SUPERFAMILY 1.75 HMM library and genome assignments server

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C-terminal domain of B transposition protein superfamily domain assignments
in
Pseudomonas protegens CHA0

Network of domain occurrence in all genomes



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View all assignments containing a C-terminal domain of B transposition protein domain in each group of genomes.

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Select to display   Genome       Domains   Proteins
No Yes ALL   2122 2122
No Yes Desulfatibacillum alkenivorans AK-01   1 1
No Yes Bordetella petrii DSM 12804   1 1
No Yes Rhodospirillum photometricum DSM 122   1 1
No Yes Xanthobacter autotrophicus Py2   1 1
No Yes Agrobacterium vitis S4   2 2
No Yes Bartonella tribocorum CIP 105476   4 4
No Yes Gallibacterium anatis UMN179   1 1
No Yes Haemophilus ducreyi 35000HP   1 1
No Yes Vibrio cholerae O395   2 2
No Yes Shewanella oneidensis MR-1   1 1
No Yes Rhodanobacter denitrificans   1 1
No Yes Thioalkalivibrio sulfidophilus HL-EbGr7   1 1
No Yes Xenorhabdus nematophila ATCC 19061   1 1
No Yes Escherichia blattae DSM 4481   1 1
No Yes Citrobacter rodentium ICC168   1 1
No Yes Bibersteinia trehalosi USDA-ARS-USMARC-192   1 1
No Yes Aggregatibacter actinomycetemcomitans D11S-1   1 1
No Yes Mannheimia haemolytica USMARC_2286   1 1
No Yes Mannheimia haemolytica M42548   1 1
No Yes Mannheimia haemolytica D174   2 2
No Yes Mannheimia haemolytica D153   1 1
No Yes Mannheimia haemolytica USDA-ARS-USMARC-183   1 1
No Yes Haemophilus influenzae F3031   1 1
No Yes Haemophilus influenzae Rd KW20   1 1
No Yes Vibrio cholerae O395   2 2
No Yes Shewanella putrefaciens 200   2 2
No Yes Shigella sonnei 53G   1 1
No Yes Escherichia coli LY180   1 1
No Yes Escherichia coli KO11FL   1 1
No Yes Escherichia coli KO11FL   1 1
No Yes Escherichia coli W   1 1
No Yes Escherichia coli W   1 1
No Yes Escherichia coli SE11   1 1
No Yes Escherichia coli O157:H7 str. Sakai   1 1
No Yes Combined (meta-genome)   1 1
No Yes Dump bottom (Dump bottom) (meta-genome)   6 6
No Yes Dump top (Dump top) (meta-genome)   2 2
No Yes Endophytic microbiome from Rice (meta-genome)   1 1
No Yes NCBI 2017_08 genome   1678 1678
No Yes STRING v9.0.5 (STRING)   18 18
No Yes Uniprot 2018_03 genome   343 343
No Yes Global Ocean Sampling Expedition (GOS)   1 1
No Yes NCBI viral sequences (Viral)   3 3
No Yes PDB chains (SCOP 1.75) (PDB)   1 1
No Yes Protein Data Bank (all PDB sequenc)   1 1
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   3 3
No Yes TargetDB (Targets)   2 2
No Yes UniProt viral sequences (Viral)   2 2

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