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Retrovirus capsid protein, N-terminal core domain superfamily domain assignments
in
Monodelphis domestica 69_5

Network of domain occurrence in all genomes


Assignment details

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Monodelphis domestica 69_5 has 103 significant domains in 103 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSMODP00000038710   1.57e-21   143-256   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000038715   1.57e-21   143-256   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000038736   1.18e-21   143-256   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000038743   3.14e-21   88-201   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000038783   1.57e-22   129-242   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000038796   1.41e-21   143-256   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000038861   8.63e-21   173-286   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000038863   1.57e-21   143-256   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000038884   0.00000000000157   3-84   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000038894   3.22e-49   25-139   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000038895   1.41e-20   308-421   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000038896   4.24e-23   166-277   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000038915   7.61e-17   164-269   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000038938   8.63e-32   156-307   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000038990   1.88e-21   129-242   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000038992   4.94e-22   129-242   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000039070   1.57e-21   143-256   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000039096   6.91e-22   88-201   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000039108   2.59e-21   308-421   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000039130   3.69e-20   301-414   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000039206   2.35e-21   143-256   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000039209   5.81e-19   143-241   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000039235   2.82e-21   308-421   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000039249   0.0000628   164-226   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000039314   6.75e-22   143-256   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000039367   2.51e-21   301-414   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000039372   2.9e-21   301-414   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000039400   1.33e-21   88-201   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000039427   1.49e-21   280-393   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000039461   0.0000000000000424   4-77   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000039468   1.26e-21   143-256   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000039492   1.88e-21   88-201   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000039546   1.73e-21   143-256   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000039579   3.69e-21   308-421   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000039605   1.49e-21   129-242   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000039609   2.04e-21   213-326   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000039658   1.41e-21   143-256   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000039697   1.65e-21   129-242   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000039716   1.02e-22   64-174   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000039717   1.57e-21   143-256   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000039738   3.53e-21   129-241   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000039744   1.18e-21   231-344   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000039764   1.18e-19   170-280   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000039791   1.73e-21   143-256   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000039812   3.22e-22   143-256   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000039822   7.85e-22   143-256   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000039837   3.37e-21   143-256   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000039897   2.04e-21   280-393   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000039898   1.96e-21   88-201   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000039900   1.96e-21   287-400   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000039955   4.32e-19   129-242   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000039956   1.65e-21   143-256   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000039981   1.41e-21   121-234   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000040034   7.38e-22   143-256   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000040077   8.63e-22   143-256   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000040106   3.22e-21   301-414   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000040193   1.57e-21   143-256   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000040217   1.33e-21   88-201   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000040247   2.67e-21   301-414   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000040277   1.65e-21   143-256   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000040284   1.02e-21   143-256   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000040380   3.14e-21   128-241   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000040384   1.02e-20   129-242   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000040404   8.63e-22   41-154   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000040420   8.63e-21   143-255   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000040463   8.63e-22   143-256   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000040484   2.75e-21   301-414   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000040523   1.8e-21   143-257   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000040524   1.57e-20   144-256   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000040566   1.18e-21   143-256   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000040570   6.83e-22   280-393   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000040584   1.65e-21   143-256   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000040600   1.33e-21   88-201   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000040606   1.18e-21   143-256   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000040638   1.57e-21   41-154   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000040660   2.35e-21   308-421   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000040681   0.00000000000157   3-84   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000040705   0.0000279   184-246   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000040720   1.41e-21   143-256   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000040748   1.49e-21   143-256   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000040765   8.63e-22   140-253   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000040774   0.0000029   308-358   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000040819   7.06e-22   41-154   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000040828   3.3e-20   143-250   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000040849   1.65e-21   143-256   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000040890   0.000000000000212   3-78   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000040894   1.18e-20   129-242   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000040906   7.22e-20   147-260   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000040924   1.73e-21   143-256   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000040935   6.04e-22   143-256   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000040945   2.28e-21   143-256   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000040965   6.98e-21   129-242   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000041026   1.18e-21   143-256   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000041055   8.63e-22   273-386   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000041144   1.73e-21   143-256   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000041149   9.42e-22   264-377   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000041167   2.04e-21   143-256   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000041170   5.02e-22   88-201   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000041174   2.35e-21   193-306   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000041190   9.42e-22   143-256   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000041208   7.22e-22   143-256   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000041245   0.0000000000157   124-194   Retrovirus capsid protein, N-terminal core domain  
ENSMODP00000041299   2.12e-21   238-351   Retrovirus capsid protein, N-terminal core domain  

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View all assignments containing a Retrovirus capsid protein, N-terminal core domain domain in each group of genomes.

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Select to display   Genome       Domains   Proteins
No Yes ALL   115773 115773
No Yes Gorilla gorilla 76_3.1 Western gorilla 1 1
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 1 1
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 30 30
No Yes Cavia porcellus 76_3 Domestic guinea pig 11 11
No Yes Oryctolagus cuniculus 76_2 Rabbit 2 2
No Yes Sus scrofa 76_10.2 Pig 16 16
No Yes Ovis aries 76_3.1 Sheep 53 53
No Yes Mustela putorius furo 76_1.0 Domestic ferret 2 2
No Yes Felis catus 76_6.2 Domestic cat 73 73
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 16 16
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 32 32
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 103 103
No Yes Ornithorhynchus anatinus 76_5 Platypus 1 1
No Yes Gallus gallus 76_4 Chicken 4 4
No Yes Anas platyrhynchos 76_1.0 Mallard 1 1
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 1 1
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 2 2
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 2 2
No Yes Anolis carolinensis 76_2.0 Green anole 16 16
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 1 1
No Yes Trypanosoma congolense 2.4   4 4
No Yes Gorilla gorilla 69_3.1 Western gorilla 1 1
No Yes Cavia porcellus 69_3 Domestic guinea pig 11 11
No Yes Sus scrofa 69_10.2 Pig 16 16
No Yes Mustela putorius furo 69_1.0 Domestic ferret 2 2
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 30 30
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 103 103
No Yes Ornithorhynchus anatinus 69_5 Platypus 1 1
No Yes Gallus gallus 69_2 Chicken 1 1
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 1 1
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 2 2
No Yes Anolis carolinensis 69_2.0 Green anole 3 3
No Yes Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes   1 1
No Yes Mouse Gut Community ob2 (meta-genome)   1 1
No Yes NCBI 2017_08 genome   1881 1863
No Yes Protozoadb 2010_08 (Protozoadb)   1 1
No Yes STRING v9.0.5 (STRING)   54 54
No Yes Uniprot 2018_03 genome   71776 71770
No Yes Global Ocean Sampling Expedition (GOS)   1 1
No Yes NCBI viral sequences (Viral)   58 58
No Yes PDB chains (SCOP 1.75) (PDB)   19 19
No Yes Protein Data Bank (all PDB sequenc)   3127 3127
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   5884 5884
No Yes UniProt viral sequences (Viral)   32297 32292

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