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SAM/Pointed domain superfamily domain assignments
in
Coniophora puteana

Assignment details

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Coniophora puteana has 4 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
jgi|Conpu1|104262|estExt_Genewise1.C_6_t10471   0.000000000013   545-610   SAM (sterile alpha motif) domain  
jgi|Conpu1|127146|estExt_Genewise1Plus.C_9_t20256   2.69e-17   10-79   SAM (sterile alpha motif) domain  
jgi|Conpu1|139675|estExt_fgenesh1_pm.C_140143   5.97e-16   448-519   SAM (sterile alpha motif) domain  
jgi|Conpu1|87650|fgenesh1_pm.2_#_421   1.43e-17   82-150   SAM (sterile alpha motif) domain  
 
Weak hits:
jgi|Conpu1|150647|gm1.2638_g   0.0011   153-202   Pointed domain  
jgi|Conpu1|75426|fgenesh1_pg.11_#_75   0.0471   1235-1263   Pointed domain  

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Select to display   Genome       Domains   Proteins
No Yes ALL   206502 206502
No Yes Homo sapiens 76_38 Human 483 400
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 130 112
No Yes Gorilla gorilla 76_3.1 Western gorilla 188 156
No Yes Pongo abelii 76_2 Sumatran orangutan 132 112
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 145 121
No Yes Papio anubis 76 Olive baboon 144 124
No Yes Macaca mulatta 76_1 Rhesus monkey 212 180
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 280 235
No Yes Otolemur garnettii 76_3 Small-eared galago 135 115
No Yes Microcebus murinus 76_1 Gray mouse lemur 98 87
No Yes Rattus norvegicus 76_5.0 Norway rat 159 135
No Yes Mus musculus 76_38 House mouse 312 260
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 106 92
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 120 102
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 137 117
No Yes Cavia porcellus 76_3 Domestic guinea pig 159 120
No Yes Oryctolagus cuniculus 76_2 Rabbit 120 106
No Yes Ochotona princeps 76 American pika 105 92
No Yes Tupaia belangeri 76 Northern tree shrew 93 81
No Yes Sus scrofa 76_10.2 Pig 145 123
No Yes Bos taurus 76_3.1 Cattle 139 120
No Yes Ovis aries 76_3.1 Sheep 134 114
No Yes Vicugna pacos 76_1 Alpaca 65 56
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 124 107
No Yes Mustela putorius furo 76_1.0 Domestic ferret 132 114
No Yes Ailuropoda melanoleuca 76_1 Giant panda 150 125
No Yes Canis familiaris 76_3.1 Dog 178 146
No Yes Felis catus 76_6.2 Domestic cat 131 112
No Yes Equus caballus 76_2 Horse 151 127
No Yes Myotis lucifugus 76_2.0 Little brown bat 126 112
No Yes Pteropus vampyrus 76_1 Large flying fox 119 104
No Yes Sorex araneus 76_1 European shrew 74 69
No Yes Erinaceus europaeus 76 Western European hedgehog 82 72
No Yes Procavia capensis 76_1 Cape rock hyrax 101 87
No Yes Loxodonta africana 76_3 African savanna elephant 200 164
No Yes Echinops telfairi 76 Small Madagascar hedgehog 94 84
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 165 136
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 59 53
No Yes Macropus eugenii 76_1.0 Tammar wallaby 108 96
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 150 129
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 137 117
No Yes Ornithorhynchus anatinus 76_5 Platypus 117 100
No Yes Saccoglossus kowalevskii v3.0   194 165
No Yes Petromyzon marinus 76_7.0 Sea lamprey 68 51
No Yes Meleagris gallopavo 76_2 Turkey 129 112
No Yes Gallus gallus 76_4 Chicken 130 112
No Yes Anas platyrhynchos 76_1.0 Mallard 129 109
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 107 95
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 122 107
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 144 125
No Yes Anolis carolinensis 76_2.0 Green anole 138 121
No Yes Xenopus laevis African clawed frog 182 163
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 136 115
No Yes Latimeria chalumnae 76_1 Coelacanth 170 142
No Yes Lepisosteus oculatus 76 Spotted gar 196 167
No Yes Gadus morhua 76_1 Atlantic cod 151 126
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 211 170
No Yes Takifugu rubripes 76_4 Torafugu 659 514
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 215 181
No Yes Oryzias latipes 76_1 Japanese medaka 172 142
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 162 136
No Yes Poecilia formosa 76 Amazon molly 174 143
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 244 200
No Yes Astyanax mexicanus 76 Mexican tetra 174 148
No Yes Danio rerio 76_9 Zebrafish 292 249
No Yes Oikopleura dioica   26 22
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 100 74
No Yes Ciona intestinalis 76 Vase tunicate 59 53
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 92 80
No Yes Adineta vaga   120 99
No Yes Octopus bimaculoides 280   132 92
No Yes Crassostrea gigas 22 Pacific oyster 93 79
No Yes Lottia gigantea Owl limpet 66 57
No Yes Helobdella robusta   56 44
No Yes Capitella sp. I   61 54
No Yes Danaus plexippus OGS1.0 Monarch butterfly 44 37
No Yes Heliconius melpomene Postman butterfly 35 31
No Yes Bombyx mori Domestic silkworm 38 33
No Yes Nasonia vitripennis Jewel wasp 33 25
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 71 54
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 50 41
No Yes Linepithema humile v1.1 Argentine ant 53 45
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 47 41
No Yes Solenopsis invicta v.2.2.3 Red fire ant 43 38
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 51 43
No Yes Atta cephalotes v1.1   48 43
No Yes Camponotus floridanus v3.3 Florida carpenter ant 45 37
No Yes Lucilia cuprina Australian sheep blowfly 44 36
No Yes Drosophila grimshawi 1.3   53 46
No Yes Drosophila willistoni 1.3   49 42
No Yes Drosophila pseudoobscura 2.13   52 45
No Yes Drosophila persimilis 1.3   51 44
No Yes Drosophila suzukii   48 40
No Yes Drosophila yakuba 1.3   50 43
No Yes Drosophila simulans 1.3   42 35
No Yes Drosophila sechellia 1.3   50 43
No Yes Drosophila melanogaster 76_5 Fruit fly 154 118
No Yes Drosophila erecta 1.3   50 43
No Yes Drosophila ananassae 1.3   49 43
No Yes Drosophila virilis 1.2   50 43
No Yes Drosophila mojavensis 1.3   51 44
No Yes Megaselia scalaris 22   18 14
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 55 42
No Yes Culex pipiens quinquefasciatus Southern house mosquito 43 36
No Yes Anopheles darlingi 22 American malaria mosquito 25 24
No Yes Anopheles gambiae 49_3j African malaria mosquito 50 43
No Yes Tribolium castaneum 3.0 Red flour beetle 47 39
No Yes Pediculus humanus corporis (Early assembly) Human body louse 46 38
No Yes Acyrthosiphon pisum Pea aphid 45 36
No Yes Rhodnius prolixus 22   46 41
No Yes Daphnia pulex Common water flea 58 49
No Yes Strigamia maritima 22   60 49
No Yes Sarcoptes scabiei   28 21
No Yes Tetranychus urticae Two-spotted spider mite 45 40
No Yes Ixodes scapularis (Preliminary) Black-legged tick 41 34
No Yes Pristionchus pacificus   25 21
No Yes Meloidogyne incognita Southern root-knot nematode 32 28
No Yes Meloidogyne hapla   14 12
No Yes Onchocerca volvulus 22   27 22
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 46 34
No Yes Caenorhabditis japonica   22 19
No Yes Caenorhabditis brenneri   31 26
No Yes Caenorhabditis remanei   39 35
No Yes Caenorhabditis elegans 76_235 Roundworm 87 73
No Yes Caenorhabditis briggsae 2   36 30
No Yes Trichinella spiralis 22   28 23
No Yes Hymenolepis microstoma   30 23
No Yes Echinococcus multilocularis   27 22
No Yes Echinococcus granulosus   27 22
No Yes Taenia solium Pork tapeworm 28 24
No Yes Schistosoma mansoni   33 28
No Yes Mnemiopsis leidyi Sea walnut 29 25
No Yes Thelohanellus kitauei   7 4
No Yes Acropora digitifera v1.0   74 64
No Yes Nematostella vectensis 1.0 Starlet sea anemone 61 53
No Yes Hydra vulgaris   56 47
No Yes Amphimedon queenslandica   69 62
No Yes Trichoplax adhaerens   32 26
No Yes Proterospongia sp. ATCC 50818   67 53
No Yes Monosiga brevicollis   56 42
No Yes Sphaeroforma arctica JP610   13 13
No Yes Capsaspora owczarzaki ATCC 30864   33 30
No Yes Conidiobolus coronatus NRRL28638 v1.0   11 11
No Yes Mortierella verticillata NRRL 6337   12 12
No Yes Phycomyces blakesleeanus   10 10
No Yes Rhizopus oryzae RA 99-880   14 14
No Yes Mucor circinelloides   12 12
No Yes Rhizomucor miehei CAU432   12 12
No Yes Malassezia globosa CBS 7966   6 6
No Yes Sporisorium reilianum 22   4 4
No Yes Ustilago maydis   4 4
No Yes Mixia osmundae IAM 14324 v1.0   6 6
No Yes Cronartium quercuum f. sp. fusiforme G11 v1.0   6 6
No Yes Puccinia graminis f. sp. tritici CRL 75-36-700-3   4 4
No Yes Melampsora laricis-populina   5 5
No Yes Rhodotorula graminis WP1 v1.0   2 2
No Yes Sporobolomyces roseus IAM 13481   2 2
No Yes Microbotryum violaceum 22   6 6
No Yes Wallemia sebi v1.0   3 3
No Yes Sphaerobolus stellatus v1.0   4 4
No Yes Piloderma croceum F 1598 v1.0   4 4
No Yes Serpula lacrymans var. lacrymans S7.9   2 2
No Yes Coniophora puteana   4 4
No Yes Hydnomerulius pinastri v2.0   5 5
No Yes Paxillus rubicundulus Ve08.2h10 v1.0   4 4
No Yes Pisolithus microcarpus 441 v1.0   4 4
No Yes Pisolithus tinctorius Marx 270 v1.0   4 4
No Yes Scleroderma citrinum Foug A v1.0   4 4
No Yes Coprinopsis cinerea okayama7 130 v3   5 5
No Yes Pleurotus ostreatus Oyster mushroom 4 4
No Yes Amanita thiersii Skay4041 v1.0   5 5
No Yes Amanita muscaria Koide v1.0 Fly agaric 5 5
No Yes Galerina marginata v1.0   6 6
No Yes Hebeloma cylindrosporum h7 v2.0   7 7
No Yes Laccaria bicolor S238N-H82   8 8
No Yes Agaricus bisporus var. bisporus   3 3
No Yes Schizophyllum commune   5 5
No Yes Stereum hirsutum FP-91666 SS1 v1.0   5 5
No Yes Heterobasidion annosum   1 1
No Yes Gloeophyllum trabeumv1.0   4 4
No Yes Punctularia strigosozonata v1.0   4 4
No Yes Sebacina vermifera MAFF 305830 v1.0   4 4
No Yes Fomitiporia mediterranea v1.0   5 5
No Yes Tulasnella calospora AL13/4D v1.0   3 3
No Yes Postia placenta   5 5
No Yes Wolfiporia cocos MD-104 SS10 v1.0   4 4
No Yes Fomitopsis pinicolav1.0   4 4
No Yes Fomitopsis pinicola FP-58527 SS1 v3.0   5 5
No Yes Phanerochaete chrysosporium RP-78 2.1   3 3
No Yes Dichomitus squalens   4 4
No Yes Trametes versicolor v1.0   5 5
No Yes Tremella mesenterica Witches' butter 3 3
No Yes Daldinia eschscholzii EC12 v1.0   7 7
No Yes Apiospora montagnei NRRL 25634 v1.0   7 7
No Yes Magnaporthe poae ATCC 64411 22   5 5
No Yes Magnaporthe grisea 70-15   6 6
No Yes Podospora anserina   6 6
No Yes Sporotrichum thermophile ATCC 42464   7 7
No Yes Thielavia terrestris NRRL 8126   7 7
No Yes Chaetomium globosum CBS 148.51   6 6
No Yes Neurospora tetrasperma   7 7
No Yes Neurospora discreta FGSC 8579   7 7
No Yes Neurospora crassa OR74A   7 7
No Yes Cryphonectria parasitica Chestnut blight fungus 7 7
No Yes Verticillium albo-atrum VaMs.102   5 5
No Yes Verticillium dahliae VdLs.17   7 7
No Yes Acremonium alcalophilumv 1.0   7 7
No Yes Glomerella graminicola 22   7 7
No Yes Fusarium graminearum   8 8
No Yes Nectria haematococca mpVI   8 8
No Yes Fusarium oxysporum f. sp. lycopersici 4286   8 8
No Yes Fusarium verticillioides 7600   7 7
No Yes Trichoderma asperellum CBS 433.97 v1.0   7 7
No Yes Trichoderma atroviride   6 6
No Yes Trichoderma citrinoviride v1.0   6 6
No Yes Trichoderma reesei 1.2   6 6
No Yes Trichoderma virens Gv29-8   7 7
No Yes Trichoderma longibrachiatum ATCC 18648 v1.0   6 6
No Yes Trichoderma harzianum CBS 226.95 v1.0   7 7
No Yes Amorphotheca resinae v1.0 Creosote fungus 7 7
No Yes Botrytis cinerea B05.10   8 8
No Yes Sclerotinia sclerotiorum   9 9
No Yes Blumeria graminis 22   5 5
No Yes Didymella exigua CBS 183.55 v1.0   7 7
No Yes Leptosphaeria maculans 22   7 7
No Yes Setosphaeria turcica v1.0   7 7
No Yes Cochliobolus miyabeanus ATCC 44560 v1.0   7 7
No Yes Cochliobolus victoriae FI3 v1.0   9 9
No Yes Cochliobolus carbonum 26-R-13 v1.0   7 7
No Yes Cochliobolus heterostrophus Southern corn leaf blight pathogen 7 7
No Yes Alternaria brassicicola   6 6
No Yes Cochliobolus lunatus m118 v2.0   7 7
No Yes Pyrenophora teres f. teres 22   7 7
No Yes Pyrenophora tritici-repentis   7 7
No Yes Stagonospora nodorum   6 6
No Yes Mycosphaerella graminicola IPO323   6 6
No Yes Zasmidium cellare ATCC 36951 v1.0   5 5
No Yes Dothistroma septosporum   6 6
No Yes Septoria musiva v1.0   5 5
No Yes Mycosphaerella fijiensis CIRAD86   5 5
No Yes Aureobasidium pullulans var. subglaciale EXF-2481 v1.0   6 6
No Yes Paracoccidioides brasiliensis Pb18   7 7
No Yes Coccidioides posadasii RMSCC 3488   7 7
No Yes Coccidioides immitis RS   7 7
No Yes Ajellomyces dermatitidis SLH14081   6 6
No Yes Histoplasma capsulatum class NAmI strain WU24   7 7
No Yes Microsporum canis CBS 113480   6 6
No Yes Trichophyton equinum CBS 127.97   6 6
No Yes Trichophyton verrucosum HKI 0517   7 7
No Yes Arthroderma benhamiae CBS 112371   7 7
No Yes Trichophyton tonsurans CBS 112818   8 8
No Yes Trichophyton rubrum CBS 118892   8 8
No Yes Uncinocarpus reesii 1704   7 7
No Yes Aspergillus zonatus v1.0   6 6
No Yes Penicillium chrysogenum Wisconsin 54-1255   5 5
No Yes Penicillium chrysogenum v1.0   5 5
No Yes Aspergillus acidus v1.0   6 6
No Yes Aspergillus fumigatus Af293   6 6
No Yes Aspergillus brasiliensis v1.0   7 7
No Yes Aspergillus nidulans FGSC A4   7 7
No Yes Aspergillus sydowii v1.0   6 6
No Yes Aspergillus versicolor v1.0   6 6
No Yes Aspergillus glaucus   6 6
No Yes Aspergillus carbonarius ITEM 5010   6 6
No Yes Neosartorya fischeri NRRL 181   6 6
No Yes Aspergillus terreus NIH2624   6 6
No Yes Aspergillus tubingensis v1.0   6 6
No Yes Aspergillus wentii v1.0   6 6
No Yes Aspergillus oryzae RIB40   4 4
No Yes Aspergillus niger 22   5 5
No Yes Aspergillus niger ATCC 1015   4 4
No Yes Aspergillus flavus NRRL3357   5 5
No Yes Aspergillus clavatus NRRL 1   6 6
No Yes Penicillium marneffei ATCC 18224   6 6
No Yes Tuber melanosporum Mel28 22   7 7
No Yes Tuber melanosporum Vittad Perigord truffle 7 7
No Yes Hansenula polymorpha v2.0   4 4
No Yes Dekkera bruxellensis CBS 2499 v2.0   2 2
No Yes Pichia membranifaciensv1.0   3 3
No Yes Candida tanzawaensis NRRL Y-17324 v1.0   5 5
No Yes Candida dubliniensis CD36   4 4
No Yes Candida tropicalis MYA-3404   4 4
No Yes Candida parapsilosis   5 5
No Yes Candida albicans SC5314   4 4
No Yes Lodderomyces elongisporus NRRL YB-4239   5 5
No Yes Babjeviella inositovora NRRL Y-12698 v1.0   3 3
No Yes Pichia stipitis CBS 6054   4 4
No Yes Candida guilliermondii ATCC 6260   5 5
No Yes Hyphopichia burtonii NRRL Y-1933 v1.0   3 3
No Yes Debaromyces hansenii   5 5
No Yes Wickerhamomyces anomalus   4 4
No Yes Pichia pastoris GS115   4 4
No Yes Hanseniaspora valbyensis NRRL Y-1626 v1.1   1 1
No Yes Yarrowia lipolytica CLIB122   4 4
No Yes Candida lusitaniae ATCC 42720   5 5
No Yes Metschnikowia bicuspidata NRRL YB-4993 v1.0   5 5
No Yes Vanderwaltozyma polyspora DSM 70294   5 5
No Yes Candida glabrata CBS138   5 5
No Yes Kluyveromyces thermotolerans CBS 6340   4 4
No Yes Lachancea kluyveri   4 4
No Yes Kluyveromyces waltii   4 4
No Yes Ashbya gossypii ATCC 10895   5 5
No Yes Zygosaccharomyces rouxii   6 6
No Yes Saccharomyces mikatae MIT   6 6
No Yes Saccharomyces paradoxus MIT   5 5
No Yes Saccharomyces cerevisiae 76 Baker's yeast 5 5
No Yes Saccharomyces bayanus MIT   4 4
No Yes Kluyveromyces lactis   4 4
No Yes Schizosaccharomyces cryophilus OY26 22   4 4
No Yes Schizosaccharomyces octosporus yFS286   4 4
No Yes Schizosaccharomyces japonicus yFS275   4 4
No Yes Schizosaccharomyces pombe Fission yeast 4 4
No Yes Catenaria anguillulae PL171 v1.0   7 7
No Yes Allomyces macrogynus ATCC 38327   21 21
No Yes Spizellomyces punctatus DAOM BR117   10 9
No Yes Dictyostelium discoideum   24 24
No Yes Dictyostelium purpureum   31 31
No Yes Entamoeba dispar 1.2   3 3
No Yes Entamoeba invadens 1.2   2 2
No Yes Entamoeba histolytica 1   2 2
No Yes Selaginella moellendorffii   21 21
No Yes Pinus taeda Loblolly pine 6 6
No Yes Picea abies Norway spruce 6 6
No Yes Eucalyptus grandis v201 Rose gum 25 25
No Yes Theobroma cacao B97-61/B2 v1 Cacao 10 10
No Yes Gossypium raimondii v221   51 51
No Yes Citrus clementina v165   19 19
No Yes Citrus sinensis v154 Sweet orange 23 23
No Yes Thellungiella halophila v173   15 15
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 20 20
No Yes Capsella rubella v183   14 14
No Yes Arabidopsis lyrata Lyrate rockcress 12 12
No Yes Arabidopsis thaliana 10 Thale cress 16 16
No Yes Carica papaya Papaya 8 8
No Yes Medicago truncatula Barrel medic 14 14
No Yes Phaseolus vulgaris v186 French bean 14 14
No Yes Glycine max v109 Soybean 35 35
No Yes Cucumis sativus v122 Cucumber 16 16
No Yes Fragaria vesca Wild strawberry 12 12
No Yes Malus domestica v196 Apple 23 23
No Yes Prunus persica v139 Peach 9 9
No Yes Linum usitatissimum v200 Flax 18 18
No Yes Manihot esculenta v147 Cassava 24 24
No Yes Populus trichocarpa v156 Black cottonwood 20 20
No Yes Vitis vinifera Wine grape 10 10
No Yes Mimulus guttatus v140 Spotted monkey flower 15 15
No Yes Solanum lycopersicum v.2.3 Tomato 12 12
No Yes Solanum tuberosum Potato 17 17
No Yes Actinidia chinensis Hongyang   14 14
No Yes Aquilegia coerulea v195   16 16
No Yes Triticum urartu 22   8 8
No Yes Triticum aestivum 22 Bread wheat 26 26
No Yes Aegilops tauschii 22   6 6
No Yes Brachypodium distachyon Stiff brome 14 14
No Yes Oryza barthii 22 African wild rice 11 11
No Yes Oryza meridionalis 22   12 12
No Yes Oryza glumaepatula 22   17 17
No Yes Oryza glaberrima African rice 12 12
No Yes Oryza punctata 22   11 11
No Yes Oryza nivara 22   15 15
No Yes Oryza brachyantha 22 Malo sina 12 12
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 16 16
No Yes Oryza sativa v193 Rice 16 16
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 19 19
No Yes Panicum virgatum v202 Switchgrass 19 19
No Yes Setaria italica v164 Foxtail millet 13 13
No Yes Zea mays subsp. mays Maize 30 30
No Yes Zea mays v181 Maize 31 31
No Yes Sorghum bicolor Sorghum 14 14
No Yes Musa balbisiana Balbis banana 16 16
No Yes Musa acuminata 22 Wild Malaysian banana 20 20
No Yes Amborella trichopoda 22   9 9
No Yes Physcomitrella patens   16 16
No Yes Coccomyxa subellipsoidea sp. C-169 v2   5 5
No Yes Asterochloris sp. Cgr/DA1pho v1.0   2 2
No Yes Chlorella variabilis sp. NC64A   6 6
No Yes Chlorella vulgaris   3 3
No Yes Volvox carteri f. nagariensis   8 8
No Yes Volvox carteri v199   7 7
No Yes Chlamydomonas reinhardtii 4.0   12 12
No Yes Ostreococcus sp. RCC809   6 6
No Yes Ostreococcus lucimarinus CCE9901   3 3
No Yes Ostreococcus tauri   3 3
No Yes Bathycoccus prasinos   4 4
No Yes Micromonas sp. RCC299   8 8
No Yes Micromonas pusilla CCMP1545 v3.0   7 7
No Yes Porphyridium purpureum 02_2012   4 4
No Yes Thecamonas trahens ATCC 50062   17 17
No Yes Bigelowiella natans CCMP2755 22   61 61
No Yes Giardia lamblia 2.3   2 2
No Yes Cyanophora paradoxa   23 20
No Yes Leishmania mexicana 2.4   2 2
No Yes Leishmania major strain Friedlin   2 2
No Yes Leishmania infantum JPCM5 2.4   2 2
No Yes Leishmania braziliensis MHOM/BR/75/M2904 2.4   2 2
No Yes Trypanosoma vivax   3 3
No Yes Trypanosoma cruzi strain CL Brener   4 4
No Yes Trypanosoma congolense 2.4   5 5
No Yes Trypanosoma brucei gambiense v4.1   4 4
No Yes Trypanosoma brucei TREU927 v4.1   4 4
No Yes Ectocarpus siliculosus   27 25
No Yes Aureococcus anophagefferens   10 8
No Yes Albugo laibachii 22   20 20
No Yes Pythium iwayamai DAOM BR242034 22   15 15
No Yes Pythium arrhenomanes ATCC 12531 22   13 13
No Yes Pythium ultimum v1.7-2   16 16
No Yes Pythium aphanidermatum DAOM BR444 22   18 18
No Yes Pythium irregulare DAOM BR486 22   17 17
No Yes Pythium vexans DAOM BR484 22   14 14
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 16 16
No Yes Phytophthora sojae 1.1   15 15
No Yes Phytophthora infestans T30-4   16 16
No Yes Phytophthora capsici   12 12
No Yes Hyaloperonospora arabidopsidis 22   5 5
No Yes Phaeodactylum tricornutumCCAP 1055/1   2 2
No Yes Fragilariopsis cylindrus   5 5
No Yes Thalassiosira pseudonana CCMP1335   3 3
No Yes Perkinsus marinus ATCC 50983   2 2
No Yes Paramecium tetraurelia   31 31
No Yes Tetrahymena thermophila SB210 1   8 7
No Yes Ichthyophthirius multifiliis strain G5   4 4
No Yes Cryptosporidium hominis   2 2
No Yes Cryptosporidium muris   3 3
No Yes Cryptosporidium parvum Iowa II   2 2
No Yes Neospora caninum   2 2
No Yes Toxoplasma gondii VEG   2 2
No Yes Toxoplasma gondii ME49   2 2
No Yes Toxoplasma gondii GT1   1 1
No Yes Plasmodium falciparum 3D7   4 4
No Yes Plasmodium vivax SaI-1 7.0   4 4
No Yes Plasmodium knowlesi strain H   4 4
No Yes Plasmodium yoelii ssp. yoelii 1   3 3
No Yes Plasmodium chabaudi   4 4
No Yes Plasmodium berghei ANKA   4 4
No Yes Symbiodinium minutum clade B1 v1.2   39 39
No Yes Naegleria gruberi   26 26
No Yes Trichomonas vaginalis   9 9
No Yes Guillardia theta CCMP2712 v1.0   52 50
No Yes Emiliania huxleyi CCMP1516   23 22
No Yes Sphaerochaeta pleomorpha str. Grapes   1 1
No Yes Burkholderia phymatum STM815   2 2
No Yes Burkholderia sp. RPE64   1 1
No Yes Burkholderia sp. CCGE1002   3 3
No Yes Nitrosomonas eutropha C91   1 1
No Yes Nitrosomonas europaea ATCC 19718   1 1
No Yes Ruegeria pomeroyi DSS-3   1 1
No Yes Sinorhizobium medicae WSM419   2 2
No Yes Sinorhizobium meliloti AK83   2 2
No Yes Agrobacterium radiobacter K84   1 1
No Yes Bradyrhizobium japonicum USDA 110   2 2
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 177 155
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 108 86
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 55 47
No Yes Ascaris suum Victoria/Ghent Pig roundworm 29 25
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 60 50
No Yes Cryptococcus neoformans var. grubii H99   4 4
No Yes Cryptococcus neoformans B-3501A   4 4
No Yes Cryptococcus neoformans JEC21   4 4
No Yes Paracoccidioides brasiliensis Pb01   7 7
No Yes Paracoccidioides brasiliensis Pb03   5 5
No Yes Coccidioides posadasii str. Silveira   7 7
No Yes Coccidioides immitis RMSCC 3703   6 6
No Yes Coccidioides immitis RMSCC 2394   7 7
No Yes Coccidioides immitis H538.4   6 6
No Yes Ajellomyces dermatitidis ER-3   6 6
No Yes Histoplasma capsulatum H143   7 7
No Yes Histoplasma capsulatum H88   7 7
No Yes Histoplasma capsulatum G186AR   6 6
No Yes Aspergillus fumigatus A1163   6 6
No Yes Candida albicans WO-1   4 4
No Yes Saccharomyces cerevisiae UC5   5 5
No Yes Saccharomyces cerevisiae PW5   5 5
No Yes Saccharomyces cerevisiae FL100   2 2
No Yes Saccharomyces cerevisiae CBS7960   4 4
No Yes Saccharomyces cerevisiae YJM269   4 4
No Yes Saccharomyces cerevisiae T7   5 5
No Yes Saccharomyces cerevisiae FostersB   4 4
No Yes Saccharomyces cerevisiae FostersO   4 4
No Yes Saccharomyces cerevisiae VL3   3 3
No Yes Saccharomyces cerevisiae Vin13   4 4
No Yes Saccharomyces cerevisiae LalvinQA23   3 3
No Yes Saccharomyces cerevisiae AWRI796   5 5
No Yes Saccharomyces cerevisiae Sigma1278b   5 5
No Yes Saccharomyces cerevisiae W303   5 5
No Yes Saccharomyces cerevisiae JAY291   5 5
No Yes Saccharomyces cerevisiae AWRI1631   3 3
No Yes Saccharomyces cerevisiae YPS163   3 3
No Yes Saccharomyces cerevisiae M22   1 1
No Yes Saccharomyces cerevisiae CLIB215   3 3
No Yes Saccharomyces cerevisiae Y10   3 3
No Yes Saccharomyces cerevisiae YJM789   5 5
No Yes Saccharomyces cerevisiae YJM789   5 5
No Yes Saccharomyces cerevisiae RM11-1a   5 5
No Yes Saccharomyces cerevisiae RM11-1a   4 4
No Yes Saccharomyces cerevisiae SGD (SGD) Baker's yeast 5 5
No Yes Schizosaccharomyces pombe 972h-   4 4
No Yes Batrachochytrium dendrobatidis JEL423   7 7
No Yes Batrachochytrium dendrobatidis JAM81   3 3
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 11 11
No Yes Hordeum vulgare 22 Domesticated barley 18 18
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 10 10
No Yes Trypanosoma brucei Lister 427 v4.1   4 4
No Yes Neospora caninum Nc-Liverpool 6.2   2 2
No Yes Plasmodium falciparum HB3   4 4
No Yes Plasmodium falciparum Dd2   3 3
No Yes Burkholderia sp. YI23   2 2
No Yes Sinorhizobium fredii USDA 257   1 1
No Yes Sinorhizobium fredii HH103   1 1
No Yes Sinorhizobium meliloti GR4   5 5
No Yes Sinorhizobium meliloti Rm41   3 3
No Yes Sinorhizobium meliloti SM11   3 3
No Yes Sinorhizobium meliloti BL225C   4 4
No Yes Sinorhizobium meliloti 1021   2 2
No Yes Rhizobium leguminosarum bv. trifolii WSM2304   1 1
No Yes Rhizobium leguminosarum bv. trifolii WSM1325   1 1
No Yes Bradyrhizobium sp. S23321   2 2
No Yes Bradyrhizobium japonicum USDA 6   3 3
No Yes Homo sapiens 75_37 (old version GRC) Human 500 412
No Yes Homo sapiens (NCBI version) Human 254 202
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 130 110
No Yes Heliconius numata (Incomplete)   7 7
No Yes Loa loa v3.3 (Request) Eye worm 26 21
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 28 23
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 25 20
No Yes Moniliophthora perniciosa FA553 (Genome survey)   3 3
No Yes Encephalitozoon intestinalis (endoparasite)   1 1
No Yes Encephalitozoon cuniculi (endoparasite)   1 1
No Yes Picea sitchensis (Incomplete) Sitka spruce 2 2
No Yes Lotus japonicus (Early assembly)   9 9
No Yes Malus x domestica (Duplicate) Apple 23 23
No Yes Ricinus communis (Early assembly) Castor bean 11 11
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   27 27
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 12 12
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 12 12
No Yes Phoenix dactylifera (Early draft) Date palm 5 5
No Yes Homo sapiens 69_37 Human 142 120
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 129 111
No Yes Gorilla gorilla 69_3.1 Western gorilla 132 113
No Yes Pongo abelii 69_2 Sumatran orangutan 125 106
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 125 105
No Yes Macaca mulatta 69_1 Rhesus monkey 124 106
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 128 110
No Yes Otolemur garnettii 69_3 Small-eared galago 129 109
No Yes Microcebus murinus 69_1 Gray mouse lemur 98 87
No Yes Rattus norvegicus 69_3.4 Norway rat 130 109
No Yes Mus musculus 69_38 House mouse 131 111
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 106 92
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 109 96
No Yes Cavia porcellus 69_3 Domestic guinea pig 142 110
No Yes Oryctolagus cuniculus 69_2 Rabbit 115 102
No Yes Ochotona princeps 69 American pika 105 92
No Yes Tupaia belangeri 69 Northern tree shrew 93 81
No Yes Sus scrofa 69_10.2 Pig 119 101
No Yes Bos taurus 69_3.1 Cattle 128 109
No Yes Vicugna pacos 69_1 Alpaca 65 56
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 124 107
No Yes Mustela putorius furo 69_1.0 Domestic ferret 130 113
No Yes Ailuropoda melanoleuca 69_1 Giant panda 129 109
No Yes Canis familiaris 69_3.1 Dog 134 114
No Yes Felis catus 69 Domestic cat 93 84
No Yes Equus caballus 69_2 Horse 127 111
No Yes Myotis lucifugus 69_2.0 Little brown bat 122 108
No Yes Pteropus vampyrus 69_1 Large flying fox 119 104
No Yes Sorex araneus 69_1 European shrew 74 69
No Yes Erinaceus europaeus 69 Western European hedgehog 82 72
No Yes Procavia capensis 69_1 Cape rock hyrax 101 87
No Yes Loxodonta africana 69_3 African savanna elephant 129 110
No Yes Echinops telfairi 69 Small Madagascar hedgehog 94 84
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 79 68
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 59 53
No Yes Macropus eugenii 69_1.0 Tammar wallaby 108 96
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 121 104
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 128 110
No Yes Ornithorhynchus anatinus 69_5 Platypus 107 91
No Yes Petromyzon marinus 69_7.0 Sea lamprey 55 45
No Yes Meleagris gallopavo 69_2 Turkey 113 98
No Yes Gallus gallus 69_2 Chicken 120 105
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 104 92
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 111 97
No Yes Anolis carolinensis 69_2.0 Green anole 130 113
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 111 96
No Yes Latimeria chalumnae 69_1 Coelacanth 135 116
No Yes Gadus morhua 69_1 Atlantic cod 148 123
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 164 134
No Yes Takifugu rubripes 69_4 Torafugu 162 132
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 169 140
No Yes Oryzias latipes 69_1 Japanese medaka 138 112
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 162 136
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 180 149
No Yes Danio rerio 69_9 Zebrafish 172 146
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 36 31
No Yes Ciona intestinalis 69 Vase tunicate 54 48
No Yes Drosophila melanogaster 69_5 Fruit fly 51 43
No Yes Caenorhabditis elegans 69_215 Roundworm 30 26
No Yes Saccharomyces cerevisiae 69_4 Baker's yeast 5 5
No Yes Arabidopsis thaliana 10 Thale cress 13 13
No Yes Dump bottom (Dump bottom) (meta-genome)   1 1
No Yes Dump top (Dump top) (meta-genome)   1 1
No Yes Endophytic microbiome from Rice (meta-genome)   1 1
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   3 3
No Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome)   2 2
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   4 4
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   2 2
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)   1 1
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   4 4
No Yes Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome)   1 1
No Yes NCBI 2017_08 genome   107223 84014
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   3 3
No Yes Protozoadb 2010_08 (Protozoadb)   102 102
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   2 2
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   1 1
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   8 8
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   8 8
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   8 8
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   11 11
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   36 36
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   28 28
No Yes STRING v9.0.5 (STRING)   4943 4258
No Yes Switchgrass field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing switchgr (meta-genome)   1 1
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   1 1
No Yes Uniprot 2018_03 genome   53726 45231
No Yes Global Ocean Sampling Expedition (GOS)   114 109
No Yes NCBI plasmid sequences (Plasmids)   26 26
No Yes NCBI viral sequences (Viral)   5 5
No Yes PDB chains (SCOP 1.75) (PDB)   33 33
No Yes Protein Data Bank (all PDB sequenc)   240 215
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   513 513
No Yes TargetDB (Targets)   148 140
No Yes UniProt viral sequences (Viral)   1 1

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