SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.


DBL homology domain (DH-domain) superfamily domain assignments


No domain assignments for these genomes.


Add assignments from groups of genomes

View all assignments containing a DBL homology domain (DH-domain) domain in each group of genomes.

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes ]


Add assignments from individual genomes

Select additional genomes you would like to see domain assignments for, then click 'Submit'.

Select to display   Genome       Domains   Proteins
No Yes ALL   122676 122676
No Yes Homo sapiens 76_38 Human 310 305
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 71 70
No Yes Gorilla gorilla 76_3.1 Western gorilla 99 97
No Yes Pongo abelii 76_2 Sumatran orangutan 78 76
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 78 75
No Yes Papio anubis 76 Olive baboon 83 82
No Yes Macaca mulatta 76_1 Rhesus monkey 135 135
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 205 203
No Yes Otolemur garnettii 76_3 Small-eared galago 74 72
No Yes Microcebus murinus 76_1 Gray mouse lemur 66 63
No Yes Rattus norvegicus 76_5.0 Norway rat 90 87
No Yes Mus musculus 76_38 House mouse 220 217
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 69 64
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 72 71
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 69 66
No Yes Cavia porcellus 76_3 Domestic guinea pig 69 67
No Yes Oryctolagus cuniculus 76_2 Rabbit 76 74
No Yes Ochotona princeps 76 American pika 65 63
No Yes Tupaia belangeri 76 Northern tree shrew 54 52
No Yes Sus scrofa 76_10.2 Pig 81 81
No Yes Bos taurus 76_3.1 Cattle 82 80
No Yes Ovis aries 76_3.1 Sheep 88 86
No Yes Vicugna pacos 76_1 Alpaca 48 44
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 73 70
No Yes Mustela putorius furo 76_1.0 Domestic ferret 73 71
No Yes Ailuropoda melanoleuca 76_1 Giant panda 85 84
No Yes Canis familiaris 76_3.1 Dog 114 111
No Yes Felis catus 76_6.2 Domestic cat 70 69
No Yes Equus caballus 76_2 Horse 110 107
No Yes Myotis lucifugus 76_2.0 Little brown bat 70 68
No Yes Pteropus vampyrus 76_1 Large flying fox 71 68
No Yes Sorex araneus 76_1 European shrew 49 47
No Yes Erinaceus europaeus 76 Western European hedgehog 56 52
No Yes Procavia capensis 76_1 Cape rock hyrax 71 67
No Yes Loxodonta africana 76_3 African savanna elephant 113 110
No Yes Echinops telfairi 76 Small Madagascar hedgehog 60 57
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 93 88
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 49 45
No Yes Macropus eugenii 76_1.0 Tammar wallaby 67 64
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 99 98
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 74 72
No Yes Ornithorhynchus anatinus 76_5 Platypus 84 83
No Yes Saccoglossus kowalevskii v3.0   61 61
No Yes Petromyzon marinus 76_7.0 Sea lamprey 37 37
No Yes Meleagris gallopavo 76_2 Turkey 67 65
No Yes Gallus gallus 76_4 Chicken 66 64
No Yes Anas platyrhynchos 76_1.0 Mallard 62 60
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 73 72
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 63 61
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 82 79
No Yes Anolis carolinensis 76_2.0 Green anole 65 64
No Yes Xenopus laevis African clawed frog 43 43
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 81 79
No Yes Latimeria chalumnae 76_1 Coelacanth 83 82
No Yes Lepisosteus oculatus 76 Spotted gar 104 100
No Yes Gadus morhua 76_1 Atlantic cod 110 105
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 146 142
No Yes Takifugu rubripes 76_4 Torafugu 349 337
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 112 108
No Yes Oryzias latipes 76_1 Japanese medaka 101 97
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 101 98
No Yes Poecilia formosa 76 Amazon molly 102 97
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 137 133
No Yes Astyanax mexicanus 76 Mexican tetra 105 101
No Yes Danio rerio 76_9 Zebrafish 169 165
No Yes Oikopleura dioica   24 24
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 49 49
No Yes Ciona intestinalis 76 Vase tunicate 23 23
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 44 42
No Yes Adineta vaga   69 69
No Yes Octopus bimaculoides 280   77 77
No Yes Crassostrea gigas 22 Pacific oyster 39 38
No Yes Lottia gigantea Owl limpet 34 33
No Yes Helobdella robusta   54 52
No Yes Capitella sp. I   40 39
No Yes Danaus plexippus OGS1.0 Monarch butterfly 28 27
No Yes Heliconius melpomene Postman butterfly 21 20
No Yes Bombyx mori Domestic silkworm 22 22
No Yes Nasonia vitripennis Jewel wasp 19 19
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 62 59
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 29 28
No Yes Linepithema humile v1.1 Argentine ant 29 29
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 29 29
No Yes Solenopsis invicta v.2.2.3 Red fire ant 26 26
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 26 26
No Yes Atta cephalotes v1.1   30 30
No Yes Camponotus floridanus v3.3 Florida carpenter ant 31 31
No Yes Lucilia cuprina Australian sheep blowfly 25 23
No Yes Drosophila grimshawi 1.3   25 24
No Yes Drosophila willistoni 1.3   27 26
No Yes Drosophila pseudoobscura 2.13   26 24
No Yes Drosophila persimilis 1.3   22 22
No Yes Drosophila suzukii   26 25
No Yes Drosophila yakuba 1.3   27 26
No Yes Drosophila simulans 1.3   21 21
No Yes Drosophila sechellia 1.3   24 24
No Yes Drosophila melanogaster 76_5 Fruit fly 105 103
No Yes Drosophila erecta 1.3   25 25
No Yes Drosophila ananassae 1.3   24 23
No Yes Drosophila virilis 1.2   26 26
No Yes Drosophila mojavensis 1.3   28 27
No Yes Megaselia scalaris 22   11 11
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 35 34
No Yes Culex pipiens quinquefasciatus Southern house mosquito 25 25
No Yes Anopheles darlingi 22 American malaria mosquito 24 24
No Yes Anopheles gambiae 49_3j African malaria mosquito 32 31
No Yes Tribolium castaneum 3.0 Red flour beetle 26 25
No Yes Pediculus humanus corporis (Early assembly) Human body louse 24 23
No Yes Acyrthosiphon pisum Pea aphid 24 23
No Yes Rhodnius prolixus 22   20 20
No Yes Daphnia pulex Common water flea 29 29
No Yes Strigamia maritima 22   30 29
No Yes Sarcoptes scabiei   25 25
No Yes Tetranychus urticae Two-spotted spider mite 27 27
No Yes Ixodes scapularis (Preliminary) Black-legged tick 21 21
No Yes Pristionchus pacificus   22 22
No Yes Meloidogyne incognita Southern root-knot nematode 15 15
No Yes Meloidogyne hapla   12 12
No Yes Onchocerca volvulus 22   25 25
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 31 31
No Yes Caenorhabditis japonica   22 22
No Yes Caenorhabditis brenneri   29 29
No Yes Caenorhabditis remanei   25 24
No Yes Caenorhabditis elegans 76_235 Roundworm 60 58
No Yes Caenorhabditis briggsae 2   22 22
No Yes Trichinella spiralis 22   21 21
No Yes Hymenolepis microstoma   22 22
No Yes Echinococcus multilocularis   17 17
No Yes Echinococcus granulosus   18 18
No Yes Taenia solium Pork tapeworm 20 20
No Yes Schistosoma mansoni   25 25
No Yes Mnemiopsis leidyi Sea walnut 24 24
No Yes Thelohanellus kitauei   9 9
No Yes Acropora digitifera v1.0   40 39
No Yes Nematostella vectensis 1.0 Starlet sea anemone 41 40
No Yes Hydra vulgaris   38 36
No Yes Amphimedon queenslandica   50 49
No Yes Trichoplax adhaerens   26 24
No Yes Proterospongia sp. ATCC 50818   28 27
No Yes Monosiga brevicollis   21 21
No Yes Sphaeroforma arctica JP610   21 21
No Yes Capsaspora owczarzaki ATCC 30864   31 31
No Yes Conidiobolus coronatus NRRL28638 v1.0   15 14
No Yes Mortierella verticillata NRRL 6337   16 16
No Yes Phycomyces blakesleeanus   35 35
No Yes Rhizopus oryzae RA 99-880   36 36
No Yes Mucor circinelloides   34 34
No Yes Rhizomucor miehei CAU432   31 31
No Yes Malassezia globosa CBS 7966   20 20
No Yes Sporisorium reilianum 22   12 12
No Yes Ustilago maydis   12 12
No Yes Mixia osmundae IAM 14324 v1.0   13 13
No Yes Cronartium quercuum f. sp. fusiforme G11 v1.0   16 16
No Yes Puccinia graminis f. sp. tritici CRL 75-36-700-3   15 15
No Yes Melampsora laricis-populina   16 16
No Yes Rhodotorula graminis WP1 v1.0   10 10
No Yes Sporobolomyces roseus IAM 13481   10 10
No Yes Microbotryum violaceum 22   15 15
No Yes Wallemia sebi v1.0   14 13
No Yes Sphaerobolus stellatus v1.0   13 12
No Yes Piloderma croceum F 1598 v1.0   16 14
No Yes Serpula lacrymans var. lacrymans S7.9   11 10
No Yes Coniophora puteana   15 14
No Yes Hydnomerulius pinastri v2.0   16 15
No Yes Paxillus rubicundulus Ve08.2h10 v1.0   14 13
No Yes Pisolithus microcarpus 441 v1.0   32 31
No Yes Pisolithus tinctorius Marx 270 v1.0   25 24
No Yes Scleroderma citrinum Foug A v1.0   14 13
No Yes Coprinopsis cinerea okayama7 130 v3   19 17
No Yes Pleurotus ostreatus Oyster mushroom 17 16
No Yes Amanita thiersii Skay4041 v1.0   17 15
No Yes Amanita muscaria Koide v1.0 Fly agaric 19 16
No Yes Galerina marginata v1.0   23 20
No Yes Hebeloma cylindrosporum h7 v2.0   18 16
No Yes Laccaria bicolor S238N-H82   22 19
No Yes Agaricus bisporus var. bisporus   18 16
No Yes Schizophyllum commune   16 14
No Yes Stereum hirsutum FP-91666 SS1 v1.0   13 12
No Yes Heterobasidion annosum   14 13
No Yes Gloeophyllum trabeumv1.0   17 15
No Yes Punctularia strigosozonata v1.0   18 16
No Yes Sebacina vermifera MAFF 305830 v1.0   20 18
No Yes Fomitiporia mediterranea v1.0   13 12
No Yes Tulasnella calospora AL13/4D v1.0   15 14
No Yes Postia placenta   22 20
No Yes Wolfiporia cocos MD-104 SS10 v1.0   15 14
No Yes Fomitopsis pinicolav1.0   16 15
No Yes Fomitopsis pinicola FP-58527 SS1 v3.0   15 14
No Yes Phanerochaete chrysosporium RP-78 2.1   14 12
No Yes Dichomitus squalens   15 14
No Yes Trametes versicolor v1.0   14 13
No Yes Tremella mesenterica Witches' butter 14 13
No Yes Daldinia eschscholzii EC12 v1.0   6 6
No Yes Apiospora montagnei NRRL 25634 v1.0   7 7
No Yes Magnaporthe poae ATCC 64411 22   6 6
No Yes Magnaporthe grisea 70-15   6 6
No Yes Podospora anserina   6 6
No Yes Sporotrichum thermophile ATCC 42464   6 6
No Yes Thielavia terrestris NRRL 8126   6 6
No Yes Chaetomium globosum CBS 148.51   6 6
No Yes Neurospora tetrasperma   6 6
No Yes Neurospora discreta FGSC 8579   6 6
No Yes Neurospora crassa OR74A   6 6
No Yes Cryphonectria parasitica Chestnut blight fungus 6 6
No Yes Verticillium albo-atrum VaMs.102   6 6
No Yes Verticillium dahliae VdLs.17   6 6
No Yes Acremonium alcalophilumv 1.0   6 6
No Yes Glomerella graminicola 22   6 6
No Yes Fusarium graminearum   6 6
No Yes Nectria haematococca mpVI   7 7
No Yes Fusarium oxysporum f. sp. lycopersici 4286   5 5
No Yes Fusarium verticillioides 7600   5 5
No Yes Trichoderma asperellum CBS 433.97 v1.0   5 5
No Yes Trichoderma atroviride   6 6
No Yes Trichoderma citrinoviride v1.0   4 4
No Yes Trichoderma reesei 1.2   6 6
No Yes Trichoderma virens Gv29-8   6 6
No Yes Trichoderma longibrachiatum ATCC 18648 v1.0   6 6
No Yes Trichoderma harzianum CBS 226.95 v1.0   6 6
No Yes Amorphotheca resinae v1.0 Creosote fungus 6 6
No Yes Botrytis cinerea B05.10   6 6
No Yes Sclerotinia sclerotiorum   6 6
No Yes Blumeria graminis 22   6 6
No Yes Didymella exigua CBS 183.55 v1.0   7 7
No Yes Leptosphaeria maculans 22   6 6
No Yes Setosphaeria turcica v1.0   7 7
No Yes Cochliobolus miyabeanus ATCC 44560 v1.0   6 6
No Yes Cochliobolus victoriae FI3 v1.0   6 6
No Yes Cochliobolus carbonum 26-R-13 v1.0   6 6
No Yes Cochliobolus heterostrophus Southern corn leaf blight pathogen 6 6
No Yes Alternaria brassicicola   7 7
No Yes Cochliobolus lunatus m118 v2.0   7 7
No Yes Pyrenophora teres f. teres 22   7 7
No Yes Pyrenophora tritici-repentis   6 6
No Yes Stagonospora nodorum   8 8
No Yes Mycosphaerella graminicola IPO323   5 5
No Yes Zasmidium cellare ATCC 36951 v1.0   6 6
No Yes Dothistroma septosporum   6 6
No Yes Septoria musiva v1.0   6 6
No Yes Mycosphaerella fijiensis CIRAD86   4 4
No Yes Aureobasidium pullulans var. subglaciale EXF-2481 v1.0   5 5
No Yes Paracoccidioides brasiliensis Pb18   6 6
No Yes Coccidioides posadasii RMSCC 3488   6 6
No Yes Coccidioides immitis RS   6 6
No Yes Ajellomyces dermatitidis SLH14081   6 6
No Yes Histoplasma capsulatum class NAmI strain WU24   5 5
No Yes Microsporum canis CBS 113480   6 6
No Yes Trichophyton equinum CBS 127.97   5 5
No Yes Trichophyton verrucosum HKI 0517   6 6
No Yes Arthroderma benhamiae CBS 112371   6 6
No Yes Trichophyton tonsurans CBS 112818   6 6
No Yes Trichophyton rubrum CBS 118892   6 6
No Yes Uncinocarpus reesii 1704   5 5
No Yes Aspergillus zonatus v1.0   6 6
No Yes Penicillium chrysogenum Wisconsin 54-1255   7 7
No Yes Penicillium chrysogenum v1.0   6 6
No Yes Aspergillus acidus v1.0   6 6
No Yes Aspergillus fumigatus Af293   6 6
No Yes Aspergillus brasiliensis v1.0   7 7
No Yes Aspergillus nidulans FGSC A4   6 6
No Yes Aspergillus sydowii v1.0   7 7
No Yes Aspergillus versicolor v1.0   7 7
No Yes Aspergillus glaucus   6 6
No Yes Aspergillus carbonarius ITEM 5010   6 6
No Yes Neosartorya fischeri NRRL 181   6 6
No Yes Aspergillus terreus NIH2624   6 6
No Yes Aspergillus tubingensis v1.0   6 6
No Yes Aspergillus wentii v1.0   6 6
No Yes Aspergillus oryzae RIB40   5 5
No Yes Aspergillus niger 22   7 7
No Yes Aspergillus niger ATCC 1015   3 3
No Yes Aspergillus flavus NRRL3357   6 6
No Yes Aspergillus clavatus NRRL 1   6 6
No Yes Penicillium marneffei ATCC 18224   6 6
No Yes Tuber melanosporum Mel28 22   6 6
No Yes Tuber melanosporum Vittad Perigord truffle 6 6
No Yes Hansenula polymorpha v2.0   4 4
No Yes Dekkera bruxellensis CBS 2499 v2.0   2 2
No Yes Pichia membranifaciensv1.0   4 4
No Yes Candida tanzawaensis NRRL Y-17324 v1.0   5 5
No Yes Candida dubliniensis CD36   4 4
No Yes Candida tropicalis MYA-3404   5 5
No Yes Candida parapsilosis   5 5
No Yes Candida albicans SC5314   4 4
No Yes Lodderomyces elongisporus NRRL YB-4239   4 4
No Yes Babjeviella inositovora NRRL Y-12698 v1.0   5 5
No Yes Pichia stipitis CBS 6054   4 4
No Yes Candida guilliermondii ATCC 6260   4 4
No Yes Hyphopichia burtonii NRRL Y-1933 v1.0   5 5
No Yes Debaromyces hansenii   5 5
No Yes Wickerhamomyces anomalus   6 6
No Yes Pichia pastoris GS115   4 4
No Yes Hanseniaspora valbyensis NRRL Y-1626 v1.1   7 7
No Yes Yarrowia lipolytica CLIB122   7 7
No Yes Candida lusitaniae ATCC 42720   5 5
No Yes Metschnikowia bicuspidata NRRL YB-4993 v1.0   4 4
No Yes Vanderwaltozyma polyspora DSM 70294   5 5
No Yes Candida glabrata CBS138   5 5
No Yes Kluyveromyces thermotolerans CBS 6340   6 6
No Yes Lachancea kluyveri   6 6
No Yes Kluyveromyces waltii   6 6
No Yes Ashbya gossypii ATCC 10895   6 6
No Yes Zygosaccharomyces rouxii   5 5
No Yes Saccharomyces mikatae MIT   6 6
No Yes Saccharomyces paradoxus MIT   6 6
No Yes Saccharomyces cerevisiae 76 Baker's yeast 6 6
No Yes Saccharomyces bayanus MIT   6 6
No Yes Kluyveromyces lactis   6 6
No Yes Schizosaccharomyces cryophilus OY26 22   8 8
No Yes Schizosaccharomyces octosporus yFS286   8 8
No Yes Schizosaccharomyces japonicus yFS275   8 8
No Yes Schizosaccharomyces pombe Fission yeast 8 8
No Yes Catenaria anguillulae PL171 v1.0   17 17
No Yes Allomyces macrogynus ATCC 38327   36 36
No Yes Spizellomyces punctatus DAOM BR117   20 20
No Yes Dictyostelium discoideum   48 47
No Yes Dictyostelium purpureum   47 46
No Yes Entamoeba dispar 1.2   68 65
No Yes Entamoeba invadens 1.2   105 99
No Yes Entamoeba histolytica 1   69 66
No Yes Cyanidioschyzon merolae strain 10D 22   1 1
No Yes Cyanidioschyzon merolae   1 1
No Yes Thecamonas trahens ATCC 50062   29 29
No Yes Bigelowiella natans CCMP2755 22   44 41
No Yes Ectocarpus siliculosus   4 4
No Yes Aureococcus anophagefferens   3 3
No Yes Albugo laibachii 22   6 3
No Yes Pythium iwayamai DAOM BR242034 22   3 2
No Yes Pythium arrhenomanes ATCC 12531 22   3 2
No Yes Pythium ultimum v1.7-2   3 2
No Yes Pythium aphanidermatum DAOM BR444 22   3 2
No Yes Pythium irregulare DAOM BR486 22   3 2
No Yes Pythium vexans DAOM BR484 22   3 2
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 3 2
No Yes Phytophthora sojae 1.1   3 2
No Yes Phytophthora infestans T30-4   3 2
No Yes Phytophthora capsici   1 1
No Yes Hyaloperonospora arabidopsidis 22   2 1
No Yes Paramecium tetraurelia   18 18
No Yes Tetrahymena thermophila SB210 1   2 2
No Yes Naegleria gruberi   27 27
No Yes Trichomonas vaginalis   22 22
No Yes Guillardia theta CCMP2712 v1.0   4 4
No Yes Emiliania huxleyi CCMP1516   7 6
No Yes Pedobacter saltans DSM 12145   1 1
No Yes Waddlia chondrophila WSU 86-1044   1 1
No Yes Candidatus Protochlamydia amoebophila UWE25   1 1
No Yes Sulfurimonas autotrophica DSM 16294   1 1
No Yes Legionella longbeachae NSW150   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 89 87
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 78 76
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 36 35
No Yes Ascaris suum Victoria/Ghent Pig roundworm 24 23
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 52 50
No Yes Cryptococcus neoformans var. grubii H99   16 15
No Yes Cryptococcus neoformans B-3501A   16 15
No Yes Cryptococcus neoformans JEC21   13 12
No Yes Paracoccidioides brasiliensis Pb01   6 6
No Yes Paracoccidioides brasiliensis Pb03   7 7
No Yes Coccidioides posadasii str. Silveira   6 6
No Yes Coccidioides immitis RMSCC 3703   6 6
No Yes Coccidioides immitis RMSCC 2394   6 6
No Yes Coccidioides immitis H538.4   5 5
No Yes Ajellomyces dermatitidis ER-3   6 6
No Yes Histoplasma capsulatum H143   6 6
No Yes Histoplasma capsulatum H88   6 6
No Yes Histoplasma capsulatum G186AR   6 6
No Yes Aspergillus fumigatus A1163   6 6
No Yes Candida albicans WO-1   3 3
No Yes Saccharomyces cerevisiae UC5   5 5
No Yes Saccharomyces cerevisiae PW5   5 5
No Yes Saccharomyces cerevisiae FL100   2 2
No Yes Saccharomyces cerevisiae CLIB324   1 1
No Yes Saccharomyces cerevisiae YJM269   3 3
No Yes Saccharomyces cerevisiae T7   6 6
No Yes Saccharomyces cerevisiae FostersB   3 3
No Yes Saccharomyces cerevisiae FostersO   3 3
No Yes Saccharomyces cerevisiae VL3   4 4
No Yes Saccharomyces cerevisiae Vin13   4 4
No Yes Saccharomyces cerevisiae LalvinQA23   6 6
No Yes Saccharomyces cerevisiae AWRI796   2 2
No Yes Saccharomyces cerevisiae Sigma1278b   6 6
No Yes Saccharomyces cerevisiae W303   6 6
No Yes Saccharomyces cerevisiae JAY291   6 6
No Yes Saccharomyces cerevisiae AWRI1631   6 6
No Yes Saccharomyces cerevisiae YPS163   1 1
No Yes Saccharomyces cerevisiae M22   1 1
No Yes Saccharomyces cerevisiae T73   3 3
No Yes Saccharomyces cerevisiae CLIB215   4 4
No Yes Saccharomyces cerevisiae YJM789   6 6
No Yes Saccharomyces cerevisiae YJM789   6 6
No Yes Saccharomyces cerevisiae RM11-1a   6 6
No Yes Saccharomyces cerevisiae RM11-1a   6 6
No Yes Saccharomyces cerevisiae SGD (SGD) Baker's yeast 6 6
No Yes Schizosaccharomyces pombe 972h-   8 8
No Yes Batrachochytrium dendrobatidis JEL423   18 18
No Yes Batrachochytrium dendrobatidis JAM81   15 14
No Yes Homo sapiens 75_37 (old version GRC) Human 349 343
No Yes Homo sapiens (NCBI version) Human 130 128
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 70 68
No Yes Heliconius numata (Incomplete)   3 3
No Yes Loa loa v3.3 (Request) Eye worm 22 22
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 23 23
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 21 21
No Yes Moniliophthora perniciosa FA553 (Genome survey)   8 8
No Yes Encephalitozoon intestinalis (endoparasite)   2 2
No Yes Encephalitozoon cuniculi (endoparasite)   2 2
No Yes Homo sapiens 69_37 Human 73 71
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 67 66
No Yes Gorilla gorilla 69_3.1 Western gorilla 73 71
No Yes Pongo abelii 69_2 Sumatran orangutan 72 70
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 71 68
No Yes Macaca mulatta 69_1 Rhesus monkey 69 69
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 75 74
No Yes Otolemur garnettii 69_3 Small-eared galago 72 70
No Yes Microcebus murinus 69_1 Gray mouse lemur 66 63
No Yes Rattus norvegicus 69_3.4 Norway rat 64 62
No Yes Mus musculus 69_38 House mouse 70 68
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 69 64
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 61 60
No Yes Cavia porcellus 69_3 Domestic guinea pig 67 65
No Yes Oryctolagus cuniculus 69_2 Rabbit 68 66
No Yes Ochotona princeps 69 American pika 65 63
No Yes Tupaia belangeri 69 Northern tree shrew 54 52
No Yes Sus scrofa 69_10.2 Pig 71 71
No Yes Bos taurus 69_3.1 Cattle 73 71
No Yes Vicugna pacos 69_1 Alpaca 48 44
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 73 70
No Yes Mustela putorius furo 69_1.0 Domestic ferret 73 71
No Yes Ailuropoda melanoleuca 69_1 Giant panda 70 69
No Yes Canis familiaris 69_3.1 Dog 73 71
No Yes Felis catus 69 Domestic cat 64 60
No Yes Equus caballus 69_2 Horse 73 71
No Yes Myotis lucifugus 69_2.0 Little brown bat 67 65
No Yes Pteropus vampyrus 69_1 Large flying fox 71 68
No Yes Sorex araneus 69_1 European shrew 49 47
No Yes Erinaceus europaeus 69 Western European hedgehog 56 52
No Yes Procavia capensis 69_1 Cape rock hyrax 71 67
No Yes Loxodonta africana 69_3 African savanna elephant 74 72
No Yes Echinops telfairi 69 Small Madagascar hedgehog 60 57
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 58 54
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 49 45
No Yes Macropus eugenii 69_1.0 Tammar wallaby 67 64
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 71 70
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 74 72
No Yes Ornithorhynchus anatinus 69_5 Platypus 71 70
No Yes Petromyzon marinus 69_7.0 Sea lamprey 35 35
No Yes Meleagris gallopavo 69_2 Turkey 60 58
No Yes Gallus gallus 69_2 Chicken 60 58
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 71 70
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 63 61
No Yes Anolis carolinensis 69_2.0 Green anole 62 61
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 66 65
No Yes Latimeria chalumnae 69_1 Coelacanth 73 72
No Yes Gadus morhua 69_1 Atlantic cod 97 92
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 106 103
No Yes Takifugu rubripes 69_4 Torafugu 96 92
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 95 91
No Yes Oryzias latipes 69_1 Japanese medaka 82 78
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 99 96
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 103 99
No Yes Danio rerio 69_9 Zebrafish 99 96
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 21 21
No Yes Ciona intestinalis 69 Vase tunicate 21 21
No Yes Drosophila melanogaster 69_5 Fruit fly 25 24
No Yes Caenorhabditis elegans 69_215 Roundworm 21 20
No Yes Saccharomyces cerevisiae 69_4 Baker's yeast 6 6
No Yes 1_Upper_euphotic (meta-genome)   1 1
No Yes Air microbial communities Singapore indoor air filters 2 (meta-genome)   1 1
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   2 2
No Yes Dump top (Dump top) (meta-genome)   1 1
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   3 3
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   1 1
No Yes NCBI 2017_08 genome   57804 55885
No Yes Protozoadb 2010_08 (Protozoadb)   318 306
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   2 2
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   2939 2856
No Yes Uniprot 2018_03 genome   36479 35480
No Yes Global Ocean Sampling Expedition (GOS)   29 29
No Yes PDB chains (SCOP 1.75) (PDB)   16 16
No Yes Protein Data Bank (all PDB sequenc)   115 109
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   243 243
No Yes TargetDB (Targets)   110 109

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]