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Lipoxigenase superfamily domain assignments
in
Brachypodium distachyon

Assignment details

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Brachypodium distachyon has 11 significant domains in 11 proteins.

     

Sequence ID   Evalue   Region   Family  
EG:BRADI1G09260.1   2.35e-271   168-864   Plant lipoxigenases  
EG:BRADI1G09270.1   2.49e-270   167-863   Plant lipoxigenases  
EG:BRADI1G11670.1   4.97e-272   167-879   Plant lipoxigenases  
EG:BRADI1G11680.1   9.29e-269   164-860   Plant lipoxigenases  
EG:BRADI1G72690.1   1.57e-246   225-920   Plant lipoxigenases  
EG:BRADI3G07000.2   4.84e-260   204-897   Plant lipoxigenases  
EG:BRADI3G07010.1   9.29e-260   204-895   Plant lipoxigenases  
EG:BRADI3G39980.1   6.02e-253   239-934   Plant lipoxigenases  
EG:BRADI3G59710.1   2.22e-238   152-845   Plant lipoxigenases  
EG:BRADI3G59942.1   1.57e-18   87-169   Plant lipoxigenases  
EG:BRADI5G11590.1   7.46e-254   224-915   Plant lipoxigenases  

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View all assignments containing a Lipoxigenase domain in each group of genomes.

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Select to display   Genome       Domains   Proteins
No Yes ALL   17882 17882
No Yes Homo sapiens 76_38 Human 17 17
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 8 8
No Yes Gorilla gorilla 76_3.1 Western gorilla 11 11
No Yes Pongo abelii 76_2 Sumatran orangutan 6 6
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 8 8
No Yes Papio anubis 76 Olive baboon 7 7
No Yes Macaca mulatta 76_1 Rhesus monkey 9 9
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 14 14
No Yes Otolemur garnettii 76_3 Small-eared galago 8 8
No Yes Microcebus murinus 76_1 Gray mouse lemur 11 7
No Yes Rattus norvegicus 76_5.0 Norway rat 7 7
No Yes Mus musculus 76_38 House mouse 12 12
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 12 8
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 8 8
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 5 5
No Yes Cavia porcellus 76_3 Domestic guinea pig 6 6
No Yes Oryctolagus cuniculus 76_2 Rabbit 6 6
No Yes Ochotona princeps 76 American pika 5 5
No Yes Tupaia belangeri 76 Northern tree shrew 13 8
No Yes Sus scrofa 76_10.2 Pig 10 10
No Yes Bos taurus 76_3.1 Cattle 8 8
No Yes Ovis aries 76_3.1 Sheep 7 7
No Yes Vicugna pacos 76_1 Alpaca 3 2
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 4 4
No Yes Mustela putorius furo 76_1.0 Domestic ferret 7 7
No Yes Ailuropoda melanoleuca 76_1 Giant panda 7 7
No Yes Canis familiaris 76_3.1 Dog 7 7
No Yes Felis catus 76_6.2 Domestic cat 5 5
No Yes Equus caballus 76_2 Horse 5 5
No Yes Myotis lucifugus 76_2.0 Little brown bat 19 19
No Yes Pteropus vampyrus 76_1 Large flying fox 6 6
No Yes Sorex araneus 76_1 European shrew 8 5
No Yes Erinaceus europaeus 76 Western European hedgehog 8 5
No Yes Procavia capensis 76_1 Cape rock hyrax 7 5
No Yes Loxodonta africana 76_3 African savanna elephant 7 7
No Yes Echinops telfairi 76 Small Madagascar hedgehog 10 6
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 6 6
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 4 2
No Yes Macropus eugenii 76_1.0 Tammar wallaby 6 5
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 6 6
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 8 7
No Yes Ornithorhynchus anatinus 76_5 Platypus 7 6
No Yes Saccoglossus kowalevskii v3.0   5 5
No Yes Petromyzon marinus 76_7.0 Sea lamprey 7 7
No Yes Meleagris gallopavo 76_2 Turkey 1 1
No Yes Gallus gallus 76_4 Chicken 2 2
No Yes Anas platyrhynchos 76_1.0 Mallard 1 1
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 2 2
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 3 3
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 2 2
No Yes Anolis carolinensis 76_2.0 Green anole 9 9
No Yes Xenopus laevis African clawed frog 3 3
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 5 5
No Yes Latimeria chalumnae 76_1 Coelacanth 2 2
No Yes Lepisosteus oculatus 76 Spotted gar 13 13
No Yes Gadus morhua 76_1 Atlantic cod 17 15
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 3 3
No Yes Takifugu rubripes 76_4 Torafugu 18 17
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 5 5
No Yes Oryzias latipes 76_1 Japanese medaka 17 17
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 7 7
No Yes Poecilia formosa 76 Amazon molly 10 10
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 8 8
No Yes Astyanax mexicanus 76 Mexican tetra 8 8
No Yes Danio rerio 76_9 Zebrafish 11 11
No Yes Oikopleura dioica   2 2
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 6 6
No Yes Ciona intestinalis 76 Vase tunicate 11 11
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 28 23
No Yes Adineta vaga   1 1
No Yes Octopus bimaculoides 280   9 9
No Yes Crassostrea gigas 22 Pacific oyster 14 14
No Yes Lottia gigantea Owl limpet 4 4
No Yes Helobdella robusta   4 3
No Yes Capitella sp. I   4 4
No Yes Strigamia maritima 22   1 1
No Yes Ixodes scapularis (Preliminary) Black-legged tick 1 1
No Yes Hymenolepis microstoma   2 1
No Yes Echinococcus multilocularis   2 1
No Yes Echinococcus granulosus   1 1
No Yes Taenia solium Pork tapeworm 2 1
No Yes Schistosoma mansoni   2 2
No Yes Mnemiopsis leidyi Sea walnut 8 8
No Yes Thelohanellus kitauei   2 2
No Yes Acropora digitifera v1.0   22 22
No Yes Nematostella vectensis 1.0 Starlet sea anemone 13 12
No Yes Hydra vulgaris   10 10
No Yes Amphimedon queenslandica   1 1
No Yes Trichoplax adhaerens   6 5
No Yes Sphaerobolus stellatus v1.0   2 2
No Yes Pleurotus ostreatus Oyster mushroom 3 3
No Yes Hebeloma cylindrosporum h7 v2.0   1 1
No Yes Laccaria bicolor S238N-H82   4 4
No Yes Sebacina vermifera MAFF 305830 v1.0   3 3
No Yes Apiospora montagnei NRRL 25634 v1.0   2 2
No Yes Magnaporthe poae ATCC 64411 22   2 2
No Yes Magnaporthe grisea 70-15   1 1
No Yes Podospora anserina   2 2
No Yes Sporotrichum thermophile ATCC 42464   2 2
No Yes Thielavia terrestris NRRL 8126   1 1
No Yes Chaetomium globosum CBS 148.51   1 1
No Yes Neurospora tetrasperma   1 1
No Yes Neurospora discreta FGSC 8579   1 1
No Yes Neurospora crassa OR74A   1 1
No Yes Cryphonectria parasitica Chestnut blight fungus 1 1
No Yes Fusarium graminearum   1 1
No Yes Nectria haematococca mpVI   3 3
No Yes Fusarium oxysporum f. sp. lycopersici 4286   2 2
No Yes Fusarium verticillioides 7600   3 3
No Yes Trichoderma asperellum CBS 433.97 v1.0   1 1
No Yes Trichoderma atroviride   1 1
No Yes Trichoderma citrinoviride v1.0   1 1
No Yes Trichoderma virens Gv29-8   1 1
No Yes Trichoderma harzianum CBS 226.95 v1.0   1 1
No Yes Botrytis cinerea B05.10   3 3
No Yes Sclerotinia sclerotiorum   2 2
No Yes Didymella exigua CBS 183.55 v1.0   1 1
No Yes Setosphaeria turcica v1.0   3 3
No Yes Cochliobolus heterostrophus Southern corn leaf blight pathogen 1 1
No Yes Mycosphaerella graminicola IPO323   3 3
No Yes Zasmidium cellare ATCC 36951 v1.0   2 2
No Yes Dothistroma septosporum   2 2
No Yes Septoria musiva v1.0   1 1
No Yes Mycosphaerella fijiensis CIRAD86   1 1
No Yes Aureobasidium pullulans var. subglaciale EXF-2481 v1.0   1 1
No Yes Aspergillus fumigatus Af293   2 2
No Yes Aspergillus versicolor v1.0   1 1
No Yes Neosartorya fischeri NRRL 181   2 2
No Yes Aspergillus oryzae RIB40   1 1
No Yes Aspergillus flavus NRRL3357   1 1
No Yes Dictyostelium discoideum   2 2
No Yes Dictyostelium purpureum   2 2
No Yes Selaginella moellendorffii   25 25
No Yes Pinus taeda Loblolly pine 84 73
No Yes Picea abies Norway spruce 33 31
No Yes Eucalyptus grandis v201 Rose gum 24 23
No Yes Theobroma cacao B97-61/B2 v1 Cacao 24 24
No Yes Gossypium raimondii v221   35 34
No Yes Citrus clementina v165   17 17
No Yes Citrus sinensis v154 Sweet orange 37 37
No Yes Thellungiella halophila v173   7 7
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 15 14
No Yes Capsella rubella v183   7 7
No Yes Arabidopsis lyrata Lyrate rockcress 6 6
No Yes Arabidopsis thaliana 10 Thale cress 6 6
No Yes Carica papaya Papaya 19 17
No Yes Medicago truncatula Barrel medic 53 53
No Yes Phaseolus vulgaris v186 French bean 33 33
No Yes Glycine max v109 Soybean 56 55
No Yes Cucumis sativus v122 Cucumber 38 36
No Yes Fragaria vesca Wild strawberry 18 18
No Yes Malus domestica v196 Apple 52 45
No Yes Prunus persica v139 Peach 17 17
No Yes Linum usitatissimum v200 Flax 26 26
No Yes Manihot esculenta v147 Cassava 23 23
No Yes Populus trichocarpa v156 Black cottonwood 24 24
No Yes Vitis vinifera Wine grape 18 15
No Yes Mimulus guttatus v140 Spotted monkey flower 11 11
No Yes Solanum lycopersicum v.2.3 Tomato 30 29
No Yes Solanum tuberosum Potato 37 37
No Yes Actinidia chinensis Hongyang   12 12
No Yes Aquilegia coerulea v195   13 13
No Yes Triticum urartu 22   17 17
No Yes Triticum aestivum 22 Bread wheat 66 64
No Yes Aegilops tauschii 22   23 22
No Yes Brachypodium distachyon Stiff brome 11 11
No Yes Oryza barthii 22 African wild rice 18 18
No Yes Oryza meridionalis 22   16 16
No Yes Oryza glumaepatula 22   20 20
No Yes Oryza glaberrima African rice 17 15
No Yes Oryza punctata 22   16 16
No Yes Oryza nivara 22   23 22
No Yes Oryza brachyantha 22 Malo sina 11 10
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 23 23
No Yes Oryza sativa v193 Rice 23 23
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 23 16
No Yes Panicum virgatum v202 Switchgrass 19 19
No Yes Setaria italica v164 Foxtail millet 15 15
No Yes Zea mays subsp. mays Maize 27 27
No Yes Zea mays v181 Maize 28 28
No Yes Sorghum bicolor Sorghum 14 12
No Yes Musa balbisiana Balbis banana 18 17
No Yes Musa acuminata 22 Wild Malaysian banana 17 17
No Yes Amborella trichopoda 22   13 13
No Yes Physcomitrella patens   11 11
No Yes Coccomyxa subellipsoidea sp. C-169 v2   2 2
No Yes Asterochloris sp. Cgr/DA1pho v1.0   1 1
No Yes Chlorella variabilis sp. NC64A   1 1
No Yes Chlorella vulgaris   2 2
No Yes Volvox carteri f. nagariensis   9 4
No Yes Volvox carteri v199   11 5
No Yes Chlamydomonas reinhardtii 4.0   2 1
No Yes Ostreococcus lucimarinus CCE9901   1 1
No Yes Thecamonas trahens ATCC 50062   1 1
No Yes Bigelowiella natans CCMP2755 22   2 2
No Yes Ectocarpus siliculosus   4 4
No Yes Pythium iwayamai DAOM BR242034 22   5 5
No Yes Pythium arrhenomanes ATCC 12531 22   10 9
No Yes Pythium ultimum v1.7-2   7 7
No Yes Pythium aphanidermatum DAOM BR444 22   5 5
No Yes Pythium irregulare DAOM BR486 22   4 4
No Yes Pythium vexans DAOM BR484 22   3 3
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 3 3
No Yes Phytophthora sojae 1.1   4 4
No Yes Phytophthora infestans T30-4   5 5
No Yes Phytophthora capsici   3 3
No Yes Phaeodactylum tricornutumCCAP 1055/1   1 1
No Yes Fragilariopsis cylindrus   2 2
No Yes Symbiodinium minutum clade B1 v1.2   5 5
No Yes Emiliania huxleyi CCMP1516   17 17
No Yes Leptolyngbya sp. PCC 7376   1 1
No Yes Acaryochloris marina MBIC11017   5 5
No Yes Cyanothece sp. PCC 8802   2 2
No Yes Microcystis aeruginosa NIES-843   1 1
No Yes Rivularia sp. PCC 7116   2 2
No Yes Calothrix sp. PCC 7507   1 1
No Yes 'Nostoc azollae' 0708   1 1
No Yes Nostoc punctiforme PCC 73102   2 2
No Yes Nostoc sp. PCC 7120   1 1
No Yes Nostoc sp. PCC 7524   2 2
No Yes Anabaena sp. 90   1 1
No Yes Rhodopirellula baltica SH 1   1 1
No Yes Corallococcus coralloides DSM 2259   2 2
No Yes Myxococcus xanthus DK 1622   3 3
No Yes Burkholderia thailandensis E264   1 1
No Yes Nitrosospira multiformis ATCC 25196   1 1
No Yes Nitrosomonas europaea ATCC 19718   1 1
No Yes Shewanella denitrificans OS217   1 1
No Yes Shewanella woodyi ATCC 51908   3 3
No Yes Shewanella violacea DSS12   1 1
No Yes Nitrosococcus watsonii C-113   1 1
No Yes Pseudomonas aeruginosa UCBPP-PA14   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 10 10
No Yes Aspergillus fumigatus A1163   2 2
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 24 22
No Yes Hordeum vulgare 22 Domesticated barley 38 38
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 22 20
No Yes Chamaesiphon minutus PCC 6605   1 1
No Yes Crinalium epipsammum PCC 9333   1 1
No Yes Oscillatoria nigro-viridis PCC 7112   1 1
No Yes Oscillatoria acuminata PCC 6304   1 1
No Yes Cyanothece sp. ATCC 51142   2 2
No Yes Cyanothece sp. PCC 8801   2 2
No Yes Calothrix parietina Calothrix sp. PCC 6303   1 1
No Yes Cylindrospermum stagnale PCC 7417   1 1
No Yes Anabaena cylindrica PCC 7122   2 2
No Yes Sorangium cellulosum So0157-2   3 3
No Yes Myxococcus stipitatus DSM 14675   2 2
No Yes Pseudomonas aeruginosa SCV20265   1 1
No Yes Pseudomonas aeruginosa MTB-1   1 1
No Yes Pseudomonas aeruginosa LES431   1 1
No Yes Pseudomonas aeruginosa RP73   1 1
No Yes Pseudomonas aeruginosa B136-33   1 1
No Yes Pseudomonas aeruginosa PA1R   1 1
No Yes Pseudomonas aeruginosa PA1   1 1
No Yes Pseudomonas aeruginosa DK2   1 1
No Yes Pseudomonas aeruginosa NCGM2.S1   1 1
No Yes Pseudomonas aeruginosa M18   1 1
No Yes Pseudomonas aeruginosa LESB58   1 1
No Yes Pseudomonas aeruginosa PA7   1 1
No Yes Pseudomonas aeruginosa PAO1   1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 17 17
No Yes Homo sapiens (NCBI version) Human 11 11
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 7 7
No Yes Lotus japonicus (Early assembly)   41 41
No Yes Malus x domestica (Duplicate) Apple 52 45
No Yes Ricinus communis (Early assembly) Castor bean 12 12
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   32 28
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 30 29
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 30 29
No Yes Phoenix dactylifera (Early draft) Date palm 15 11
No Yes Homo sapiens 69_37 Human 7 7
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 6 6
No Yes Gorilla gorilla 69_3.1 Western gorilla 8 8
No Yes Pongo abelii 69_2 Sumatran orangutan 6 6
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 6 6
No Yes Macaca mulatta 69_1 Rhesus monkey 7 7
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 7 7
No Yes Otolemur garnettii 69_3 Small-eared galago 7 7
No Yes Microcebus murinus 69_1 Gray mouse lemur 11 7
No Yes Rattus norvegicus 69_3.4 Norway rat 7 7
No Yes Mus musculus 69_38 House mouse 7 7
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 12 8
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 7 7
No Yes Cavia porcellus 69_3 Domestic guinea pig 6 6
No Yes Oryctolagus cuniculus 69_2 Rabbit 5 5
No Yes Ochotona princeps 69 American pika 5 5
No Yes Tupaia belangeri 69 Northern tree shrew 13 8
No Yes Sus scrofa 69_10.2 Pig 7 7
No Yes Bos taurus 69_3.1 Cattle 7 7
No Yes Vicugna pacos 69_1 Alpaca 3 2
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 4 4
No Yes Mustela putorius furo 69_1.0 Domestic ferret 7 7
No Yes Ailuropoda melanoleuca 69_1 Giant panda 6 6
No Yes Canis familiaris 69_3.1 Dog 6 6
No Yes Felis catus 69 Domestic cat 8 6
No Yes Equus caballus 69_2 Horse 5 5
No Yes Myotis lucifugus 69_2.0 Little brown bat 19 19
No Yes Pteropus vampyrus 69_1 Large flying fox 6 6
No Yes Sorex araneus 69_1 European shrew 8 5
No Yes Erinaceus europaeus 69 Western European hedgehog 8 5
No Yes Procavia capensis 69_1 Cape rock hyrax 7 5
No Yes Loxodonta africana 69_3 African savanna elephant 6 6
No Yes Echinops telfairi 69 Small Madagascar hedgehog 10 6
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 7 4
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 4 2
No Yes Macropus eugenii 69_1.0 Tammar wallaby 6 5
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 5 5
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 8 7
No Yes Ornithorhynchus anatinus 69_5 Platypus 7 6
No Yes Petromyzon marinus 69_7.0 Sea lamprey 5 5
No Yes Meleagris gallopavo 69_2 Turkey 1 1
No Yes Gallus gallus 69_2 Chicken 2 2
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 2 2
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 2 2
No Yes Anolis carolinensis 69_2.0 Green anole 7 7
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 5 5
No Yes Latimeria chalumnae 69_1 Coelacanth 2 2
No Yes Gadus morhua 69_1 Atlantic cod 8 6
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 3 3
No Yes Takifugu rubripes 69_4 Torafugu 9 8
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 4 4
No Yes Oryzias latipes 69_1 Japanese medaka 12 12
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 7 7
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 8 8
No Yes Danio rerio 69_9 Zebrafish 8 8
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 4 4
No Yes Ciona intestinalis 69 Vase tunicate 10 10
No Yes Arabidopsis thaliana 10 Thale cress 6 6
No Yes Air microbial communities Singapore indoor air filters 2 (meta-genome)   2 2
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome)   1 1
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #3 (meta-genome)   1 1
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   7 7
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   4 4
No Yes Methylotrophic community from Lake Washington sediment Formate enrichment (meta-genome)   2 2
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   1 1
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   1 1
No Yes NCBI 2017_08 genome   6993 6919
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   1 1
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   4 4
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   5 5
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   4 4
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   6 6
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   5 5
No Yes STRING v9.0.5 (STRING)   467 439
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   3 3
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome)   1 1
No Yes Uniprot 2018_03 genome   5243 5095
No Yes Global Ocean Sampling Expedition (GOS)   10 10
No Yes NCBI plasmid sequences (Plasmids)   1 1
No Yes NCBI viral sequences (Viral)   1 1
No Yes PDB chains (SCOP 1.75) (PDB)   14 14
No Yes Protein Data Bank (all PDB sequenc)   100 100
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   292 292
No Yes TargetDB (Targets)   40 40
No Yes UniProt viral sequences (Viral)   1 1

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