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ENTH/VHS domain superfamily domain assignments
in
Coniophora puteana

Assignment details

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Coniophora puteana has 13 significant domains in 13 proteins.

     

Sequence ID   Evalue   Region   Family  
jgi|Conpu1|107189|estExt_Genewise1.C_9_t20002   5.09e-24   2-129   Phosphoinositide-binding clathrin adaptor, N-terminal domain  
jgi|Conpu1|109031|estExt_Genewise1.C_11_t10385   8.58e-56   4-148   ENTH domain  
jgi|Conpu1|116092|estExt_Genewise1Plus.C_1_t60026   1.41e-25   29-144   Phosphoinositide-binding clathrin adaptor, N-terminal domain  
jgi|Conpu1|136269|estExt_fgenesh1_pm.C_4_t10369   0.000000693   353-489   RPR domain (SMART 00582 )  
jgi|Conpu1|136662|estExt_fgenesh1_pm.C_5_t10178   1.28e-32   42-173   RPR domain (SMART 00582 )  
jgi|Conpu1|138519|estExt_fgenesh1_pm.C_90413   0.000000000051   3-148   RPR domain (SMART 00582 )  
jgi|Conpu1|139438|estExt_fgenesh1_pm.C_130117   2.83e-19   298-413   VHS domain  
jgi|Conpu1|146994|estExt_fgenesh1_pg.C_150116   4.22e-34   10-158   VHS domain  
jgi|Conpu1|167825|estExt_Genemark1.C_11_t10233   1.74e-52   4-146   ENTH domain  
jgi|Conpu1|56043|e_gw1.6.851.1   4.49e-48   14-161   ENTH domain  
jgi|Conpu1|60029|e_gw1.9.328.1   8.43e-40   8-146   VHS domain  
jgi|Conpu1|68804|fgenesh1_pg.1_#_270   3.14e-44   33-173   VHS domain  
jgi|Conpu1|95934|estExt_Genewise1.C_1_t50211   1.21e-34   15-152   VHS domain  
 
Weak hits:
jgi|Conpu1|57252|e_gw1.7.1362.1   0.0732   7-72,107-124   RPR domain (SMART 00582 )  

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Select to display   Genome       Domains   Proteins
No Yes ALL   80138 80138
No Yes Homo sapiens 76_38 Human 166 166
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 22 22
No Yes Gorilla gorilla 76_3.1 Western gorilla 42 42
No Yes Pongo abelii 76_2 Sumatran orangutan 28 28
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 31 31
No Yes Papio anubis 76 Olive baboon 32 32
No Yes Macaca mulatta 76_1 Rhesus monkey 51 51
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 79 79
No Yes Otolemur garnettii 76_3 Small-eared galago 28 28
No Yes Microcebus murinus 76_1 Gray mouse lemur 22 22
No Yes Rattus norvegicus 76_5.0 Norway rat 30 30
No Yes Mus musculus 76_38 House mouse 73 73
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 22 22
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 25 25
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 27 27
No Yes Cavia porcellus 76_3 Domestic guinea pig 28 28
No Yes Oryctolagus cuniculus 76_2 Rabbit 24 24
No Yes Ochotona princeps 76 American pika 25 24
No Yes Tupaia belangeri 76 Northern tree shrew 24 22
No Yes Sus scrofa 76_10.2 Pig 26 26
No Yes Bos taurus 76_3.1 Cattle 33 33
No Yes Ovis aries 76_3.1 Sheep 32 32
No Yes Vicugna pacos 76_1 Alpaca 15 15
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 26 26
No Yes Mustela putorius furo 76_1.0 Domestic ferret 25 25
No Yes Ailuropoda melanoleuca 76_1 Giant panda 29 29
No Yes Canis familiaris 76_3.1 Dog 38 38
No Yes Felis catus 76_6.2 Domestic cat 30 30
No Yes Equus caballus 76_2 Horse 30 30
No Yes Myotis lucifugus 76_2.0 Little brown bat 28 28
No Yes Pteropus vampyrus 76_1 Large flying fox 25 25
No Yes Sorex araneus 76_1 European shrew 18 17
No Yes Erinaceus europaeus 76 Western European hedgehog 22 22
No Yes Procavia capensis 76_1 Cape rock hyrax 24 24
No Yes Loxodonta africana 76_3 African savanna elephant 41 41
No Yes Echinops telfairi 76 Small Madagascar hedgehog 21 20
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 32 32
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 20 18
No Yes Macropus eugenii 76_1.0 Tammar wallaby 23 22
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 39 39
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 31 31
No Yes Ornithorhynchus anatinus 76_5 Platypus 30 30
No Yes Saccoglossus kowalevskii v3.0   71 71
No Yes Petromyzon marinus 76_7.0 Sea lamprey 15 15
No Yes Meleagris gallopavo 76_2 Turkey 41 41
No Yes Gallus gallus 76_4 Chicken 28 28
No Yes Anas platyrhynchos 76_1.0 Mallard 25 25
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 26 26
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 24 24
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 33 33
No Yes Anolis carolinensis 76_2.0 Green anole 32 32
No Yes Xenopus laevis African clawed frog 48 48
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 44 44
No Yes Latimeria chalumnae 76_1 Coelacanth 34 34
No Yes Lepisosteus oculatus 76 Spotted gar 34 34
No Yes Gadus morhua 76_1 Atlantic cod 42 42
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 59 59
No Yes Takifugu rubripes 76_4 Torafugu 126 126
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 48 48
No Yes Oryzias latipes 76_1 Japanese medaka 38 38
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 38 38
No Yes Poecilia formosa 76 Amazon molly 41 41
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 58 58
No Yes Astyanax mexicanus 76 Mexican tetra 37 37
No Yes Danio rerio 76_9 Zebrafish 69 69
No Yes Oikopleura dioica   16 16
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 21 21
No Yes Ciona intestinalis 76 Vase tunicate 16 16
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 17 16
No Yes Adineta vaga   44 44
No Yes Octopus bimaculoides 280   25 25
No Yes Crassostrea gigas 22 Pacific oyster 12 12
No Yes Lottia gigantea Owl limpet 13 13
No Yes Helobdella robusta   26 26
No Yes Capitella sp. I   18 18
No Yes Danaus plexippus OGS1.0 Monarch butterfly 12 12
No Yes Heliconius melpomene Postman butterfly 11 11
No Yes Bombyx mori Domestic silkworm 12 12
No Yes Nasonia vitripennis Jewel wasp 16 16
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 27 27
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 15 15
No Yes Linepithema humile v1.1 Argentine ant 15 15
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 12 12
No Yes Solenopsis invicta v.2.2.3 Red fire ant 10 10
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 14 14
No Yes Atta cephalotes v1.1   12 12
No Yes Camponotus floridanus v3.3 Florida carpenter ant 14 14
No Yes Lucilia cuprina Australian sheep blowfly 15 15
No Yes Drosophila grimshawi 1.3   15 15
No Yes Drosophila willistoni 1.3   14 14
No Yes Drosophila pseudoobscura 2.13   14 14
No Yes Drosophila persimilis 1.3   14 14
No Yes Drosophila suzukii   12 12
No Yes Drosophila yakuba 1.3   14 14
No Yes Drosophila simulans 1.3   12 12
No Yes Drosophila sechellia 1.3   13 13
No Yes Drosophila melanogaster 76_5 Fruit fly 42 42
No Yes Drosophila erecta 1.3   14 14
No Yes Drosophila ananassae 1.3   14 14
No Yes Drosophila virilis 1.2   13 13
No Yes Drosophila mojavensis 1.3   14 14
No Yes Megaselia scalaris 22   10 10
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 16 16
No Yes Culex pipiens quinquefasciatus Southern house mosquito 18 18
No Yes Anopheles darlingi 22 American malaria mosquito 12 12
No Yes Anopheles gambiae 49_3j African malaria mosquito 19 19
No Yes Tribolium castaneum 3.0 Red flour beetle 15 15
No Yes Pediculus humanus corporis (Early assembly) Human body louse 14 14
No Yes Acyrthosiphon pisum Pea aphid 16 16
No Yes Rhodnius prolixus 22   16 16
No Yes Daphnia pulex Common water flea 12 12
No Yes Strigamia maritima 22   15 15
No Yes Sarcoptes scabiei   10 10
No Yes Tetranychus urticae Two-spotted spider mite 12 12
No Yes Ixodes scapularis (Preliminary) Black-legged tick 12 12
No Yes Pristionchus pacificus   14 14
No Yes Meloidogyne incognita Southern root-knot nematode 19 19
No Yes Meloidogyne hapla   9 9
No Yes Onchocerca volvulus 22   11 10
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 14 14
No Yes Caenorhabditis japonica   11 11
No Yes Caenorhabditis brenneri   18 18
No Yes Caenorhabditis remanei   15 15
No Yes Caenorhabditis elegans 76_235 Roundworm 30 30
No Yes Caenorhabditis briggsae 2   12 12
No Yes Trichinella spiralis 22   10 10
No Yes Hymenolepis microstoma   14 14
No Yes Echinococcus multilocularis   15 15
No Yes Echinococcus granulosus   15 15
No Yes Taenia solium Pork tapeworm 14 14
No Yes Schistosoma mansoni   15 15
No Yes Mnemiopsis leidyi Sea walnut 12 12
No Yes Thelohanellus kitauei   8 8
No Yes Acropora digitifera v1.0   6 6
No Yes Nematostella vectensis 1.0 Starlet sea anemone 14 14
No Yes Hydra vulgaris   14 14
No Yes Amphimedon queenslandica   16 16
No Yes Trichoplax adhaerens   13 13
No Yes Proterospongia sp. ATCC 50818   14 14
No Yes Monosiga brevicollis   13 12
No Yes Sphaeroforma arctica JP610   12 12
No Yes Capsaspora owczarzaki ATCC 30864   14 14
No Yes Conidiobolus coronatus NRRL28638 v1.0   10 10
No Yes Mortierella verticillata NRRL 6337   16 16
No Yes Phycomyces blakesleeanus   19 19
No Yes Rhizopus oryzae RA 99-880   16 16
No Yes Mucor circinelloides   18 18
No Yes Rhizomucor miehei CAU432   17 17
No Yes Malassezia globosa CBS 7966   16 16
No Yes Sporisorium reilianum 22   11 11
No Yes Ustilago maydis   11 11
No Yes Mixia osmundae IAM 14324 v1.0   12 12
No Yes Cronartium quercuum f. sp. fusiforme G11 v1.0   12 12
No Yes Puccinia graminis f. sp. tritici CRL 75-36-700-3   10 10
No Yes Melampsora laricis-populina   11 11
No Yes Rhodotorula graminis WP1 v1.0   11 11
No Yes Sporobolomyces roseus IAM 13481   8 8
No Yes Microbotryum violaceum 22   12 12
No Yes Wallemia sebi v1.0   9 9
No Yes Sphaerobolus stellatus v1.0   11 11
No Yes Piloderma croceum F 1598 v1.0   12 12
No Yes Serpula lacrymans var. lacrymans S7.9   9 9
No Yes Coniophora puteana   13 13
No Yes Hydnomerulius pinastri v2.0   13 13
No Yes Paxillus rubicundulus Ve08.2h10 v1.0   11 11
No Yes Pisolithus microcarpus 441 v1.0   12 12
No Yes Pisolithus tinctorius Marx 270 v1.0   12 12
No Yes Scleroderma citrinum Foug A v1.0   11 11
No Yes Coprinopsis cinerea okayama7 130 v3   13 13
No Yes Pleurotus ostreatus Oyster mushroom 11 11
No Yes Amanita thiersii Skay4041 v1.0   12 12
No Yes Amanita muscaria Koide v1.0 Fly agaric 13 13
No Yes Galerina marginata v1.0   11 11
No Yes Hebeloma cylindrosporum h7 v2.0   12 12
No Yes Laccaria bicolor S238N-H82   12 12
No Yes Agaricus bisporus var. bisporus   10 10
No Yes Schizophyllum commune   11 11
No Yes Stereum hirsutum FP-91666 SS1 v1.0   13 13
No Yes Heterobasidion annosum   11 11
No Yes Gloeophyllum trabeumv1.0   11 11
No Yes Punctularia strigosozonata v1.0   11 11
No Yes Sebacina vermifera MAFF 305830 v1.0   14 14
No Yes Fomitiporia mediterranea v1.0   10 10
No Yes Tulasnella calospora AL13/4D v1.0   16 16
No Yes Postia placenta   16 16
No Yes Wolfiporia cocos MD-104 SS10 v1.0   11 11
No Yes Fomitopsis pinicolav1.0   12 12
No Yes Fomitopsis pinicola FP-58527 SS1 v3.0   12 12
No Yes Phanerochaete chrysosporium RP-78 2.1   12 11
No Yes Dichomitus squalens   12 12
No Yes Trametes versicolor v1.0   13 13
No Yes Tremella mesenterica Witches' butter 11 11
No Yes Daldinia eschscholzii EC12 v1.0   12 12
No Yes Apiospora montagnei NRRL 25634 v1.0   12 12
No Yes Magnaporthe poae ATCC 64411 22   8 8
No Yes Magnaporthe grisea 70-15   12 12
No Yes Podospora anserina   11 11
No Yes Sporotrichum thermophile ATCC 42464   12 12
No Yes Thielavia terrestris NRRL 8126   12 12
No Yes Chaetomium globosum CBS 148.51   12 12
No Yes Neurospora tetrasperma   12 12
No Yes Neurospora discreta FGSC 8579   12 12
No Yes Neurospora crassa OR74A   13 13
No Yes Cryphonectria parasitica Chestnut blight fungus 12 12
No Yes Verticillium albo-atrum VaMs.102   10 10
No Yes Verticillium dahliae VdLs.17   12 12
No Yes Acremonium alcalophilumv 1.0   12 12
No Yes Glomerella graminicola 22   12 12
No Yes Fusarium graminearum   12 12
No Yes Nectria haematococca mpVI   12 12
No Yes Fusarium oxysporum f. sp. lycopersici 4286   12 12
No Yes Fusarium verticillioides 7600   12 12
No Yes Trichoderma asperellum CBS 433.97 v1.0   12 12
No Yes Trichoderma atroviride   12 12
No Yes Trichoderma citrinoviride v1.0   12 12
No Yes Trichoderma reesei 1.2   12 12
No Yes Trichoderma virens Gv29-8   12 12
No Yes Trichoderma longibrachiatum ATCC 18648 v1.0   12 12
No Yes Trichoderma harzianum CBS 226.95 v1.0   12 12
No Yes Amorphotheca resinae v1.0 Creosote fungus 12 12
No Yes Botrytis cinerea B05.10   11 11
No Yes Sclerotinia sclerotiorum   11 11
No Yes Blumeria graminis 22   12 12
No Yes Didymella exigua CBS 183.55 v1.0   12 12
No Yes Leptosphaeria maculans 22   12 12
No Yes Setosphaeria turcica v1.0   12 12
No Yes Cochliobolus miyabeanus ATCC 44560 v1.0   12 12
No Yes Cochliobolus victoriae FI3 v1.0   12 12
No Yes Cochliobolus carbonum 26-R-13 v1.0   12 12
No Yes Cochliobolus heterostrophus Southern corn leaf blight pathogen 11 11
No Yes Alternaria brassicicola   11 11
No Yes Cochliobolus lunatus m118 v2.0   12 12
No Yes Pyrenophora teres f. teres 22   12 12
No Yes Pyrenophora tritici-repentis   12 12
No Yes Stagonospora nodorum   12 12
No Yes Mycosphaerella graminicola IPO323   11 11
No Yes Zasmidium cellare ATCC 36951 v1.0   12 12
No Yes Dothistroma septosporum   12 12
No Yes Septoria musiva v1.0   12 12
No Yes Mycosphaerella fijiensis CIRAD86   11 11
No Yes Aureobasidium pullulans var. subglaciale EXF-2481 v1.0   12 12
No Yes Paracoccidioides brasiliensis Pb18   11 11
No Yes Coccidioides posadasii RMSCC 3488   12 12
No Yes Coccidioides immitis RS   12 12
No Yes Ajellomyces dermatitidis SLH14081   12 12
No Yes Histoplasma capsulatum class NAmI strain WU24   9 9
No Yes Microsporum canis CBS 113480   12 12
No Yes Trichophyton equinum CBS 127.97   10 10
No Yes Trichophyton verrucosum HKI 0517   9 9
No Yes Arthroderma benhamiae CBS 112371   8 8
No Yes Trichophyton tonsurans CBS 112818   11 11
No Yes Trichophyton rubrum CBS 118892   12 12
No Yes Uncinocarpus reesii 1704   10 10
No Yes Aspergillus zonatus v1.0   12 12
No Yes Penicillium chrysogenum Wisconsin 54-1255   10 10
No Yes Penicillium chrysogenum v1.0   12 12
No Yes Aspergillus acidus v1.0   12 12
No Yes Aspergillus fumigatus Af293   11 11
No Yes Aspergillus brasiliensis v1.0   12 12
No Yes Aspergillus nidulans FGSC A4   12 12
No Yes Aspergillus sydowii v1.0   12 12
No Yes Aspergillus versicolor v1.0   12 12
No Yes Aspergillus glaucus   12 12
No Yes Aspergillus carbonarius ITEM 5010   12 12
No Yes Neosartorya fischeri NRRL 181   12 12
No Yes Aspergillus terreus NIH2624   11 11
No Yes Aspergillus tubingensis v1.0   12 12
No Yes Aspergillus wentii v1.0   12 12
No Yes Aspergillus oryzae RIB40   10 10
No Yes Aspergillus niger 22   11 11
No Yes Aspergillus niger ATCC 1015   5 5
No Yes Aspergillus flavus NRRL3357   11 11
No Yes Aspergillus clavatus NRRL 1   12 12
No Yes Penicillium marneffei ATCC 18224   12 12
No Yes Tuber melanosporum Mel28 22   12 12
No Yes Tuber melanosporum Vittad Perigord truffle 12 12
No Yes Hansenula polymorpha v2.0   12 11
No Yes Dekkera bruxellensis CBS 2499 v2.0   14 13
No Yes Pichia membranifaciensv1.0   11 11
No Yes Candida tanzawaensis NRRL Y-17324 v1.0   13 13
No Yes Candida dubliniensis CD36   13 13
No Yes Candida tropicalis MYA-3404   14 14
No Yes Candida parapsilosis   12 12
No Yes Candida albicans SC5314   15 15
No Yes Lodderomyces elongisporus NRRL YB-4239   12 12
No Yes Babjeviella inositovora NRRL Y-12698 v1.0   12 12
No Yes Pichia stipitis CBS 6054   13 13
No Yes Candida guilliermondii ATCC 6260   13 13
No Yes Hyphopichia burtonii NRRL Y-1933 v1.0   13 13
No Yes Debaromyces hansenii   12 12
No Yes Wickerhamomyces anomalus   13 13
No Yes Pichia pastoris GS115   14 13
No Yes Hanseniaspora valbyensis NRRL Y-1626 v1.1   9 9
No Yes Yarrowia lipolytica CLIB122   11 11
No Yes Candida lusitaniae ATCC 42720   12 12
No Yes Metschnikowia bicuspidata NRRL YB-4993 v1.0   13 13
No Yes Vanderwaltozyma polyspora DSM 70294   12 12
No Yes Candida glabrata CBS138   14 14
No Yes Kluyveromyces thermotolerans CBS 6340   13 13
No Yes Lachancea kluyveri   13 13
No Yes Kluyveromyces waltii   12 12
No Yes Ashbya gossypii ATCC 10895   12 12
No Yes Zygosaccharomyces rouxii   13 13
No Yes Saccharomyces mikatae MIT   15 15
No Yes Saccharomyces paradoxus MIT   16 16
No Yes Saccharomyces cerevisiae 76 Baker's yeast 16 16
No Yes Saccharomyces bayanus MIT   15 15
No Yes Kluyveromyces lactis   13 13
No Yes Schizosaccharomyces cryophilus OY26 22   12 12
No Yes Schizosaccharomyces octosporus yFS286   12 12
No Yes Schizosaccharomyces japonicus yFS275   12 12
No Yes Schizosaccharomyces pombe Fission yeast 12 12
No Yes Catenaria anguillulae PL171 v1.0   11 11
No Yes Allomyces macrogynus ATCC 38327   19 19
No Yes Spizellomyces punctatus DAOM BR117   13 13
No Yes Dictyostelium discoideum   11 11
No Yes Dictyostelium purpureum   10 10
No Yes Entamoeba dispar 1.2   21 21
No Yes Entamoeba invadens 1.2   28 28
No Yes Entamoeba histolytica 1   23 23
No Yes Selaginella moellendorffii   32 32
No Yes Pinus taeda Loblolly pine 29 29
No Yes Picea abies Norway spruce 18 18
No Yes Eucalyptus grandis v201 Rose gum 57 57
No Yes Theobroma cacao B97-61/B2 v1 Cacao 32 32
No Yes Gossypium raimondii v221   162 162
No Yes Citrus clementina v165   41 41
No Yes Citrus sinensis v154 Sweet orange 72 72
No Yes Thellungiella halophila v173   46 46
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 67 66
No Yes Capsella rubella v183   47 46
No Yes Arabidopsis lyrata Lyrate rockcress 44 44
No Yes Arabidopsis thaliana 10 Thale cress 53 53
No Yes Carica papaya Papaya 27 27
No Yes Medicago truncatula Barrel medic 55 55
No Yes Phaseolus vulgaris v186 French bean 50 50
No Yes Glycine max v109 Soybean 91 91
No Yes Cucumis sativus v122 Cucumber 47 47
No Yes Fragaria vesca Wild strawberry 30 30
No Yes Malus domestica v196 Apple 67 66
No Yes Prunus persica v139 Peach 33 33
No Yes Linum usitatissimum v200 Flax 75 75
No Yes Manihot esculenta v147 Cassava 55 55
No Yes Populus trichocarpa v156 Black cottonwood 56 56
No Yes Vitis vinifera Wine grape 30 30
No Yes Mimulus guttatus v140 Spotted monkey flower 42 42
No Yes Solanum lycopersicum v.2.3 Tomato 38 38
No Yes Solanum tuberosum Potato 35 35
No Yes Actinidia chinensis Hongyang   49 49
No Yes Aquilegia coerulea v195   60 60
No Yes Triticum urartu 22   27 27
No Yes Triticum aestivum 22 Bread wheat 88 88
No Yes Aegilops tauschii 22   32 32
No Yes Brachypodium distachyon Stiff brome 36 36
No Yes Oryza barthii 22 African wild rice 45 45
No Yes Oryza meridionalis 22   50 50
No Yes Oryza glumaepatula 22   50 50
No Yes Oryza glaberrima African rice 36 36
No Yes Oryza punctata 22   48 48
No Yes Oryza nivara 22   53 53
No Yes Oryza brachyantha 22 Malo sina 30 30
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 53 53
No Yes Oryza sativa v193 Rice 53 53
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 56 52
No Yes Panicum virgatum v202 Switchgrass 70 70
No Yes Setaria italica v164 Foxtail millet 38 38
No Yes Zea mays subsp. mays Maize 76 76
No Yes Zea mays v181 Maize 89 86
No Yes Sorghum bicolor Sorghum 39 37
No Yes Musa balbisiana Balbis banana 59 58
No Yes Musa acuminata 22 Wild Malaysian banana 65 62
No Yes Amborella trichopoda 22   27 27
No Yes Physcomitrella patens   28 28
No Yes Coccomyxa subellipsoidea sp. C-169 v2   7 7
No Yes Asterochloris sp. Cgr/DA1pho v1.0   4 4
No Yes Chlorella variabilis sp. NC64A   6 6
No Yes Chlorella vulgaris   7 7
No Yes Volvox carteri f. nagariensis   5 5
No Yes Volvox carteri v199   6 6
No Yes Chlamydomonas reinhardtii 4.0   8 8
No Yes Ostreococcus sp. RCC809   5 5
No Yes Ostreococcus lucimarinus CCE9901   6 6
No Yes Ostreococcus tauri   5 5
No Yes Bathycoccus prasinos   6 6
No Yes Micromonas sp. RCC299   6 6
No Yes Micromonas pusilla CCMP1545 v3.0   8 8
No Yes Cyanidioschyzon merolae strain 10D 22   5 5
No Yes Cyanidioschyzon merolae   5 5
No Yes Porphyridium purpureum 02_2012   7 7
No Yes Thecamonas trahens ATCC 50062   8 8
No Yes Bigelowiella natans CCMP2755 22   12 12
No Yes Giardia lamblia 2.3   1 1
No Yes Cyanophora paradoxa   7 7
No Yes Leishmania mexicana 2.4   6 6
No Yes Leishmania major strain Friedlin   6 6
No Yes Leishmania infantum JPCM5 2.4   6 6
No Yes Leishmania braziliensis MHOM/BR/75/M2904 2.4   6 6
No Yes Trypanosoma vivax   6 6
No Yes Trypanosoma cruzi strain CL Brener   4 4
No Yes Trypanosoma congolense 2.4   7 7
No Yes Trypanosoma brucei gambiense v4.1   5 5
No Yes Trypanosoma brucei TREU927 v4.1   5 5
No Yes Ectocarpus siliculosus   13 13
No Yes Aureococcus anophagefferens   4 4
No Yes Albugo laibachii 22   10 10
No Yes Pythium iwayamai DAOM BR242034 22   9 9
No Yes Pythium arrhenomanes ATCC 12531 22   9 9
No Yes Pythium ultimum v1.7-2   8 8
No Yes Pythium aphanidermatum DAOM BR444 22   8 8
No Yes Pythium irregulare DAOM BR486 22   10 10
No Yes Pythium vexans DAOM BR484 22   9 9
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 9 9
No Yes Phytophthora sojae 1.1   10 10
No Yes Phytophthora infestans T30-4   10 10
No Yes Phytophthora capsici   8 8
No Yes Hyaloperonospora arabidopsidis 22   8 8
No Yes Phaeodactylum tricornutumCCAP 1055/1   6 6
No Yes Fragilariopsis cylindrus   9 9
No Yes Thalassiosira pseudonana CCMP1335   4 4
No Yes Perkinsus marinus ATCC 50983   9 9
No Yes Paramecium tetraurelia   13 13
No Yes Tetrahymena thermophila SB210 1   8 8
No Yes Ichthyophthirius multifiliis strain G5   2 2
No Yes Cryptosporidium hominis   3 3
No Yes Cryptosporidium muris   4 4
No Yes Cryptosporidium parvum Iowa II   4 4
No Yes Neospora caninum   3 3
No Yes Toxoplasma gondii VEG   2 2
No Yes Toxoplasma gondii ME49   2 2
No Yes Toxoplasma gondii GT1   2 2
No Yes Babesia bovis T2Bo   6 6
No Yes Theileria parva   3 3
No Yes Theileria annulata   3 3
No Yes Plasmodium falciparum 3D7   3 3
No Yes Plasmodium vivax SaI-1 7.0   3 3
No Yes Plasmodium knowlesi strain H   3 3
No Yes Plasmodium yoelii ssp. yoelii 1   3 3
No Yes Plasmodium chabaudi   3 3
No Yes Plasmodium berghei ANKA   3 3
No Yes Symbiodinium minutum clade B1 v1.2   9 9
No Yes Naegleria gruberi   7 7
No Yes Trichomonas vaginalis   9 9
No Yes Guillardia theta CCMP2712 v1.0   12 12
No Yes Emiliania huxleyi CCMP1516   11 9
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 51 51
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 30 30
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 21 21
No Yes Ascaris suum Victoria/Ghent Pig roundworm 12 12
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 25 25
No Yes Cryptococcus neoformans var. grubii H99   11 11
No Yes Cryptococcus neoformans B-3501A   11 11
No Yes Cryptococcus neoformans JEC21   10 10
No Yes Paracoccidioides brasiliensis Pb01   12 12
No Yes Paracoccidioides brasiliensis Pb03   9 9
No Yes Coccidioides posadasii str. Silveira   12 12
No Yes Coccidioides immitis RMSCC 3703   11 11
No Yes Coccidioides immitis RMSCC 2394   12 12
No Yes Coccidioides immitis H538.4   10 10
No Yes Ajellomyces dermatitidis ER-3   11 11
No Yes Histoplasma capsulatum H143   10 10
No Yes Histoplasma capsulatum H88   12 12
No Yes Histoplasma capsulatum G186AR   10 10
No Yes Aspergillus fumigatus A1163   11 11
No Yes Candida albicans WO-1   12 12
No Yes Saccharomyces cerevisiae UC5   16 16
No Yes Saccharomyces cerevisiae PW5   14 14
No Yes Saccharomyces cerevisiae FL100   8 8
No Yes Saccharomyces cerevisiae CLIB324   9 9
No Yes Saccharomyces cerevisiae CBS7960   13 13
No Yes Saccharomyces cerevisiae YJM269   10 10
No Yes Saccharomyces cerevisiae T7   16 16
No Yes Saccharomyces cerevisiae FostersB   12 12
No Yes Saccharomyces cerevisiae FostersO   13 13
No Yes Saccharomyces cerevisiae VL3   12 12
No Yes Saccharomyces cerevisiae Vin13   11 11
No Yes Saccharomyces cerevisiae LalvinQA23   13 13
No Yes Saccharomyces cerevisiae AWRI796   14 14
No Yes Saccharomyces cerevisiae Sigma1278b   16 16
No Yes Saccharomyces cerevisiae W303   16 16
No Yes Saccharomyces cerevisiae JAY291   15 15
No Yes Saccharomyces cerevisiae AWRI1631   9 9
No Yes Saccharomyces cerevisiae YPS163   10 10
No Yes Saccharomyces cerevisiae M22   3 3
No Yes Saccharomyces cerevisiae T73   11 11
No Yes Saccharomyces cerevisiae CLIB215   13 13
No Yes Saccharomyces cerevisiae Y10   2 2
No Yes Saccharomyces cerevisiae YJM789   16 16
No Yes Saccharomyces cerevisiae YJM789   16 16
No Yes Saccharomyces cerevisiae RM11-1a   16 16
No Yes Saccharomyces cerevisiae RM11-1a   16 16
No Yes Saccharomyces cerevisiae SGD (SGD) Baker's yeast 16 16
No Yes Schizosaccharomyces pombe 972h-   12 12
No Yes Batrachochytrium dendrobatidis JEL423   12 12
No Yes Batrachochytrium dendrobatidis JAM81   13 13
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 32 32
No Yes Hordeum vulgare 22 Domesticated barley 59 59
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 41 41
No Yes Trypanosoma brucei Lister 427 v4.1   5 5
No Yes Neospora caninum Nc-Liverpool 6.2   3 3
No Yes Plasmodium falciparum HB3   3 3
No Yes Plasmodium falciparum Dd2   2 2
No Yes Homo sapiens 75_37 (old version GRC) Human 187 187
No Yes Homo sapiens (NCBI version) Human 50 50
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 29 29
No Yes Heliconius numata (Incomplete)   3 3
No Yes Loa loa v3.3 (Request) Eye worm 13 13
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 11 11
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 10 10
No Yes Moniliophthora perniciosa FA553 (Genome survey)   5 5
No Yes Encephalitozoon cuniculi (endoparasite)   1 1
No Yes Picea sitchensis (Incomplete) Sitka spruce 3 3
No Yes Lotus japonicus (Early assembly)   43 43
No Yes Malus x domestica (Duplicate) Apple 67 66
No Yes Ricinus communis (Early assembly) Castor bean 30 30
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   72 68
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 38 38
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 38 38
No Yes Phoenix dactylifera (Early draft) Date palm 28 28
No Yes Homo sapiens 69_37 Human 31 31
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 22 22
No Yes Gorilla gorilla 69_3.1 Western gorilla 25 25
No Yes Pongo abelii 69_2 Sumatran orangutan 25 25
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 28 28
No Yes Macaca mulatta 69_1 Rhesus monkey 27 27
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 26 26
No Yes Otolemur garnettii 69_3 Small-eared galago 28 28
No Yes Microcebus murinus 69_1 Gray mouse lemur 22 22
No Yes Rattus norvegicus 69_3.4 Norway rat 28 28
No Yes Mus musculus 69_38 House mouse 29 29
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 22 22
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 22 22
No Yes Cavia porcellus 69_3 Domestic guinea pig 27 27
No Yes Oryctolagus cuniculus 69_2 Rabbit 23 23
No Yes Ochotona princeps 69 American pika 25 24
No Yes Tupaia belangeri 69 Northern tree shrew 24 22
No Yes Sus scrofa 69_10.2 Pig 25 25
No Yes Bos taurus 69_3.1 Cattle 28 28
No Yes Vicugna pacos 69_1 Alpaca 15 15
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 26 26
No Yes Mustela putorius furo 69_1.0 Domestic ferret 25 25
No Yes Ailuropoda melanoleuca 69_1 Giant panda 26 26
No Yes Canis familiaris 69_3.1 Dog 29 29
No Yes Felis catus 69 Domestic cat 18 18
No Yes Equus caballus 69_2 Horse 26 26
No Yes Myotis lucifugus 69_2.0 Little brown bat 28 28
No Yes Pteropus vampyrus 69_1 Large flying fox 25 25
No Yes Sorex araneus 69_1 European shrew 18 17
No Yes Erinaceus europaeus 69 Western European hedgehog 22 22
No Yes Procavia capensis 69_1 Cape rock hyrax 24 24
No Yes Loxodonta africana 69_3 African savanna elephant 29 29
No Yes Echinops telfairi 69 Small Madagascar hedgehog 21 20
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 19 19
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 20 18
No Yes Macropus eugenii 69_1.0 Tammar wallaby 23 22
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 28 28
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 29 29
No Yes Ornithorhynchus anatinus 69_5 Platypus 28 28
No Yes Petromyzon marinus 69_7.0 Sea lamprey 14 14
No Yes Meleagris gallopavo 69_2 Turkey 25 25
No Yes Gallus gallus 69_2 Chicken 26 26
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 26 26
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 25 25
No Yes Anolis carolinensis 69_2.0 Green anole 27 27
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 28 28
No Yes Latimeria chalumnae 69_1 Coelacanth 28 28
No Yes Gadus morhua 69_1 Atlantic cod 40 40
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 42 42
No Yes Takifugu rubripes 69_4 Torafugu 39 39
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 37 37
No Yes Oryzias latipes 69_1 Japanese medaka 33 33
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 38 38
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 40 40
No Yes Danio rerio 69_9 Zebrafish 37 37
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 11 11
No Yes Ciona intestinalis 69 Vase tunicate 14 14
No Yes Drosophila melanogaster 69_5 Fruit fly 14 14
No Yes Caenorhabditis elegans 69_215 Roundworm 15 15
No Yes Saccharomyces cerevisiae 69_4 Baker's yeast 16 16
No Yes Arabidopsis thaliana 10 Thale cress 43 43
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   1 1
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)   1 1
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   1 1
No Yes Dump bottom (Dump bottom) (meta-genome)   1 1
No Yes Dump top (Dump top) (meta-genome)   1 1
No Yes Endophytic microbiome from Rice (meta-genome)   1 1
No Yes Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome)   1 1
No Yes NCBI 2017_08 genome   31417 31393
No Yes Protozoadb 2010_08 (Protozoadb)   208 208
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   3 3
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   2 1
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   1998 1996
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   2 1
No Yes Uniprot 2018_03 genome   27612 27532
No Yes Global Ocean Sampling Expedition (GOS)   10 10
No Yes PDB chains (SCOP 1.75) (PDB)   14 14
No Yes Protein Data Bank (all PDB sequenc)   151 151
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   353 353
No Yes TargetDB (Targets)   65 64

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