica v139 Peach 12 12
No Yes Linum usitatissimum v200 Flax 27 27
No Yes Manihot esculenta v147 Cassava 18 18
No Yes Populus trichocarpa v156 Black cottonwood 22 22
No Yes Vitis vinifera Wine grape 15 15
No Yes Mimulus guttatus v140 Spotted monkey flower 14 14
No Yes Solanum lycopersicum v.2.3 Tomato 16 16
No Yes Solanum tuberosum Potato 26 26
No Yes Actinidia chinensis Hongyang   25 25
No Yes Aquilegia coerulea v195   23 23
No Yes Triticum urartu 22   11 11
No Yes Triticum aestivum 22 Bread wheat 53 53
No Yes Aegilops tauschii 22   21 20
No Yes Brachypodium distachyon Stiff brome 18 18
No Yes Oryza barthii 22 African wild rice 25 25
No Yes Oryza meridionalis 22   24 24
No Yes Oryza glumaepatula 22   29 29
No Yes Oryza glaberrima African rice 15 15
No Yes Oryza punctata 22   29 29
No Yes Oryza nivara 22   37 37
No Yes Oryza brachyantha 22 Malo sina 16 16
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 16 16
No Yes Oryza sativa v193 Rice 16 16
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 25 24
No Yes Panicum virgatum v202 Switchgrass 32 32
No Yes Setaria italica v164 Foxtail millet 15 15
No Yes Zea mays subsp. mays Maize 27 27
No Yes Zea mays v181 Maize 28 28
No Yes Sorghum bicolor Sorghum 14 14
No Yes Musa balbisiana Balbis banana 21 19
No Yes Musa acuminata 22 Wild Malaysian banana 19 19
No Yes Amborella trichopoda 22   10 10
No Yes Physcomitrella patens   15 15
No Yes Coccomyxa subellipsoidea sp. C-169 v2   5 5
No Yes Asterochloris sp. Cgr/DA1pho v1.0   3 3
No Yes Chlorella variabilis sp. NC64A   3 3
No Yes Chlorella vulgaris   5 5
No Yes Volvox carteri f. nagariensis   5 5
No Yes Volvox carteri v199   8 7
No Yes Chlamydomonas reinhardtii 4.0   5 5
No Yes Ostreococcus sp. RCC809   4 4
No Yes Ostreococcus lucimarinus CCE9901   3 3
No Yes Ostreococcus tauri   3 3
No Yes Bathycoccus prasinos   2 2
No Yes Micromonas sp. RCC299   7 7
No Yes Micromonas pusilla CCMP1545 v3.0   5 5
No Yes Cyanidioschyzon merolae strain 10D 22   2 2
No Yes Cyanidioschyzon merolae   2 2
No Yes Porphyridium purpureum 02_2012   1 1
No Yes Thecamonas trahens ATCC 50062   48 46
No Yes Bigelowiella natans CCMP2755 22   27 25
No Yes Giardia lamblia 2.3   4 4
No Yes Cyanophora paradoxa   17 16
No Yes Leishmania mexicana 2.4   6 6
No Yes Leishmania major strain Friedlin   6 6
No Yes Leishmania infantum JPCM5 2.4   6 6
No Yes Leishmania braziliensis MHOM/BR/75/M2904 2.4   6 6
No Yes Trypanosoma vivax   5 5
No Yes Trypanosoma cruzi strain CL Brener   7 7
No Yes Trypanosoma congolense 2.4   9 8
No Yes Trypanosoma brucei gambiense v4.1   10 9
No Yes Trypanosoma brucei TREU927 v4.1   10 9
No Yes Ectocarpus siliculosus   18 15
No Yes Aureococcus anophagefferens   14 14
No Yes Albugo laibachii 22   16 14
No Yes Pythium iwayamai DAOM BR242034 22   18 17
No Yes Pythium arrhenomanes ATCC 12531 22   14 13
No Yes Pythium ultimum v1.7-2   15 14
No Yes Pythium aphanidermatum DAOM BR444 22   16 15
No Yes Pythium irregulare DAOM BR486 22   17 16
No Yes Pythium vexans DAOM BR484 22   14 13
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 14 13
No Yes Phytophthora sojae 1.1   14 14
No Yes Phytophthora infestans T30-4   15 15
No Yes Phytophthora capsici   12 11
No Yes Hyaloperonospora arabidopsidis 22   10 9
No Yes Phaeodactylum tricornutumCCAP 1055/1   2 2
No Yes Fragilariopsis cylindrus   2 2
No Yes Thalassiosira pseudonana CCMP1335   2 2
No Yes Perkinsus marinus ATCC 50983   6 6
No Yes Paramecium tetraurelia   44 39
No Yes Tetrahymena thermophila SB210 1   23 18
No Yes Ichthyophthirius multifiliis strain G5   20 17
No Yes Cryptosporidium hominis   3 3
No Yes Cryptosporidium muris   3 3
No Yes Cryptosporidium parvum Iowa II   3 3
No Yes Neospora caninum   2 2
No Yes Toxoplasma gondii VEG   2 2
No Yes Toxoplasma gondii ME49   2 2
No Yes Toxoplasma gondii GT1   2 2
No Yes Babesia bovis T2Bo   2 2
No Yes Theileria parva   1 1
No Yes Theileria annulata   1 1
No Yes Plasmodium falciparum 3D7   4 4
No Yes Plasmodium vivax SaI-1 7.0   5 5
No Yes Plasmodium knowlesi strain H   3 3
No Yes Plasmodium yoelii ssp. yoelii 1   3 3
No Yes Plasmodium chabaudi   5 5
No Yes Plasmodium berghei ANKA   5 5
No Yes Symbiodinium minutum clade B1 v1.2   15 15
No Yes Naegleria gruberi   27 26
No Yes Trichomonas vaginalis   25 24
No Yes Guillardia theta CCMP2712 v1.0   23 21
No Yes Emiliania huxleyi CCMP1516   40 40
No Yes Methanococcus vannielii SB   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 112 112
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 96 94
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 41 38
No Yes Ascaris suum Victoria/Ghent Pig roundworm 35 34
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 58 53
No Yes Cryptococcus neoformans var. grubii H99   4 4
No Yes Cryptococcus neoformans B-3501A   4 4
No Yes Cryptococcus neoformans JEC21   4 4
No Yes Paracoccidioides brasiliensis Pb01   6 6
No Yes Paracoccidioides brasiliensis Pb03   6 6
No Yes Coccidioides posadasii str. Silveira   6 6
No Yes Coccidioides immitis RMSCC 3703   5 5
No Yes Coccidioides immitis RMSCC 2394   6 6
No Yes Coccidioides immitis H538.4   7 7
No Yes Ajellomyces dermatitidis ER-3   6 6
No Yes Histoplasma capsulatum H143   6 6
No Yes Histoplasma capsulatum H88   6 6
No Yes Histoplasma capsulatum G186AR   6 6
No Yes Aspergillus fumigatus A1163   6 6
No Yes Candida albicans WO-1   5 5
No Yes Saccharomyces cerevisiae UC5   3 3
No Yes Saccharomyces cerevisiae PW5   3 3
No Yes Saccharomyces cerevisiae FL100   2 2
No Yes Saccharomyces cerevisiae CLIB382   1 1
No Yes Saccharomyces cerevisiae CLIB324   2 2
No Yes Saccharomyces cerevisiae CBS7960   2 2
No Yes Saccharomyces cerevisiae YJM269   3 3
No Yes Saccharomyces cerevisiae T7   4 4
No Yes Saccharomyces cerevisiae FostersB   3 3
No Yes Saccharomyces cerevisiae FostersO   3 3
No Yes Saccharomyces cerevisiae VL3   4 4
No Yes Saccharomyces cerevisiae Vin13   3 3
No Yes Saccharomyces cerevisiae LalvinQA23   2 2
No Yes Saccharomyces cerevisiae AWRI796   2 2
No Yes Saccharomyces cerevisiae Sigma1278b   4 4
No Yes Saccharomyces cerevisiae W303   4 4
No Yes Saccharomyces cerevisiae JAY291   4 4
No Yes Saccharomyces cerevisiae AWRI1631   3 3
No Yes Saccharomyces cerevisiae YPS163   2 2
No Yes Saccharomyces cerevisiae M22   2 2
No Yes Saccharomyces cerevisiae T73   2 2
No Yes Saccharomyces cerevisiae CLIB215   2 2
No Yes Saccharomyces cerevisiae Y10   1 1
No Yes Saccharomyces cerevisiae YJM789   4 4
No Yes Saccharomyces cerevisiae YJM789   4 4
No Yes Saccharomyces cerevisiae RM11-1a   3 3
No Yes Saccharomyces cerevisiae RM11-1a   4 4
No Yes Saccharomyces cerevisiae SGD (SGD) Baker's yeast 4 4
No Yes Schizosaccharomyces pombe 972h-   6 6
No Yes Batrachochytrium dendrobatidis JEL423   10 10
No Yes Batrachochytrium dendrobatidis JAM81   10 10
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 12 12
No Yes Hordeum vulgare 22 Domesticated barley 38 38
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 18 18
No Yes Trypanosoma brucei Lister 427 v4.1   10 9
No Yes Neospora caninum Nc-Liverpool 6.2   2 2
No Yes Plasmodium falciparum HB3   4 4
No Yes Plasmodium falciparum Dd2   2 2
No Yes Staphylococcus pasteuri SP1   1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 383 383
No Yes Homo sapiens (NCBI version) Human 138 138
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 73 73
No Yes Heliconius numata (Incomplete)   19 19
No Yes Loa loa v3.3 (Request) Eye worm 31 31
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 33 31
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 21 21
No Yes Moniliophthora perniciosa FA553 (Genome survey)   4 4
No Yes Encephalitozoon intestinalis (endoparasite)   4 4
No Yes Encephalitozoon cuniculi (endoparasite)   4 4
No Yes Picea sitchensis (Incomplete) Sitka spruce 1 1
No Yes Lotus japonicus (Early assembly)   18 18
No Yes Malus x domestica (Duplicate) Apple 31 27
No Yes Ricinus communis (Early assembly) Castor bean 12 12
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   29 28
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 16 16
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 16 16
No Yes Phoenix dactylifera (Early draft) Date palm 18 18
No Yes Homo sapiens 69_37 Human 77 77
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 65 65
No Yes Gorilla gorilla 69_3.1 Western gorilla 77 77
No Yes Pongo abelii 69_2 Sumatran orangutan 72 72
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 64 64
No Yes Macaca mulatta 69_1 Rhesus monkey 81 80
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 81 81
No Yes Otolemur garnettii 69_3 Small-eared galago 70 70
No Yes Microcebus murinus 69_1 Gray mouse lemur 65 58
No Yes Rattus norvegicus 69_3.4 Norway rat 74 74
No Yes Mus musculus 69_38 House mouse 76 76
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 70 67
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 63 63
No Yes Cavia porcellus 69_3 Domestic guinea pig 71 71
No Yes Oryctolagus cuniculus 69_2 Rabbit 68 68
No Yes Ochotona princeps 69 American pika 64 61
No Yes Tupaia belangeri 69 Northern tree shrew 62 59
No Yes Sus scrofa 69_10.2 Pig 67 67
No Yes Bos taurus 69_3.1 Cattle 71 71
No Yes Vicugna pacos 69_1 Alpaca 38 36
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 68 67
No Yes Mustela putorius furo 69_1.0 Domestic ferret 75 75
No Yes Ailuropoda melanoleuca 69_1 Giant panda 76 76
No Yes Canis familiaris 69_3.1 Dog 79 78
No Yes Felis catus 69 Domestic cat 57 56
No Yes Equus caballus 69_2 Horse 69 69
No Yes Myotis lucifugus 69_2.0 Little brown bat 66 66
No Yes Pteropus vampyrus 69_1 Large flying fox 72 71
No Yes Sorex araneus 69_1 European shrew 48 45
No Yes Erinaceus europaeus 69 Western European hedgehog 60 54
No Yes Procavia capensis 69_1 Cape rock hyrax 71 68
No Yes Loxodonta africana 69_3 African savanna elephant 66 66
No Yes Echinops telfairi 69 Small Madagascar hedgehog 55 53
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 59 52
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 33 31
No Yes Macropus eugenii 69_1.0 Tammar wallaby 74 69
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 67 67
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 71 71
No Yes Ornithorhynchus anatinus 69_5 Platypus 69 68
No Yes Petromyzon marinus 69_7.0 Sea lamprey 37 37
No Yes Meleagris gallopavo 69_2 Turkey 56 56
No Yes Gallus gallus 69_2 Chicken 55 55
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 59 59
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 56 56
No Yes Anolis carolinensis 69_2.0 Green anole 64 64
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 65 65
No Yes Latimeria chalumnae 69_1 Coelacanth 68 68
No Yes Gadus morhua 69_1 Atlantic cod 88 87
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 91 91
No Yes Takifugu rubripes 69_4 Torafugu 89 89
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 88 88
No Yes Oryzias latipes 69_1 Japanese medaka 81 81
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 95 95
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 92 92
No Yes Danio rerio 69_9 Zebrafish 106 106
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 22 22
No Yes Ciona intestinalis 69 Vase tunicate 25 25
No Yes Drosophila melanogaster 69_5 Fruit fly 30 29
No Yes Caenorhabditis elegans 69_215 Roundworm 33 29
No Yes Saccharomyces cerevisiae 69_4 Baker's yeast 4 4
No Yes Arabidopsis thaliana 10 Thale cress 16 16
No Yes 1_Upper_euphotic (meta-genome)   1 1
No Yes 6_Upper_euphotic (meta-genome)   1 1
No Yes Air microbial communities Singapore indoor air filters 1 (meta-genome)   1 1
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   1 1
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)   2 2
No Yes Dump bottom (Dump bottom) (meta-genome)   2 2
No Yes Dump top (Dump top) (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome)   1 1
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   1 1
No Yes NCBI 2017_08 genome   63155 62699
No Yes Protozoadb 2010_08 (Protozoadb)   303 300
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   3 3
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   2 2
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   3256 3191
No Yes Uniprot 2018_03 genome   39216 38606
No Yes Global Ocean Sampling Expedition (GOS)   54 54
No Yes PDB chains (SCOP 1.75) (PDB)   21 21
No Yes Protein Data Bank (all PDB sequenc)   170 170
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   510 510
No Yes TargetDB (Targets)   142 141

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