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Chondroitin AC/alginate lyase superfamily domain assignments


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Select to display   Genome       Domains   Proteins
No Yes ALL   82446 82446
No Yes Homo sapiens 76_38 Human 3 3
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 1 1
No Yes Gorilla gorilla 76_3.1 Western gorilla 1 1
No Yes Pongo abelii 76_2 Sumatran orangutan 1 1
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 1 1
No Yes Papio anubis 76 Olive baboon 1 1
No Yes Macaca mulatta 76_1 Rhesus monkey 2 2
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 3 3
No Yes Otolemur garnettii 76_3 Small-eared galago 1 1
No Yes Microcebus murinus 76_1 Gray mouse lemur 1 1
No Yes Rattus norvegicus 76_5.0 Norway rat 2 2
No Yes Mus musculus 76_38 House mouse 2 2
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 2 2
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 1 1
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 1 1
No Yes Cavia porcellus 76_3 Domestic guinea pig 1 1
No Yes Oryctolagus cuniculus 76_2 Rabbit 2 2
No Yes Sus scrofa 76_10.2 Pig 1 1
No Yes Bos taurus 76_3.1 Cattle 2 2
No Yes Ovis aries 76_3.1 Sheep 1 1
No Yes Vicugna pacos 76_1 Alpaca 1 1
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 1 1
No Yes Mustela putorius furo 76_1.0 Domestic ferret 1 1
No Yes Ailuropoda melanoleuca 76_1 Giant panda 1 1
No Yes Canis familiaris 76_3.1 Dog 2 2
No Yes Felis catus 76_6.2 Domestic cat 2 2
No Yes Equus caballus 76_2 Horse 1 1
No Yes Myotis lucifugus 76_2.0 Little brown bat 2 2
No Yes Pteropus vampyrus 76_1 Large flying fox 1 1
No Yes Sorex araneus 76_1 European shrew 1 1
No Yes Erinaceus europaeus 76 Western European hedgehog 1 1
No Yes Procavia capensis 76_1 Cape rock hyrax 1 1
No Yes Loxodonta africana 76_3 African savanna elephant 1 1
No Yes Echinops telfairi 76 Small Madagascar hedgehog 1 1
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 1 1
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 1 1
No Yes Macropus eugenii 76_1.0 Tammar wallaby 1 1
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 2 2
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 1 1
No Yes Ornithorhynchus anatinus 76_5 Platypus 3 3
No Yes Petromyzon marinus 76_7.0 Sea lamprey 1 1
No Yes Meleagris gallopavo 76_2 Turkey 2 2
No Yes Gallus gallus 76_4 Chicken 2 2
No Yes Anas platyrhynchos 76_1.0 Mallard 2 2
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 1 1
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 2 2
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 2 2
No Yes Anolis carolinensis 76_2.0 Green anole 2 2
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 2 2
No Yes Latimeria chalumnae 76_1 Coelacanth 2 2
No Yes Lepisosteus oculatus 76 Spotted gar 2 2
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 2 2
No Yes Takifugu rubripes 76_4 Torafugu 2 2
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 1 1
No Yes Oryzias latipes 76_1 Japanese medaka 4 4
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 1 1
No Yes Poecilia formosa 76 Amazon molly 3 3
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 2 2
No Yes Astyanax mexicanus 76 Mexican tetra 1 1
No Yes Danio rerio 76_9 Zebrafish 4 4
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 1 1
No Yes Ciona intestinalis 76 Vase tunicate 2 2
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 1 1
No Yes Adineta vaga   13 13
No Yes Meloidogyne incognita Southern root-knot nematode 2 2
No Yes Meloidogyne hapla   1 1
No Yes Acropora digitifera v1.0   1 1
No Yes Nematostella vectensis 1.0 Starlet sea anemone 5 5
No Yes Proterospongia sp. ATCC 50818   3 3
No Yes Monosiga brevicollis   4 4
No Yes Sphaeroforma arctica JP610   17 17
No Yes Mortierella verticillata NRRL 6337   3 3
No Yes Phycomyces blakesleeanus   3 3
No Yes Rhizopus oryzae RA 99-880   2 2
No Yes Mucor circinelloides   2 2
No Yes Rhizomucor miehei CAU432   1 1
No Yes Malassezia globosa CBS 7966   2 2
No Yes Sporisorium reilianum 22   1 1
No Yes Ustilago maydis   1 1
No Yes Mixia osmundae IAM 14324 v1.0   2 2
No Yes Cronartium quercuum f. sp. fusiforme G11 v1.0   1 1
No Yes Puccinia graminis f. sp. tritici CRL 75-36-700-3   1 1
No Yes Melampsora laricis-populina   2 2
No Yes Rhodotorula graminis WP1 v1.0   1 1
No Yes Sporobolomyces roseus IAM 13481   1 1
No Yes Microbotryum violaceum 22   2 2
No Yes Wallemia sebi v1.0   1 1
No Yes Sphaerobolus stellatus v1.0   5 5
No Yes Piloderma croceum F 1598 v1.0   9 9
No Yes Serpula lacrymans var. lacrymans S7.9   3 3
No Yes Coniophora puteana   3 3
No Yes Hydnomerulius pinastri v2.0   4 4
No Yes Paxillus rubicundulus Ve08.2h10 v1.0   3 3
No Yes Pisolithus microcarpus 441 v1.0   2 2
No Yes Pisolithus tinctorius Marx 270 v1.0   2 2
No Yes Scleroderma citrinum Foug A v1.0   2 2
No Yes Coprinopsis cinerea okayama7 130 v3   6 6
No Yes Pleurotus ostreatus Oyster mushroom 7 7
No Yes Amanita thiersii Skay4041 v1.0   4 4
No Yes Amanita muscaria Koide v1.0 Fly agaric 5 5
No Yes Galerina marginata v1.0   5 5
No Yes Hebeloma cylindrosporum h7 v2.0   3 3
No Yes Laccaria bicolor S238N-H82   3 3
No Yes Agaricus bisporus var. bisporus   3 3
No Yes Schizophyllum commune   3 3
No Yes Stereum hirsutum FP-91666 SS1 v1.0   6 6
No Yes Heterobasidion annosum   4 4
No Yes Gloeophyllum trabeumv1.0   3 3
No Yes Punctularia strigosozonata v1.0   4 4
No Yes Sebacina vermifera MAFF 305830 v1.0   5 5
No Yes Fomitiporia mediterranea v1.0   3 3
No Yes Tulasnella calospora AL13/4D v1.0   12 11
No Yes Postia placenta   4 4
No Yes Wolfiporia cocos MD-104 SS10 v1.0   2 2
No Yes Fomitopsis pinicolav1.0   2 2
No Yes Fomitopsis pinicola FP-58527 SS1 v3.0   2 2
No Yes Phanerochaete chrysosporium RP-78 2.1   4 4
No Yes Dichomitus squalens   7 7
No Yes Trametes versicolor v1.0   6 6
No Yes Tremella mesenterica Witches' butter 3 3
No Yes Daldinia eschscholzii EC12 v1.0   1 1
No Yes Podospora anserina   1 1
No Yes Cryphonectria parasitica Chestnut blight fungus 1 1
No Yes Verticillium albo-atrum VaMs.102   4 4
No Yes Verticillium dahliae VdLs.17   4 4
No Yes Fusarium graminearum   1 1
No Yes Nectria haematococca mpVI   6 6
No Yes Fusarium oxysporum f. sp. lycopersici 4286   5 5
No Yes Fusarium verticillioides 7600   2 2
No Yes Trichoderma asperellum CBS 433.97 v1.0   3 3
No Yes Trichoderma atroviride   5 5
No Yes Trichoderma citrinoviride v1.0   2 2
No Yes Trichoderma reesei 1.2   2 2
No Yes Trichoderma virens Gv29-8   5 5
No Yes Trichoderma longibrachiatum ATCC 18648 v1.0   3 3
No Yes Trichoderma harzianum CBS 226.95 v1.0   6 6
No Yes Botrytis cinerea B05.10   2 2
No Yes Didymella exigua CBS 183.55 v1.0   1 1
No Yes Leptosphaeria maculans 22   1 1
No Yes Aspergillus zonatus v1.0   4 4
No Yes Penicillium chrysogenum Wisconsin 54-1255   2 2
No Yes Penicillium chrysogenum v1.0   2 2
No Yes Aspergillus acidus v1.0   2 2
No Yes Aspergillus fumigatus Af293   4 4
No Yes Aspergillus brasiliensis v1.0   2 2
No Yes Aspergillus nidulans FGSC A4   2 2
No Yes Aspergillus sydowii v1.0   2 2
No Yes Aspergillus versicolor v1.0   3 3
No Yes Neosartorya fischeri NRRL 181   4 4
No Yes Aspergillus terreus NIH2624   2 2
No Yes Aspergillus tubingensis v1.0   2 2
No Yes Aspergillus wentii v1.0   1 1
No Yes Aspergillus oryzae RIB40   4 4
No Yes Aspergillus niger 22   2 2
No Yes Aspergillus niger ATCC 1015   2 2
No Yes Aspergillus flavus NRRL3357   4 4
No Yes Penicillium marneffei ATCC 18224   1 1
No Yes Tuber melanosporum Mel28 22   1 1
No Yes Tuber melanosporum Vittad Perigord truffle 1 1
No Yes Spizellomyces punctatus DAOM BR117   1 1
No Yes Micromonas sp. RCC299   1 1
No Yes Porphyridium purpureum 02_2012   1 1
No Yes Giardia lamblia 2.3   3 3
No Yes Pythium iwayamai DAOM BR242034 22   2 2
No Yes Pythium arrhenomanes ATCC 12531 22   1 1
No Yes Pythium ultimum v1.7-2   1 1
No Yes Pythium irregulare DAOM BR486 22   3 3
No Yes Pythium vexans DAOM BR484 22   1 1
No Yes Phytophthora sojae 1.1   1 1
No Yes Phytophthora capsici   3 3
No Yes Phaeodactylum tricornutumCCAP 1055/1   8 8
No Yes Naegleria gruberi   1 1
No Yes Trichomonas vaginalis   4 4
No Yes Acaryochloris marina MBIC11017   1 1
No Yes Cyanothece sp. PCC 8802   1 1
No Yes Gloeobacter violaceus PCC 7421   2 2
No Yes Mycoplasma crocodyli MP145   1 1
No Yes Mycoplasma fermentans M64   1 1
No Yes Eggerthella sp. YY7918   1 1
No Yes Thermobispora bispora DSM 43833   1 1
No Yes Catenulispora acidiphila DSM 44928   4 4
No Yes Stackebrandtia nassauensis DSM 44728   2 2
No Yes Frankia symbiont of Datisca glomerata   1 1
No Yes Frankia sp. EAN1pec   1 1
No Yes Frankia alni ACN14a   1 1
No Yes Streptosporangium roseum DSM 43021   6 6
No Yes Kitasatospora setae KM-6054   1 1
No Yes Streptomyces coelicolor A3(2)   5 5
No Yes Streptomyces sp. PAMC26508   2 2
No Yes Streptomyces flavogriseus ATCC 33331   2 2
No Yes Streptomyces sp. SirexAA-E   1 1
No Yes Streptomyces griseus subsp. griseus NBRC 13350   2 2
No Yes Streptomyces bingchenggensis BCW-1   10 10
No Yes Streptomyces violaceusniger Tu 4113   8 8
No Yes Streptomyces avermitilis MA-4680   4 4
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488   1 1
No Yes Streptomyces scabiei 87.22   3 3
No Yes Streptomyces hygroscopicus subsp. jinggangensis 5008   4 4
No Yes Actinosynnema mirum DSM 43827   1 1
No Yes Pseudonocardia dioxanivorans CB1190   1 1
No Yes Amycolatopsis mediterranei U32   6 6
No Yes Kribbella flavida DSM 17836   2 2
No Yes Propionibacterium acnes SK137   1 1
No Yes Rhodococcus opacus B4   1 1
No Yes Sanguibacter keddieii DSM 10542   1 1
No Yes Beutenbergia cavernae DSM 12333   7 7
No Yes Microbacterium testaceum StLB037   2 2
No Yes Intrasporangium calvum DSM 43043   1 1
No Yes Brachybacterium faecium DSM 4810   1 1
No Yes Arthrobacter chlorophenolicus A6   1 1
No Yes Arthrobacter aurescens TC1   1 1
No Yes Arthrobacter arilaitensis Re117   1 1
No Yes Arthrobacter sp. Rue61a   2 2
No Yes Arthrobacter sp. FB24   1 1
No Yes Anaerolinea thermophila UNI-1   2 2
No Yes Erysipelothrix rhusiopathiae str. Fujisawa   4 4
No Yes Natranaerobius thermophilus JW/NM-WN-LF   1 1
No Yes Clostridium saccharolyticum WM1   6 6
No Yes Clostridium phytofermentans ISDg   4 4
No Yes Roseburia hominis A2-183   1 1
No Yes Alkaliphilus metalliredigens QYMF   1 1
No Yes Clostridium novyi NT   1 1
No Yes Clostridium perfringens ATCC 13124   3 3
No Yes Clostridium cellulovorans 743B   1 1
No Yes Mahella australiensis 50-1 BON   1 1
No Yes Caldicellulosiruptor saccharolyticus DSM 8903   2 2
No Yes Melissococcus plutonius DAT561   1 1
No Yes Enterococcus sp. 7L76   1 1
No Yes Enterococcus hirae ATCC 9790   1 1
No Yes Enterococcus faecalis 62   2 2
No Yes Lactobacillus casei ATCC 334   2 2
No Yes Lactobacillus rhamnosus Lc 705   2 2
No Yes Streptococcus intermedius JTH08   2 2
No Yes Streptococcus dysgalactiae subsp. equisimilis GGS_124   2 2
No Yes Streptococcus parauberis KCTC 11537   1 1
No Yes Streptococcus pyogenes str. Manfredo   1 1
No Yes Streptococcus pneumoniae P1031   2 2
No Yes Streptococcus agalactiae A909   1 1
No Yes Streptococcus suis P1/7   1 1
No Yes Exiguobacterium sp. AT1b   3 3
No Yes Paenibacillus sp. JDR-2   8 8
No Yes Paenibacillus terrae HPL-003   2 2
No Yes Paenibacillus mucilaginosus 3016   10 10
No Yes Paenibacillus polymyxa M1   2 2
No Yes Bacillus selenitireducens MLS10   2 2
No Yes Halobacillus halophilus DSM 2266   1 1
No Yes Bacillus anthracis str. A0248   1 1
No Yes Bacillus cellulosilyticus DSM 2522   1 1
No Yes Staphylococcus aureus subsp. aureus JH1   1 1
No Yes Staphylococcus aureus   1 1
No Yes Gemmatimonas aurantiaca T-27   1 1
No Yes Melioribacter roseus P3M   4 4
No Yes Chloroherpeton thalassium ATCC 35110   3 3
No Yes Prosthecochloris aestuarii DSM 271   2 1
No Yes Haliscomenobacter hydrossis DSM 1100   4 4
No Yes Niastella koreensis GR20-10   11 11
No Yes Chitinophaga pinensis DSM 2588   5 5
No Yes Rhodothermus marinus DSM 4252   2 2
No Yes Cyclobacterium marinum DSM 745   13 12
No Yes Fibrella aestuarina   5 5
No Yes Leadbetterella byssophila DSM 17132   1 1
No Yes Dyadobacter fermentans DSM 18053   4 4
No Yes Spirosoma linguale DSM 74   5 5
No Yes Runella slithyformis DSM 19594   6 6
No Yes Parabacteroides distasonis ATCC 8503   1 1
No Yes Tannerella forsythia ATCC 43037   2 2
No Yes Prevotella ruminicola 23   1 1
No Yes Bacteroides helcogenes P 36-108   7 7
No Yes Bacteroides vulgatus ATCC 8482   3 3
No Yes Bacteroides thetaiotaomicron VPI-5482   11 11
No Yes Bacteroides fragilis YCH46   2 2
No Yes Pedobacter saltans DSM 12145   19 19
No Yes Pedobacter heparinus DSM 2366   22 22
No Yes Sphingobacterium sp. 21   3 3
No Yes Owenweeksia hongkongensis DSM 17368   2 2
No Yes Krokinobacter sp. 4H-3-7-5   2 2
No Yes Gramella forsetii KT0803   1 1
No Yes Lacinutrix sp. 5H-3-7-4   1 1
No Yes Croceibacter atlanticus HTCC2559   1 1
No Yes Zobellia galactanivorans   5 5
No Yes Cellulophaga algicola DSM 14237   2 2
No Yes Cellulophaga lytica DSM 7489   1 1
No Yes Polaribacter sp. MED152   1 1
No Yes Ornithobacterium rhinotracheale DSM 15997   3 3
No Yes Capnocytophaga ochracea DSM 7271   1 1
No Yes Flavobacterium branchiophilum FL-15   1 1
No Yes Flavobacterium columnare ATCC 49512   2 2
No Yes Phycisphaera mikurensis NBRC 102666   2 2
No Yes Coraliomargarita akajimensis DSM 45221   2 2
No Yes Opitutus terrae PB90-1   2 2
No Yes Akkermansia muciniphila ATCC BAA-835   1 1
No Yes Sphaerochaeta pleomorpha str. Grapes   1 1
No Yes Sphaerochaeta globus str. Buddy   2 2
No Yes Sphaerochaeta coccoides DSM 17374   3 3
No Yes Treponema brennaborense DSM 12168   3 3
No Yes Candidatus Solibacter usitatus Ellin6076   8 8
No Yes Granulicella tundricola MP5ACTX9   3 3
No Yes Granulicella mallensis MP5ACTX8   8 8
No Yes Candidatus Koribacter versatilis Ellin345   1 1
No Yes Terriglobus saanensis SP1PR4   4 4
No Yes Terriglobus roseus DSM 18391   2 2
No Yes Candidatus Nitrospira defluvii   2 2
No Yes Streptobacillus moniliformis DSM 12112   3 3
No Yes Ilyobacter polytropus DSM 2926   2 2
No Yes Bacteriovorax marinus SJ   1 1
No Yes Helicobacter bizzozeronii CIII-1   2 2
No Yes Helicobacter felis ATCC 49179   3 3
No Yes Helicobacter acinonychis str. Sheeba   1 1
No Yes Helicobacter pylori B38   1 1
No Yes Desulfarculus baarsii DSM 2075   1 1
No Yes Desulfobacca acetoxidans DSM 11109   2 2
No Yes Syntrophus aciditrophicus SB   2 2
No Yes Desulfomonile tiedjei DSM 6799   4 4
No Yes Syntrophobacter fumaroxidans MPOB   1 1
No Yes Desulfurivibrio alkaliphilus AHT2   1 1
No Yes Desulfatibacillum alkenivorans AK-01   1 1
No Yes Desulfohalobium retbaense DSM 5692   1 1
No Yes Desulfovibrio aespoeensis Aspo-2   2 2
No Yes Desulfovibrio salexigens DSM 2638   2 2
No Yes Geobacter metallireducens GS-15   1 1
No Yes Sorangium cellulosum 'So ce 56'   4 4
No Yes Anaeromyxobacter sp. Fw109-5   1 1
No Yes Anaeromyxobacter dehalogenans 2CP-1   1 1
No Yes Stigmatella aurantiaca DW4/3-1   1 1
No Yes Corallococcus coralloides DSM 2259   2 2
No Yes Myxococcus xanthus DK 1622   1 1
No Yes Myxococcus fulvus HW-1   1 1
No Yes Thauera sp. MZ1T   1 1
No Yes Candidatus Accumulibacter phosphatis clade IIA str. UW-1   2 2
No Yes Burkholderia rhizoxinica HKI 454   1 1
No Yes Burkholderia phytofirmans PsJN   1 1
No Yes Burkholderia phymatum STM815   1 1
No Yes Burkholderia xenovorans LB400   1 1
No Yes Ralstonia pickettii 12D   2 2
No Yes Ralstonia solanacearum CFBP2957   2 2
No Yes Burkholderia sp. RPE64   1 1
No Yes Burkholderia sp. CCGE1002   1 1
No Yes Burkholderia thailandensis E264   1 1
No Yes Burkholderia pseudomallei 1106a   1 1
No Yes Burkholderia mallei SAVP1   1 1
No Yes Burkholderia ambifaria AMMD   2 2
No Yes Burkholderia cenocepacia HI2424   2 2
No Yes Burkholderia multivorans ATCC 17616   1 1
No Yes Burkholderia vietnamiensis G4   1 1
No Yes Burkholderia gladioli BSR3   1 1
No Yes Burkholderia glumae BGR1   1 1
No Yes Variovorax paradoxus S110   1 1
No Yes Rhodoferax ferrireducens T118   1 1
No Yes Acidovorax citrulli AAC00-1   1 1
No Yes Acidovorax avenae subsp. avenae ATCC 19860   1 1
No Yes Collimonas fungivorans Ter331   1 1
No Yes Janthinobacterium sp. Marseille   1 1
No Yes Advenella kashmirensis WT001   1 1
No Yes Bordetella avium 197N   1 1
No Yes Methylovorus glucosetrophus SIP3-4   1 1
No Yes Asticcacaulis excentricus CB 48   1 1
No Yes Brevundimonas subvibrioides ATCC 15264   1 1
No Yes Maricaulis maris MCS10   1 1
No Yes Hirschia baltica ATCC 49814   2 2
No Yes Phaeobacter gallaeciensis 2.10   1 1
No Yes Magnetospirillum magneticum AMB-1   2 2
No Yes Candidatus Puniceispirillum marinum IMCC1322   1 1
No Yes Candidatus Pelagibacter sp. IMCC9063   1 1
No Yes Methylobacterium nodulans ORS 2060   1 1
No Yes Genome sequence of Rhizobium sp. strain IRBG74   1 1
No Yes Rhizobium etli CIAT 652   1 1
No Yes Rhizobium leguminosarum bv. viciae 3841   1 1
No Yes Agrobacterium tumefaciens str. C58   1 1
No Yes Agrobacterium radiobacter K84   2 2
No Yes Agrobacterium sp. H13-3   2 2
No Yes Agrobacterium vitis S4   1 1
No Yes Mesorhizobium ciceri biovar biserrulae WSM1271   1 1
No Yes Beijerinckia indica subsp. indica ATCC 9039   1 1
No Yes Bradyrhizobium japonicum USDA 110   1 1
No Yes Bradyrhizobium sp. ORS 278   1 1
No Yes Methylocystis sp. SC2   1 1
No Yes Saccharophagus degradans 2-40   3 3
No Yes Tolumonas auensis DSM 9187   1 1
No Yes Aeromonas veronii B565   1 1
No Yes Vibrio fischeri MJ11   1 1
No Yes Vibrio harveyi ATCC BAA-1116   1 1
No Yes Vibrio splendidus LGP32   2 2
No Yes Vibrio vulnificus MO6-24/O   2 2
No Yes Photobacterium profundum SS9   1 1
No Yes Psychromonas ingrahamii 37   1 1
No Yes Psychromonas sp. CNPT3   3 3
No Yes Shewanella frigidimarina NCIMB 400   1 1
No Yes Pseudoalteromonas atlantica T6c   1 1
No Yes Pseudoalteromonas haloplanktis TAC125   1 1
No Yes Glaciecola sp. 4H-3-7+YE-5   1 1
No Yes Alteromonas sp. SN2   1 1
No Yes Alcanivorax borkumensis SK2   1 1
No Yes Marinomonas sp. MWYL1   1 1
No Yes Methylomonas methanica MC09   1 1
No Yes Frateuria aurantia DSM 6220   1 1
No Yes Stenotrophomonas maltophilia K279a   2 2
No Yes Allochromatium vinosum DSM 180   1 1
No Yes Nitrosococcus watsonii C-113   1 1
No Yes Nitrosococcus halophilus Nc4   2 2
No Yes Proteus mirabilis HI4320   2 2
No Yes Edwardsiella ictaluri 93-146   2 2
No Yes Edwardsiella tarda EIB202   2 2
No Yes Rahnella sp. Y9602   2 2
No Yes Rahnella aquatilis CIP 78.65 = ATCC 33071   2 2
No Yes Yersinia pseudotuberculosis IP 31758   4 4
No Yes Yersinia pestis Pestoides F   4 4
No Yes Yersinia enterocolitica subsp. enterocolitica 8081   4 4
No Yes Serratia sp. AS12   1 1
No Yes Serratia sp. ATCC 39006   1 1
No Yes Serratia plymuthica AS9   1 1
No Yes Dickeya dadantii Ech703   1 1
No Yes Dickeya zeae Ech1591   1 1
No Yes Pectobacterium wasabiae WPP163   1 1
No Yes Pectobacterium sp. SCC3193   1 1
No Yes Pectobacterium atrosepticum SCRI1043   1 1
No Yes Pectobacterium carotovorum subsp. carotovorum PC1   3 3
No Yes Pantoea sp. At-9b   1 1
No Yes Pantoea ananatis LMG 20103   1 1
No Yes Erwinia tasmaniensis Et1/99   1 1
No Yes Erwinia sp. Ejp617   2 2
No Yes Erwinia pyrifoliae Ep1/96   1 1
No Yes Cronobacter turicensis z3032   1 1
No Yes Klebsiella oxytoca E718   3 3
No Yes Klebsiella variicola At-22   3 3
No Yes Klebsiella pneumoniae NTUH-K2044   1 1
No Yes Enterobacter sp. R4-368   1 1
No Yes Enterobacter sp. 638   1 1
No Yes Enterobacter asburiae LF7a   1 1
No Yes Azotobacter vinelandii DJ   2 2
No Yes Pseudomonas sp. TKP   1 1
No Yes Pseudomonas sp. UW4   1 1
No Yes Pseudomonas brassicacearum subsp. brassicacearum NFM421   1 1
No Yes Pseudomonas entomophila L48   2 2
No Yes Pseudomonas syringae pv. tomato str. DC3000   2 2
No Yes Pseudomonas fulva 12-X   1 1
No Yes Pseudomonas putida F1   2 2
No Yes Pseudomonas protegens Pf-5   1 1
No Yes Pseudomonas fluorescens SBW25   1 1
No Yes Pseudomonas mendocina ymp   2 2
No Yes Pseudomonas aeruginosa UCBPP-PA14   2 2
No Yes Pseudomonas sp. VLB120   2 2
No Yes Francisella sp. TX077308   1 1
No Yes Ignicoccus hospitalis KIN4/I   1 1
No Yes Caldivirga maquilingensis IC-167   1 1
No Yes Methanocella arvoryzae MRE50   1 1
No Yes Methanocella paludicola SANAE   4 4
No Yes Ferroglobus placidus DSM 10642   1 1
No Yes Haloterrigena turkmenica DSM 5511   1 1
No Yes Halomicrobium mukohataei DSM 12286   2 2
No Yes Haloarcula hispanica ATCC 33960   2 2
No Yes Haloarcula marismortui ATCC 43049   2 2
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 3 3
No Yes Cryptococcus neoformans var. grubii H99   4 4
No Yes Cryptococcus neoformans B-3501A   3 3
No Yes Cryptococcus neoformans JEC21   3 3
No Yes Aspergillus fumigatus A1163   4 4
No Yes Batrachochytrium dendrobatidis JEL423   1 1
No Yes Batrachochytrium dendrobatidis JAM81   1 1
No Yes Cyanothece sp. PCC 7425   1 1
No Yes Cyanothece sp. ATCC 51142   1 1
No Yes Cyanothece sp. PCC 8801   1 1
No Yes Cyanobacterium stanieri PCC 7202   1 1
No Yes Pleurocapsa minor Pleurocapsa sp. PCC 7327   1 1
No Yes Calothrix parietina Calothrix sp. PCC 6303   1 1
No Yes Mycoplasma fermentans JER   1 1
No Yes Mycoplasma fermentans PG18   1 1
No Yes Gordonibacter pamelaeae 7-10-1-b   1 1
No Yes Frankia sp. CcI3   1 1
No Yes Streptomyces rapamycinicus NRRL 5491   6 6
No Yes Streptomyces davawensis JCM 4913   5 5
No Yes Streptomyces fulvissimus DSM 40593   2 2
No Yes Streptomyces venezuelae ATCC 10712   4 4
No Yes Streptomyces collinus Tu 365   2 2
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488   1 1
No Yes Streptomyces hygroscopicus subsp. jinggangensis TL01   4 4
No Yes Amycolatopsis mediterranei RB   6 6
No Yes Amycolatopsis mediterranei S699   6 6
No Yes Amycolatopsis mediterranei S699   6 6
No Yes Amycolatopsis orientalis HCCB10007   3 3
No Yes Propionibacterium acnes ATCC 11828   1 1
No Yes Propionibacterium acnes TypeIA2 P.acn31   1 1
No Yes Propionibacterium acnes TypeIA2 P.acn17   1 1
No Yes Propionibacterium acnes TypeIA2 P.acn33   1 1
No Yes Propionibacterium acnes C1   1 1
No Yes Propionibacterium acnes HL096PA1   1 1
No Yes Propionibacterium acnes 6609   1 1
No Yes Propionibacterium acnes 266   1 1
No Yes Propionibacterium acnes KPA171202   1 1
No Yes Actinoplanes friuliensis DSM 7358   1 1
No Yes Mycobacterium gilvum Spyr1   1 1
No Yes Erysipelothrix rhusiopathiae SY1027   4 4
No Yes Desulfosporosinus meridiei DSM 13257   1 1
No Yes Clostridium perfringens SM101   3 3
No Yes Clostridium pasteurianum BC1   1 1
No Yes Clostridium botulinum BKT015925   2 2
No Yes Melissococcus plutonius ATCC 35311   1 1
No Yes Enterococcus mundtii QU 25   2 2
No Yes Enterococcus faecalis str. Symbioflor 1   1 1
No Yes Enterococcus faecalis D32   2 2
No Yes Enterococcus faecalis OG1RF   2 2
No Yes Enterococcus faecalis V583   3 3
No Yes Lactobacillus paracasei subsp. paracasei 8700:2   2 2
No Yes Lactobacillus casei LOCK919   2 2
No Yes Lactobacillus casei W56   2 2
No Yes Lactobacillus casei LC2W   2 2
No Yes Lactobacillus casei BD-II   2 2
No Yes Lactobacillus casei BL23   2 2
No Yes Lactobacillus casei str. Zhang   2 2
No Yes Lactobacillus rhamnosus LOCK908   2 2
No Yes Lactobacillus rhamnosus LOCK900   2 2
No Yes Lactobacillus rhamnosus ATCC 8530   2 2
No Yes Streptococcus constellatus subsp. pharyngis C1050   2 2
No Yes Streptococcus constellatus subsp. pharyngis C818   2 2
No Yes Streptococcus constellatus subsp. pharyngis C232   2 2
No Yes Streptococcus intermedius B196   2 2
No Yes Streptococcus intermedius C270   2 2
No Yes Streptococcus anginosus C238   2 2
No Yes Streptococcus equi subsp. zooepidemicus MGCS10565   1 1
No Yes Streptococcus equi subsp. zooepidemicus   1 1
No Yes Streptococcus dysgalactiae subsp. equisimilis 167   2 2
No Yes Streptococcus dysgalactiae subsp. equisimilis AC-2713   2 2
No Yes Streptococcus dysgalactiae subsp. equisimilis ATCC 12394   2 2
No Yes Streptococcus dysgalactiae subsp. equisimilis RE378   2 2
No Yes Streptococcus iniae SF1   2 2
No Yes Streptococcus pyogenes HSC5   2 2
No Yes Streptococcus pyogenes A20   2 2
No Yes Streptococcus pyogenes MGAS1882   2 2
No Yes Streptococcus pyogenes MGAS15252   2 2
No Yes Streptococcus pyogenes Alab49   2 2
No Yes Streptococcus pyogenes MGAS10750   2 2
No Yes Streptococcus pyogenes MGAS10270   3 3
No Yes Streptococcus pyogenes MGAS2096   3 3
No Yes Streptococcus pyogenes MGAS9429   2 2
No Yes Streptococcus pyogenes MGAS6180   2 2
No Yes Streptococcus pyogenes NZ131   2 2
No Yes Streptococcus pyogenes MGAS8232   2 2
No Yes Streptococcus pyogenes MGAS10394   2 2
No Yes Streptococcus pyogenes MGAS315   2 2
No Yes Streptococcus pyogenes SSI-1   2 2
No Yes Streptococcus pyogenes M1 476   2 2
No Yes Streptococcus pyogenes MGAS5005   2 2
No Yes Streptococcus pyogenes M1 GAS   2 2
No Yes Streptococcus pneumoniae A026   3 3
No Yes Streptococcus pneumoniae ST556   2 2
No Yes Streptococcus pneumoniae SPNA45   2 2
No Yes Streptococcus pneumoniae SPN994039   1 1
No Yes Streptococcus pneumoniae SPN994038   1 1
No Yes Streptococcus pneumoniae SPN034183   1 1
No Yes Streptococcus pneumoniae SPN034156   1 1
No Yes Streptococcus pneumoniae INV104   2 2
No Yes Streptococcus pneumoniae INV200   2 2
No Yes Streptococcus pneumoniae OXC141   1 1
No Yes Streptococcus pneumoniae gamPNI0373   2 2
No Yes Streptococcus pneumoniae AP200   2 2
No Yes Streptococcus pneumoniae ATCC 700669   2 2
No Yes Streptococcus pneumoniae TCH8431/19A   2 2
No Yes Streptococcus pneumoniae CGSP14   2 2
No Yes Streptococcus pneumoniae G54   2 2
No Yes Streptococcus pneumoniae JJA   2 2
No Yes Streptococcus pneumoniae 70585   2 2
No Yes Streptococcus pneumoniae Hungary19A-6   2 2
No Yes Streptococcus pneumoniae Taiwan19F-14   2 2
No Yes Streptococcus pneumoniae D39   2 2
No Yes Streptococcus pneumoniae 670-6B   2 2
No Yes Streptococcus pneumoniae R6   2 2
No Yes Streptococcus pneumoniae TIGR4   2 2
No Yes Streptococcus agalactiae ILRI112   2 2
No Yes Streptococcus agalactiae ILRI005   2 2
No Yes Streptococcus agalactiae 09mas018883   2 2
No Yes Streptococcus agalactiae 2-22   2 2
No Yes Streptococcus agalactiae SA20-06   2 2
No Yes Streptococcus agalactiae GD201008-001   1 1
No Yes Streptococcus agalactiae NEM316   2 2
No Yes Streptococcus agalactiae 2603V/R   2 2
No Yes Streptococcus suis T15   2 2
No Yes Streptococcus suis SC070731   2 2
No Yes Streptococcus suis S735   2 2
No Yes Streptococcus suis ST3   2 2
No Yes Streptococcus suis D9   2 2
No Yes Streptococcus suis SS12   2 2
No Yes Streptococcus suis ST1   2 2
No Yes Streptococcus suis A7   3 3
No Yes Streptococcus suis JS14   2 2
No Yes Streptococcus suis BM407   1 1
No Yes Streptococcus suis SC84   1 1
No Yes Streptococcus suis GZ1   3 3
No Yes Streptococcus suis 98HAH33   3 3
No Yes Streptococcus suis 05ZYH33   3 3
No Yes Paenibacillus sp. Y412MC10   6 6
No Yes Paenibacillus mucilaginosus KNP414   10 10
No Yes Paenibacillus mucilaginosus K02   11 11
No Yes Paenibacillus larvae subsp. larvae DSM 25430   1 1
No Yes Paenibacillus polymyxa CR1   1 1
No Yes Paenibacillus polymyxa SC2   2 2
No Yes Paenibacillus polymyxa E681   1 1
No Yes Bacillus infantis NRRL B-14911   1 1
No Yes Bacillus toyonensis BCT-7112   1 1
No Yes Bacillus thuringiensis serovar konkukian str. 97-27   1 1
No Yes Bacillus cereus biovar anthracis str. CI   1 1
No Yes Bacillus cereus AH820   1 1
No Yes Bacillus cereus G9842   1 1
No Yes Bacillus cereus E33L   2 2
No Yes Bacillus anthracis str. H9401   1 1
No Yes Bacillus anthracis str. CDC 684   1 1
No Yes Bacillus anthracis str. 'Ames Ancestor'   1 1
No Yes Bacillus anthracis str. Sterne   1 1
No Yes Bacillus anthracis str. Ames   1 1
No Yes Staphylococcus aureus subsp. aureus MSHR1132   1 1
No Yes Staphylococcus aureus CA-347   1 1
No Yes Staphylococcus aureus Bmb9393   1 1
No Yes Staphylococcus aureus M1   1 1
No Yes Staphylococcus aureus 08BA02176   2 2
No Yes Staphylococcus aureus ST228/18412   1 1
No Yes Staphylococcus aureus ST228/18341   1 1
No Yes Staphylococcus aureus ST228/16125   1 1
No Yes Staphylococcus aureus ST228/16035   1 1
No Yes Staphylococcus aureus ST228/15532   1 1
No Yes Staphylococcus aureus ST228/10497   1 1
No Yes Staphylococcus aureus ST228/10388   1 1
No Yes Staphylococcus aureus 04-02981   1 1
No Yes Staphylococcus aureus RF122   2 2
No Yes Staphylococcus aureus subsp. aureus Z172   1 1
No Yes Staphylococcus aureus subsp. aureus 6850   2 2
No Yes Staphylococcus aureus subsp. aureus SA957   1 1
No Yes Staphylococcus aureus subsp. aureus CN1   1 1
No Yes Staphylococcus aureus subsp. aureus SA40   1 1
No Yes Staphylococcus aureus subsp. aureus 11819-97   1 1
No Yes Staphylococcus aureus subsp. aureus M013   1 1
No Yes Staphylococcus aureus subsp. aureus HO 5096 0412   1 1
No Yes Staphylococcus aureus subsp. aureus VC40   1 1
No Yes Staphylococcus aureus subsp. aureus T0131   1 1
No Yes Staphylococcus aureus subsp. aureus LGA251   2 2
No Yes Staphylococcus aureus subsp. aureus ECT-R 2   1 1
No Yes Staphylococcus aureus subsp. aureus JKD6159   2 2
No Yes Staphylococcus aureus subsp. aureus ED133   1 1
No Yes Staphylococcus aureus subsp. aureus ED98   1 1
No Yes Staphylococcus aureus subsp. aureus TW20   1 1
No Yes Staphylococcus aureus subsp. aureus 55/2053   2 2
No Yes Staphylococcus aureus subsp. aureus TCH60   2 2
No Yes Staphylococcus aureus subsp. aureus str. JKD6008   1 1
No Yes Staphylococcus aureus subsp. aureus 71193   2 2
No Yes Staphylococcus aureus subsp. aureus S0385   2 2
No Yes Staphylococcus aureus subsp. aureus str. Newman   1 1
No Yes Staphylococcus aureus subsp. aureus Mu3   1 1
No Yes Staphylococcus aureus subsp. aureus USA300_TCH1516   1 1
No Yes Staphylococcus aureus subsp. aureus USA300_FPR3757   1 1
No Yes Staphylococcus aureus subsp. aureus JH9   1 1
No Yes Staphylococcus aureus subsp. aureus MSSA476   1 1
No Yes Staphylococcus aureus subsp. aureus MRSA252   2 2
No Yes Staphylococcus aureus subsp. aureus MW2   1 1
No Yes Staphylococcus aureus subsp. aureus N315   1 1
No Yes Staphylococcus aureus subsp. aureus Mu50   1 1
No Yes Staphylococcus aureus subsp. aureus COL   1 1
No Yes Staphylococcus aureus subsp. aureus NCTC 8325   1 1
No Yes Echinicola vietnamensis DSM 17526   4 4
No Yes Emticicia oligotrophica DSM 17448   3 3
No Yes Prevotella dentalis DSM 3688   3 3
No Yes Alistipes shahii WAL 8301   9 8
No Yes Bacteroides xylanisolvens XB1A   13 13
No Yes Bacteroides fragilis 638R   2 2
No Yes Bacteroides fragilis NCTC 9343   3 3
No Yes Nonlabens dokdonensis DSW-6   1 1
No Yes Singulisphaera acidiphila DSM 18658   1 1
No Yes Spirochaeta thermophila DSM 6578   2 2
No Yes Helicobacter pylori BM012S   1 1
No Yes Helicobacter pylori BM012A   1 1
No Yes Helicobacter pylori SouthAfrica20   1 1
No Yes Helicobacter pylori UM298   1 1
No Yes Helicobacter pylori UM066   1 1
No Yes Helicobacter pylori UM037   1 1
No Yes Helicobacter pylori UM299   1 1
No Yes Helicobacter pylori UM032   1 1
No Yes Helicobacter pylori OK310   1 1
No Yes Helicobacter pylori OK113   1 1
No Yes Helicobacter pylori Rif2   1 1
No Yes Helicobacter pylori Rif1   1 1
No Yes Helicobacter pylori HUP-B14   1 1
No Yes Helicobacter pylori PeCan18   1 1
No Yes Helicobacter pylori Shi169   1 1
No Yes Helicobacter pylori Shi112   1 1
No Yes Helicobacter pylori Shi417   1 1
No Yes Helicobacter pylori XZ274   1 1
No Yes Helicobacter pylori Aklavik117   1 1
No Yes Helicobacter pylori SNT49   1 1
No Yes Helicobacter pylori Puno135   1 1
No Yes Helicobacter pylori Puno120   1 1
No Yes Helicobacter pylori ELS37   1 1
No Yes Helicobacter pylori Gambia94/24   1 1
No Yes Helicobacter pylori SouthAfrica7   1 1
No Yes Helicobacter pylori India7   1 1
No Yes Helicobacter pylori Lithuania75   1 1
No Yes Helicobacter pylori 2017   1 1
No Yes Helicobacter pylori 2018   1 1
No Yes Helicobacter pylori F57   1 1
No Yes Helicobacter pylori F30   1 1
No Yes Helicobacter pylori F16   1 1
No Yes Helicobacter pylori Sat464   1 1
No Yes Helicobacter pylori Cuz20   1 1
No Yes Helicobacter pylori PeCan4   1 1
No Yes Helicobacter pylori SJM180   1 1
No Yes Helicobacter pylori B8   1 1
No Yes Helicobacter pylori 52   1 1
No Yes Helicobacter pylori v225d   1 1
No Yes Helicobacter pylori 83   1 1
No Yes Helicobacter pylori 35A   1 1
No Yes Helicobacter pylori P12   1 1
No Yes Helicobacter pylori G27   1 1
No Yes Helicobacter pylori Shi470   1 1
No Yes Helicobacter pylori HPAG1   1 1
No Yes Helicobacter pylori 51   1 1
No Yes Helicobacter pylori F32   1 1
No Yes Helicobacter pylori J99   1 1
No Yes Helicobacter pylori 26695   1 1
No Yes Helicobacter pylori 26695   1 1
No Yes Desulfocapsa sulfexigens DSM 10523   1 1
No Yes Desulfobacula toluolica Tol2   1 1
No Yes Desulfovibrio hydrothermalis AM13 = DSM 14728   4 4
No Yes Desulfovibrio gigas DSM 1382 = ATCC 19364   1 1
No Yes Desulfovibrio desulfuricans ND132   1 1
No Yes Geobacter sp. M18   1 1
No Yes Sorangium cellulosum So0157-2   3 3
No Yes Anaeromyxobacter sp. K   1 1
No Yes Anaeromyxobacter dehalogenans 2CP-C   1 1
No Yes Myxococcus stipitatus DSM 14675   1 1
No Yes Burkholderia phenoliruptrix BR3459a   1 1
No Yes Ralstonia pickettii 12J   1 1
No Yes Ralstonia solanacearum FQY_4   2 2
No Yes Ralstonia solanacearum Po82   2 2
No Yes Ralstonia solanacearum PSI07   3 3
No Yes Ralstonia solanacearum CMR15   2 2
No Yes Ralstonia solanacearum GMI1000   2 2
No Yes Burkholderia sp. YI23   1 1
No Yes Burkholderia sp. CCGE1003   1 1
No Yes Burkholderia sp. CCGE1001   1 1
No Yes Burkholderia sp. KJ006   1 1
No Yes Burkholderia thailandensis MSMB121   1 1
No Yes Burkholderia pseudomallei MSHR305   2 2
No Yes Burkholderia pseudomallei NCTC 13179   1 1
No Yes Burkholderia pseudomallei BPC006   1 1
No Yes Burkholderia pseudomallei 1026b   1 1
No Yes Burkholderia pseudomallei MSHR346   1 1
No Yes Burkholderia pseudomallei 668   1 1
No Yes Burkholderia pseudomallei 1710b   1 1
No Yes Burkholderia pseudomallei K96243   1 1
No Yes Burkholderia mallei NCTC 10229   1 1
No Yes Burkholderia mallei NCTC 10247   1 1
No Yes Burkholderia mallei ATCC 23344   1 1
No Yes Burkholderia lata   2 2
No Yes Burkholderia ambifaria MC40-6   3 3
No Yes Burkholderia cenocepacia MC0-3   2 2
No Yes Burkholderia cenocepacia AU 1054   2 2
No Yes Burkholderia cenocepacia J2315   1 1
No Yes Burkholderia multivorans ATCC 17616   1 1
No Yes Burkholderia cepacia GG4   2 2
No Yes Candidatus Symbiobacter mobilis Comamonadaceae bacterium CR   1 1
No Yes Variovorax paradoxus B4   1 1
No Yes Variovorax paradoxus EPS   1 1
No Yes Nitrosomonas sp. AL212   1 1
No Yes Phaeobacter gallaeciensis DSM 17395   1 1
No Yes Phaeobacter gallaeciensis DSM 26640   1 1
No Yes Magnetospirillum gryphiswaldense MSR-1 v2   1 1
No Yes Candidatus Pelagibacter ubique HTCC1062   1 1
No Yes Rhizobium etli CFN 42   1 1
No Yes Rhizobium etli bv. mimosae str. Mim1   1 1
No Yes Rhizobium leguminosarum bv. trifolii WSM2304   1 1
No Yes Rhizobium leguminosarum bv. trifolii WSM1325   1 1
No Yes Simiduia agarivorans SA1 = DSM 21679   2 2
No Yes Vibrio fischeri ES114   1 1
No Yes Vibrio sp. EJY3   3 3
No Yes Vibrio alginolyticus NBRC 15630 = ATCC 17749   2 2
No Yes Vibrio nigripulchritudo VibrioScope   2 2
No Yes Vibrio vulnificus CMCP6   4 4
No Yes Vibrio vulnificus YJ016   5 5
No Yes Alteromonas macleodii str. 'Balearic Sea AD45'   1 1
No Yes Alteromonas macleodii ATCC 27126   1 1
No Yes Stenotrophomonas maltophilia D457   1 1
No Yes Stenotrophomonas maltophilia JV3   1 1
No Yes Stenotrophomonas maltophilia R551-3   1 1
No Yes Thioflavicoccus mobilis 8321   1 1
No Yes Proteus mirabilis BB2000   2 2
No Yes Edwardsiella tarda C07-087   2 2
No Yes Edwardsiella tarda FL6-60   2 2
No Yes Rahnella aquatilis HX2   2 2
No Yes Yersinia pseudotuberculosis PB1/+   4 4
No Yes Yersinia pseudotuberculosis YPIII   4 4
No Yes Yersinia pseudotuberculosis IP 32953   4 4
No Yes Yersinia pestis biovar Microtus str. 91001   4 4
No Yes Yersinia pestis A1122   4 4
No Yes Yersinia pestis Z176003   4 4
No Yes Yersinia pestis D182038   4 4
No Yes Yersinia pestis D106004   4 4
No Yes Yersinia pestis biovar Medievalis str. Harbin 35   4 4
No Yes Yersinia pestis Nepal516   4 4
No Yes Yersinia pestis Antiqua   4 4
No Yes Yersinia pestis Angola   4 4
No Yes Yersinia pestis CO92   4 4
No Yes Yersinia pestis KIM10+   4 4
No Yes Yersinia enterocolitica subsp. palearctica 105.5R(r)   4 4
No Yes Yersinia enterocolitica subsp. palearctica Y11   4 4
No Yes Serratia sp. AS13   1 1
No Yes Serratia plymuthica S13   1 1
No Yes Serratia plymuthica 4Rx13   1 1
No Yes Dickeya dadantii Ech586   3 3
No Yes Dickeya dadantii 3937   3 3
No Yes Pectobacterium carotovorum subsp. carotovorum PCC21   2 2
No Yes Pantoea ananatis LMG 5342   3 3
No Yes Pantoea ananatis PA13   2 2
No Yes Pantoea ananatis AJ13355   1 1
No Yes Erwinia pyrifoliae DSM 12163   1 1
No Yes Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980   1 1
No Yes Klebsiella oxytoca KCTC 1686   3 3
No Yes Klebsiella pneumoniae subsp. pneumoniae 1084   1 1
No Yes Enterobacter cloacae SCF1   2 2
No Yes Azotobacter vinelandii CA6   2 2
No Yes Azotobacter vinelandii CA   2 2
No Yes Pseudomonas denitrificans ATCC 13867   1 1
No Yes Pseudomonas syringae pv. phaseolicola 1448A   2 2
No Yes Pseudomonas syringae pv. syringae B728a   1 1
No Yes Pseudomonas stutzeri DSM 10701   1 1
No Yes Pseudomonas monteilii SB3101   1 1
No Yes Pseudomonas monteilii SB3078   1 1
No Yes Pseudomonas putida H8234   1 1
No Yes Pseudomonas putida HB3267   1 1
No Yes Pseudomonas putida NBRC 14164   1 1
No Yes Pseudomonas putida DOT-T1E   2 2
No Yes Pseudomonas putida S16   1 1
No Yes Pseudomonas putida BIRD-1   1 1
No Yes Pseudomonas putida W619   1 1
No Yes Pseudomonas putida ND6   1 1
No Yes Pseudomonas putida KT2440   2 2
No Yes Pseudomonas putida GB-1   2 2
No Yes Pseudomonas protegens CHA0   1 1
No Yes Pseudomonas poae RE*1-1-14   2 2
No Yes Pseudomonas fluorescens F113   2 2
No Yes Pseudomonas fluorescens A506   2 2
No Yes Pseudomonas fluorescens R124   1 1
No Yes Pseudomonas fluorescens Pf0-1   1 1
No Yes Pseudomonas resinovorans NBRC 106553   2 2
No Yes Pseudomonas mendocina NK-01   1 1
No Yes Pseudomonas aeruginosa SCV20265   2 2
No Yes Pseudomonas aeruginosa MTB-1   1 1
No Yes Pseudomonas aeruginosa LES431   1 1
No Yes Pseudomonas aeruginosa RP73   2 2
No Yes Pseudomonas aeruginosa B136-33   1 1
No Yes Pseudomonas aeruginosa PA1R   1 1
No Yes Pseudomonas aeruginosa PA1   1 1
No Yes Pseudomonas aeruginosa DK2   2 2
No Yes Pseudomonas aeruginosa NCGM2.S1   1 1
No Yes Pseudomonas aeruginosa M18   1 1
No Yes Pseudomonas aeruginosa LESB58   1 1
No Yes Pseudomonas aeruginosa PA7   1 1
No Yes Pseudomonas aeruginosa PAO1   1 1
No Yes Acinetobacter junii SH205   1 1
No Yes Haloarcula hispanica N601   2 2
No Yes Homo sapiens 75_37 (old version GRC) Human 4 4
No Yes Homo sapiens (NCBI version) Human 2 2
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 2 2
No Yes Moniliophthora perniciosa FA553 (Genome survey)   2 2
No Yes Ricinus communis (Early assembly) Castor bean 2 2
No Yes Vibrio campbellii ATCC BAA-1116 (Duplicate of NC)   1 1
No Yes Homo sapiens 69_37 Human 1 1
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 1 1
No Yes Gorilla gorilla 69_3.1 Western gorilla 1 1
No Yes Pongo abelii 69_2 Sumatran orangutan 1 1
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 1 1
No Yes Macaca mulatta 69_1 Rhesus monkey 1 1
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 1 1
No Yes Otolemur garnettii 69_3 Small-eared galago 1 1
No Yes Microcebus murinus 69_1 Gray mouse lemur 1 1
No Yes Rattus norvegicus 69_3.4 Norway rat 2 2
No Yes Mus musculus 69_38 House mouse 2 2
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 2 2
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 1 1
No Yes Cavia porcellus 69_3 Domestic guinea pig 1 1
No Yes Oryctolagus cuniculus 69_2 Rabbit 2 2
No Yes Sus scrofa 69_10.2 Pig 1 1
No Yes Bos taurus 69_3.1 Cattle 2 2
No Yes Vicugna pacos 69_1 Alpaca 1 1
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 1 1
No Yes Mustela putorius furo 69_1.0 Domestic ferret 1 1
No Yes Ailuropoda melanoleuca 69_1 Giant panda 1 1
No Yes Canis familiaris 69_3.1 Dog 2 2
No Yes Felis catus 69 Domestic cat 1 1
No Yes Equus caballus 69_2 Horse 1 1
No Yes Myotis lucifugus 69_2.0 Little brown bat 2 2
No Yes Pteropus vampyrus 69_1 Large flying fox 1 1
No Yes Sorex araneus 69_1 European shrew 1 1
No Yes Erinaceus europaeus 69 Western European hedgehog 1 1
No Yes Procavia capensis 69_1 Cape rock hyrax 1 1
No Yes Loxodonta africana 69_3 African savanna elephant 1 1
No Yes Echinops telfairi 69 Small Madagascar hedgehog 1 1
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 1 1
No Yes Macropus eugenii 69_1.0 Tammar wallaby 1 1
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 1 1
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 1 1
No Yes Ornithorhynchus anatinus 69_5 Platypus 2 2
No Yes Petromyzon marinus 69_7.0 Sea lamprey 1 1
No Yes Meleagris gallopavo 69_2 Turkey 2 2
No Yes Gallus gallus 69_2 Chicken 2 2
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 1 1
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 2 2
No Yes Anolis carolinensis 69_2.0 Green anole 2 2
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 2 2
No Yes Latimeria chalumnae 69_1 Coelacanth 2 2
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 2 2
No Yes Takifugu rubripes 69_4 Torafugu 1 1
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 1 1
No Yes Oryzias latipes 69_1 Japanese medaka 2 2
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 1 1
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 2 2
No Yes Danio rerio 69_9 Zebrafish 2 2
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 1 1
No Yes Ciona intestinalis 69 Vase tunicate 1 1
No Yes 1_050719N (meta-genome)   1 1
No Yes 1_Upper_euphotic (meta-genome)   1 1
No Yes 2_050719S (meta-genome)   11 11
No Yes 3_050719R (meta-genome)   9 9
No Yes 3_Below_base_of_euphotic (meta-genome)   1 1
No Yes 4_050719Q (meta-genome)   7 7
No Yes 4_Deep_abyss (meta-genome)   2 2
No Yes 5_050719P (meta-genome)   14 14
No Yes 5_Below_upper_mesopelagic (meta-genome)   1 1
No Yes Air microbial communities Singapore indoor air filters 1 (meta-genome)   4 4
No Yes Air microbial communities Singapore indoor air filters 2 (meta-genome)   3 3
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   11 11
No Yes Bath Hot Springs, planktonic community (meta-genome)   1 1
No Yes Combined (meta-genome)   35 35
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   24 24
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)   13 13
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   9 9
No Yes Dump bottom (Dump bottom) (meta-genome)   60 60
No Yes Dump top (Dump top) (meta-genome)   35 35
No Yes Endophytic microbiome from Rice (meta-genome)   2 2
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #1 (meta-genome)   5 5
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome)   6 6
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   11 11
No Yes Fungus garden combined (combined) (meta-genome)   9 9
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   20 20
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   25 25
No Yes Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes   2 2
No Yes Guerrero Negro salt ponds hypersaline mat 01(G) (meta-genome)   3 3
No Yes Guerrero Negro salt ponds hypersaline mat 02(H) (meta-genome)   6 6
No Yes Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome)   2 2
No Yes Guerrero Negro salt ponds hypersaline mat 04(N) (meta-genome)   5 5
No Yes Guerrero Negro salt ponds hypersaline mat 05(O) (meta-genome)   15 15
No Yes Guerrero Negro salt ponds hypersaline mat 06(P) (meta-genome)   4 4
No Yes Guerrero Negro salt ponds hypersaline mat 07(S) (meta-genome)   5 5
No Yes Guerrero Negro salt ponds hypersaline mat 08(T) (meta-genome)   5 5
No Yes Guerrero Negro salt ponds hypersaline mat 09(Y) (meta-genome)   6 6
No Yes Guerrero Negro salt ponds hypersaline mat 10(Z) (meta-genome)   4 4
No Yes Hindgut microbiome of Nasutitermes sp. (Costa Rica) (meta-genome)   4 4
No Yes Hot Spring microbial communities from Yellowstone Obsidian Hot Spring, Sample 10594 (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP11 from Octopus Springs (meta-genome)   4 4
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   17 17
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome)   4 4
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime (meta-genome)   5 5
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP19 from Cistern Spring (meta-genome)   3 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome)   6 6
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP3 from Monarch Geyser, Norris Geyser Basin (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP4 from Joseph's Coat Springs (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome)   3 3
No Yes Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)   4 4
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   9 9
No Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome)   8 8
No Yes Marine anammox bioreactor enriched for Scalindua species (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   39 39
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   10 10
No Yes Methylotrophic community from Lake Washington sediment Formate enrichment (meta-genome)   2 2
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   12 12
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   10 10
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)   6 6
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   12 12
No Yes Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome)   7 7
No Yes Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome)   9 9
No Yes NCBI 2017_08 genome   59723 59662
No Yes Nymph Lake Bulk Water (meta-genome)   1 1
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   22 22
No Yes Protozoadb 2010_08 (Protozoadb)   14 14
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   9 9
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   8 8
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   3 3
No Yes Sludge/US, Jazz Assembly (meta-genome)   2 2
No Yes Sludge/US, Phrap Assembly (meta-genome)   5 5
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   30 30
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   55 55
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   30 30
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   15 15
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   12 12
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   20 20
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   37 37
No Yes Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)   3 3
No Yes STRING v9.0.5 (STRING)   581 580
No Yes Switchgrass field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing switchgr (meta-genome)   5 5
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   31 31
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome)   7 7
No Yes Termite Protist Endosymbiont Community (meta-genome)   1 1
No Yes Uniprot 2018_03 genome   17259 17214
No Yes Uranium Contaminated Groundwater FW106 (meta-genome)   2 2
No Yes Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)   10 10
No Yes Global Ocean Sampling Expedition (GOS)   684 684
No Yes NCBI plasmid sequences (Plasmids)   39 39
No Yes NCBI viral sequences (Viral)   70 70
No Yes PDB chains (SCOP 1.75) (PDB)   21 21
No Yes Protein Data Bank (all PDB sequenc)   86 86
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   210 210
No Yes TargetDB (Targets)   27 27
No Yes The Salmonella enterica Pan-genome (meta-genome)   1 1
No Yes UniProt viral sequences (Viral)   71 71

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