SUPERFAMILY 1.75 HMM library and genome assignments server

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Phospholipase A2, PLA2 superfamily domain assignments


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Select to display   Genome       Domains   Proteins
No Yes ALL   27394 27394
No Yes Homo sapiens 76_38 Human 27 24
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 16 14
No Yes Gorilla gorilla 76_3.1 Western gorilla 25 22
No Yes Pongo abelii 76_2 Sumatran orangutan 15 13
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 15 13
No Yes Papio anubis 76 Olive baboon 15 13
No Yes Macaca mulatta 76_1 Rhesus monkey 16 14
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 26 22
No Yes Otolemur garnettii 76_3 Small-eared galago 13 11
No Yes Microcebus murinus 76_1 Gray mouse lemur 15 13
No Yes Rattus norvegicus 76_5.0 Norway rat 14 11
No Yes Mus musculus 76_38 House mouse 37 31
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 15 12
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 14 12
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 15 13
No Yes Cavia porcellus 76_3 Domestic guinea pig 18 16
No Yes Oryctolagus cuniculus 76_2 Rabbit 21 19
No Yes Ochotona princeps 76 American pika 17 15
No Yes Tupaia belangeri 76 Northern tree shrew 14 10
No Yes Sus scrofa 76_10.2 Pig 17 14
No Yes Bos taurus 76_3.1 Cattle 21 19
No Yes Ovis aries 76_3.1 Sheep 20 18
No Yes Vicugna pacos 76_1 Alpaca 11 9
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 12 10
No Yes Mustela putorius furo 76_1.0 Domestic ferret 13 11
No Yes Ailuropoda melanoleuca 76_1 Giant panda 14 12
No Yes Canis familiaris 76_3.1 Dog 17 14
No Yes Felis catus 76_6.2 Domestic cat 14 12
No Yes Equus caballus 76_2 Horse 16 14
No Yes Myotis lucifugus 76_2.0 Little brown bat 21 17
No Yes Pteropus vampyrus 76_1 Large flying fox 14 12
No Yes Sorex araneus 76_1 European shrew 13 11
No Yes Erinaceus europaeus 76 Western European hedgehog 18 16
No Yes Procavia capensis 76_1 Cape rock hyrax 17 13
No Yes Loxodonta africana 76_3 African savanna elephant 21 18
No Yes Echinops telfairi 76 Small Madagascar hedgehog 8 7
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 17 15
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 7 7
No Yes Macropus eugenii 76_1.0 Tammar wallaby 16 13
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 21 18
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 15 13
No Yes Ornithorhynchus anatinus 76_5 Platypus 18 15
No Yes Saccoglossus kowalevskii v3.0   13 13
No Yes Petromyzon marinus 76_7.0 Sea lamprey 8 8
No Yes Meleagris gallopavo 76_2 Turkey 13 12
No Yes Gallus gallus 76_4 Chicken 12 11
No Yes Anas platyrhynchos 76_1.0 Mallard 13 10
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 11 10
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 13 10
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 10 9
No Yes Anolis carolinensis 76_2.0 Green anole 12 11
No Yes Xenopus laevis African clawed frog 7 7
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 13 12
No Yes Latimeria chalumnae 76_1 Coelacanth 13 11
No Yes Lepisosteus oculatus 76 Spotted gar 9 7
No Yes Gadus morhua 76_1 Atlantic cod 17 17
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 10 9
No Yes Takifugu rubripes 76_4 Torafugu 28 24
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 13 13
No Yes Oryzias latipes 76_1 Japanese medaka 12 12
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 11 11
No Yes Poecilia formosa 76 Amazon molly 12 11
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 15 14
No Yes Astyanax mexicanus 76 Mexican tetra 8 8
No Yes Danio rerio 76_9 Zebrafish 13 11
No Yes Oikopleura dioica   149 149
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 3 3
No Yes Ciona intestinalis 76 Vase tunicate 7 7
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 23 22
No Yes Adineta vaga   10 10
No Yes Octopus bimaculoides 280   7 7
No Yes Crassostrea gigas 22 Pacific oyster 12 11
No Yes Lottia gigantea Owl limpet 19 18
No Yes Helobdella robusta   1 1
No Yes Capitella sp. I   4 4
No Yes Danaus plexippus OGS1.0 Monarch butterfly 6 6
No Yes Heliconius melpomene Postman butterfly 5 4
No Yes Bombyx mori Domestic silkworm 11 11
No Yes Nasonia vitripennis Jewel wasp 6 6
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 12 12
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 8 8
No Yes Linepithema humile v1.1 Argentine ant 9 9
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 9 9
No Yes Solenopsis invicta v.2.2.3 Red fire ant 9 9
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 6 6
No Yes Atta cephalotes v1.1   7 7
No Yes Camponotus floridanus v3.3 Florida carpenter ant 8 8
No Yes Lucilia cuprina Australian sheep blowfly 7 7
No Yes Drosophila grimshawi 1.3   7 7
No Yes Drosophila willistoni 1.3   7 7
No Yes Drosophila pseudoobscura 2.13   7 7
No Yes Drosophila persimilis 1.3   7 7
No Yes Drosophila suzukii   7 7
No Yes Drosophila yakuba 1.3   7 7
No Yes Drosophila simulans 1.3   5 5
No Yes Drosophila sechellia 1.3   7 7
No Yes Drosophila melanogaster 76_5 Fruit fly 13 13
No Yes Drosophila erecta 1.3   7 7
No Yes Drosophila ananassae 1.3   8 8
No Yes Drosophila virilis 1.2   7 7
No Yes Drosophila mojavensis 1.3   7 7
No Yes Megaselia scalaris 22   3 3
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 12 12
No Yes Culex pipiens quinquefasciatus Southern house mosquito 10 9
No Yes Anopheles darlingi 22 American malaria mosquito 4 4
No Yes Anopheles gambiae 49_3j African malaria mosquito 8 8
No Yes Tribolium castaneum 3.0 Red flour beetle 10 9
No Yes Pediculus humanus corporis (Early assembly) Human body louse 5 4
No Yes Acyrthosiphon pisum Pea aphid 2 2
No Yes Rhodnius prolixus 22   5 5
No Yes Daphnia pulex Common water flea 11 11
No Yes Strigamia maritima 22   14 11
No Yes Sarcoptes scabiei   6 6
No Yes Tetranychus urticae Two-spotted spider mite 8 8
No Yes Ixodes scapularis (Preliminary) Black-legged tick 16 16
No Yes Pristionchus pacificus   8 8
No Yes Meloidogyne incognita Southern root-knot nematode 23 23
No Yes Meloidogyne hapla   10 10
No Yes Onchocerca volvulus 22   5 5
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 2 2
No Yes Caenorhabditis japonica   10 10
No Yes Caenorhabditis brenneri   9 9
No Yes Caenorhabditis remanei   17 17
No Yes Caenorhabditis elegans 76_235 Roundworm 10 10
No Yes Caenorhabditis briggsae 2   11 11
No Yes Trichinella spiralis 22   4 4
No Yes Mnemiopsis leidyi Sea walnut 1 1
No Yes Acropora digitifera v1.0   10 10
No Yes Nematostella vectensis 1.0 Starlet sea anemone 19 18
No Yes Hydra vulgaris   10 10
No Yes Trichoplax adhaerens   6 6
No Yes Capsaspora owczarzaki ATCC 30864   2 2
No Yes Magnaporthe poae ATCC 64411 22   3 3
No Yes Magnaporthe grisea 70-15   2 2
No Yes Podospora anserina   3 3
No Yes Sporotrichum thermophile ATCC 42464   1 1
No Yes Thielavia terrestris NRRL 8126   1 1
No Yes Chaetomium globosum CBS 148.51   1 1
No Yes Neurospora tetrasperma   2 2
No Yes Neurospora discreta FGSC 8579   2 2
No Yes Neurospora crassa OR74A   2 2
No Yes Verticillium albo-atrum VaMs.102   2 2
No Yes Verticillium dahliae VdLs.17   2 2
No Yes Acremonium alcalophilumv 1.0   2 2
No Yes Fusarium graminearum   1 1
No Yes Nectria haematococca mpVI   1 1
No Yes Fusarium oxysporum f. sp. lycopersici 4286   1 1
No Yes Fusarium verticillioides 7600   1 1
No Yes Trichoderma asperellum CBS 433.97 v1.0   1 1
No Yes Trichoderma atroviride   2 2
No Yes Trichoderma citrinoviride v1.0   1 1
No Yes Trichoderma reesei 1.2   1 1
No Yes Trichoderma virens Gv29-8   1 1
No Yes Trichoderma longibrachiatum ATCC 18648 v1.0   1 1
No Yes Trichoderma harzianum CBS 226.95 v1.0   1 1
No Yes Leptosphaeria maculans 22   1 1
No Yes Alternaria brassicicola   2 2
No Yes Pyrenophora teres f. teres 22   1 1
No Yes Pyrenophora tritici-repentis   1 1
No Yes Stagonospora nodorum   2 2
No Yes Mycosphaerella graminicola IPO323   2 2
No Yes Zasmidium cellare ATCC 36951 v1.0   1 1
No Yes Septoria musiva v1.0   1 1
No Yes Coccidioides posadasii RMSCC 3488   1 1
No Yes Coccidioides immitis RS   1 1
No Yes Ajellomyces dermatitidis SLH14081   1 1
No Yes Histoplasma capsulatum class NAmI strain WU24   1 1
No Yes Microsporum canis CBS 113480   1 1
No Yes Trichophyton equinum CBS 127.97   1 1
No Yes Trichophyton verrucosum HKI 0517   1 1
No Yes Arthroderma benhamiae CBS 112371   1 1
No Yes Trichophyton tonsurans CBS 112818   1 1
No Yes Trichophyton rubrum CBS 118892   1 1
No Yes Uncinocarpus reesii 1704   1 1
No Yes Aspergillus terreus NIH2624   1 1
No Yes Aspergillus oryzae RIB40   2 2
No Yes Aspergillus flavus NRRL3357   3 3
No Yes Tuber melanosporum Mel28 22   1 1
No Yes Tuber melanosporum Vittad Perigord truffle 1 1
No Yes Spizellomyces punctatus DAOM BR117   1 1
No Yes Entamoeba invadens 1.2   1 1
No Yes Selaginella moellendorffii   2 2
No Yes Pinus taeda Loblolly pine 9 9
No Yes Picea abies Norway spruce 6 6
No Yes Eucalyptus grandis v201 Rose gum 9 9
No Yes Theobroma cacao B97-61/B2 v1 Cacao 3 3
No Yes Gossypium raimondii v221   10 10
No Yes Citrus clementina v165   12 12
No Yes Citrus sinensis v154 Sweet orange 12 12
No Yes Thellungiella halophila v173   6 6
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 7 7
No Yes Capsella rubella v183   4 4
No Yes Arabidopsis lyrata Lyrate rockcress 5 5
No Yes Arabidopsis thaliana 10 Thale cress 7 7
No Yes Carica papaya Papaya 2 2
No Yes Medicago truncatula Barrel medic 10 10
No Yes Phaseolus vulgaris v186 French bean 6 6
No Yes Glycine max v109 Soybean 10 10
No Yes Cucumis sativus v122 Cucumber 3 3
No Yes Fragaria vesca Wild strawberry 3 3
No Yes Malus domestica v196 Apple 7 7
No Yes Prunus persica v139 Peach 3 3
No Yes Linum usitatissimum v200 Flax 5 5
No Yes Manihot esculenta v147 Cassava 4 4
No Yes Populus trichocarpa v156 Black cottonwood 5 5
No Yes Vitis vinifera Wine grape 3 3
No Yes Mimulus guttatus v140 Spotted monkey flower 7 7
No Yes Solanum lycopersicum v.2.3 Tomato 2 2
No Yes Solanum tuberosum Potato 5 5
No Yes Actinidia chinensis Hongyang   2 2
No Yes Aquilegia coerulea v195   3 3
No Yes Triticum urartu 22   6 6
No Yes Triticum aestivum 22 Bread wheat 11 11
No Yes Aegilops tauschii 22   3 3
No Yes Brachypodium distachyon Stiff brome 5 5
No Yes Oryza barthii 22 African wild rice 2 2
No Yes Oryza meridionalis 22   5 5
No Yes Oryza glumaepatula 22   4 4
No Yes Oryza glaberrima African rice 3 3
No Yes Oryza punctata 22   3 3
No Yes Oryza nivara 22   5 5
No Yes Oryza brachyantha 22 Malo sina 4 4
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 4 4
No Yes Oryza sativa v193 Rice 4 4
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 3 3
No Yes Panicum virgatum v202 Switchgrass 10 10
No Yes Setaria italica v164 Foxtail millet 6 6
No Yes Zea mays subsp. mays Maize 8 8
No Yes Zea mays v181 Maize 9 9
No Yes Sorghum bicolor Sorghum 5 5
No Yes Musa balbisiana Balbis banana 3 3
No Yes Musa acuminata 22 Wild Malaysian banana 5 5
No Yes Amborella trichopoda 22   3 3
No Yes Physcomitrella patens   4 4
No Yes Chlorella variabilis sp. NC64A   3 3
No Yes Volvox carteri f. nagariensis   1 1
No Yes Volvox carteri v199   1 1
No Yes Chlamydomonas reinhardtii 4.0   1 1
No Yes Micromonas sp. RCC299   1 1
No Yes Micromonas pusilla CCMP1545 v3.0   1 1
No Yes Porphyridium purpureum 02_2012   1 1
No Yes Thecamonas trahens ATCC 50062   1 1
No Yes Bigelowiella natans CCMP2755 22   1 1
No Yes Cyanophora paradoxa   1 1
No Yes Albugo laibachii 22   1 1
No Yes Pythium iwayamai DAOM BR242034 22   1 1
No Yes Pythium arrhenomanes ATCC 12531 22   1 1
No Yes Pythium ultimum v1.7-2   1 1
No Yes Pythium aphanidermatum DAOM BR444 22   1 1
No Yes Pythium irregulare DAOM BR486 22   1 1
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 1 1
No Yes Phytophthora sojae 1.1   1 1
No Yes Phytophthora infestans T30-4   2 2
No Yes Phytophthora capsici   1 1
No Yes Fragilariopsis cylindrus   2 2
No Yes Thalassiosira pseudonana CCMP1335   1 1
No Yes Symbiodinium minutum clade B1 v1.2   1 1
No Yes Naegleria gruberi   5 5
No Yes Guillardia theta CCMP2712 v1.0   1 1
No Yes Emiliania huxleyi CCMP1516   1 1
No Yes Nakamurella multipartita DSM 44233   1 1
No Yes Frankia sp. EAN1pec   1 1
No Yes Streptomyces coelicolor A3(2)   2 2
No Yes Streptomyces griseus subsp. griseus NBRC 13350   1 1
No Yes Streptomyces bingchenggensis BCW-1   1 1
No Yes Streptomyces violaceusniger Tu 4113   1 1
No Yes Streptomyces avermitilis MA-4680   1 1
No Yes Actinosynnema mirum DSM 43827   2 2
No Yes Saccharomonospora viridis DSM 43017   1 1
No Yes Saccharopolyspora erythraea NRRL 2338   1 1
No Yes Amycolatopsis mediterranei U32   2 2
No Yes Verrucosispora maris AB-18-032   1 1
No Yes Micromonospora sp. L5   1 1
No Yes Micromonospora aurantiaca ATCC 27029   1 1
No Yes Actinoplanes sp. N902-109   2 2
No Yes Actinoplanes sp. SE50/110   2 2
No Yes Actinoplanes missouriensis 431   1 1
No Yes Tsukamurella paurometabola DSM 20162   1 1
No Yes Gordonia sp. KTR9   1 1
No Yes Gordonia polyisoprenivorans VH2   1 1
No Yes Gordonia bronchialis DSM 43247   1 1
No Yes Rhodococcus jostii RHA1   1 1
No Yes Rhodococcus equi 103S   1 1
No Yes Rhodococcus opacus B4   1 1
No Yes Rhodococcus erythropolis PR4   1 1
No Yes Nocardia cyriacigeorgica GUH-2   1 1
No Yes Nocardia farcinica IFM 10152   1 1
No Yes Amycolicicoccus subflavus DQS3-9A1   1 1
No Yes Arthrobacter arilaitensis Re117   1 1
No Yes Arcanobacterium haemolyticum DSM 20595   1 1
No Yes Deinococcus gobiensis I-0   1 1
No Yes Deinococcus deserti VCD115   1 1
No Yes Deinococcus maricopensis DSM 21211   4 4
No Yes Deinococcus geothermalis DSM 11300   1 1
No Yes Deinococcus proteolyticus MRP   1 1
No Yes Meiothermus silvanus DSM 9946   1 1
No Yes Meiothermus ruber DSM 1279   1 1
No Yes Thermus sp. CCB_US3_UF1   1 1
No Yes Anaerococcus prevotii DSM 20548   1 1
No Yes Lactobacillus casei ATCC 334   1 1
No Yes Streptococcus pseudopneumoniae IS7493   1 1
No Yes Streptococcus equi subsp. equi 4047   2 2
No Yes Bacillus clausii KSM-K16   1 1
No Yes Coraliomargarita akajimensis DSM 45221   1 1
No Yes Bacteriovorax marinus SJ   1 1
No Yes Bdellovibrio bacteriovorus HD100   1 1
No Yes Desulfarculus baarsii DSM 2075   1 1
No Yes Desulfovibrio africanus str. Walvis Bay   1 1
No Yes Geobacter uraniireducens Rf4   1 1
No Yes Hyphomonas neptunium ATCC 15444   1 1
No Yes Phaeobacter gallaeciensis 2.10   1 1
No Yes Ruegeria pomeroyi DSS-3   1 1
No Yes Methylobacterium chloromethanicum CM4   4 4
No Yes Methylobacterium extorquens AM1   2 2
No Yes Methylobacterium sp. 4-46   4 4
No Yes Methylobacterium populi BJ001   2 2
No Yes Methylobacterium nodulans ORS 2060   2 2
No Yes Methylobacterium radiotolerans JCM 2831   5 5
No Yes Mesorhizobium opportunistum WSM2075   1 1
No Yes Mesorhizobium ciceri biovar biserrulae WSM1271   1 1
No Yes Mesorhizobium loti MAFF303099   1 1
No Yes Saccharophagus degradans 2-40   1 1
No Yes Teredinibacter turnerae T7901   1 1
No Yes Cellvibrio japonicus Ueda107   1 1
No Yes Colwellia psychrerythraea 34H   1 1
No Yes Hahella chejuensis KCTC 2396   1 1
No Yes Methylomonas methanica MC09   1 1
No Yes Thiocystis violascens DSM 198   1 1
No Yes Nitrosococcus watsonii C-113   1 1
No Yes Nitrosococcus oceani ATCC 19707   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 15 15
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 12 12
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 8 8
No Yes Ascaris suum Victoria/Ghent Pig roundworm 8 8
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 10 10
No Yes Coccidioides posadasii str. Silveira   1 1
No Yes Coccidioides immitis RMSCC 3703   1 1
No Yes Coccidioides immitis RMSCC 2394   1 1
No Yes Coccidioides immitis H538.4   1 1
No Yes Ajellomyces dermatitidis ER-3   1 1
No Yes Histoplasma capsulatum H143   1 1
No Yes Histoplasma capsulatum H88   1 1
No Yes Histoplasma capsulatum G186AR   1 1
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 3 3
No Yes Hordeum vulgare 22 Domesticated barley 10 10
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 5 5
No Yes Streptomyces rapamycinicus NRRL 5491   1 1
No Yes Streptomyces davawensis JCM 4913   1 1
No Yes Streptomyces fulvissimus DSM 40593   1 1
No Yes Streptomyces collinus Tu 365   1 1
No Yes Saccharothrix espanaensis DSM 44229   3 3
No Yes Amycolatopsis mediterranei RB   2 2
No Yes Amycolatopsis mediterranei S699   2 2
No Yes Amycolatopsis mediterranei S699   2 2
No Yes Amycolatopsis orientalis HCCB10007   1 1
No Yes Actinoplanes friuliensis DSM 7358   1 1
No Yes Rhodococcus pyridinivorans SB3094   1 1
No Yes Rhodococcus erythropolis CCM2595   1 1
No Yes Nocardia brasiliensis ATCC 700358   3 3
No Yes Corynebacterium glutamicum MB001   1 1
No Yes Corynebacterium glutamicum ATCC 13032   1 1
No Yes Corynebacterium glutamicum ATCC 13032   1 1
No Yes Corynebacterium glutamicum ATCC 13032   1 1
No Yes Lactobacillus paracasei subsp. paracasei 8700:2   1 1
No Yes Lactobacillus casei LOCK919   1 1
No Yes Lactobacillus casei W56   1 1
No Yes Lactobacillus casei LC2W   1 1
No Yes Lactobacillus casei BD-II   1 1
No Yes Lactobacillus casei BL23   1 1
No Yes Lactobacillus casei str. Zhang   1 1
No Yes Streptococcus equi subsp. zooepidemicus ATCC 35246   1 1
No Yes Streptococcus equi subsp. zooepidemicus MGCS10565   1 1
No Yes Streptococcus equi subsp. zooepidemicus   1 1
No Yes Streptococcus pyogenes MGAS1882   1 1
No Yes Streptococcus pyogenes MGAS10270   1 1
No Yes Streptococcus pyogenes MGAS6180   1 1
No Yes Streptococcus pyogenes MGAS10394   1 1
No Yes Streptococcus pyogenes MGAS315   1 1
No Yes Streptococcus pyogenes SSI-1   1 1
No Yes Bacillus thuringiensis serovar konkukian str. 97-27   1 1
No Yes Bdellovibrio bacteriovorus str. Tiberius   1 1
No Yes Desulfocapsa sulfexigens DSM 10523   1 1
No Yes Myxococcus stipitatus DSM 14675   1 1
No Yes Burkholderia cepacia GG4   1 1
No Yes Phaeobacter gallaeciensis DSM 26640   1 1
No Yes Methylobacterium extorquens DM4   3 3
No Yes Methylobacterium extorquens PA1   4 4
No Yes Mesorhizobium australicum WSM2073   1 1
No Yes Simiduia agarivorans SA1 = DSM 21679   1 1
No Yes Mannheimia haemolytica USMARC_2286   3 3
No Yes Mannheimia haemolytica M42548   1 1
No Yes Mannheimia haemolytica D174   2 2
No Yes Mannheimia haemolytica D153   3 3
No Yes Mannheimia haemolytica USDA-ARS-USMARC-183   1 1
No Yes Salmonella enterica subsp. enterica serovar Agona str. 24249   1 1
No Yes Salmonella enterica subsp. enterica serovar Agona str. SL483   1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 29 24
No Yes Homo sapiens (NCBI version) Human 19 17
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 13 11
No Yes Heliconius numata (Incomplete)   3 3
No Yes Loa loa v3.3 (Request) Eye worm 4 4
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 4 4
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 1 1
No Yes Lotus japonicus (Early assembly)   4 4
No Yes Malus x domestica (Duplicate) Apple 7 7
No Yes Ricinus communis (Early assembly) Castor bean 3 3
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   4 4
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 2 2
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 2 2
No Yes Homo sapiens 69_37 Human 17 14
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 15 13
No Yes Gorilla gorilla 69_3.1 Western gorilla 22 20
No Yes Pongo abelii 69_2 Sumatran orangutan 15 13
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 14 12
No Yes Macaca mulatta 69_1 Rhesus monkey 15 13
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 17 15
No Yes Otolemur garnettii 69_3 Small-eared galago 13 11
No Yes Microcebus murinus 69_1 Gray mouse lemur 15 13
No Yes Rattus norvegicus 69_3.4 Norway rat 12 10
No Yes Mus musculus 69_38 House mouse 13 11
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 15 12
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 14 12
No Yes Cavia porcellus 69_3 Domestic guinea pig 18 16
No Yes Oryctolagus cuniculus 69_2 Rabbit 18 16
No Yes Ochotona princeps 69 American pika 17 15
No Yes Tupaia belangeri 69 Northern tree shrew 14 10
No Yes Sus scrofa 69_10.2 Pig 16 13
No Yes Bos taurus 69_3.1 Cattle 20 18
No Yes Vicugna pacos 69_1 Alpaca 11 9
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 12 10
No Yes Mustela putorius furo 69_1.0 Domestic ferret 13 11
No Yes Ailuropoda melanoleuca 69_1 Giant panda 14 12
No Yes Canis familiaris 69_3.1 Dog 13 11
No Yes Felis catus 69 Domestic cat 14 11
No Yes Equus caballus 69_2 Horse 16 14
No Yes Myotis lucifugus 69_2.0 Little brown bat 17 15
No Yes Pteropus vampyrus 69_1 Large flying fox 14 12
No Yes Sorex araneus 69_1 European shrew 13 11
No Yes Erinaceus europaeus 69 Western European hedgehog 18 16
No Yes Procavia capensis 69_1 Cape rock hyrax 17 13
No Yes Loxodonta africana 69_3 African savanna elephant 18 16
No Yes Echinops telfairi 69 Small Madagascar hedgehog 8 7
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 12 10
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 7 7
No Yes Macropus eugenii 69_1.0 Tammar wallaby 16 13
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 15 14
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 15 13
No Yes Ornithorhynchus anatinus 69_5 Platypus 15 13
No Yes Petromyzon marinus 69_7.0 Sea lamprey 8 8
No Yes Meleagris gallopavo 69_2 Turkey 11 10
No Yes Gallus gallus 69_2 Chicken 11 10
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 10 9
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 10 9
No Yes Anolis carolinensis 69_2.0 Green anole 11 10
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 12 11
No Yes Latimeria chalumnae 69_1 Coelacanth 12 10
No Yes Gadus morhua 69_1 Atlantic cod 13 13
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 10 9
No Yes Takifugu rubripes 69_4 Torafugu 10 9
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 9 9
No Yes Oryzias latipes 69_1 Japanese medaka 9 9
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 11 11
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 11 10
No Yes Danio rerio 69_9 Zebrafish 11 9
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 3 3
No Yes Ciona intestinalis 69 Vase tunicate 7 7
No Yes Drosophila melanogaster 69_5 Fruit fly 7 7
No Yes Caenorhabditis elegans 69_215 Roundworm 10 10
No Yes Arabidopsis thaliana 10 Thale cress 5 5
No Yes 5_050719P (meta-genome)   1 1
No Yes Dump bottom (Dump bottom) (meta-genome)   1 1
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #1 (meta-genome)   1 1
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   1 1
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   2 2
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   1 1
No Yes NCBI 2017_08 genome   11050 10550
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   1 1
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   3 3
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   4 4
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   6 6
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   7 7
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   721 677
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   1 1
No Yes Uniprot 2018_03 genome   8423 8120
No Yes Global Ocean Sampling Expedition (GOS)   19 17
No Yes NCBI plasmid sequences (Plasmids)   7 7
No Yes NCBI viral sequences (Viral)   6 6
No Yes PDB chains (SCOP 1.75) (PDB)   86 86
No Yes Protein Data Bank (all PDB sequenc)   525 525
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   1465 1465
No Yes TargetDB (Targets)   16 16
No Yes The Salmonella enterica Pan-genome (meta-genome)   1 1
No Yes UniProt viral sequences (Viral)   3 3

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