Select to display | Genome | | Domains | Proteins |
No Yes | ALL | | 36000 | 36000 |
No Yes | Saccoglossus kowalevskii v3.0 | | 60 | 56 |
No Yes | Oikopleura dioica | | 22 | 19 |
No Yes | Ciona savignyi 76_2.0 | Pacific transparent sea squirt | 24 | 22 |
No Yes | Ciona intestinalis 76 | Vase tunicate | 8 | 8 |
No Yes | Strongylocentrotus purpuratus v3.1 | Purple sea urchin | 3 | 3 |
No Yes | Adineta vaga | | 8 | 8 |
No Yes | Octopus bimaculoides 280 | | 1 | 1 |
No Yes | Crassostrea gigas 22 | Pacific oyster | 7 | 6 |
No Yes | Lottia gigantea | Owl limpet | 13 | 13 |
No Yes | Nasonia vitripennis | Jewel wasp | 1 | 1 |
No Yes | Apis mellifera 38.2d (Not maintained) | Honey bee | 3 | 3 |
No Yes | Linepithema humile v1.1 | Argentine ant | 1 | 1 |
No Yes | Pogonomyrmex barbatus v1.2 | Red harvester ant | 1 | 1 |
No Yes | Solenopsis invicta v.2.2.3 | Red fire ant | 1 | 1 |
No Yes | Acromyrmex echinatior v3.8 | Panamanian leafcutter ant | 1 | 1 |
No Yes | Atta cephalotes v1.1 | | 1 | 1 |
No Yes | Camponotus floridanus v3.3 | Florida carpenter ant | 5 | 4 |
No Yes | Tribolium castaneum 3.0 | Red flour beetle | 1 | 1 |
No Yes | Pediculus humanus corporis (Early assembly) | Human body louse | 1 | 1 |
No Yes | Acyrthosiphon pisum | Pea aphid | 2 | 2 |
No Yes | Daphnia pulex | Common water flea | 4 | 4 |
No Yes | Mnemiopsis leidyi | Sea walnut | 1 | 1 |
No Yes | Acropora digitifera v1.0 | | 2 | 2 |
No Yes | Nematostella vectensis 1.0 | Starlet sea anemone | 2 | 2 |
No Yes | Capsaspora owczarzaki ATCC 30864 | | 1 | 1 |
No Yes | Mortierella verticillata NRRL 6337 | | 3 | 3 |
No Yes | Phycomyces blakesleeanus | | 3 | 3 |
No Yes | Rhizopus oryzae RA 99-880 | | 4 | 4 |
No Yes | Mucor circinelloides | | 6 | 6 |
No Yes | Rhizomucor miehei CAU432 | | 3 | 3 |
No Yes | Sporisorium reilianum 22 | | 1 | 1 |
No Yes | Ustilago maydis | | 1 | 1 |
No Yes | Cronartium quercuum f. sp. fusiforme G11 v1.0 | | 1 | 1 |
No Yes | Melampsora laricis-populina | | 1 | 1 |
No Yes | Sphaerobolus stellatus v1.0 | | 1 | 1 |
No Yes | Piloderma croceum F 1598 v1.0 | | 1 | 1 |
No Yes | Serpula lacrymans var. lacrymans S7.9 | | 1 | 1 |
No Yes | Coniophora puteana | | 1 | 1 |
No Yes | Hydnomerulius pinastri v2.0 | | 1 | 1 |
No Yes | Paxillus rubicundulus Ve08.2h10 v1.0 | | 1 | 1 |
No Yes | Pisolithus microcarpus 441 v1.0 | | 1 | 1 |
No Yes | Pisolithus tinctorius Marx 270 v1.0 | | 1 | 1 |
No Yes | Scleroderma citrinum Foug A v1.0 | | 1 | 1 |
No Yes | Coprinopsis cinerea okayama7 130 v3 | | 1 | 1 |
No Yes | Pleurotus ostreatus | Oyster mushroom | 1 | 1 |
No Yes | Amanita thiersii Skay4041 v1.0 | | 1 | 1 |
No Yes | Amanita muscaria Koide v1.0 | Fly agaric | 1 | 1 |
No Yes | Galerina marginata v1.0 | | 1 | 1 |
No Yes | Hebeloma cylindrosporum h7 v2.0 | | 1 | 1 |
No Yes | Laccaria bicolor S238N-H82 | | 1 | 1 |
No Yes | Agaricus bisporus var. bisporus | | 1 | 1 |
No Yes | Schizophyllum commune | | 1 | 1 |
No Yes | Stereum hirsutum FP-91666 SS1 v1.0 | | 1 | 1 |
No Yes | Heterobasidion annosum | | 1 | 1 |
No Yes | Gloeophyllum trabeumv1.0 | | 1 | 1 |
No Yes | Punctularia strigosozonata v1.0 | | 1 | 1 |
No Yes | Sebacina vermifera MAFF 305830 v1.0 | | 1 | 1 |
No Yes | Fomitiporia mediterranea v1.0 | | 1 | 1 |
No Yes | Tulasnella calospora AL13/4D v1.0 | | 2 | 2 |
No Yes | Phanerochaete chrysosporium RP-78 2.1 | | 1 | 1 |
No Yes | Trametes versicolor v1.0 | | 1 | 1 |
No Yes | Tremella mesenterica | Witches' butter | 1 | 1 |
No Yes | Aureobasidium pullulans var. subglaciale EXF-2481 v1.0 | | 1 | 1 |
No Yes | Spizellomyces punctatus DAOM BR117 | | 1 | 1 |
No Yes | Dictyostelium discoideum | | 8 | 8 |
No Yes | Dictyostelium purpureum | | 8 | 8 |
No Yes | Selaginella moellendorffii | | 24 | 24 |
No Yes | Pinus taeda | Loblolly pine | 55 | 52 |
No Yes | Picea abies | Norway spruce | 29 | 29 |
No Yes | Eucalyptus grandis v201 | Rose gum | 27 | 27 |
No Yes | Theobroma cacao B97-61/B2 v1 | Cacao | 19 | 18 |
No Yes | Gossypium raimondii v221 | | 52 | 52 |
No Yes | Citrus clementina v165 | | 25 | 25 |
No Yes | Citrus sinensis v154 | Sweet orange | 31 | 31 |
No Yes | Thellungiella halophila v173 | | 24 | 24 |
No Yes | Brassica rapa Chiifu-401 1.2 | Field mustard | 40 | 40 |
No Yes | Capsella rubella v183 | | 23 | 23 |
No Yes | Arabidopsis lyrata | Lyrate rockcress | 25 | 25 |
No Yes | Arabidopsis thaliana 10 | Thale cress | 26 | 26 |
No Yes | Carica papaya | Papaya | 19 | 19 |
No Yes | Medicago truncatula | Barrel medic | 30 | 30 |
No Yes | Phaseolus vulgaris v186 | French bean | 25 | 25 |
No Yes | Glycine max v109 | Soybean | 41 | 41 |
No Yes | Cucumis sativus v122 | Cucumber | 20 | 20 |
No Yes | Fragaria vesca | Wild strawberry | 24 | 24 |
No Yes | Malus domestica v196 | Apple | 28 | 28 |
No Yes | Prunus persica v139 | Peach | 19 | 19 |
No Yes | Linum usitatissimum v200 | Flax | 42 | 42 |
No Yes | Manihot esculenta v147 | Cassava | 26 | 26 |
No Yes | Populus trichocarpa v156 | Black cottonwood | 30 | 30 |
No Yes | Vitis vinifera | Wine grape | 21 | 20 |
No Yes | Mimulus guttatus v140 | Spotted monkey flower | 27 | 27 |
No Yes | Solanum lycopersicum v.2.3 | Tomato | 20 | 20 |
No Yes | Solanum tuberosum | Potato | 27 | 27 |
No Yes | Actinidia chinensis Hongyang | | 23 | 22 |
No Yes | Aquilegia coerulea v195 | | 34 | 34 |
No Yes | Triticum urartu 22 | | 21 | 21 |
No Yes | Triticum aestivum 22 | Bread wheat | 49 | 49 |
No Yes | Aegilops tauschii 22 | | 26 | 25 |
No Yes | Brachypodium distachyon | Stiff brome | 22 | 22 |
No Yes | Oryza barthii 22 | African wild rice | 25 | 24 |
No Yes | Oryza meridionalis 22 | | 24 | 24 |
No Yes | Oryza glumaepatula 22 | | 27 | 27 |
No Yes | Oryza glaberrima | African rice | 22 | 22 |
No Yes | Oryza punctata 22 | | 26 | 26 |
No Yes | Oryza nivara 22 | | 31 | 31 |
No Yes | Oryza brachyantha 22 | Malo sina | 24 | 24 |
No Yes | Oryza sativa ssp. japonica 5.0 | Japanese rice | 27 | 27 |
No Yes | Oryza sativa v193 | Rice | 27 | 27 |
No Yes | Phyllostachys heterocyclavar. pubescens | Kikko-chiku | 23 | 23 |
No Yes | Panicum virgatum v202 | Switchgrass | 51 | 51 |
No Yes | Setaria italica v164 | Foxtail millet | 25 | 25 |
No Yes | Zea mays subsp. mays | Maize | 27 | 27 |
No Yes | Zea mays v181 | Maize | 32 | 32 |
No Yes | Sorghum bicolor | Sorghum | 23 | 23 |
No Yes | Musa balbisiana | Balbis banana | 33 | 31 |
No Yes | Musa acuminata 22 | Wild Malaysian banana | 33 | 33 |
No Yes | Amborella trichopoda 22 | | 23 | 23 |
No Yes | Physcomitrella patens | | 19 | 19 |
No Yes | Coccomyxa subellipsoidea sp. C-169 v2 | | 11 | 11 |
No Yes | Asterochloris sp. Cgr/DA1pho v1.0 | | 7 | 7 |
No Yes | Chlorella variabilis sp. NC64A | | 4 | 4 |
No Yes | Chlorella vulgaris | | 11 | 11 |
No Yes | Volvox carteri f. nagariensis | | 3 | 3 |
No Yes | Volvox carteri v199 | | 3 | 3 |
No Yes | Chlamydomonas reinhardtii 4.0 | | 3 | 3 |
No Yes | Thalassiosira pseudonana CCMP1335 | | 1 | 1 |
No Yes | Acaryochloris marina MBIC11017 | | 1 | 1 |
No Yes | Synechocystis sp. PCC 6803 | | 1 | 1 |
No Yes | Synechococcus sp. PCC 6312 | | 1 | 1 |
No Yes | Microcoleus sp. PCC 7113 | | 1 | 1 |
No Yes | Gloeocapsa sp. PCC 7428 | | 1 | 1 |
No Yes | Rivularia sp. PCC 7116 | | 1 | 1 |
No Yes | Thermobispora bispora DSM 43833 | | 1 | 1 |
No Yes | Acidothermus cellulolyticus 11B | | 3 | 3 |
No Yes | Geodermatophilus obscurus DSM 43160 | | 1 | 1 |
No Yes | Kineococcus radiotolerans SRS30216 | | 1 | 1 |
No Yes | Catenulispora acidiphila DSM 44928 | | 3 | 3 |
No Yes | Thermobifida fusca YX | | 3 | 3 |
No Yes | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 | | 2 | 2 |
No Yes | Streptosporangium roseum DSM 43021 | | 4 | 4 |
No Yes | Kitasatospora setae KM-6054 | | 4 | 4 |
No Yes | Streptomyces coelicolor A3(2) | | 3 | 3 |
No Yes | Streptomyces sp. PAMC26508 | | 2 | 2 |
No Yes | Streptomyces flavogriseus ATCC 33331 | | 2 | 2 |
No Yes | Streptomyces sp. SirexAA-E | | 2 | 2 |
No Yes | Streptomyces bingchenggensis BCW-1 | | 4 | 4 |
No Yes | Streptomyces violaceusniger Tu 4113 | | 3 | 3 |
No Yes | Streptomyces avermitilis MA-4680 | | 1 | 1 |
No Yes | Streptomyces scabiei 87.22 | | 3 | 3 |
No Yes | Streptomyces hygroscopicus subsp. jinggangensis 5008 | | 1 | 1 |
No Yes | Actinosynnema mirum DSM 43827 | | 2 | 2 |
No Yes | Amycolatopsis mediterranei U32 | | 5 | 5 |
No Yes | Salinispora arenicola CNS-205 | | 1 | 1 |
No Yes | Salinispora tropica CNB-440 | | 2 | 2 |
No Yes | Verrucosispora maris AB-18-032 | | 3 | 3 |
No Yes | Micromonospora sp. L5 | | 3 | 3 |
No Yes | Micromonospora aurantiaca ATCC 27029 | | 3 | 3 |
No Yes | Actinoplanes sp. N902-109 | | 3 | 3 |
No Yes | Actinoplanes sp. SE50/110 | | 2 | 2 |
No Yes | Actinoplanes missouriensis 431 | | 3 | 3 |
No Yes | Mycobacterium vanbaalenii PYR-1 | | 1 | 1 |
No Yes | Jonesia denitrificans DSM 20603 | | 1 | 1 |
No Yes | Xylanimonas cellulosilytica DSM 15894 | | 1 | 1 |
No Yes | Cellulomonas flavigena DSM 20109 | | 6 | 6 |
No Yes | Cellulomonas fimi ATCC 484 | | 6 | 6 |
No Yes | [Cellvibrio] gilvus ATCC 13127 | | 3 | 3 |
No Yes | Bifidobacterium longum subsp. longum JDM301 | | 1 | 1 |
No Yes | Bifidobacterium adolescentis ATCC 15703 | | 1 | 1 |
No Yes | Anaerolinea thermophila UNI-1 | | 1 | 1 |
No Yes | Herpetosiphon aurantiacus DSM 785 | | 7 | 7 |
No Yes | Chloroflexus aggregans DSM 9485 | | 1 | 1 |
No Yes | Deinococcus geothermalis DSM 11300 | | 1 | 1 |
No Yes | Megamonas hypermegale | | 1 | 1 |
No Yes | Selenomonas ruminantium subsp. lactilytica TAM6421 | | 1 | 1 |
No Yes | Clostridium clariflavum DSM 19732 | | 16 | 15 |
No Yes | Clostridium cellulolyticum H10 | | 17 | 17 |
No Yes | Clostridium thermocellum ATCC 27405 | | 19 | 19 |
No Yes | Ethanoligenens harbinense YUAN-3 | | 1 | 1 |
No Yes | Ruminococcus albus 7 | | 10 | 10 |
No Yes | Desulfosporosinus acidiphilus SJ4 | | 1 | 1 |
No Yes | Clostridium phytofermentans ISDg | | 3 | 3 |
No Yes | Clostridium lentocellum DSM 5427 | | 8 | 8 |
No Yes | Eubacterium rectale M104/1 | | 1 | 1 |
No Yes | Eubacterium rectale ATCC 33656 | | 1 | 1 |
No Yes | Coprococcus sp. ART55/1 | | 2 | 2 |
No Yes | Roseburia hominis A2-183 | | 1 | 1 |
No Yes | Roseburia intestinalis | | 1 | 1 |
No Yes | Butyrivibrio proteoclasticus B316 | | 3 | 3 |
No Yes | Butyrivibrio fibrisolvens | | 3 | 3 |
No Yes | Clostridium sp. BNL1100 | | 18 | 18 |
No Yes | Clostridium cellulovorans 743B | | 14 | 14 |
No Yes | Clostridium acetobutylicum ATCC 824 | | 5 | 5 |
No Yes | Mahella australiensis 50-1 BON | | 4 | 4 |
No Yes | Caldicellulosiruptor obsidiansis OB47 | | 4 | 3 |
No Yes | Caldicellulosiruptor kronotskyensis 2002 | | 5 | 4 |
No Yes | Caldicellulosiruptor lactoaceticus 6A | | 3 | 3 |
No Yes | Caldicellulosiruptor kristjanssonii 177R1B | | 1 | 1 |
No Yes | Caldicellulosiruptor saccharolyticus DSM 8903 | | 3 | 2 |
No Yes | Caldicellulosiruptor bescii DSM 6725 | | 5 | 4 |
No Yes | Lactobacillus crispatus ST1 | | 2 | 2 |
No Yes | Lactobacillus amylovorus GRL1118 | | 1 | 1 |
No Yes | Lactobacillus reuteri DSM 20016 | | 1 | 1 |
No Yes | Lactobacillus brevis ATCC 367 | | 1 | 1 |
No Yes | Lactobacillus acidophilus 30SC | | 1 | 1 |
No Yes | Lactococcus lactis subsp. cremoris MG1363 | | 1 | 1 |
No Yes | Streptococcus sp. I-P16 | | 1 | 1 |
No Yes | Streptococcus sp. I-G2 | | 1 | 1 |
No Yes | Streptococcus parasanguinis ATCC 15912 | | 1 | 1 |
No Yes | Streptococcus mutans NN2025 | | 1 | 1 |
No Yes | Streptococcus sanguinis SK36 | | 1 | 1 |
No Yes | Streptococcus salivarius 57.I | | 1 | 1 |
No Yes | Streptococcus oralis Uo5 | | 1 | 1 |
No Yes | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 | | 1 | 1 |
No Yes | Paenibacillus sp. JDR-2 | | 2 | 2 |
No Yes | Paenibacillus terrae HPL-003 | | 1 | 1 |
No Yes | Paenibacillus mucilaginosus 3016 | | 4 | 4 |
No Yes | Paenibacillus polymyxa M1 | | 1 | 1 |
No Yes | Bacillus licheniformis DSM 13 = ATCC 14580 | | 2 | 2 |
No Yes | Bacillus halodurans C-125 | | 1 | 1 |
No Yes | Bacillus anthracis str. A0248 | | 1 | 1 |
No Yes | Bacillus cellulosilyticus DSM 2522 | | 2 | 2 |
No Yes | Bacillus pumilus SAFR-032 | | 2 | 2 |
No Yes | Melioribacter roseus P3M | | 2 | 2 |
No Yes | Ignavibacterium album JCM 16511 | | 2 | 2 |
No Yes | Chlorobium luteolum DSM 273 | | 1 | 1 |
No Yes | Haliscomenobacter hydrossis DSM 1100 | | 1 | 1 |
No Yes | Fibrella aestuarina | | 2 | 2 |
No Yes | Dyadobacter fermentans DSM 18053 | | 2 | 2 |
No Yes | Cytophaga hutchinsonii ATCC 33406 | | 9 | 9 |
No Yes | Spirosoma linguale DSM 74 | | 2 | 2 |
No Yes | Runella slithyformis DSM 19594 | | 1 | 1 |
No Yes | Paludibacter propionicigenes WB4 | | 2 | 2 |
No Yes | Prevotella ruminicola 23 | | 1 | 1 |
No Yes | Maribacter sp. HTCC2170 | | 1 | 1 |
No Yes | Flavobacterium branchiophilum FL-15 | | 1 | 1 |
No Yes | Flavobacterium johnsoniae UW101 | | 2 | 2 |
No Yes | Fibrobacter succinogenes subsp. succinogenes S85 | | 11 | 11 |
No Yes | Isosphaera pallida ATCC 43644 | | 1 | 1 |
No Yes | Opitutus terrae PB90-1 | | 4 | 4 |
No Yes | Spirochaeta caldaria DSM 7334 | | 2 | 2 |
No Yes | Treponema succinifaciens DSM 2489 | | 1 | 1 |
No Yes | Spirochaeta thermophila DSM 6192 | | 3 | 3 |
No Yes | Candidatus Solibacter usitatus Ellin6076 | | 1 | 1 |
No Yes | Acidobacterium capsulatum ATCC 51196 | | 1 | 1 |
No Yes | Candidatus Methylomirabilis oxyfera | | 1 | 1 |
No Yes | Desulfobacca acetoxidans DSM 11109 | | 1 | 1 |
No Yes | Sorangium cellulosum 'So ce 56' | | 5 | 5 |
No Yes | Anaeromyxobacter dehalogenans 2CP-1 | | 1 | 1 |
No Yes | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 | | 1 | 1 |
No Yes | Burkholderia pseudomallei 1106a | | 1 | 1 |
No Yes | Ramlibacter tataouinensis TTB310 | | 3 | 3 |
No Yes | Methylovorus sp. MP688 | | 1 | 1 |
No Yes | Methylovorus glucosetrophus SIP3-4 | | 1 | 1 |
No Yes | Asticcacaulis excentricus CB 48 | | 2 | 2 |
No Yes | Caulobacter crescentus NA1000 | | 1 | 1 |
No Yes | Caulobacter segnis ATCC 21756 | | 1 | 1 |
No Yes | Novosphingobium sp. PP1Y | | 1 | 1 |
No Yes | Sphingobium japonicum UT26S | | 1 | 1 |
No Yes | Zymomonas mobilis subsp. mobilis NCIMB 11163 | | 1 | 1 |
No Yes | Maricaulis maris MCS10 | | 1 | 1 |
No Yes | Hirschia baltica ATCC 49814 | | 1 | 1 |
No Yes | Rhodobacter sphaeroides ATCC 17029 | | 1 | 1 |
No Yes | Tistrella mobilis KA081020-065 | | 1 | 1 |
No Yes | Azospirillum lipoferum 4B | | 1 | 1 |
No Yes | Azospirillum sp. B510 | | 1 | 1 |
No Yes | Gluconacetobacter xylinus NBRC 3288 | | 1 | 1 |
No Yes | Starkeya novella DSM 506 | | 1 | 1 |
No Yes | Methylobacterium chloromethanicum CM4 | | 2 | 2 |
No Yes | Methylobacterium extorquens AM1 | | 1 | 1 |
No Yes | Methylobacterium sp. 4-46 | | 1 | 1 |
No Yes | Methylobacterium populi BJ001 | | 1 | 1 |
No Yes | Methylobacterium nodulans ORS 2060 | | 1 | 1 |
No Yes | Methylobacterium radiotolerans JCM 2831 | | 2 | 2 |
No Yes | Sinorhizobium fredii NGR234 | | 1 | 1 |
No Yes | Sinorhizobium medicae WSM419 | | 1 | 1 |
No Yes | Genome sequence of Rhizobium sp. strain IRBG74 | | 1 | 1 |
No Yes | Rhizobium etli CIAT 652 | | 1 | 1 |
No Yes | Rhizobium leguminosarum bv. viciae 3841 | | 1 | 1 |
No Yes | Agrobacterium tumefaciens str. C58 | | 1 | 1 |
No Yes | Agrobacterium radiobacter K84 | | 1 | 1 |
No Yes | Agrobacterium sp. H13-3 | | 1 | 1 |
No Yes | Pelagibacterium halotolerans B2 | | 1 | 1 |
No Yes | Saccharophagus degradans 2-40 | | 3 | 3 |
No Yes | Teredinibacter turnerae T7901 | | 5 | 5 |
No Yes | Cellvibrio japonicus Ueda107 | | 3 | 3 |
No Yes | Vibrio anguillarum 775 | | 1 | 1 |
No Yes | Photobacterium profundum SS9 | | 1 | 1 |
No Yes | Pseudoalteromonas atlantica T6c | | 1 | 1 |
No Yes | Glaciecola sp. 4H-3-7+YE-5 | | 1 | 1 |
No Yes | Alteromonas sp. SN2 | | 1 | 1 |
No Yes | Alteromonas macleodii str. 'Deep ecotype' | | 1 | 1 |
No Yes | Hahella chejuensis KCTC 2396 | | 4 | 4 |
No Yes | Marinomonas sp. MWYL1 | | 1 | 1 |
No Yes | Pseudoxanthomonas suwonensis 11-1 | | 2 | 2 |
No Yes | Xanthomonas axonopodis pv. citri str. 306 | | 1 | 1 |
No Yes | Xanthomonas albilineans GPE PC73 | | 1 | 1 |
No Yes | Xanthomonas campestris pv. campestris str. B100 | | 1 | 1 |
No Yes | Proteus mirabilis HI4320 | | 1 | 1 |
No Yes | Rahnella sp. Y9602 | | 1 | 1 |
No Yes | Rahnella aquatilis CIP 78.65 = ATCC 33071 | | 1 | 1 |
No Yes | Serratia sp. ATCC 39006 | | 1 | 1 |
No Yes | Dickeya dadantii Ech703 | | 1 | 1 |
No Yes | Dickeya zeae Ech1591 | | 1 | 1 |
No Yes | Pantoea sp. At-9b | | 1 | 1 |
No Yes | Pantoea vagans C9-1 | | 1 | 1 |
No Yes | Pantoea ananatis LMG 20103 | | 1 | 1 |
No Yes | Erwinia tasmaniensis Et1/99 | | 1 | 1 |
No Yes | Erwinia sp. Ejp617 | | 1 | 1 |
No Yes | Erwinia billingiae Eb661 | | 1 | 1 |
No Yes | Erwinia pyrifoliae Ep1/96 | | 1 | 1 |
No Yes | Erwinia amylovora ATCC 49946 | | 1 | 1 |
No Yes | Escherichia blattae DSM 4481 | | 1 | 1 |
No Yes | Klebsiella oxytoca E718 | | 1 | 1 |
No Yes | Klebsiella variicola At-22 | | 2 | 2 |
No Yes | Klebsiella pneumoniae NTUH-K2044 | | 2 | 2 |
No Yes | Enterobacter sp. R4-368 | | 2 | 2 |
No Yes | Enterobacter sp. 638 | | 1 | 1 |
No Yes | Enterobacter asburiae LF7a | | 1 | 1 |
No Yes | Enterobacter cloacae subsp. dissolvens SDM | | 1 | 1 |
No Yes | Azotobacter vinelandii DJ | | 1 | 1 |
No Yes | Pseudomonas syringae pv. tomato str. DC3000 | | 1 | 1 |
No Yes | Halorhabdus utahensis DSM 12940 | | 1 | 1 |
No Yes | Cryptococcus neoformans var. grubii H99 | | 1 | 1 |
No Yes | Cryptococcus neoformans B-3501A | | 1 | 1 |
No Yes | Theobroma cacao Matina 1-6 v0.9 | Cacao | 19 | 18 |
No Yes | Hordeum vulgare 22 | Domesticated barley | 31 | 31 |
No Yes | Oryza sativa ssp. Indica (Subspecies) | Long-grained rice | 28 | 28 |
No Yes | Chamaesiphon minutus PCC 6605 | | 1 | 1 |
No Yes | Synechocystis sp. PCC 6803 substr. PCC-P | | 1 | 1 |
No Yes | Synechocystis sp. PCC 6803 substr. PCC-N | | 1 | 1 |
No Yes | Synechocystis sp. PCC 6803 substr. GT-I | | 1 | 1 |
No Yes | Synechocystis sp. PCC 6803 | | 1 | 1 |
No Yes | Cyanobium gracile PCC 6307 | | 1 | 1 |
No Yes | Stanieria cyanosphaera PCC 7437 | | 2 | 2 |
No Yes | Anabaena cylindrica PCC 7122 | | 1 | 1 |
No Yes | Streptomyces rapamycinicus NRRL 5491 | | 4 | 4 |
No Yes | Streptomyces davawensis JCM 4913 | | 2 | 2 |
No Yes | Streptomyces venezuelae ATCC 10712 | | 2 | 2 |
No Yes | Streptomyces collinus Tu 365 | | 1 | 1 |
No Yes | Streptomyces hygroscopicus subsp. jinggangensis TL01 | | 1 | 1 |
No Yes | Amycolatopsis mediterranei RB | | 5 | 5 |
No Yes | Amycolatopsis mediterranei S699 | | 5 | 5 |
No Yes | Amycolatopsis mediterranei S699 | | 5 | 5 |
No Yes | Amycolatopsis orientalis HCCB10007 | | 1 | 1 |
No Yes | Actinoplanes friuliensis DSM 7358 | | 2 | 2 |
No Yes | Clostridium thermocellum DSM 1313 | | 19 | 19 |
No Yes | [Clostridium] stercorarium Clostridiu subsp. stercorarium DSM 8532 | | 2 | 2 |
No Yes | Ruminococcus champanellensis 18P13 | | 9 | 9 |
No Yes | Roseburia intestinalis XB6B4 | | 1 | 1 |
No Yes | Clostridium saccharobutylicum DSM 13864 | | 1 | 1 |
No Yes | Clostridium saccharoperbutylacetonicum N1-4(HMT) | | 6 | 6 |
No Yes | Clostridium acetobutylicum DSM 1731 | | 5 | 5 |
No Yes | Clostridium acetobutylicum EA 2018 | | 5 | 5 |
No Yes | Lactobacillus johnsonii N6.2 | | 1 | 1 |
No Yes | Lactobacillus johnsonii DPC 6026 | | 1 | 1 |
No Yes | Lactobacillus johnsonii NCC 533 | | 1 | 1 |
No Yes | Lactobacillus amylovorus GRL 1112 | | 1 | 1 |
No Yes | Lactobacillus reuteri TD1 | | 1 | 1 |
No Yes | Lactobacillus reuteri I5007 | | 1 | 1 |
No Yes | Lactobacillus reuteri JCM 1112 | | 1 | 1 |
No Yes | Lactobacillus helveticus R0052 | | 1 | 1 |
No Yes | Lactobacillus brevis KB290 | | 1 | 1 |
No Yes | Lactobacillus acidophilus La-14 | | 1 | 1 |
No Yes | Lactobacillus acidophilus NCFM | | 1 | 1 |
No Yes | Lactococcus lactis subsp. lactis KLDS 4.0325 | | 1 | 1 |
No Yes | Lactococcus lactis subsp. lactis IO-1 | | 2 | 2 |
No Yes | Lactococcus lactis subsp. lactis KF147 | | 2 | 2 |
No Yes | Lactococcus lactis subsp. cremoris KW2 | | 1 | 1 |
No Yes | Lactococcus lactis subsp. cremoris UC509.9 | | 1 | 1 |
No Yes | Lactococcus lactis subsp. cremoris NZ9000 | | 1 | 1 |
No Yes | Lactococcus lactis subsp. cremoris SK11 | | 1 | 1 |
No Yes | Streptococcus anginosus C238 | | 1 | 1 |
No Yes | Streptococcus anginosus C1051 | | 1 | 1 |
No Yes | Streptococcus parasanguinis FW213 | | 1 | 1 |
No Yes | Streptococcus mutans GS-5 | | 1 | 1 |
No Yes | Streptococcus mutans LJ23 | | 1 | 1 |
No Yes | Streptococcus salivarius CCHSS3 | | 1 | 1 |
No Yes | Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1 | | 1 | 1 |
No Yes | Thermobacillus composti KWC4 | | 2 | 2 |
No Yes | Paenibacillus sp. Y412MC10 | | 1 | 1 |
No Yes | Paenibacillus mucilaginosus KNP414 | | 5 | 5 |
No Yes | Paenibacillus mucilaginosus K02 | | 5 | 5 |
No Yes | Paenibacillus polymyxa SC2 | | 1 | 1 |
No Yes | Paenibacillus polymyxa E681 | | 1 | 1 |
No Yes | Amphibacillus xylanus NBRC 15112 | | 2 | 2 |
No Yes | Bacillus licheniformis 9945A | | 3 | 3 |
No Yes | Bacillus licheniformis DSM 13 = ATCC 14580 | | 2 | 2 |
No Yes | Bacillus thuringiensis HD-771 | | 1 | 1 |
No Yes | Bacillus thuringiensis HD-789 | | 1 | 1 |
No Yes | Bacillus thuringiensis MC28 | | 1 | 1 |
No Yes | Bacillus thuringiensis serovar chinensis CT-43 | | 1 | 1 |
No Yes | Bacillus thuringiensis Bt407 | | 1 | 1 |
No Yes | Bacillus thuringiensis serovar kurstaki str. HD73 | | 1 | 1 |
No Yes | Bacillus thuringiensis BMB171 | | 1 | 1 |
No Yes | Bacillus thuringiensis serovar thuringiensis str. IS5056 | | 1 | 1 |
No Yes | Bacillus cereus AH820 | | 1 | 1 |
No Yes | Bacillus cereus B4264 | | 1 | 1 |
No Yes | Bacillus cereus G9842 | | 1 | 1 |
No Yes | Bacillus cereus E33L | | 2 | 2 |
No Yes | Bacillus cereus ATCC 14579 | | 1 | 1 |
No Yes | Bacillus cereus ATCC 10987 | | 1 | 1 |
No Yes | Bacillus anthracis str. H9401 | | 1 | 1 |
No Yes | Bacillus anthracis str. CDC 684 | | 1 | 1 |
No Yes | Bacillus anthracis str. 'Ames Ancestor' | | 1 | 1 |
No Yes | Bacillus anthracis str. Sterne | | 1 | 1 |
No Yes | Bacillus anthracis str. Ames | | 1 | 1 |
No Yes | Echinicola vietnamensis DSM 17526 | | 1 | 1 |
No Yes | Fibrobacter succinogenes subsp. succinogenes S85 | | 11 | 11 |
No Yes | Spirochaeta thermophila DSM 6578 | | 3 | 3 |
No Yes | Desulfocapsa sulfexigens DSM 10523 | | 1 | 1 |
No Yes | Sorangium cellulosum So0157-2 | | 5 | 5 |
No Yes | Anaeromyxobacter sp. K | | 1 | 1 |
No Yes | Anaeromyxobacter dehalogenans 2CP-C | | 1 | 1 |
No Yes | Burkholderia sp. YI23 | | 1 | 1 |
No Yes | Burkholderia pseudomallei MSHR305 | | 1 | 1 |
No Yes | Burkholderia pseudomallei NCTC 13179 | | 1 | 1 |
No Yes | Burkholderia pseudomallei BPC006 | | 1 | 1 |
No Yes | Burkholderia pseudomallei 1026b | | 1 | 1 |
No Yes | Burkholderia pseudomallei 668 | | 1 | 1 |
No Yes | Burkholderia pseudomallei 1710b | | 1 | 1 |
No Yes | Burkholderia pseudomallei K96243 | | 1 | 1 |
No Yes | Burkholderia mallei NCTC 10229 | | 1 | 1 |
No Yes | Burkholderia mallei NCTC 10247 | | 1 | 1 |
No Yes | Burkholderia mallei ATCC 23344 | | 1 | 1 |
No Yes | Caulobacter crescentus CB15 | | 1 | 1 |
No Yes | Zymomonas mobilis subsp. mobilis ATCC 29191 | | 1 | 1 |
No Yes | Zymomonas mobilis subsp. mobilis CP4 | | 1 | 1 |
No Yes | Zymomonas mobilis subsp. mobilis ATCC 10988 | | 1 | 1 |
No Yes | Zymomonas mobilis subsp. mobilis ZM4 | | 1 | 1 |
No Yes | Zymomonas mobilis subsp. pomaceae ATCC 29192 | | 1 | 1 |
No Yes | Rhodobacter sphaeroides KD131 | | 1 | 1 |
No Yes | Rhodobacter sphaeroides ATCC 17025 | | 2 | 2 |
No Yes | Methylobacterium extorquens DM4 | | 1 | 1 |
No Yes | Methylobacterium extorquens PA1 | | 1 | 1 |
No Yes | Sinorhizobium fredii USDA 257 | | 1 | 1 |
No Yes | Sinorhizobium fredii HH103 | | 1 | 1 |
No Yes | Sinorhizobium meliloti GR4 | | 1 | 1 |
No Yes | Rhizobium etli CFN 42 | | 1 | 1 |
No Yes | Rhizobium etli bv. mimosae str. Mim1 | | 1 | 1 |
No Yes | Rhizobium tropici CIAT 899 | | 1 | 1 |
No Yes | Rhizobium leguminosarum bv. trifolii WSM2304 | | 1 | 1 |
No Yes | Rhizobium leguminosarum bv. trifolii WSM1325 | | 1 | 1 |
No Yes | Simiduia agarivorans SA1 = DSM 21679 | | 2 | 2 |
No Yes | Vibrio anguillarum Listonella anguillarum M3 | | 1 | 1 |
No Yes | Vibrio nigripulchritudo VibrioScope | | 1 | 1 |
No Yes | Alteromonas macleodii str. 'Ionian Sea UM4b' | | 1 | 1 |
No Yes | Alteromonas macleodii str. 'Ionian Sea UM7' | | 1 | 1 |
No Yes | Alteromonas macleodii str. 'Ionian Sea U8' | | 1 | 1 |
No Yes | Alteromonas macleodii str. 'Ionian Sea U7' | | 1 | 1 |
No Yes | Alteromonas macleodii str. 'Ionian Sea U4' | | 1 | 1 |
No Yes | Alteromonas macleodii str. 'Aegean Sea MED64' | | 1 | 1 |
No Yes | Alteromonas macleodii str. 'English Channel 615' | | 1 | 1 |
No Yes | Alteromonas macleodii AltDE1 | | 1 | 1 |
No Yes | Alteromonas macleodii str. 'English Channel 673' | | 1 | 1 |
No Yes | Alteromonas macleodii str. 'Balearic Sea AD45' | | 1 | 1 |
No Yes | Alteromonas macleodii str. 'Black Sea 11' | | 1 | 1 |
No Yes | Alteromonas macleodii ATCC 27126 | | 1 | 1 |
No Yes | Xanthomonas citri subsp. citri Aw12879 | | 1 | 1 |
No Yes | Xanthomonas campestris pv. vesicatoria str. 85-10 | | 1 | 1 |
No Yes | Xanthomonas axonopodis pv. citrumelo F1 | | 1 | 1 |
No Yes | Xanthomonas axonopodis Xac29-1 | | 1 | 1 |
No Yes | Xanthomonas campestris pv. raphani 756C | | 1 | 1 |
No Yes | Xanthomonas campestris pv. campestris str. 8004 | | 1 | 1 |
No Yes | Xanthomonas campestris pv. campestris str. ATCC 33913 | | 1 | 1 |
No Yes | Proteus mirabilis BB2000 | | 1 | 1 |
No Yes | Rahnella aquatilis HX2 | | 1 | 1 |
No Yes | Dickeya dadantii Ech586 | | 1 | 1 |
No Yes | Dickeya dadantii 3937 | | 1 | 1 |
No Yes | Pantoea ananatis LMG 5342 | | 1 | 1 |
No Yes | Pantoea ananatis PA13 | | 1 | 1 |
No Yes | Pantoea ananatis AJ13355 | | 1 | 1 |
No Yes | Erwinia pyrifoliae DSM 12163 | | 1 | 1 |
No Yes | Erwinia amylovora CFBP1430 | | 1 | 1 |
No Yes | Raoultella ornithinolytica B6 | | 1 | 1 |
No Yes | Klebsiella oxytoca KCTC 1686 | | 1 | 1 |
No Yes | Klebsiella pneumoniae JM45 | | 2 | 2 |
No Yes | Klebsiella pneumoniae CG43 | | 2 | 2 |
No Yes | Klebsiella pneumoniae KCTC 2242 | | 2 | 2 |
No Yes | Klebsiella pneumoniae 342 | | 3 | 3 |
No Yes | Klebsiella pneumoniae subsp. pneumoniae 1084 | | 2 | 2 |
No Yes | Klebsiella pneumoniae subsp. pneumoniae HS11286 | | 2 | 2 |
No Yes | Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | | 2 | 2 |
No Yes | Klebsiella pneumoniae subsp. rhinoscleromatis SB3432 | | 2 | 2 |
No Yes | Escherichia coli LY180 | | 1 | 1 |
No Yes | Enterobacter cloacae EcWSU1 | | 1 | 1 |
No Yes | Enterobacter cloacae subsp. cloacae ENHKU01 | | 1 | 1 |
No Yes | Azotobacter vinelandii CA6 | | 1 | 1 |
No Yes | Azotobacter vinelandii CA | | 1 | 1 |
No Yes | Halorhabdus tiamatea SARL4B | | 1 | 1 |
No Yes | Picea sitchensis (Incomplete) | Sitka spruce | 2 | 2 |
No Yes | Lotus japonicus (Early assembly) | | 17 | 17 |
No Yes | Malus x domestica (Duplicate) | Apple | 28 | 28 |
No Yes | Ricinus communis (Early assembly) | Castor bean | 19 | 19 |
No Yes | Nicotiana benthamiana 0.4.4 (Early draft) | | 34 | 33 |
No Yes | Solanum pimpinellifolium A-1.0 (Early draft) | Currant tomato | 20 | 20 |
No Yes | Solanum lycopersicum v2.3 (Early assembly) | Tomato | 20 | 20 |
No Yes | Phoenix dactylifera (Early draft) | Date palm | 18 | 17 |
No Yes | Ciona savignyi 69_2.0 | Pacific transparent sea squirt | 10 | 8 |
No Yes | Ciona intestinalis 69 | Vase tunicate | 8 | 8 |
No Yes | Arabidopsis thaliana 10 | Thale cress | 25 | 25 |
No Yes | Air microbial communities Singapore indoor air filters 1 (meta-genome) | | 1 | 1 |
No Yes | Air microbial communities Singapore indoor air filters 2 (meta-genome) | | 4 | 4 |
No Yes | Atta cephalotes fungus garden (ACEF) (meta-genome) | | 1 | 1 |
No Yes | Combined (meta-genome) | | 1 | 1 |
No Yes | Cyphomyrmex longiscapus fungus garden (meta-genome) | | 7 | 7 |
No Yes | Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome) | | 3 | 3 |
No Yes | Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome) | | 3 | 3 |
No Yes | Dump bottom (Dump bottom) (meta-genome) | | 10 | 10 |
No Yes | Dump top (Dump top) (meta-genome) | | 6 | 6 |
No Yes | Endophytic microbiome from Rice (meta-genome) | | 3 | 3 |
No Yes | Freshwater propionate enrichment of Brocadia fulgida (meta-genome) | | 1 | 1 |
No Yes | Fungus garden combined (combined) (meta-genome) | | 2 | 2 |
No Yes | Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome) | | 5 | 5 |
No Yes | Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome) | | 2 | 2 |
No Yes | Hindgut microbiome of Nasutitermes sp. (Costa Rica) (meta-genome) | | 29 | 29 |
No Yes | Hot spring microbial community from Yellowstone Hot Springs, sample YNP10 from Narrow Gauge (meta-genome) | | 1 | 1 |
No Yes | Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome) | | 2 | 2 |
No Yes | Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime (meta-genome) | | 3 | 3 |
No Yes | Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome) | | 1 | 1 |
No Yes | Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome) | | 2 | 2 |
No Yes | Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome) | | 3 | 3 |
No Yes | Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome) | | 1 | 1 |
No Yes | Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome) | | 1 | 1 |
No Yes | Human Gut Community Subject 7 (meta-genome) | | 2 | 2 |
No Yes | Human Gut Community Subject 8 (meta-genome) | | 1 | 1 |
No Yes | Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome) | | 3 | 3 |
No Yes | Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome) | | 2 | 2 |
No Yes | Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome) | | 5 | 5 |
No Yes | Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome) | | 2 | 2 |
No Yes | Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome) | | 2 | 2 |
No Yes | Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome) | | 3 | 3 |
No Yes | Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome) | | 1 | 1 |
No Yes | NCBI 2017_08 genome | | 19256 | 19220 |
No Yes | Oak Ridge Pristine Groundwater FRC FW301 (meta-genome) | | 2 | 2 |
No Yes | simHC - Simulated High Complexity Metagenome (meta-genome) | | 13 | 13 |
No Yes | simLC - Simulated Low Complexity Metagenome (meta-genome) | | 14 | 14 |
No Yes | simMC - Simulated Medium Complexity Metagenome (meta-genome) | | 6 | 6 |
No Yes | Sludge/Australian, Phrap Assembly (meta-genome) | | 1 | 1 |
No Yes | Soil microbial communities from Minnesota Farm (meta-genome) | | 4 | 4 |
No Yes | Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome) | | 17 | 17 |
No Yes | Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome) | | 26 | 26 |
No Yes | Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome) | | 11 | 11 |
No Yes | Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome) | | 13 | 13 |
No Yes | Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome) | | 5 | 5 |
No Yes | Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome) | | 3 | 3 |
No Yes | STRING v9.0.5 (STRING) | | 500 | 494 |
No Yes | Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome) | | 4 | 4 |
No Yes | Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome) | | 1 | 1 |
No Yes | Uniprot 2018_03 genome | | 11444 | 11386 |
No Yes | Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome) | | 1 | 1 |
No Yes | Global Ocean Sampling Expedition (GOS) | | 17 | 17 |
No Yes | NCBI plasmid sequences (Plasmids) | | 13 | 13 |
No Yes | NCBI viral sequences (Viral) | | 1 | 1 |
No Yes | PDB chains (SCOP 1.75) (PDB) | | 22 | 22 |
No Yes | Protein Data Bank (all PDB sequenc) | | 96 | 96 |
No Yes | SCOP2 SCOPe CATH ECOD (all domain sequ) | | 351 | 351 |
No Yes | TargetDB (Targets) | | 6 | 6 |